[ { "uniprot_canonical_ac": "F1Q5H9-1", "uniprot_id": "F1Q5H9_DANRE", "mass": 56395.0, "length": 508, "protein_name": "Fibroblast growth factor receptor substrate 2b", "gene_name": "frs2b", "organism": "Zebrafish", "refseq_name": "fibroblast growth factor receptor substrate 2b", "refseq_ac": "NP_001002658", "gene_names_uniprotkb": "frs2b; frs2; wu:fd21h10; zgc:91973", "gene_names_refseq": "frs2b; frs2; wu:fd21h10; zgc:91973", "protein_names_uniprotkb": "Fibroblast growth factor receptor substrate 2b", "protein_names_refseq": "fibroblast growth factor receptor substrate 2b; fibroblast growth factor receptor substrate 2", "tax_id": 7955, "disease": "renal cell carcinoma (Disease Ontology:DOID:4450)", "pathway": " (dre:436931); (R-DRE-109704); (R-DRE-1257604); (R-DRE-170968); (R-DRE-5654689); (R-DRE-5654693); (R-DRE-5654695); (R-DRE-5654700); (R-DRE-5654706); (R-DRE-5654710); (R-DRE-5654712); (R-DRE-5654720); (R-DRE-5654726); (R-DRE-5654727); (R-DRE-5654732); (R-DRE-5654733); (R-DRE-5673001); (R-DRE-6811558); (R-DRE-8853659); (R-DRE-9696270); (R-DRE-9696273)", "pathway_count": 21, "publication_count": 3, "publication_id_list": "16109975;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076548.1, GFIL01010818.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA4476728 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1, CN502662.1 and BC076548.1. On or before Dec 5, 2015 this sequence version replaced XP_005163226.1, NP_001002658.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N131", "ec_number_list": "", "go_molecular_function": "GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity;GO:0005104 fibroblast growth factor receptor binding", "go_cellular_component": "GO:0005911 cell-cell junction;GO:0016020 membrane", "go_biological_process": "GO:0008543 fibroblast growth factor receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1Q5H9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5I4-1", "uniprot_id": "F1Q5I4_DANRE", "mass": 28800.0, "length": 266, "protein_name": "pancreatic elastase II", "gene_name": "ela2", "organism": "Zebrafish", "refseq_name": "elastase 2 precursor", "refseq_ac": "NP_001132936", "gene_names_uniprotkb": "ela2", "gene_names_refseq": "ela2", "protein_names_uniprotkb": "pancreatic elastase II; 3.4.21.71", "protein_names_refseq": "elastase 2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:403061)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "21998168;22273551;26298234;26745302;27189481;29422865;31545209;32480235;34725363;39036955", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC042328.1, EH483772.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CF102680.1 and CD014769.1. On Nov 16, 2008 this sequence version replaced XP_001923718.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJM4", "ec_number_list": "", "go_molecular_function": "GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis;GO:1901143 insulin catabolic process;GO:0090330 regulation of platelet aggregation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1Q5I4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5K6-1", "uniprot_id": "F1Q5K6_DANRE", "mass": 77705.0, "length": 710, "protein_name": "ATP-binding cassette sub-family B member 10, mitochondrial", "gene_name": "abcb10", "organism": "Zebrafish", "refseq_name": "ATP-binding cassette sub-family B member 10, mitochondrial isoform X1", "refseq_ac": "XP_001343218", "gene_names_uniprotkb": "abcb10", "gene_names_refseq": "abcb10", "protein_names_uniprotkb": "ATP-binding cassette sub-family B member 10, mitochondrial; ABC-mitochondrial erythroid protein; ATP-binding cassette transporter 10", "protein_names_refseq": "ATP-binding cassette sub-family B member 10, mitochondrial isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100003744)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001343218.2. COMPLETENESS: full length., [RefSeq]; ATP-dependent transporter located in the mitochondrial inner membrane that catalyzes the export of biliverdin from the mitochondrial matrix, and plays a crucial role in hemoglobin synthesis and antioxidative stress. Participates in the early step of the heme biosynthetic process during insertion of iron into protoporphyrin IX (PPIX). Involved in the stabilization of the iron transporter mitoferrin-1/SLC25A37. In addition may be involved in mitochondrial unfolded protein response (UPRmt) signaling pathway, although ABCB10 probably does not participate in peptide export from mitochondria., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q250", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity;GO:0015421 ABC-type oligopeptide transporter activity", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0030218 erythrocyte differentiation;GO:0046985 positive regulation of hemoglobin biosynthetic process;GO:0090374 oligopeptide export from mitochondrion;GO:0070455 positive regulation of heme biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q5K6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5K8-1", "uniprot_id": "F1Q5K8_DANRE", "mass": 40151.0, "length": 357, "protein_name": "Potassium channel subfamily K member", "gene_name": "kcnk15", "organism": "Zebrafish", "refseq_name": "potassium channel subfamily K member 15", "refseq_ac": "NP_001104701", "gene_names_uniprotkb": "kcnk15; zgc:171568", "gene_names_refseq": "kcnk15; zgc:171568", "protein_names_uniprotkb": "Potassium channel subfamily K member", "protein_names_refseq": "potassium channel subfamily K member 15", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-5576886)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01013811.1, BC171631.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On or before Aug 4, 2025 this sequence version replaced XP_005161945.1, NP_001104701.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B910", "ec_number_list": "", "go_molecular_function": "GO:0022841 potassium ion leak channel activity;GO:0005267 potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q5K8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5L3-1", "uniprot_id": "F1Q5L3_DANRE", "mass": 106437.0, "length": 958, "protein_name": "Splicing factor, suppressor of white-apricot homolog", "gene_name": "sfswap", "organism": "Zebrafish", "refseq_name": "splicing factor, suppressor of white-apricot homolog", "refseq_ac": "NP_957462", "gene_names_uniprotkb": "sfswap; sfrs8; srsf8; zgc:56184", "gene_names_refseq": "sfrs8; sfswap; srsf8; zgc:56184", "protein_names_uniprotkb": "Splicing factor, suppressor of white-apricot homolog; Splicing factor, arginine/serine-rich 8; Suppressor of white apricot protein homolog", "protein_names_refseq": "serine/arginine-rich splicing factor 8; splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila); splicing factor, suppressor of white-apricot family; splicing factor, suppressor of white-apricot homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:394143)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "15520368;28871129;29180615", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01035000.1, SRR32588728.46944485.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On Aug 18, 2010 this sequence version replaced NP_957462.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7V040", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0000395 mRNA 5'-splice site recognition;GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1Q5L3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5L5-1", "uniprot_id": "F1Q5L5_DANRE", "mass": 12588.0, "length": 113, "protein_name": "Dynein light chain Tctex-type 1", "gene_name": "dynlt1b", "organism": "Zebrafish", "refseq_name": "dynein light chain Tctex-type 1", "refseq_ac": "NP_001129255", "gene_names_uniprotkb": "dynlt1b; dynlt1; si:ch211-222h17.6; si:ch211-51e12.3", "gene_names_refseq": "dynlt1b; dynlt1; si:ch211-222h17.6; si:ch211-51e12.3", "protein_names_uniprotkb": "Dynein light chain Tctex-type 1", "protein_names_refseq": "dynein light chain Tctex-type 1", "tax_id": 7955, "disease": "", "pathway": " (dre:565740); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.50207879.1, SRR32588720.914733.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505384 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000004.1. On Oct 11, 2008 this sequence version replaced XP_694105.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIL8", "ec_number_list": "", "go_molecular_function": "GO:0045505 dynein intermediate chain binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005868 cytoplasmic dynein complex", "go_biological_process": "GO:0007018 microtubule-based movement", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1Q5L5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5L7-1", "uniprot_id": "F1Q5L7_DANRE", "mass": 67647.0, "length": 596, "protein_name": "Leiomodin-2", "gene_name": "lmod2b", "organism": "Zebrafish", "refseq_name": "leiomodin-2", "refseq_ac": "XP_005164550", "gene_names_uniprotkb": "lmod2b", "gene_names_refseq": "lmod2b", "protein_names_uniprotkb": "Leiomodin-2; Cardiac leiomodin", "protein_names_refseq": "leiomodin-2", "tax_id": 7955, "disease": "dilated cardiomyopathy 2G (Disease Ontology:DOID:0081163); dilated cardiomyopathy (Disease Ontology:DOID:12930)", "pathway": " (dre:664708)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Mediates nucleation of actin filaments and thereby promotes actin polymerization. Plays a role in the regulation of actin filament length. Required for normal sarcomere organization in the heart, and for normal heart function., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BBV5", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding;GO:0005523 tropomyosin binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005865 striated muscle thin filament;GO:0031430 M band;GO:0030016 myofibril", "go_biological_process": "GO:0006936 muscle contraction;GO:0007015 actin filament organization;GO:0051694 pointed-end actin filament capping;GO:0030239 myofibril assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q5L7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5Q3-1", "uniprot_id": "F1Q5Q3_DANRE", "mass": 43221.0, "length": 392, "protein_name": "SERPINE1 mRNA-binding protein 1 isoform X1", "gene_name": "serbp1a", "organism": "Zebrafish", "refseq_name": "SERPINE1 mRNA-binding protein 1 isoform X1", "refseq_ac": "XP_009300781", "gene_names_uniprotkb": "serbp1a; PAI-RBP1; hm:zeh0245; serbp1; wu:fa12d05; wu:fb36e07; wu:fc16f12; wu:fj13e12; zgc:55489", "gene_names_refseq": "PAI-RBP1; hm:zeh0245; serbp1a; serbp1; wu:fa12d05; wu:fb36e07; wu:fc16f12; wu:fj13e12; zgc:55489", "protein_names_uniprotkb": "SERPINE1 mRNA-binding protein 1 isoform X1", "protein_names_refseq": "SERPINE1 mRNA-binding protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ATG7", "ec_number_list": "", "go_molecular_function": "GO:0003730 mRNA 3'-UTR binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006417 regulation of translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q5Q3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5S2-1", "uniprot_id": "F1Q5S2_DANRE", "mass": 47249.0, "length": 426, "protein_name": "Protein Z, vitamin K-dependent plasma glycoprotein a precursor", "gene_name": "proza", "organism": "Zebrafish", "refseq_name": "protein Z, vitamin K-dependent plasma glycoprotein a precursor", "refseq_ac": "NP_001314721", "gene_names_uniprotkb": "proza; wu:fj51g06; zgc:152997", "gene_names_refseq": "proza; wu:fj51g06; zgc:152997", "protein_names_uniprotkb": "Protein Z, vitamin K-dependent plasma glycoprotein a precursor", "protein_names_refseq": "protein Z, vitamin K-dependent plasma glycoprotein a precursor", "tax_id": 7955, "disease": "stroke (Disease Ontology:DOID:0051061); Behcet's disease (Disease Ontology:DOID:13241); brain ischemia (Disease Ontology:DOID:2316)", "pathway": " (dre:768176); (R-DRE-159763); (R-DRE-159782); (R-DRE-9769739)", "pathway_count": 4, "publication_count": 4, "publication_id_list": "22659140;27189481;28252024;28871129", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.16540040.1, SRR32588734.3465366.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jul 8, 2025 this sequence version replaced NP_001314721.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8A5", "ec_number_list": "", "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis;GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1Q5S2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5Y4-1", "uniprot_id": "F1Q5Y4_DANRE", "mass": 36890.0, "length": 325, "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5", "gene_name": "st6galnac5a", "organism": "Zebrafish", "refseq_name": "alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5", "refseq_ac": "XP_692047", "gene_names_uniprotkb": "st6galnac5a", "gene_names_refseq": "st6galnac5a", "protein_names_uniprotkb": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; GD1 alpha synthase; GalNAc alpha-2,6-sialyltransferase V; ST6GalNAc V; Sialyltransferase 7E", "protein_names_refseq": "alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5", "tax_id": 7955, "disease": "", "pathway": " (dre:563594); (R-DRE-4085001); (R-DRE-9840309)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_692047.4. COMPLETENESS: full length., [RefSeq]; Predominantly catalyzes the biosynthesis of ganglioside GD1alpha from GM1b in the brain, by transferring the sialyl group (N-acetyl-alpha-neuraminyl or NeuAc) from CMP-NeuAc to the GalNAc residue on the NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc sequence of GM1b. GD1alpha is a critical molecule in the communication and interaction between neuronal cells and their supportive cells, particularly in brain tissues, and functions as an adhesion molecule in the process of metastasis. Also shows activity towards sialyl Lc4Cer (N-acetyl-alpha-neuraminosyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1')-N-acyl-sphing-4-enine) generating disialyl Lc4Cer, which can lead to the synthesis of disialyl Lewis a (Le(a)), suggested to be a cancer-associated antigen., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7B6", "ec_number_list": "", "go_molecular_function": "GO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0009311 oligosaccharide metabolic process;GO:0001574 ganglioside biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q5Y4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q5Z7-1", "uniprot_id": "F1Q5Z7_DANRE", "mass": 91216.0, "length": 785, "protein_name": "Cilia- and flagella-associated protein 91", "gene_name": "cfap91", "organism": "Zebrafish", "refseq_name": "cilia- and flagella-associated protein 91 isoform X1", "refseq_ac": "XP_001333344", "gene_names_uniprotkb": "cfap91", "gene_names_refseq": "cfap91", "protein_names_uniprotkb": "Cilia- and flagella-associated protein 91", "protein_names_refseq": "cilia- and flagella-associated protein 91 isoform X1", "tax_id": 7955, "disease": "spermatogenic failure 51 (Disease Ontology:DOID:0112273)", "pathway": " (dre:793563)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001333344.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PU84", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005930 axoneme", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q5Z7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q614-1", "uniprot_id": "F1Q614_DANRE", "mass": 49320.0, "length": 435, "protein_name": "Tyrosine-protein kinase STYK1", "gene_name": "styk1a", "organism": "Zebrafish", "refseq_name": "tyrosine-protein kinase STYK1", "refseq_ac": "XP_005159545", "gene_names_uniprotkb": "styk1a", "gene_names_refseq": "styk1a", "protein_names_uniprotkb": "Tyrosine-protein kinase STYK1", "protein_names_refseq": "tyrosine-protein kinase STYK1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886109)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B634", "ec_number_list": "", "go_molecular_function": "GO:0004715 non-membrane spanning protein tyrosine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0012505 endomembrane system", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q614-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q618-1", "uniprot_id": "F1Q618_DANRE", "mass": 347712.0, "length": 3139, "protein_name": "Msx2-interacting protein", "gene_name": "si:ch1073-335m2.2", "organism": "Zebrafish", "refseq_name": "msx2-interacting protein isoform X1", "refseq_ac": "XP_005170404", "gene_names_uniprotkb": "si:ch1073-335m2.2", "gene_names_refseq": "si:ch1073-335m2.2", "protein_names_uniprotkb": "Msx2-interacting protein; SMART/HDAC1-associated repressor protein; SPEN homolog", "protein_names_refseq": "msx2-interacting protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:322667)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BI38", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0003714 transcription corepressor activity;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007219 Notch signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q618-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q639-1", "uniprot_id": "F1Q639_DANRE", "mass": 84726.0, "length": 777, "protein_name": "RING finger protein unkempt homolog", "gene_name": "unk", "organism": "Zebrafish", "refseq_name": "RING finger protein unkempt homolog", "refseq_ac": "NP_956530", "gene_names_uniprotkb": "unk; zc3h5; zc3hdc5; zgc:55407", "gene_names_refseq": "unk; zc3h5; zc3hdc5; zgc:55407", "protein_names_uniprotkb": "RING finger protein unkempt homolog", "protein_names_refseq": "RING finger protein unkempt homolog; unkempt family zinc finger; unkempt homolog; zinc finger CCCH type domain containing 5; zinc finger CCCH-type containing 5", "tax_id": 7955, "disease": "", "pathway": " (dre:393205)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "24240475;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC047170.1, GDQH01007296.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476735, SAMEA4476736 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On or before Jun 20, 2015 this sequence version replaced XP_009305112.1, NP_956530.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PE84;F1QL48", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:1990715 mRNA CDS binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0048667 cell morphogenesis involved in neuron differentiation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1Q639-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q653-1", "uniprot_id": "F1Q653_DANRE", "mass": 220185.0, "length": 2003, "protein_name": "Tyrosine-protein phosphatase non-receptor type 23", "gene_name": "ptpn23a", "organism": "Zebrafish", "refseq_name": "tyrosine-protein phosphatase non-receptor type 23 isoform X1", "refseq_ac": "XP_005158252", "gene_names_uniprotkb": "ptpn23a; ptp23a; si:dkey-201i6.7", "gene_names_refseq": "ptp23a; ptpn23a; si:dkey-201i6.7", "protein_names_uniprotkb": "Tyrosine-protein phosphatase non-receptor type 23; 3.1.3.48", "protein_names_refseq": "tyrosine-protein phosphatase non-receptor type 23 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100007322)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "20838449;23974070;26469318;28252024;28814789", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays a role in sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs) via its interaction with the ESCRT-I complex (endosomal sorting complex required for transport I), and possibly also other ESCRT complexes. May act as a negative regulator of Ras-mediated mitogenic activity. Plays a role in ciliogenesis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B4I3", "ec_number_list": "", "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome", "go_biological_process": "GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway;GO:0045022 early endosome to late endosome transport;GO:0030030 cell projection organization;GO:0032456 endocytic recycling;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1Q653-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q677-1", "uniprot_id": "F1Q677_DANRE", "mass": 30579.0, "length": 259, "protein_name": "Enkurin", "gene_name": "enkur", "organism": "Zebrafish", "refseq_name": "enkurin", "refseq_ac": "NP_001292542", "gene_names_uniprotkb": "enkur; c10orf63", "gene_names_refseq": "c10orf63; enkur", "protein_names_uniprotkb": "Enkurin", "protein_names_refseq": "enkurin", "tax_id": 7955, "disease": "", "pathway": " (dre:402794)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15385169;24094744;26469318;34610312", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P6E4", "ec_number_list": "", "go_molecular_function": "GO:0005516 calmodulin binding", "go_cellular_component": "GO:0001669 acrosomal vesicle;GO:0005879 axonemal microtubule", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1Q677-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q679-1", "uniprot_id": "F1Q679_DANRE", "mass": 87953.0, "length": 764, "protein_name": "Hexosyltransferase", "gene_name": "chpf2", "organism": "Zebrafish", "refseq_name": "chondroitin sulfate glucuronyltransferase", "refseq_ac": "XP_001337205", "gene_names_uniprotkb": "chpf2", "gene_names_refseq": "chpf2", "protein_names_uniprotkb": "Hexosyltransferase; 2.4.1.-", "protein_names_refseq": "chondroitin sulfate glucuronyltransferase", "tax_id": 7955, "disease": "", "pathway": " (dre:100000654); (R-DRE-2022870)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PUJ0", "ec_number_list": "2.4.1.-", "go_molecular_function": "GO:0050510 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity;GO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0050650 chondroitin sulfate proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q679-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q688-1", "uniprot_id": "F1Q688_DANRE", "mass": 50655.0, "length": 466, "protein_name": "Caveolae-associated protein 2a", "gene_name": "cavin2a", "organism": "Zebrafish", "refseq_name": "caveolae-associated protein 2a", "refseq_ac": "NP_001263999", "gene_names_uniprotkb": "cavin2a; sdpra; sdpr; si:dkey-191g15.1", "gene_names_refseq": "cavin2a; sdpra; sdpr; si:dkey-191g15.1", "protein_names_uniprotkb": "Caveolae-associated protein 2a", "protein_names_refseq": "caveolae-associated protein 2a; serum deprivation response a", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 8, "publication_id_list": "26323694;28256502;28912276;30021837;33068532;34633413;36047082;37024546", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056329.1, GDQH01008472.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505383 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Jun 25, 2025 this sequence version replaced NP_001263999.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P540", "ec_number_list": "", "go_molecular_function": "GO:0005080 protein kinase C binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005901 caveola", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1Q688-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6B4-1", "uniprot_id": "F1Q6B4_DANRE", "mass": 32338.0, "length": 284, "protein_name": "Thioredoxin-related transmembrane protein 1", "gene_name": "tmx1", "organism": "Zebrafish", "refseq_name": "thioredoxin-related transmembrane protein 1 precursor", "refseq_ac": "NP_001108605", "gene_names_uniprotkb": "tmx1; txndc1; txndc; wu:fc04g05", "gene_names_refseq": "tmx1; txndc1; txndc; wu:fc04g05", "protein_names_uniprotkb": "Thioredoxin-related transmembrane protein 1; Protein disulfide-isomerase TMX1; Thioredoxin domain-containing protein 1", "protein_names_refseq": "thioredoxin domain containing 1; thioredoxin-related transmembrane protein 1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:323607)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "16109975;16466575;21082716;26469318;29021367;30359749;33159854", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056715.1, EH546258.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DR722002.1 and BC056715.1. On Mar 7, 2008 this sequence version replaced XP_001336550.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI57", "ec_number_list": "", "go_molecular_function": "GO:0015036 disulfide oxidoreductase activity;GO:0003756 protein disulfide isomerase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0031966 mitochondrial membrane;GO:0005789 endoplasmic reticulum membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0090331 negative regulation of platelet aggregation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1Q6B4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6C4-1", "uniprot_id": "F1Q6C4_DANRE", "mass": 119223.0, "length": 1070, "protein_name": "Tubulin monoglutamylase TTLL4 isoform 1", "gene_name": "ttll4", "organism": "Zebrafish", "refseq_name": "tubulin monoglutamylase TTLL4 isoform 1", "refseq_ac": "NP_001417762", "gene_names_uniprotkb": "ttll4; si:ch211-67e16.9", "gene_names_refseq": "si:ch211-67e16.9; ttll4", "protein_names_uniprotkb": "Tubulin monoglutamylase TTLL4 isoform 1", "protein_names_refseq": "tubulin monoglutamylase TTLL4 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:558702)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "21262966;26469318;27189481;36414642", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01008826.1, GDQH01003108.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Jun 16, 2025 this sequence version replaced NP_001417762.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RM67", "ec_number_list": "", "go_molecular_function": "GO:0070740 tubulin-glutamic acid ligase activity;GO:0005524 ATP binding;GO:0015631 tubulin binding;GO:0016874 ligase activity", "go_cellular_component": "GO:0005874 microtubule;GO:0036064 ciliary basal body", "go_biological_process": "GO:0000226 microtubule cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1Q6C4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6D3-1", "uniprot_id": "F1Q6D3_DANRE", "mass": 68893.0, "length": 604, "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene_name": "galnt9", "organism": "Zebrafish", "refseq_name": "polypeptide N-acetylgalactosaminyltransferase 9", "refseq_ac": "XP_001338018", "gene_names_uniprotkb": "galnt9", "gene_names_refseq": "galnt9", "protein_names_uniprotkb": "Polypeptide N-acetylgalactosaminyltransferase; 2.4.1.-; Protein-UDP acetylgalactosaminyltransferase", "protein_names_refseq": "polypeptide N-acetylgalactosaminyltransferase 9", "tax_id": 7955, "disease": "", "pathway": " (dre:797549); (R-DRE-913709)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Does not glycosylate apomucin or SDC3., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q7A7", "ec_number_list": "2.4.1.-", "go_molecular_function": "GO:0046872 metal ion binding;GO:0030246 carbohydrate binding;GO:0004653 polypeptide N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0006493 protein O-linked glycosylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q6D3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6E4-1", "uniprot_id": "F1Q6E4_DANRE", "mass": 22584.0, "length": 218, "protein_name": "Jupiter microtubule associated homolog 2", "gene_name": "jpt2", "organism": "Zebrafish", "refseq_name": "jupiter microtubule associated homolog 2", "refseq_ac": "NP_955869", "gene_names_uniprotkb": "jpt2; fc04g11; hn1l; wu:fb37f03; wu:fc04g11; zgc:55712", "gene_names_refseq": "fc04g11; hn1l; jpt2; wu:fb37f03; wu:fc04g11; zgc:55712", "protein_names_uniprotkb": "Jupiter microtubule associated homolog 2", "protein_names_refseq": "hematological and neurological expressed 1-like; jupiter microtubule associated homolog 2", "tax_id": 7955, "disease": "", "pathway": " (dre:321880)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "15520368;16109975;24198278;24240475;26469318;27156127;27189481;27235108", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154304.1, AY394952.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 25, 2025 this sequence version replaced NP_955869.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PD26", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1Q6E4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6F9-1", "uniprot_id": "F1Q6F9_DANRE", "mass": 110872.0, "length": 983, "protein_name": "SAFB-like transcription modulator", "gene_name": "sltm", "organism": "Zebrafish", "refseq_name": "SAFB-like transcription modulator", "refseq_ac": "NP_998498", "gene_names_uniprotkb": "sltm; wu:fd12b08; zgc:65985", "gene_names_refseq": "sltm; wu:fd12b08; zgc:65985", "protein_names_uniprotkb": "SAFB-like transcription modulator", "protein_names_refseq": "SAFB-like transcription modulator", "tax_id": 7955, "disease": "", "pathway": " (dre:406642)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "19478994;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395014.1412701.1, SRR26395012.1570149.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Jun 25, 2025 this sequence version replaced NP_998498.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PF00", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1Q6F9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6H8-1", "uniprot_id": "F1Q6H8_DANRE", "mass": 29692.0, "length": 257, "protein_name": "Axonemal dynein light intermediate polypeptide 1", "gene_name": "dnali1", "organism": "Zebrafish", "refseq_name": "axonemal dynein light intermediate polypeptide 1", "refseq_ac": "NP_001103584", "gene_names_uniprotkb": "dnali1; zgc:171493; zgc:171595", "gene_names_refseq": "dnali1; zgc:171493; zgc:171595", "protein_names_uniprotkb": "Axonemal dynein light intermediate polypeptide 1; Inner dynein arm light chain, axonemal", "protein_names_refseq": "axonemal dynein light intermediate polypeptide 1", "tax_id": 7955, "disease": "spermatogenic failure 83 (Disease Ontology:DOID:0070582)", "pathway": " (dre:567632)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27903883;28648842;33251213", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC153985.1, EH506219.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On or before Feb 4, 2011 this sequence version replaced NP_001108171.1, NP_001103584.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Involved in sperm flagellum assembly., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NF38", "ec_number_list": "", "go_molecular_function": "GO:0045504 dynein heavy chain binding", "go_cellular_component": "GO:0005930 axoneme;GO:0097546 ciliary base;GO:0030286 dynein complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1Q6H8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6I6-1", "uniprot_id": "F1Q6I6_DANRE", "mass": 15830.0, "length": 143, "protein_name": "Hemoglobin, alpha embryonic 5", "gene_name": "hbae5", "organism": "Zebrafish", "refseq_name": "hemoglobin, alpha embryonic 5", "refseq_ac": "NP_001313630", "gene_names_uniprotkb": "hbae5; hbx; hbz", "gene_names_refseq": "hbae5; hbx; hbz", "protein_names_uniprotkb": "Hemoglobin, alpha embryonic 5", "protein_names_refseq": "alpha x-globin; hemoglobin zeta; hemoglobin, alpha embryonic 5", "tax_id": 7955, "disease": "", "pathway": " (dre:561790)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "22281776;22537494;23586901;25975375;33763998;35531980;35758696;38953462;39409826;9671819", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH476369.1, EH450566.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Jun 25, 2025 this sequence version replaced NP_001313630.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8W3", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0019825 oxygen binding;GO:0005344 oxygen carrier activity", "go_cellular_component": "GO:0005833 hemoglobin complex;GO:0031838 haptoglobin-hemoglobin complex", "go_biological_process": "GO:0048821 erythrocyte development;GO:0015671 oxygen transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1Q6I6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6J0-1", "uniprot_id": "F1Q6J0_DANRE", "mass": 45305.0, "length": 396, "protein_name": "Histamine H3 receptor", "gene_name": "LOC100331077", "organism": "Zebrafish", "refseq_name": "histamine H3 receptor", "refseq_ac": "XP_002667517", "gene_names_uniprotkb": "LOC100331077", "gene_names_refseq": "LOC100331077", "protein_names_uniprotkb": "Histamine H3 receptor", "protein_names_refseq": "histamine H3 receptor", "tax_id": 7955, "disease": "", "pathway": " (dre:100331077)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_002667517.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RS69", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004969 histamine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0043410 positive regulation of MAPK cascade;GO:0071880 adenylate cyclase-activating adrenergic receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q6J0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6K0-1", "uniprot_id": "F1Q6K0_DANRE", "mass": 35045.0, "length": 312, "protein_name": "Phospholipid phosphatase 3", "gene_name": "plpp3", "organism": "Zebrafish", "refseq_name": "phospholipid phosphatase 3 isoform X1", "refseq_ac": "XP_001919561", "gene_names_uniprotkb": "plpp3", "gene_names_refseq": "plpp3", "protein_names_uniprotkb": "Phospholipid phosphatase 3; 3.1.3.4; Lipid phosphate phosphohydrolase 3; PAP2-beta; Phosphatidate phosphohydrolase type 2b; Phosphatidic acid phosphatase 2b", "protein_names_refseq": "phospholipid phosphatase 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:557680); (R-DRE-9845614)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Independently of this phosphatase activity may also function in the Wnt signaling pathway and the stabilization of beta-catenin/CTNNB1, thereby regulating cell proliferation, migration and differentiation in angiogenesis or yet in tumor growth. Also plays a role in integrin-mediated cell-cell adhesion in angiogenesis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QL25", "ec_number_list": "3.1.3.4;3.1.3.106;3.6.1.75;3.6.1.-;3.1.3.-;3.6.1.68", "go_molecular_function": "GO:0008195 phosphatidate phosphatase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane;GO:0045121 membrane raft;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0098609 cell-cell adhesion;GO:0006644 phospholipid metabolic process;GO:0046839 phospholipid dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q6K0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6N3-1", "uniprot_id": "F1Q6N3_DANRE", "mass": 60500.0, "length": 518, "protein_name": "Potassium voltage-gated channel subfamily V member 2", "gene_name": "kcnv2a", "organism": "Zebrafish", "refseq_name": "potassium voltage-gated channel subfamily V member 2", "refseq_ac": "NP_001373570", "gene_names_uniprotkb": "kcnv2a; si:ch211-241o7.4", "gene_names_refseq": "kcnv2a; si:ch211-241o7.4", "protein_names_uniprotkb": "Potassium voltage-gated channel subfamily V member 2; Voltage-gated potassium channel subunit Kv8.2", "protein_names_refseq": "potassium voltage-gated channel subfamily V member 2", "tax_id": 7955, "disease": "cone dystrophy with supernormal rod responses (Disease Ontology:DOID:0081022)", "pathway": " (dre:567267)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "25217480;26469318;29422031;32293666;35110541", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC142902.1, SRR32588722.21883049.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Mar 2, 2023 this sequence version replaced XP_695650.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Potassium channel subunit. Modulates channel activity by shifting the threshold and the half-maximal activation to more negative values., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T6K3", "ec_number_list": "", "go_molecular_function": "GO:0015459 potassium channel regulator activity;GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0016020 membrane;GO:0008076 voltage-gated potassium channel complex", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0001508 action potential;GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1Q6N3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6P4-1", "uniprot_id": "F1Q6P4_DANRE", "mass": 28644.0, "length": 256, "protein_name": "Tetraspanin", "gene_name": "cd82a", "organism": "Zebrafish", "refseq_name": "CD82 molecule a isoform 1", "refseq_ac": "NP_997826", "gene_names_uniprotkb": "cd82a; fc18f11; id:ibd2867; wu:fc18f11; wu:fk50g10; wu:fp72a01; xx:fp72a01; zgc:73292; zgc:77871", "gene_names_refseq": "cd82a; fc18f11; id:ibd2867; wu:fc18f11; wu:fk50g10; wu:fp72a01; xx:fp72a01; zgc:73292; zgc:77871", "protein_names_uniprotkb": "Tetraspanin", "protein_names_refseq": "CD82 antigen, a; CD82 molecule a isoform 1", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); hypertension (Disease Ontology:DOID:10763); urinary bladder cancer (Disease Ontology:DOID:11054); ovarian cancer (Disease Ontology:DOID:2394); transitional cell carcinoma (Disease Ontology:DOID:2671); endometrial carcinoma (Disease Ontology:DOID:2871); breast carcinoma (Disease Ontology:DOID:3459); cervical squamous cell carcinoma (Disease Ontology:DOID:3744)", "pathway": " (dre:324098)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11731487;23457027;25630924;26469318;28252024;29576475;31908317;35111746", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC063988.1, GDQQ01006263.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Jun 23, 2025 this sequence version replaced NP_997826.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9Q171", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1Q6P4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6Q0-1", "uniprot_id": "F1Q6Q0_DANRE", "mass": 30743.0, "length": 280, "protein_name": "Claudin 23a precursor", "gene_name": "cldn23.1", "organism": "Zebrafish", "refseq_name": "claudin 23a", "refseq_ac": "NP_001373643", "gene_names_uniprotkb": "cldn23.1; cldn23a2; cldn23a; si:ch211-95j8.2", "gene_names_refseq": "cldn23.1; cldn23a2; cldn23a; si:ch211-95j8.2", "protein_names_uniprotkb": "Claudin 23a precursor", "protein_names_refseq": "claudin 23a; claudin 23", "tax_id": 7955, "disease": "atopic dermatitis (Disease Ontology:DOID:3310)", "pathway": " (dre:553515)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "23726886;26469318;31307377;31683705", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC081659.1, SRR26395013.150284.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Aug 31, 2020 this sequence version replaced XP_001337447.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q785", "ec_number_list": "", "go_molecular_function": "GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005923 bicellular tight junction", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1Q6Q0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6U7-1", "uniprot_id": "F1Q6U7_DANRE", "mass": 66710.0, "length": 630, "protein_name": "Uncharacterized protein wasa", "gene_name": "wasa", "organism": "Zebrafish", "refseq_name": "uncharacterized protein wasa", "refseq_ac": "XP_699919", "gene_names_uniprotkb": "wasa", "gene_names_refseq": "wasa", "protein_names_uniprotkb": "Uncharacterized protein wasa", "protein_names_refseq": "uncharacterized protein wasa", "tax_id": 7955, "disease": "X-linked severe congenital neutropenia (Disease Ontology:DOID:0112128); thrombocytopenia (Disease Ontology:DOID:1588); IgA glomerulonephritis (Disease Ontology:DOID:2986); Wiskott-Aldrich syndrome (Disease Ontology:DOID:9169)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_699919.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TFI4;A0AC58G9W7;A0AC58G9W8", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding;GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005856 cytoskeleton", "go_biological_process": "GO:0007015 actin filament organization;GO:0030833 regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q6U7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6X3-1", "uniprot_id": "F1Q6X3_DANRE", "mass": 38163.0, "length": 338, "protein_name": "Adenosine receptor A1", "gene_name": "LOC108179103", "organism": "Zebrafish", "refseq_name": "adenosine receptor A1", "refseq_ac": "XP_017212270", "gene_names_uniprotkb": "LOC108179103", "gene_names_refseq": "LOC108179103", "protein_names_uniprotkb": "Adenosine receptor A1", "protein_names_refseq": "adenosine receptor A1", "tax_id": 7955, "disease": "", "pathway": " (dre:108179103); (R-DRE-417973); (R-DRE-418594)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YZ23", "ec_number_list": "", "go_molecular_function": "GO:0001609 G protein-coupled adenosine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030425 dendrite;GO:0045202 synapse", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q6X3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6Y0-1", "uniprot_id": "F1Q6Y0_DANRE", "mass": 8498.0, "length": 74, "protein_name": "TP53-regulated inhibitor of apoptosis 1", "gene_name": "triap1", "organism": "Zebrafish", "refseq_name": "TP53-regulated inhibitor of apoptosis 1", "refseq_ac": "NP_001153292", "gene_names_uniprotkb": "triap1; zgc:112025", "gene_names_refseq": "triap1; zgc:112025", "protein_names_uniprotkb": "TP53-regulated inhibitor of apoptosis 1", "protein_names_refseq": "TP53-regulated inhibitor of apoptosis 1; p53-inducible cell-survival factor", "tax_id": 7955, "disease": "", "pathway": " (dre:550367); (R-DRE-6803204)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH573848.1, DT881270.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1, EH536760.1 and EH573848.1. On Jul 30, 2011 this sequence version replaced NP_001153292.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUI4", "ec_number_list": "1.6.5.5", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005758 mitochondrial intermembrane space", "go_biological_process": "GO:0015914 phospholipid transport;GO:0120009 intermembrane lipid transfer;GO:0097035 regulation of membrane lipid distribution", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1Q6Y0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q6Z9-1", "uniprot_id": "F1Q6Z9_DANRE", "mass": 106892.0, "length": 941, "protein_name": "Neutral alpha-glucosidase AB", "gene_name": "ganabb", "organism": "Zebrafish", "refseq_name": "neutral alpha-glucosidase AB", "refseq_ac": "XP_009289535", "gene_names_uniprotkb": "ganabb", "gene_names_refseq": "ganabb", "protein_names_uniprotkb": "Neutral alpha-glucosidase AB; 3.2.1.207; Alpha-glucosidase 2; Glucosidase II subunit alpha", "protein_names_refseq": "neutral alpha-glucosidase AB", "tax_id": 7955, "disease": "polycystic liver disease (Disease Ontology:DOID:0050770); polycystic kidney disease (Disease Ontology:DOID:0080322); polycystic kidney disease 3 (Disease Ontology:DOID:0110860)", "pathway": " (dre:100334730)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AI40", "ec_number_list": "3.2.1.207", "go_molecular_function": "GO:0030246 carbohydrate binding;GO:0033919 glucan 1,3-alpha-glucosidase activity;GO:0106407 Glc2Man9GlcNAc2 oligosaccharide glucosidase activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0017177 glucosidase II complex", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0006491 N-glycan processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q6Z9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q712-1", "uniprot_id": "F1Q712_DANRE", "mass": 234519.0, "length": 2118, "protein_name": "Germinal-center associated nuclear protein", "gene_name": "mcm3ap", "organism": "Zebrafish", "refseq_name": "germinal-center associated nuclear protein", "refseq_ac": "XP_005167925", "gene_names_uniprotkb": "mcm3ap", "gene_names_refseq": "mcm3ap", "protein_names_uniprotkb": "Germinal-center associated nuclear protein; 2.3.1.48", "protein_names_refseq": "germinal-center associated nuclear protein", "tax_id": 7955, "disease": "", "pathway": " (dre:436589)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; As a component of the TREX-2 complex, involved in the export of mRNAs to the cytoplasm through the nuclear pores. Through the acetylation of histones, affects the assembly of nucleosomes at immunoglobulin variable region genes and promotes the recruitment and positioning of transcription complex to favor DNA cytosine deaminase AICDA/AID targeting, hence promoting somatic hypermutations., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BFC0", "ec_number_list": "2.3.1.48;2.3.1.-;2.3.1.57", "go_molecular_function": "GO:0061733 protein-lysine-acetyltransferase activity;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005643 nuclear pore;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005694 chromosome", "go_biological_process": "GO:0006406 mRNA export from nucleus;GO:0015031 protein transport;GO:0002376 immune system process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q712-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q713-1", "uniprot_id": "F1Q713_DANRE", "mass": 38116.0, "length": 354, "protein_name": "Sorbitol dehydrogenase", "gene_name": "sord", "organism": "Zebrafish", "refseq_name": "sorbitol dehydrogenase", "refseq_ac": "NP_001165890", "gene_names_uniprotkb": "sord; zgc:63674", "gene_names_refseq": "sord; zgc:63674", "protein_names_uniprotkb": "Sorbitol dehydrogenase; Polyol dehydrogenase", "protein_names_refseq": "sorbitol dehydrogenase", "tax_id": 7955, "disease": "autosomal recessive distal hereditary motor neuronopathy 8 (Disease Ontology:DOID:0081427); cataract (Disease Ontology:DOID:83)", "pathway": " (dre:570613); (R-DRE-5652227); (R-DRE-5661270)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "26469318;31515263", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTC2", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003939 L-iditol 2-dehydrogenase (NAD+) activity", "go_cellular_component": "GO:0005829 cytosol;GO:0031514 motile cilium", "go_biological_process": "GO:0046370 fructose biosynthetic process;GO:0006062 sorbitol catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1Q713-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q729-1", "uniprot_id": "F1Q729_DANRE", "mass": 29662.0, "length": 258, "protein_name": "1.1.1.41; Mitochondrial calcium uniporter regulator 1", "gene_name": "mcur1", "organism": "Zebrafish", "refseq_name": "mitochondrial calcium uniporter regulator 1", "refseq_ac": "NP_001338730", "gene_names_uniprotkb": "mcur1; im:7054683; wu:fb37a05; zgc:112190; zgc:165532", "gene_names_refseq": "im:7054683; mcur1; wu:fb37a05; zgc:112190; zgc:165532", "protein_names_uniprotkb": "1.1.1.41; Mitochondrial calcium uniporter regulator 1", "protein_names_refseq": "mitochondrial calcium uniporter regulator 1", "tax_id": 7955, "disease": "", "pathway": " (dre:550408)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16109975;26469318;27859782;36283702", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003617.1, GFIL01013103.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1, EH502903.1, EH552741.1 and EH573865.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAJ3", "ec_number_list": "", "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0004449 isocitrate dehydrogenase (NAD+) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0036444 calcium import into the mitochondrion;GO:0051561 positive regulation of mitochondrial calcium ion concentration", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1Q729-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q753-1", "uniprot_id": "F1Q753_DANRE", "mass": 96552.0, "length": 861, "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1", "gene_name": "ppp6r2b", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1", "refseq_ac": "XP_003200469", "gene_names_uniprotkb": "ppp6r2b", "gene_names_refseq": "ppp6r2b", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1", "protein_names_refseq": "serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003200469.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RJ83;A0AC58HWI8;A0AC58HWJ0;A0AC58HWN3", "ec_number_list": "", "go_molecular_function": "GO:0019888 protein phosphatase regulator activity;GO:0019903 protein phosphatase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0009966 regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q753-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q793-1", "uniprot_id": "F1Q793_DANRE", "mass": 53990.0, "length": 483, "protein_name": "Rab GTPase-binding effector protein 2", "gene_name": "rabep2", "organism": "Zebrafish", "refseq_name": "rab GTPase-binding effector protein 2", "refseq_ac": "NP_001074094", "gene_names_uniprotkb": "rabep2; zgc:158419", "gene_names_refseq": "rabep2; zgc:158419", "protein_names_uniprotkb": "Rab GTPase-binding effector protein 2", "protein_names_refseq": "rab GTPase-binding effector protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:791143)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01032101.1, BC129228.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1 and CF265814.1. On Feb 23, 2016 this sequence version replaced NP_001074094.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Plays a role in membrane trafficking and in homotypic early endosome fusion. Participates in arteriogenesis by regulating vascular endothelial growth factor receptor 2/VEGFR2 cell surface expression and endosomal trafficking. By interacting with SDCCAG8, localizes to centrosomes and plays a critical role in ciliogenesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCV5", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0008083 growth factor activity", "go_cellular_component": "GO:0005769 early endosome;GO:0005813 centrosome", "go_biological_process": "GO:0006897 endocytosis;GO:0015031 protein transport;GO:0030030 cell projection organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1Q793-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7C9-1", "uniprot_id": "F1Q7C9_DANRE", "mass": 38890.0, "length": 345, "protein_name": "Olfactory receptor 6C75 isoform X1", "gene_name": "or6at1", "organism": "Zebrafish", "refseq_name": "olfactory receptor 6C75 isoform X1", "refseq_ac": "XP_009293935", "gene_names_uniprotkb": "or6at1", "gene_names_refseq": "or6at1", "protein_names_uniprotkb": "Olfactory receptor 6C75 isoform X1", "protein_names_refseq": "olfactory receptor 6C75 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:30356)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ALT7", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q7C9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7D2-1", "uniprot_id": "F1Q7D2_DANRE", "mass": 140909.0, "length": 1263, "protein_name": "Ubiquitin carboxyl-terminal hydrolase 40", "gene_name": "usp40", "organism": "Zebrafish", "refseq_name": "ubiquitin carboxyl-terminal hydrolase 40", "refseq_ac": "XP_001921353", "gene_names_uniprotkb": "usp40", "gene_names_refseq": "usp40", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase 40", "protein_names_refseq": "ubiquitin carboxyl-terminal hydrolase 40", "tax_id": 7955, "disease": "", "pathway": " (dre:402834)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001921353.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QLE0", "ec_number_list": "", "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0016579 protein deubiquitination;GO:0031647 regulation of protein stability;GO:0039021 pronephric glomerulus development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q7D2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7F9-1", "uniprot_id": "F1Q7F9_DANRE", "mass": 26083.0, "length": 235, "protein_name": "Synaptophysin-like protein 2a", "gene_name": "sypl2a", "organism": "Zebrafish", "refseq_name": "synaptophysin-like protein 2a", "refseq_ac": "NP_956961", "gene_names_uniprotkb": "sypl2a; sypl; wu:fd54d09; zgc:65838", "gene_names_refseq": "sypl2a; sypl; wu:fd54d09; zgc:65838", "protein_names_uniprotkb": "Synaptophysin-like protein 2a", "protein_names_refseq": "synaptophysin-like protein 2a; synaptophysin-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:393640)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15492244;19439512", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01000710.1, BC058043.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Jun 23, 2025 this sequence version replaced NP_956961.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFK8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0030672 synaptic vesicle membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1Q7F9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7G9-1", "uniprot_id": "F1Q7G9_DANRE", "mass": 54524.0, "length": 488, "protein_name": "Thymus-specific serine protease precursor", "gene_name": "prss59", "organism": "Zebrafish", "refseq_name": "thymus-specific serine protease precursor", "refseq_ac": "NP_001074031", "gene_names_uniprotkb": "prss59; prss16; wu:fi04d10; wu:fi36c10; zgc:158605", "gene_names_refseq": "prss16; prss59; wu:fi04d10; wu:fi36c10; zgc:158605", "protein_names_uniprotkb": "Thymus-specific serine protease precursor", "protein_names_refseq": "protease, serine, 16 (thymus); serine protease 16; thymus-specific serine protease precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:556307)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01045685.1, BC129320.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1, EH506502.1, EH573376.1 and EH572260.1. On May 13, 2016 this sequence version replaced NP_001074031.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCQ0", "ec_number_list": "", "go_molecular_function": "GO:0008239 dipeptidyl-peptidase activity;GO:0070008 serine-type exopeptidase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1Q7G9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7H1-1", "uniprot_id": "F1Q7H1_DANRE", "mass": 59886.0, "length": 524, "protein_name": "Sterol 26-hydroxylase, mitochondrial isoform X1", "gene_name": "cyp27a1.1", "organism": "Zebrafish", "refseq_name": "sterol 26-hydroxylase, mitochondrial isoform X1", "refseq_ac": "XP_002663445", "gene_names_uniprotkb": "cyp27a1.1", "gene_names_refseq": "cyp27a1.1", "protein_names_uniprotkb": "Sterol 26-hydroxylase, mitochondrial isoform X1", "protein_names_refseq": "sterol 26-hydroxylase, mitochondrial isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:402831); (R-DRE-193368); (R-DRE-193775); (R-DRE-193807); (R-DRE-211976)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RDS2", "ec_number_list": "", "go_molecular_function": "GO:0031073 cholesterol 26-hydroxylase activity;GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0030343 vitamin D3 25-hydroxylase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0036378 calcitriol biosynthetic process from calciol", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q7H1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7K3-1", "uniprot_id": "F1Q7K3_DANRE", "mass": 372623.0, "length": 3356, "protein_name": "Zinc finger homeobox protein 3", "gene_name": "zfhx3a", "organism": "Zebrafish", "refseq_name": "zinc finger homeobox protein 3", "refseq_ac": "XP_692222", "gene_names_uniprotkb": "zfhx3a", "gene_names_refseq": "zfhx3a", "protein_names_uniprotkb": "Zinc finger homeobox protein 3; AT motif-binding factor 1; AT-binding transcription factor 1; Alpha-fetoprotein enhancer-binding protein; Zinc finger homeodomain protein 3", "protein_names_refseq": "zinc finger homeobox protein 3", "tax_id": 7955, "disease": "familial atrial fibrillation (Disease Ontology:DOID:0050650); spinocerebellar ataxia 4 (Disease Ontology:DOID:0050957); prostate cancer (Disease Ontology:DOID:10283); breast cancer (Disease Ontology:DOID:1612); autoimmune hepatitis (Disease Ontology:DOID:2048); mucinous adenocarcinoma (Disease Ontology:DOID:3030); breast carcinoma (Disease Ontology:DOID:3459); lung non-small cell carcinoma (Disease Ontology:DOID:3908); lung adenocarcinoma (Disease Ontology:DOID:3910); cervical cancer (Disease Ontology:DOID:4362); tubular adenocarcinoma (Disease Ontology:DOID:4929); hepatocellular carcinoma (Disease Ontology:DOID:684); hepatoblastoma (Disease Ontology:DOID:687); colorectal cancer (Disease Ontology:DOID:9256); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:563768)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_692222.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 15, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7C1;F1QZY8", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007517 muscle organ development;GO:0045664 regulation of neuron differentiation;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q7K3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7T3-1", "uniprot_id": "F1Q7T3_DANRE", "mass": 54568.0, "length": 508, "protein_name": "Monocarboxylate transporter 4 isoform X1", "gene_name": "slc16a3b", "organism": "Zebrafish", "refseq_name": "monocarboxylate transporter 4 isoform X1", "refseq_ac": "XP_005169526", "gene_names_uniprotkb": "slc16a3b; MCT4b; slc16a3; wu:fd20b02; wu:fi38f12; zgc:55905", "gene_names_refseq": "MCT4b; slc16a3b; slc16a3; wu:fd20b02; wu:fi38f12; zgc:55905", "protein_names_uniprotkb": "Monocarboxylate transporter 4 isoform X1", "protein_names_refseq": "monocarboxylate transporter 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGR7;A0AC58GUW3;A0AC58GUY4", "ec_number_list": "", "go_molecular_function": "GO:0015650 lactate:proton symporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q7T3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7T8-1", "uniprot_id": "F1Q7T8_DANRE", "mass": 25827.0, "length": 225, "protein_name": "2.3.1.135; Lecithin retinol acyltransferase a", "gene_name": "lrata", "organism": "Zebrafish", "refseq_name": "lecithin retinol acyltransferase a", "refseq_ac": "NP_001191060", "gene_names_uniprotkb": "lrata; lrat", "gene_names_refseq": "lrata; lrat", "protein_names_uniprotkb": "2.3.1.135; Lecithin retinol acyltransferase a", "protein_names_refseq": "lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase); lecithin retinol acyltransferase a (phosphatidylcholine--retinol O-acyltransferase a); lecithin retinol acyltransferase a (phosphatidylcholine-retinol O-acyltransferase); lecithin retinol acyltransferase a", "tax_id": 7955, "disease": "Leber congenital amaurosis 14 (Disease Ontology:DOID:0110188); retinitis pigmentosa (Disease Ontology:DOID:10584)", "pathway": " (dre:553239)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "17098734;22205629;26794130;27189481;27870848;28208772;29176573;32365517;33429301;36934645", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078235.1, CK678291.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078235.1. On Feb 16, 2011 this sequence version replaced XP_001920173.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NYZ5", "ec_number_list": "", "go_molecular_function": "GO:0047173 phosphatidylcholine-retinol O-acyltransferase activity", "go_cellular_component": "GO:0005791 rough endoplasmic reticulum", "go_biological_process": "GO:0042572 retinol metabolic process;GO:0006776 vitamin A metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1Q7T8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7W7-1", "uniprot_id": "F1Q7W7_DANRE", "mass": 44512.0, "length": 399, "protein_name": "Sphingosine 1-phosphate receptor 5a", "gene_name": "s1pr5a", "organism": "Zebrafish", "refseq_name": "sphingosine 1-phosphate receptor 5a", "refseq_ac": "NP_001007317", "gene_names_uniprotkb": "s1pr5a; fd11a07; s1pr1; wu:fd11a07; zgc:92296", "gene_names_refseq": "fd11a07; s1pr1; s1pr5a; wu:fd11a07; zgc:92296", "protein_names_uniprotkb": "Sphingosine 1-phosphate receptor 5a", "protein_names_refseq": "sphingosine 1-phosphate receptor 5a; sphingosine-1-phosphate receptor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:492350); (R-DRE-418594); (R-DRE-419408)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "22855693;23229546;23616919;26094551;26138676;27189481;28560734;29922649;30451830;31042481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC085656.1, CK027582.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085656.1. On Sep 29, 2011 this sequence version replaced NP_001007317.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N3A0", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0038036 sphingosine-1-phosphate receptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1Q7W7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q815-1", "uniprot_id": "F1Q815_DANRE", "mass": 62547.0, "length": 578, "protein_name": "Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2", "gene_name": "pyroxd2", "organism": "Zebrafish", "refseq_name": "pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2", "refseq_ac": "NP_001243145", "gene_names_uniprotkb": "pyroxd2; CH73-123I13.4; im:7148034; si:ch73-123i13.4", "gene_names_refseq": "CH73-123I13.4; im:7148034; pyroxd2; si:ch73-123i13.4", "protein_names_uniprotkb": "Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2", "protein_names_refseq": "pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:553066)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;30252882", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091832.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB778447.1 and BC091832.1. On Jan 14, 2012 this sequence version replaced XP_002664259.2. Sequence Note: This RefSeq record was created from transcripts of different strains because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]; Probable oxidoreductase that may play a role as regulator of mitochondrial function., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3E6", "ec_number_list": "", "go_molecular_function": "GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005759 mitochondrial matrix", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1Q815-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q837-1", "uniprot_id": "F1Q837_DANRE", "mass": 24366.0, "length": 219, "protein_name": "LHFPL tetraspan subfamily member 5 protein", "gene_name": "lhfpl5a", "organism": "Zebrafish", "refseq_name": "LHFPL tetraspan subfamily member 5 protein", "refseq_ac": "XP_017213895", "gene_names_uniprotkb": "lhfpl5a", "gene_names_refseq": "lhfpl5a", "protein_names_uniprotkb": "LHFPL tetraspan subfamily member 5 protein", "protein_names_refseq": "LHFPL tetraspan subfamily member 5 protein", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 67 (Disease Ontology:DOID:0110518)", "pathway": " (dre:558325)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z1V7;A0AC58GRK6;A0AC58GRL5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007605 sensory perception of sound;GO:0061512 protein localization to cilium;GO:0050974 detection of mechanical stimulus involved in sensory perception;GO:0060122 inner ear receptor cell stereocilium organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q837-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q864-1", "uniprot_id": "F1Q864_DANRE", "mass": 38001.0, "length": 342, "protein_name": "Protein GRINL1A", "gene_name": "polr2m", "organism": "Zebrafish", "refseq_name": "protein GRINL1A", "refseq_ac": "NP_001333109", "gene_names_uniprotkb": "polr2m; si:ch211-94n14.3", "gene_names_refseq": "polr2m; si:ch211-94n14.3", "protein_names_uniprotkb": "Protein GRINL1A", "protein_names_refseq": "polymerase (RNA) II (DNA directed) polypeptide M; polymerase (RNA) II subunit M; protein GRINL1A", "tax_id": 7955, "disease": "", "pathway": " (dre:100003720)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "29729476", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01015103.1, GDQH01028624.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Dec 9, 2025 this sequence version replaced NP_001333109.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9J9", "ec_number_list": "", "go_molecular_function": "GO:0003711 transcription elongation factor activity", "go_cellular_component": "GO:0031674 I band;GO:0005665 RNA polymerase II, core complex", "go_biological_process": "GO:0006368 transcription elongation by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1Q864-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q898-1", "uniprot_id": "F1Q898_DANRE", "mass": 41540.0, "length": 380, "protein_name": "Protein LSM14 homolog B", "gene_name": "lsm14b", "organism": "Zebrafish", "refseq_name": "protein LSM14 homolog B", "refseq_ac": "NP_956465", "gene_names_uniprotkb": "lsm14b; zgc:55673", "gene_names_refseq": "lsm14b; zgc:55673", "protein_names_uniprotkb": "Protein LSM14 homolog B", "protein_names_refseq": "LSM14B, SCD6 homolog B; protein LSM14 homolog B; zRAP55", "tax_id": 7955, "disease": "", "pathway": " (dre:393140)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "20979248;27189481;28381614;31307377;35065906;38898112", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045423.1, GFIL01025548.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898399, SAMEA898400 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1, EH490318.1 and BC153496.1. On or before Jun 6, 2009 this sequence version replaced NP_001099154.1, NP_956465.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; ZRAP55 might function in the control of protein translation at the early stages of oogenesis in zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PE55", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006417 regulation of translation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1Q898-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q8B5-1", "uniprot_id": "F1Q8B5_DANRE", "mass": 216637.0, "length": 1900, "protein_name": "Lactase/phlorizin hydrolase isoform X1", "gene_name": "LOC559107", "organism": "Zebrafish", "refseq_name": "lactase/phlorizin hydrolase isoform X1", "refseq_ac": "XP_021334699", "gene_names_uniprotkb": "LOC559107", "gene_names_refseq": "LOC559107", "protein_names_uniprotkb": "Lactase/phlorizin hydrolase isoform X1", "protein_names_refseq": "lactase/phlorizin hydrolase isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:559107); (R-DRE-189085)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9QBK5", "ec_number_list": "", "go_molecular_function": "GO:0008422 beta-glucosidase activity;GO:0000016 lactase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0098591 external side of apical plasma membrane", "go_biological_process": "GO:0005990 lactose catabolic process;GO:2000892 cellobiose catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q8B5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q8C1-1", "uniprot_id": "F1Q8C1_DANRE", "mass": 54775.0, "length": 487, "protein_name": "3.4.22.68; Sentrin-specific protease 5", "gene_name": "senp5", "organism": "Zebrafish", "refseq_name": "sentrin-specific protease 5", "refseq_ac": "NP_001073666", "gene_names_uniprotkb": "senp5; si:ch211-258l4.2; si:ch211-258l4.3", "gene_names_refseq": "senp5; si:ch211-258l4.2; si:ch211-258l4.3", "protein_names_uniprotkb": "3.4.22.68; Sentrin-specific protease 5", "protein_names_refseq": "SUMO/sentrin specific peptidase 5; SUMO/sentrin specific protease 5; SUMO1/sentrin specific peptidase 5; sentrin-specific protease 5", "tax_id": 7955, "disease": "", "pathway": " (dre:570299); (R-DRE-3065679)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "12477932;21873635;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01041938.1, GDQH01017762.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Jun 25, 2025 this sequence version replaced NP_001073666.2. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYK4", "ec_number_list": "3.4.22.68", "go_molecular_function": "GO:0016929 deSUMOylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006508 proteolysis;GO:0016926 protein desumoylation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1Q8C1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q8F1-1", "uniprot_id": "F1Q8F1_DANRE", "mass": 54195.0, "length": 469, "protein_name": "Internexin neuronal intermediate filament protein, alpha b", "gene_name": "inab", "organism": "Zebrafish", "refseq_name": "internexin neuronal intermediate filament protein, alpha b", "refseq_ac": "NP_571107", "gene_names_uniprotkb": "inab; gefiltin; zgc:110516", "gene_names_refseq": "gefiltin; inab; zgc:110516", "protein_names_uniprotkb": "Internexin neuronal intermediate filament protein, alpha b", "protein_names_refseq": "etID309796.1; ina; internexin neuronal intermediate filament protein, alpha b", "tax_id": 7955, "disease": "", "pathway": " (dre:30230)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10653354;19174923;19562753;20528263;21965609;28300160;30387501;33618456;34991727;38017520", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: U89710.1, GFIL01013390.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Aug 18, 2015 this sequence version replaced NP_571107.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZF7", "ec_number_list": "", "go_molecular_function": "GO:0099184 structural constituent of postsynaptic intermediate filament cytoskeleton", "go_cellular_component": "GO:0005882 intermediate filament;GO:0099160 postsynaptic intermediate filament cytoskeleton", "go_biological_process": "GO:0048812 neuron projection morphogenesis;GO:0045109 intermediate filament organization", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1Q8F1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q8T4-1", "uniprot_id": "F1Q8T4_DANRE", "mass": 114781.0, "length": 1032, "protein_name": "Integrin alpha-9", "gene_name": "itga9", "organism": "Zebrafish", "refseq_name": "integrin alpha-9 precursor", "refseq_ac": "NP_001311427", "gene_names_uniprotkb": "itga9; zgc:63474", "gene_names_refseq": "itga9; zgc:63474", "protein_names_uniprotkb": "Integrin alpha-9", "protein_names_refseq": "integrin alpha-9 precursor", "tax_id": 7955, "disease": "congenital chylothorax (Disease Ontology:DOID:0060646); hypertension (Disease Ontology:DOID:10763); pancreatic cancer (Disease Ontology:DOID:1793); cerebral infarction (Disease Ontology:DOID:3526); lung non-small cell carcinoma (Disease Ontology:DOID:3908)", "pathway": " (dre:394012); (R-DRE-216083); (R-DRE-3000178)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "22047996;23326562;24346703;25745057;26420840;29871925;30635353;31042481;31564611;35531980", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01020678.1, GFIL01013551.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On May 8, 2016 this sequence version replaced XP_009305870.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P353", "ec_number_list": "", "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0009986 cell surface;GO:0034679 integrin alpha9-beta1 complex", "go_biological_process": "GO:0007229 integrin-mediated signaling pathway;GO:0098609 cell-cell adhesion;GO:0001946 lymphangiogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1Q8T4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q8W5-1", "uniprot_id": "F1Q8W5_DANRE", "mass": 46011.0, "length": 409, "protein_name": "Plasmalemma vesicle associated protein b", "gene_name": "plvapb", "organism": "Zebrafish", "refseq_name": "plasmalemma vesicle associated protein b", "refseq_ac": "NP_001025415", "gene_names_uniprotkb": "plvapb; fb11a07; plvap; vsg1; wu:fb11a07; zgc:113451; zgc:136228", "gene_names_refseq": "fb11a07; plvapb; plvap; vsg1; wu:fb11a07; zgc:113451; zgc:136228", "protein_names_uniprotkb": "Plasmalemma vesicle associated protein b", "protein_names_refseq": "plasmalemma vesicle associated protein b; vessel-specific 1; zvsg1", "tax_id": 7955, "disease": "congenital diarrhea (Disease Ontology:DOID:0060774)", "pathway": " (dre:570276)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "18094332;19797767;22516065;23625115;24683187;30449506;31705559;31740533;37437574;37759531", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC117570.1, AY972159.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC117570.1 and BC091873.1. On or before May 23, 2007 this sequence version replaced NP_001014386.1, NP_001025415.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7E0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0007219 Notch signaling pathway;GO:0043114 regulation of vascular permeability;GO:0002693 positive regulation of cellular extravasation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1Q8W5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q977-1", "uniprot_id": "F1Q977_DANRE", "mass": 50581.0, "length": 438, "protein_name": "Bloodthirsty-related gene family, member 2", "gene_name": "btr02", "organism": "Zebrafish", "refseq_name": "bloodthirsty-related gene family, member 2", "refseq_ac": "NP_001070626", "gene_names_uniprotkb": "btr02; wu:fc66g05; zgc:153136", "gene_names_refseq": "btr02; wu:fc66g05; zgc:153136", "protein_names_uniprotkb": "Bloodthirsty-related gene family, member 2", "protein_names_refseq": "bloodthirsty like; bloodthirsty-related gene family, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:562439); (R-DRE-844456); (R-DRE-9755511); (R-DRE-983168)", "pathway_count": 4, "publication_count": 4, "publication_id_list": "19196451;21789205;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122154.1, GFIL01002623.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jan 26, 2011 this sequence version replaced NP_001070626.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NB77", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1Q977-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q9E9-1", "uniprot_id": "F1Q9E9_DANRE", "mass": 151092.0, "length": 1341, "protein_name": "Breakpoint cluster region protein isoform X1", "gene_name": "bcr", "organism": "Zebrafish", "refseq_name": "breakpoint cluster region protein isoform X1", "refseq_ac": "XP_002665983", "gene_names_uniprotkb": "bcr", "gene_names_refseq": "bcr", "protein_names_uniprotkb": "Breakpoint cluster region protein isoform X1", "protein_names_refseq": "breakpoint cluster region protein isoform X1", "tax_id": 7955, "disease": "leukemia (Disease Ontology:DOID:1240); chronic myeloid leukemia (Disease Ontology:DOID:8552); acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:568320); (R-DRE-8980692); (R-DRE-9013026); (R-DRE-9013106); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013423)", "pathway_count": 8, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002665983.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RL18", "ec_number_list": "", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005096 GTPase activator activity;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0016020 membrane;GO:0030424 axon;GO:0043197 dendritic spine", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q9E9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q9I7-1", "uniprot_id": "F1Q9I7_DANRE", "mass": 74030.0, "length": 659, "protein_name": "Sorting nexin-1", "gene_name": "snx1a", "organism": "Zebrafish", "refseq_name": "sorting nexin-1a", "refseq_ac": "NP_001122143", "gene_names_uniprotkb": "snx1a; d254; sb:cb923; snx1; wu:fb40c08; wu:fj65g09", "gene_names_refseq": "d254; sb:cb923; snx1a; snx1; wu:fb40c08; wu:fj65g09", "protein_names_uniprotkb": "Sorting nexin-1", "protein_names_refseq": "sorting nexin 1; sorting nexin-1a", "tax_id": 7955, "disease": "", "pathway": " (dre:337386)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "22213104;26469318;28252024;29145093;34462354", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01007023.1, GDQH01002038.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Dec 2, 2025 this sequence version replaced NP_001122143.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHR8", "ec_number_list": "", "go_molecular_function": "GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0030027 lamellipodium;GO:0031901 early endosome membrane", "go_biological_process": "GO:0015031 protein transport;GO:0034498 early endosome to Golgi transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1Q9I7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q9K7-1", "uniprot_id": "F1Q9K7_DANRE", "mass": 48810.0, "length": 420, "protein_name": "Heparan-sulfate 6-O-sulfotransferase", "gene_name": "hs6st3a", "organism": "Zebrafish", "refseq_name": "heparan-sulfate 6-O-sulfotransferase 3-B-like", "refseq_ac": "XP_001332046", "gene_names_uniprotkb": "hs6st3a", "gene_names_refseq": "hs6st3a", "protein_names_uniprotkb": "Heparan-sulfate 6-O-sulfotransferase; 2.8.2.-", "protein_names_refseq": "heparan-sulfate 6-O-sulfotransferase 3-B-like", "tax_id": 7955, "disease": "", "pathway": " (dre:792524)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001332046.3. COMPLETENESS: full length., [RefSeq]; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PU32", "ec_number_list": "2.8.2.-", "go_molecular_function": "GO:0017095 heparan sulfate 6-sulfotransferase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0015012 heparan sulfate proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q9K7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q9M4-1", "uniprot_id": "F1Q9M4_DANRE", "mass": 72439.0, "length": 651, "protein_name": "Choline transporter-like protein", "gene_name": "slc44a1a", "organism": "Zebrafish", "refseq_name": "choline transporter-like protein 1", "refseq_ac": "XP_002660627", "gene_names_uniprotkb": "slc44a1a", "gene_names_refseq": "slc44a1a", "protein_names_uniprotkb": "Choline transporter-like protein", "protein_names_refseq": "choline transporter-like protein 1", "tax_id": 7955, "disease": "high grade glioma (Disease Ontology:DOID:3070)", "pathway": " (dre:100333377); (R-DRE-1483191); (R-DRE-6798163); (R-DRE-9958517)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002660627.1. COMPLETENESS: full length., [RefSeq]; Choline transporter., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RH24", "ec_number_list": "", "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0007605 sensory perception of sound", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q9M4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q9R5-1", "uniprot_id": "F1Q9R5_DANRE", "mass": 53057.0, "length": 472, "protein_name": "1.16.1.9; Metalloreductase STEAP4", "gene_name": "steap4", "organism": "Zebrafish", "refseq_name": "metalloreductase STEAP4", "refseq_ac": "NP_001017734", "gene_names_uniprotkb": "steap4; si:dkey-53p21.1; zgc:112143", "gene_names_refseq": "si:dkey-53p21.1; steap4; zgc:112143", "protein_names_uniprotkb": "1.16.1.9; Metalloreductase STEAP4", "protein_names_refseq": "metalloreductase STEAP4", "tax_id": 7955, "disease": "", "pathway": " (dre:550429); (R-DRE-917977)", "pathway_count": 2, "publication_count": 8, "publication_id_list": "15520368;19631987;20851470;23586901;24683187;25086293;26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093220.1, SRR32588724.1057747.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476740, SAMEA4476784 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On or before Mar 10, 2018 this sequence version replaced XP_017206994.1, NP_001017734.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z203", "ec_number_list": "1.16.1.9", "go_molecular_function": "GO:0046872 metal ion binding;GO:0008823 cupric reductase (NADH) activity;GO:0052851 ferric-chelate reductase (NADPH) activity", "go_cellular_component": "GO:0005768 endosome;GO:0005886 plasma membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0015677 copper ion import;GO:0006826 iron ion transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1Q9R5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q9S0-1", "uniprot_id": "F1Q9S0_DANRE", "mass": 52142.0, "length": 469, "protein_name": "Paired box protein Pax-3b", "gene_name": "pax3b", "organism": "Zebrafish", "refseq_name": "paired box protein Pax-3b", "refseq_ac": "NP_001315326", "gene_names_uniprotkb": "pax3b", "gene_names_refseq": "pax3b", "protein_names_uniprotkb": "Paired box protein Pax-3b", "protein_names_refseq": "paired box gene 3b; paired box protein Pax-3b", "tax_id": 7955, "disease": "neural tube defect (Disease Ontology:DOID:0080074); Waardenburg syndrome type 1 (Disease Ontology:DOID:0110948); Waardenburg syndrome type 3 (Disease Ontology:DOID:0110949); craniofacial-deafness-hand syndrome (Disease Ontology:DOID:0111336); alveolar rhabdomyosarcoma (Disease Ontology:DOID:4051); Waardenburg syndrome (Disease Ontology:DOID:9258)", "pathway": " (dre:100150137)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "18417109;19409884;20333216;23760954;24045113;32914578;33001028;34214631;34435397;36229514", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.13732068.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Loss of pax3b function led to defective migratory muscle precursors migration and oesophageal striated muscle formation, disorganised sternohyoid muscle differentiation, and inefficient ingestion and swallowing of microspheres. Erratum:[Development. 2013 Oct;140(20):4296], [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9W6", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development;GO:0009952 anterior/posterior pattern specification;GO:0030182 neuron differentiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1Q9S0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q9V8-1", "uniprot_id": "F1Q9V8_DANRE", "mass": 59125.0, "length": 531, "protein_name": "Mesoderm induction early response protein 3a", "gene_name": "mier3a", "organism": "Zebrafish", "refseq_name": "mesoderm induction early response protein 3a", "refseq_ac": "NP_001025320", "gene_names_uniprotkb": "mier3a; mier3; zgc:114199", "gene_names_refseq": "mier3a; mier3; zgc:114199", "protein_names_uniprotkb": "Mesoderm induction early response protein 3a", "protein_names_refseq": "mesoderm induction early response protein 3a", "tax_id": 7955, "disease": "breast cancer (Disease Ontology:DOID:1612); invasive ductal carcinoma (Disease Ontology:DOID:3008); lung non-small cell carcinoma (Disease Ontology:DOID:3908); lung adenocarcinoma (Disease Ontology:DOID:3910)", "pathway": " (dre:560884)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "24240475;26469318;27189481", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N785", "ec_number_list": "", "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0042826 histone deacetylase binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0032991 protein-containing complex", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1Q9V8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QA42-1", "uniprot_id": "F1QA42_DANRE", "mass": 106776.0, "length": 1004, "protein_name": "Ataxin-2-like protein", "gene_name": "atxn2l", "organism": "Zebrafish", "refseq_name": "ataxin-2-like protein", "refseq_ac": "NP_997849", "gene_names_uniprotkb": "atxn2l; wu:fc31f08; wu:fi19h05; zgc:66471", "gene_names_refseq": "atxn2l; wu:fc31f08; wu:fi19h05; zgc:66471", "protein_names_uniprotkb": "Ataxin-2-like protein", "protein_names_refseq": "ataxin-2-like protein", "tax_id": 7955, "disease": "spinocerebellar ataxia 2 (Disease Ontology:DOID:0050955); chromosome 16p11.2 deletion syndrome, 593-kb (Disease Ontology:DOID:0070515); autosomal dominant cerebellar ataxia (Disease Ontology:DOID:1441)", "pathway": " (dre:324525)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "35481478", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC057536.1, SRR26395012.933940.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 25, 2025 this sequence version replaced NP_997849.2., [RefSeq]", "predicted_glycosites": 6, "predicted_n_glycosites": 0, "predicted_o_glycosites": 6, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BAY3", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0034063 stress granule assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1QA42-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAA1-1", "uniprot_id": "F1QAA1_DANRE", "mass": 143865.0, "length": 1329, "protein_name": "Protocadherin-7", "gene_name": "pcdh7a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "pcdh7a", "gene_names_refseq": "", "protein_names_uniprotkb": "Protocadherin-7", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:568198)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B6I4", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding;GO:0050839 cell adhesion molecule binding", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005886 plasma membrane", "go_biological_process": "GO:0007155 cell adhesion;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QAA1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAB3-1", "uniprot_id": "F1QAB3_DANRE", "mass": 125091.0, "length": 1208, "protein_name": "Collagen alpha-1(XXVIII) chain", "gene_name": "col28a2a", "organism": "Zebrafish", "refseq_name": "collagen, type XXVIII, alpha 2a precursor", "refseq_ac": "NP_001153314", "gene_names_uniprotkb": "col28a2a; si:dkey-211m23.2; wu:fd06c09", "gene_names_refseq": "col28a2a; si:dkey-211m23.2; wu:fd06c09", "protein_names_uniprotkb": "Collagen alpha-1(XXVIII) chain", "protein_names_refseq": "collagen, type XXVIII, alpha 2a precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100294690)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "21787765;26235539;26469318;27189481;30312775", "class_list": "", "function": "##Evidence-Data-START## CDS exon combination :: SRR32588723.2629962.1 [ECO:0000331] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Dec 5, 2025 this sequence version replaced NP_001153314.2. Sequence Note:., [RefSeq]; May act as a cell-binding protein., [UniProtKB, UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUC2", "ec_number_list": "", "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity;GO:0030020 extracellular matrix structural constituent conferring tensile strength", "go_cellular_component": "GO:0031012 extracellular matrix;GO:0005604 basement membrane;GO:0005594 collagen type IX trimer", "go_biological_process": "GO:0007155 cell adhesion;GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QAB3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAE0-1", "uniprot_id": "F1QAE0_DANRE", "mass": 59838.0, "length": 522, "protein_name": "Cytochrome P450 27A1.4", "gene_name": "cyp27a1.4", "organism": "Zebrafish", "refseq_name": "cytochrome P450 27A1.4", "refseq_ac": "NP_001315442", "gene_names_uniprotkb": "cyp27a1.4; si:dkeyp-68f9.12; wu:fb58e08", "gene_names_refseq": "cyp27a1.4; si:dkeyp-68f9.12; wu:fb58e08", "protein_names_uniprotkb": "Cytochrome P450 27A1.4", "protein_names_refseq": "cytochrome P450 27A1.4", "tax_id": 7955, "disease": "", "pathway": " (dre:322341)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "22590621;25290078;26469318;27189481;28514663;32459962;33356191;34066767;34356784;35151729", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095716.1, GFIL01007914.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1 and EH588054.1. On Jun 16, 2016 this sequence version replaced XP_009303131.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P998", "ec_number_list": "", "go_molecular_function": "GO:0031073 cholesterol 26-hydroxylase activity;GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0030343 vitamin D3 25-hydroxylase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0036378 calcitriol biosynthetic process from calciol", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QAE0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAE5-1", "uniprot_id": "F1QAE5_DANRE", "mass": 75859.0, "length": 690, "protein_name": "Adhesion G protein-coupled receptor E3", "gene_name": "adgre10", "organism": "Zebrafish", "refseq_name": "adhesion G protein-coupled receptor E3", "refseq_ac": "XP_021333746", "gene_names_uniprotkb": "adgre10", "gene_names_refseq": "adgre10", "protein_names_uniprotkb": "Adhesion G protein-coupled receptor E3", "protein_names_refseq": "adhesion G protein-coupled receptor E3", "tax_id": 7955, "disease": "", "pathway": " (dre:569655); (R-DRE-373080); (R-DRE-6798695)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9QD97;A0AC58FZM5;A0AC58FZM9;A0AC58FZY3", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway;GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QAE5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAI8-1", "uniprot_id": "F1QAI8_DANRE", "mass": 50494.0, "length": 446, "protein_name": "Kynurenine--oxoglutarate transaminase 1", "gene_name": "kyat1", "organism": "Zebrafish", "refseq_name": "kynurenine--oxoglutarate transaminase 1", "refseq_ac": "NP_998524", "gene_names_uniprotkb": "kyat1; ccbl1; zgc:63644", "gene_names_refseq": "ccbl1; kyat1; zgc:63644", "protein_names_uniprotkb": "Kynurenine--oxoglutarate transaminase 1", "protein_names_refseq": "cysteine conjugate-beta lyase, cytoplasmic; glutamine transaminase K, kyneurenine aminotransferase; kynurenine--oxoglutarate transaminase 1", "tax_id": 7955, "disease": "", "pathway": " (dre:791592); (R-DRE-71240); (R-DRE-8964208); (R-DRE-8964539)", "pathway_count": 4, "publication_count": 6, "publication_id_list": "16109975;16448862;19159490;24002024;26469318;27292017", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055182.1, SRR26395028.1284705.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH538028.1, JBMGRA010000005.1 and DT059481.1. On or before Feb 13, 2016 this sequence version replaced XP_005171978.1, NP_998524.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PF14", "ec_number_list": "4.4.1.13;2.6.1.63;2.6.1.7;2.6.1.39;2.6.1.4;2.6.1.73;2.6.1.1", "go_molecular_function": "GO:0016212 kynurenine-oxoglutarate transaminase activity;GO:0030170 pyridoxal phosphate binding;GO:0047804 cysteine-S-conjugate beta-lyase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0070189 kynurenine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QAI8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAM5-1", "uniprot_id": "F1QAM5_DANRE", "mass": 48909.0, "length": 440, "protein_name": "Equilibrative nucleoside transporter 1a isoform X1", "gene_name": "slc29a1a", "organism": "Zebrafish", "refseq_name": "equilibrative nucleoside transporter 1a isoform X1", "refseq_ac": "XP_009305861", "gene_names_uniprotkb": "slc29a1a; slc29a1; zgc:113383", "gene_names_refseq": "slc29a1a; slc29a1; zgc:113383", "protein_names_uniprotkb": "Equilibrative nucleoside transporter 1a isoform X1", "protein_names_refseq": "equilibrative nucleoside transporter 1a isoform X1", "tax_id": 7955, "disease": "alcohol dependence (Disease Ontology:DOID:0050741); brain ischemia (Disease Ontology:DOID:2316); diffuse idiopathic skeletal hyperostosis (Disease Ontology:DOID:6652)", "pathway": " (R-DRE-83936); (R-DRE-9748787); (R-DRE-9755088)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B5J0;A0AC58H1C6", "ec_number_list": "", "go_molecular_function": "GO:0015213 uridine transmembrane transporter activity;GO:0005337 nucleoside transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane", "go_biological_process": "GO:0015862 uridine transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QAM5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAR3-1", "uniprot_id": "F1QAR3_DANRE", "mass": 54700.0, "length": 490, "protein_name": "Phosphatidylinositol-glycan biosynthesis class W protein", "gene_name": "pigw", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol-glycan biosynthesis class W protein", "refseq_ac": "NP_001108044", "gene_names_uniprotkb": "pigw; zgc:175274", "gene_names_refseq": "pigw; zgc:175274", "protein_names_uniprotkb": "Phosphatidylinositol-glycan biosynthesis class W protein; 2.3.-.-", "protein_names_refseq": "phosphatidylinositol-glycan biosynthesis class W protein", "tax_id": 7955, "disease": "hyperphosphatasia with impaired intellectual development syndrome 5 (Disease Ontology:DOID:0070432)", "pathway": " (dre:100136853); (R-DRE-162710)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "12477932;21873635;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC098533.1, GDQQ01022926.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505379 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Oct 7, 2011 this sequence version replaced NP_001108044.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; A acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHN2", "ec_number_list": "2.3.-.-", "go_molecular_function": "GO:0032216 glucosaminyl-phosphatidylinositol O-acyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006506 GPI anchor biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QAR3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAU7-1", "uniprot_id": "F1QAU7_DANRE", "mass": 75953.0, "length": 668, "protein_name": "Dihydroxyacetone phosphate acyltransferase", "gene_name": "gnpat", "organism": "Zebrafish", "refseq_name": "dihydroxyacetone phosphate acyltransferase", "refseq_ac": "XP_002665694", "gene_names_uniprotkb": "gnpat", "gene_names_refseq": "gnpat", "protein_names_uniprotkb": "Dihydroxyacetone phosphate acyltransferase", "protein_names_refseq": "dihydroxyacetone phosphate acyltransferase", "tax_id": 7955, "disease": "rhizomelic chondrodysplasia punctata type 2 (Disease Ontology:DOID:0110852); disease of mental health (Disease Ontology:DOID:150)", "pathway": " (dre:572335); (R-DRE-1483166); (R-DRE-75896)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002665694.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RE83", "ec_number_list": "", "go_molecular_function": "GO:0016287 glycerone-phosphate O-acyltransferase activity", "go_cellular_component": "GO:0005778 peroxisomal membrane", "go_biological_process": "GO:0008611 ether lipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QAU7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAX0-1", "uniprot_id": "F1QAX0_DANRE", "mass": 52399.0, "length": 469, "protein_name": "Splicing factor ESS-2 homolog", "gene_name": "ess2", "organism": "Zebrafish", "refseq_name": "splicing factor ESS-2 homolog", "refseq_ac": "NP_001082799", "gene_names_uniprotkb": "ess2; dgcr14; fc19d10; wu:fc19d10; zgc:162979", "gene_names_refseq": "dgcr14; ess2; fc19d10; wu:fc19d10; zgc:162979", "protein_names_uniprotkb": "Splicing factor ESS-2 homolog", "protein_names_refseq": "DiGeorge syndrome critical region gene 14; ess-2 splicing factor homolog; splicing factor ESS-2 homolog", "tax_id": 7955, "disease": "DiGeorge syndrome (Disease Ontology:DOID:11198); velocardiofacial syndrome (Disease Ontology:DOID:12583)", "pathway": " (dre:324123)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26137170;37794116", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: ERR6511329.478398.1, SRR32588715.425593.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jun 25, 2025 this sequence version replaced NP_001082799.2. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by partial transcript alignments and orthologous alignments., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCU3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0071013 catalytic step 2 spliceosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QAX0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAY0-1", "uniprot_id": "F1QAY0_DANRE", "mass": 30690.0, "length": 273, "protein_name": "RNA-binding protein Raly isoform X1", "gene_name": "raly", "organism": "Zebrafish", "refseq_name": "RNA-binding protein Raly isoform X1", "refseq_ac": "XP_005172160", "gene_names_uniprotkb": "raly; zgc:103445", "gene_names_refseq": "raly; zgc:103445", "protein_names_uniprotkb": "RNA-binding protein Raly isoform X1", "protein_names_refseq": "RNA-binding protein Raly isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:402903)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BJH7;A0AC58JQW4", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QAY0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QAZ3-1", "uniprot_id": "F1QAZ3_DANRE", "mass": 86578.0, "length": 783, "protein_name": "MICAL-like protein 1", "gene_name": "micall2b", "organism": "Zebrafish", "refseq_name": "protein-methionine sulfoxide oxidase mical2b", "refseq_ac": "NP_001299826", "gene_names_uniprotkb": "micall2b; MICAL-2; fi19c04; wu:fi19c04; zgc:55983; zgc:66216", "gene_names_refseq": "MICAL-2; fi19c04; micall2b; wu:fi19c04; zgc:55983; zgc:66216", "protein_names_uniprotkb": "MICAL-like protein 1", "protein_names_refseq": "MICAL-like 2; MICAL-like protein 2; molecule interacting with CasL protein 2B; molecule interacting with CasL-like 2b; protein-methionine sulfoxide oxidase mical2b", "tax_id": 7955, "disease": "", "pathway": " (dre:556298)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "21035094;24346703;26469318;28416812;31193955", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01026465.1, SRR26395050.1090410.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Aug 21, 2015 this sequence version replaced XP_005170919.1. Transcript Variant: This variant (1) encodes the functional protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Data established an important basis for further functional studies of mical family genes in zebrafish, and suggest a possible role for mical genes in cardiovascular development., [RefSeq, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2F9", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0051015 actin filament binding;GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0031902 late endosome membrane;GO:0055038 recycling endosome membrane;GO:0005814 centriole;GO:0060170 ciliary membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0015031 protein transport;GO:0030036 actin cytoskeleton organization;GO:0036269 swimming behavior;GO:0032456 endocytic recycling", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QAZ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QB03-1", "uniprot_id": "F1QB03_DANRE", "mass": 25422.0, "length": 233, "protein_name": "Claudin", "gene_name": "cldnf", "organism": "Zebrafish", "refseq_name": "claudin f", "refseq_ac": "NP_571841", "gene_names_uniprotkb": "cldnf; cldn28d; sr:nyz177; wu:fb13d10; zgc:109866", "gene_names_refseq": "cldn28d; cldnf; sr:nyz177; wu:fb13d10; zgc:109866", "protein_names_uniprotkb": "Claudin", "protein_names_refseq": "claudin f", "tax_id": 7955, "disease": "", "pathway": " (dre:81585)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "15197168;20553723;21600298;22931925;23726886;26469318;26692521;26726070", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: AF359424.1, SRR26395014.1366761.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Jan 6, 2017 this sequence version replaced NP_571841.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Claudins function as major constituents of the tight junction complexes that regulate the permeability of epithelia., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PCW1", "ec_number_list": "", "go_molecular_function": "GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005923 bicellular tight junction", "go_biological_process": "GO:0160184 paracellular transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1QB03-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QB27-1", "uniprot_id": "F1QB27_DANRE", "mass": 28666.0, "length": 255, "protein_name": "Borealin-2 isoform 1", "gene_name": "cdca9", "organism": "Zebrafish", "refseq_name": "borealin-2 isoform 1", "refseq_ac": "NP_001189355", "gene_names_uniprotkb": "cdca9; Dasra A; Dasra-A; cdca8.2", "gene_names_refseq": "Dasra A; Dasra-A; cdca8.2; cdca9", "protein_names_uniprotkb": "Borealin-2 isoform 1", "protein_names_refseq": "borealin-2 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100151622)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15260989;26487724;27267667;35641933", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH537403.1, EH541214.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898400, SAMN18715719 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH549196.1, EH447881.1 and BM036885.1. On or before Jan 30, 2011 this sequence version replaced XP_001923757.1, XP_001923760.1, XP_001923756.1. Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1 and 2 encode the same protein., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3J8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region", "go_biological_process": "GO:0051301 cell division", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QB27-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QBM2-1", "uniprot_id": "F1QBM2_DANRE", "mass": 52022.0, "length": 467, "protein_name": "Programmed cell death protein 4", "gene_name": "pdcd4a", "organism": "Zebrafish", "refseq_name": "programmed cell death protein 4a isoform X1", "refseq_ac": "XP_005159942", "gene_names_uniprotkb": "pdcd4a; wu:fa55g03; wu:fb08a11; wu:fe01a02; zgc:66311", "gene_names_refseq": "pdcd4a; wu:fa55g03; wu:fb08a11; wu:fe01a02; zgc:66311", "protein_names_uniprotkb": "Programmed cell death protein 4", "protein_names_refseq": "programmed cell death protein 4a isoform X1", "tax_id": 7955, "disease": "skin melanoma (Disease Ontology:DOID:8923)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B6S0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QBM2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QBW2-1", "uniprot_id": "F1QBW2_DANRE", "mass": 121919.0, "length": 1095, "protein_name": "Solute carrier family 12 member 4", "gene_name": "slc12a4", "organism": "Zebrafish", "refseq_name": "solute carrier family 12 member 4", "refseq_ac": "XP_691291", "gene_names_uniprotkb": "slc12a4", "gene_names_refseq": "slc12a4", "protein_names_uniprotkb": "Solute carrier family 12 member 4", "protein_names_refseq": "solute carrier family 12 member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:562826); (R-DRE-426117)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_691291.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TF28", "ec_number_list": "", "go_molecular_function": "GO:0015379 potassium:chloride symporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0007268 chemical synaptic transmission;GO:0006884 cell volume homeostasis;GO:1902476 chloride transmembrane transport;GO:0055075 potassium ion homeostasis;GO:1990573 potassium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QBW2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QBW9-1", "uniprot_id": "F1QBW9_DANRE", "mass": 18472.0, "length": 155, "protein_name": "CS domain-containing protein", "gene_name": "ptges3l", "organism": "Zebrafish", "refseq_name": "putative protein PTGES3L", "refseq_ac": "NP_001313640", "gene_names_uniprotkb": "ptges3l; si:ch211-131k2.3", "gene_names_refseq": "ptges3l; si:ch211-131k2.3", "protein_names_uniprotkb": "CS domain-containing protein", "protein_names_refseq": "putative protein PTGES3L", "tax_id": 7955, "disease": "", "pathway": " (dre:566751)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P869", "ec_number_list": "", "go_molecular_function": "GO:0051087 protein-folding chaperone binding;GO:0051879 Hsp90 protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006457 protein folding;GO:0051131 chaperone-mediated protein complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1QBW9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QC03-1", "uniprot_id": "F1QC03_DANRE", "mass": 64603.0, "length": 608, "protein_name": "Zyxin", "gene_name": "zyx", "organism": "Zebrafish", "refseq_name": "zyxin isoform X1", "refseq_ac": "XP_021322391", "gene_names_uniprotkb": "zyx; zgc:171680", "gene_names_refseq": "zgc:171680; zyx", "protein_names_uniprotkb": "Zyxin", "protein_names_refseq": "zyxin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:564246)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;33207197", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B4S6", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005925 focal adhesion;GO:0001725 stress fiber;GO:0005856 cytoskeleton", "go_biological_process": "GO:0007155 cell adhesion;GO:0007229 integrin-mediated signaling pathway;GO:0007179 transforming growth factor beta receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QC03-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QC46-1", "uniprot_id": "F1QC46_DANRE", "mass": 203507.0, "length": 1873, "protein_name": "Nuclear pore membrane glycoprotein 210", "gene_name": "nup210", "organism": "Zebrafish", "refseq_name": "nuclear pore membrane glycoprotein 210", "refseq_ac": "XP_002667606", "gene_names_uniprotkb": "nup210", "gene_names_refseq": "nup210", "protein_names_uniprotkb": "Nuclear pore membrane glycoprotein 210", "protein_names_refseq": "nuclear pore membrane glycoprotein 210", "tax_id": 7955, "disease": "", "pathway": " (dre:570945); (R-DRE-159227); (R-DRE-159231); (R-DRE-159236); (R-DRE-1855170); (R-DRE-1855196); (R-DRE-1855229); (R-DRE-191859); (R-DRE-3108214); (R-DRE-3232142); (R-DRE-3301854); (R-DRE-3371453); (R-DRE-4551638)", "pathway_count": 13, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002667606.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RIB6", "ec_number_list": "", "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005643 nuclear pore;GO:0031965 nuclear membrane", "go_biological_process": "GO:0048628 myoblast maturation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QC46-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QCC0-1", "uniprot_id": "F1QCC0_DANRE", "mass": 20338.0, "length": 176, "protein_name": "Troponin I type 2b (Skeletal, fast), tandem duplicate 1 isoform 1; Troponin I type 2b (Skeletal, fast), tandem duplicate 1 isoform 2", "gene_name": "tnni2b.1", "organism": "Zebrafish", "refseq_name": "troponin I type 2b (skeletal, fast), tandem duplicate 1", "refseq_ac": "NP_001129964", "gene_names_uniprotkb": "tnni2b.1; tropI-2a; zgc:110715", "gene_names_refseq": "tnni2b.1; tropI-2a; zgc:110715", "protein_names_uniprotkb": "Troponin I type 2b (Skeletal, fast), tandem duplicate 1 isoform 1; Troponin I type 2b (Skeletal, fast), tandem duplicate 1 isoform 2", "protein_names_refseq": "troponin I type 2b (skeletal, fast), tandem duplicate 1; troponin I, skeletal, fast 2b.1", "tax_id": 7955, "disease": "distal arthrogryposis (Disease Ontology:DOID:0050646); cardiomyopathy (Disease Ontology:DOID:0050700); stroke (Disease Ontology:DOID:0051061); arthrogryposis multiplex congenita (Disease Ontology:DOID:0080954); hypertrophic cardiomyopathy 7 (Disease Ontology:DOID:0110313); dilated cardiomyopathy 1FF (Disease Ontology:DOID:0110459); dilated cardiomyopathy 2A (Disease Ontology:DOID:0110460); familial restrictive cardiomyopathy 1 (Disease Ontology:DOID:0111425); distal arthrogryposis type 2B1 (Disease Ontology:DOID:0111600); heart disease (Disease Ontology:DOID:114); hypertrophic cardiomyopathy (Disease Ontology:DOID:11984); dilated cardiomyopathy (Disease Ontology:DOID:12930); adenocarcinoma (Disease Ontology:DOID:299); coronary artery disease (Disease Ontology:DOID:3393); restrictive cardiomyopathy (Disease Ontology:DOID:397)", "pathway": " (dre:550249)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "18253507;25583992;26469318;26827899;26979795;33203921;34016526;34768802;37100808;38114601", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CT600646.2, CT601853.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT600646.2, EH477096.1 and JBMGRA010000007.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 15, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJH6", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005861 troponin complex", "go_biological_process": "GO:0003009 skeletal muscle contraction;GO:0060048 cardiac muscle contraction", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QCC0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QCE5-1", "uniprot_id": "F1QCE5_DANRE", "mass": 34962.0, "length": 306, "protein_name": "Zinc finger-like gene 2a", "gene_name": "znfl2a", "organism": "Zebrafish", "refseq_name": "zinc finger-like gene 2a", "refseq_ac": "NP_919371", "gene_names_uniprotkb": "znfl2a; YF-458; sb:cb490; wu:fe16e10; zgc:110491; znfl2", "gene_names_refseq": "YF-458; sb:cb490; wu:fe16e10; zgc:110491; znfl2a; znfl2", "protein_names_uniprotkb": "Zinc finger-like gene 2a", "protein_names_refseq": "zinc finger-like gene 2a; zinc finger-like gene 2", "tax_id": 7955, "disease": "", "pathway": " (dre:373087); (R-DRE-3899300)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "12641569;15937927;16532340;18243489;21901140;26039894;26469318;27189481;32849832;35886872", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH504227.1, BC092919.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH504227.1 and EH530411.1. On Apr 4, 2014 this sequence version replaced NP_919371.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; The production of loss-of-function models for znfl2, znfl2b and znfl2/znfl2b together suggested that these erythrocyte specific zinc finger genes are dispensible for erythropoiesis., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PCG8", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0002682 regulation of immune system process;GO:0001817 regulation of cytokine production", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QCE5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QCE9-1", "uniprot_id": "F1QCE9_DANRE", "mass": 17244.0, "length": 153, "protein_name": "Acyl carrier protein", "gene_name": "ndufab1b", "organism": "Zebrafish", "refseq_name": "NADH:ubiquinone oxidoreductase subunit AB1b", "refseq_ac": "NP_001292498", "gene_names_uniprotkb": "ndufab1b; ndufab1; wu:fd05g01", "gene_names_refseq": "ndufab1b; ndufab1; wu:fd05g01", "protein_names_uniprotkb": "Acyl carrier protein", "protein_names_refseq": "NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1b; NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1; NADH:ubiquinone oxidoreductase subunit AB1b", "tax_id": 7955, "disease": "neurodegeneration with brain iron accumulation (Disease Ontology:DOID:0110734)", "pathway": " (dre:325712)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "21951302;22116938;23988502;26469318;26854857;28252024;33548715", "class_list": "", "function": "Carrier of the growing fatty acid chain in fatty acid biosynthesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1B3", "ec_number_list": "", "go_molecular_function": "GO:0000035 acyl binding;GO:0000036 acyl carrier activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0031966 mitochondrial membrane;GO:0045271 respiratory chain complex I", "go_biological_process": "GO:0022904 respiratory electron transport chain", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1QCE9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QCH5-1", "uniprot_id": "F1QCH5_DANRE", "mass": 37050.0, "length": 333, "protein_name": "Proprotein convertase subtilisin/kexin type 1 inhibitor, like precursor", "gene_name": "pcsk1nl", "organism": "Zebrafish", "refseq_name": "proprotein convertase subtilisin/kexin type 1 inhibitor, like precursor", "refseq_ac": "NP_001159601", "gene_names_uniprotkb": "pcsk1nl; uo:ion003; wu:fj32g06", "gene_names_refseq": "pcsk1nl; uo:ion003; wu:fj32g06", "protein_names_uniprotkb": "Proprotein convertase subtilisin/kexin type 1 inhibitor, like precursor", "protein_names_refseq": "proSAAS; proprotein convertase subtilisin/kexin type 1 inhibitor, like precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:570305)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "18948394;19166982;26469318;27050163;27189481;27705817;28252024;31017557", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01029734.1, SRR32588723.853656.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On May 21, 2010 this sequence version replaced XP_698867.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Both zebrafish and Xenopus proSAAS exhibited neural and endocrine distributions., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSU7", "ec_number_list": "", "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1QCH5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QCN0-1", "uniprot_id": "GAL3A_DANRE", "mass": 27837.0, "length": 262, "protein_name": "Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial", "gene_name": "gatd3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "gatd3; Zgc:112056; gatd3a", "gene_names_refseq": "", "protein_names_uniprotkb": "Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QCN0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QCQ2-1", "uniprot_id": "F1QCQ2_DANRE", "mass": 29027.0, "length": 256, "protein_name": "Transmembrane protein 106B", "gene_name": "tmem106ba", "organism": "Zebrafish", "refseq_name": "transmembrane protein 106Ba", "refseq_ac": "NP_956656", "gene_names_uniprotkb": "tmem106ba; zgc:64013", "gene_names_refseq": "tmem106ba; zgc:64013", "protein_names_uniprotkb": "Transmembrane protein 106B", "protein_names_refseq": "transmembrane protein 106Ba", "tax_id": 7955, "disease": "hypomyelinating leukodystrophy 16 (Disease Ontology:DOID:0070405)", "pathway": " (dre:393333)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26494297;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001653.1, GFIL01040944.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On or before Jan 21, 2011 this sequence version replaced XP_001923163.1, NP_956656.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PED6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QCQ2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QCU7-1", "uniprot_id": "F1QCU7_DANRE", "mass": 71289.0, "length": 631, "protein_name": "Leucine-rich repeat-containing protein 4C", "gene_name": "lrrc4cb", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat-containing protein 4C", "refseq_ac": "XP_005166545", "gene_names_uniprotkb": "lrrc4cb", "gene_names_refseq": "lrrc4cb", "protein_names_uniprotkb": "Leucine-rich repeat-containing protein 4C", "protein_names_refseq": "leucine-rich repeat-containing protein 4C", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BDX6;A0AC58G179", "ec_number_list": "", "go_molecular_function": "GO:0098632 cell-cell adhesion mediator activity", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005886 plasma membrane;GO:0098839 postsynaptic density membrane", "go_biological_process": "GO:0050770 regulation of axonogenesis;GO:0050804 modulation of chemical synaptic transmission;GO:0099560 synaptic membrane adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QCU7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QD18-1", "uniprot_id": "F1QD18_DANRE", "mass": 221935.0, "length": 1995, "protein_name": "CASP8-associated protein 2", "gene_name": "casp8ap2", "organism": "Zebrafish", "refseq_name": "CASP8-associated protein 2", "refseq_ac": "NP_001014356", "gene_names_uniprotkb": "casp8ap2; FLASH; fc74h10; wu:fc74h10; zgc:113449", "gene_names_refseq": "FLASH; casp8ap2; fc74h10; wu:fc74h10; zgc:113449", "protein_names_uniprotkb": "CASP8-associated protein 2; FLICE-associated huge protein", "protein_names_refseq": "CASP8 associated protein 2; CASP8-associated protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:541521); (R-DRE-3899300)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "10917738;12045154;20339547;26469318;26561303;26992035;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01003091.1, GDQH01010222.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476744 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On Jan 21, 2011 this sequence version replaced NP_001014356.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Participates in TNF-induced blockade of glucocorticoid receptor (GR) transactivation at the nuclear receptor coactivator level, upstream and independently of NF-kappa-B. Suppresses both NCOA2- and NCOA3-induced enhancement of GR transactivation. Involved in TNF-induced activation of NF-kappa-B via a TRAF2-dependent pathway. Acts as a downstream mediator for CASP8-induced activation of NF-kappa-B. Required for the activation of CASP8 in FAS-mediated apoptosis. Involved for histone gene transcription and progression through S phase: required for the generation of mature histone mRNAs following the 3' end cleavage of histone pre-mRNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N4R8;F1QB51", "ec_number_list": "", "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0016605 PML body", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0008625 extrinsic apoptotic signaling pathway via death domain receptors;GO:0036337 Fas signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1QD18-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QD30-1", "uniprot_id": "F1QD30_DANRE", "mass": 46758.0, "length": 428, "protein_name": "Endothelial transcription factor GATA-2b", "gene_name": "gata2b", "organism": "Zebrafish", "refseq_name": "endothelial transcription factor GATA-2b", "refseq_ac": "NP_001002689", "gene_names_uniprotkb": "gata2b; zgc:91840", "gene_names_refseq": "gata2b; zgc:91840", "protein_names_uniprotkb": "Endothelial transcription factor GATA-2b", "protein_names_refseq": "endothelial transcription factor GATA-2b", "tax_id": 7955, "disease": "myelodysplastic syndrome (Disease Ontology:DOID:0050908); immunodeficiency 21 (Disease Ontology:DOID:0111947); pre-eclampsia (Disease Ontology:DOID:10591); aplastic anemia (Disease Ontology:DOID:12449); depressive disorder (Disease Ontology:DOID:1596); clear cell renal cell carcinoma (Disease Ontology:DOID:4467); myeloid leukemia (Disease Ontology:DOID:8692); acute myeloid leukemia (Disease Ontology:DOID:9119)", "pathway": " (dre:436962)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "19695090;25758220;26257178;26804912;26905203;37009226;37353106;37437546;38887897;39242546", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076462.1, SRR32588733.2880977.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898404, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Jun 26, 2024 this sequence version replaced NP_001002689.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Gata2b expression initiates during the convergence of posterior lateral plate mesoderm, becoming restricted to emerging hematopoietic stem cells., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ATI9", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0060218 hematopoietic stem cell differentiation;GO:0030856 regulation of epithelial cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QD30-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QD96-1", "uniprot_id": "F1QD96_DANRE", "mass": 38994.0, "length": 348, "protein_name": "Protein phosphatase 1L", "gene_name": "ppm1lb", "organism": "Zebrafish", "refseq_name": "protein phosphatase, Mg2+/Mn2+ dependent, 1Lb", "refseq_ac": "NP_001307112", "gene_names_uniprotkb": "ppm1lb; zgc:153235", "gene_names_refseq": "ppm1lb; zgc:153235", "protein_names_uniprotkb": "Protein phosphatase 1L; 3.1.3.16; Protein phosphatase 1-like; Protein phosphatase 2C isoform epsilon", "protein_names_refseq": "protein phosphatase, Mg2+/Mn2+ dependent, 1Lb", "tax_id": 7955, "disease": "", "pathway": " (dre:767640)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01031183.1, SRR32588728.10427305.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505390, SAMEA4476731 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH436392.1 and JBMGRA010000015.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Acts as a suppressor of the SAPK signaling pathways by associating with and dephosphorylating MAP3K7/TAK1 and MAP3K5, and by attenuating the association between MAP3K7/TAK1 and MAP2K4 or MAP2K6., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P7L5", "ec_number_list": "3.1.3.16;3.1.3.48;3.1.3.67;3.1.3.27", "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QD96-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QDF6-1", "uniprot_id": "F1QDF6_DANRE", "mass": 71589.0, "length": 642, "protein_name": "A-kinase anchor protein 10, mitochondrial isoform X1", "gene_name": "akap10", "organism": "Zebrafish", "refseq_name": "A-kinase anchor protein 10, mitochondrial isoform X1", "refseq_ac": "XP_005165633", "gene_names_uniprotkb": "akap10", "gene_names_refseq": "akap10", "protein_names_uniprotkb": "A-kinase anchor protein 10, mitochondrial isoform X1", "protein_names_refseq": "A-kinase anchor protein 10, mitochondrial isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:566920); (R-DRE-983231)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BCV0", "ec_number_list": "", "go_molecular_function": "GO:0051018 protein kinase A binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0008104 intracellular protein localization;GO:0048821 erythrocyte development;GO:0030099 myeloid cell differentiation;GO:0030098 lymphocyte differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QDF6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QDK1-1", "uniprot_id": "F1QDK1_DANRE", "mass": 60197.0, "length": 530, "protein_name": "Vacuolar fusion protein MON1 homolog", "gene_name": "mon1a", "organism": "Zebrafish", "refseq_name": "vacuolar fusion protein MON1 homolog A", "refseq_ac": "NP_001307360", "gene_names_uniprotkb": "mon1a; zgc:162873", "gene_names_refseq": "mon1a; zgc:162873", "protein_names_uniprotkb": "Vacuolar fusion protein MON1 homolog", "protein_names_refseq": "MON1 homolog A; vacuolar fusion protein MON1 homolog A", "tax_id": 7955, "disease": "congenital diarrhea (Disease Ontology:DOID:0060774)", "pathway": " (dre:100073333); (R-DRE-8876198)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;31349972", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC141796.1, GFIL01026629.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476738 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Jul 28, 2025 this sequence version replaced NP_001307360.1. Sequence Note:., [RefSeq]; Plays an important role in membrane trafficking through the secretory apparatus., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P7N8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0035658 Mon1-Ccz1 complex", "go_biological_process": "GO:0016192 vesicle-mediated transport;GO:0009306 protein secretion;GO:0006623 protein targeting to vacuole", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QDK1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QDL2-1", "uniprot_id": "F1QDL2_DANRE", "mass": 29988.0, "length": 260, "protein_name": "Ribosome biogenesis protein NSA2 homolog", "gene_name": "nsa2", "organism": "Zebrafish", "refseq_name": "ribosome biogenesis protein NSA2 homolog", "refseq_ac": "NP_955862", "gene_names_uniprotkb": "nsa2; fb34b10; wu:fb34b10; zgc:56334", "gene_names_refseq": "fb34b10; nsa2; wu:fb34b10; zgc:56334", "protein_names_uniprotkb": "Ribosome biogenesis protein NSA2 homolog", "protein_names_refseq": "ribosome biogenesis protein NSA2 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:321769)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01000017.1, BC046083.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1, EH457038.1 and EH531450.1. On Jan 7, 2011 this sequence version replaced NP_955862.1., [RefSeq]; Involved in the biogenesis of the 60S ribosomal subunit. May play a part in the quality control of pre-60S particles., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PE36", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus;GO:0030687 preribosome, large subunit precursor", "go_biological_process": "GO:0000460 maturation of 5.8S rRNA;GO:0000470 maturation of LSU-rRNA", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QDL2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QDN6-1", "uniprot_id": "F1QDN6_DANRE", "mass": 41794.0, "length": 365, "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon; 2.3.1.51", "gene_name": "agpat5", "organism": "Zebrafish", "refseq_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon", "refseq_ac": "NP_001070213", "gene_names_uniprotkb": "agpat5; fc35d05; wu:fc35d05; zgc:154071", "gene_names_refseq": "agpat5; fc35d05; wu:fc35d05; zgc:154071", "protein_names_uniprotkb": "1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon; 2.3.1.51", "protein_names_refseq": "1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon", "tax_id": 7955, "disease": "", "pathway": " (dre:767778); (R-DRE-1483166)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01000676.1, SRR32588732.22740279.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1 and CB359574.1. On Nov 14, 2012 this sequence version replaced NP_001070213.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAW1", "ec_number_list": "2.3.1.51;2.3.1.23;2.3.1.67;2.3.1.25;2.3.1.15;2.3.1.-", "go_molecular_function": "GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity;GO:0016746 acyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0012505 endomembrane system", "go_biological_process": "GO:0008654 phospholipid biosynthetic process;GO:0036149 phosphatidylinositol acyl-chain remodeling", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QDN6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QDT3-1", "uniprot_id": "F1QDT3_DANRE", "mass": 52677.0, "length": 476, "protein_name": "Notchless protein homolog 1", "gene_name": "nle1", "organism": "Zebrafish", "refseq_name": "notchless protein homolog 1", "refseq_ac": "NP_001315445", "gene_names_uniprotkb": "nle1; fc12b09; fc45f01; wu:fc12b09; wu:fc45f01; zgc:110281", "gene_names_refseq": "fc12b09; fc45f01; nle1; wu:fc12b09; wu:fc45f01; zgc:110281", "protein_names_uniprotkb": "Notchless protein homolog 1", "protein_names_refseq": "notchless protein homolog 1", "tax_id": 7955, "disease": "", "pathway": " (dre:553606)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "24198278;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154356.1, SRR32588721.2372952.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505376, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jun 16, 2016 this sequence version replaced XP_005155319.1. Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PA49", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0007219 Notch signaling pathway;GO:0008593 regulation of Notch signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QDT3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QDT4-1", "uniprot_id": "F1QDT4_DANRE", "mass": 27181.0, "length": 248, "protein_name": "2.7.4.3; Transcription initiation factor TFIID subunit 9", "gene_name": "taf9", "organism": "Zebrafish", "refseq_name": "transcription initiation factor TFIID subunit 9", "refseq_ac": "NP_001037860", "gene_names_uniprotkb": "taf9; TAF2G; im:7089279; wu:fb16h03; zgc:153410", "gene_names_refseq": "TAF2G; im:7089279; taf9; wu:fb16h03; zgc:153410", "protein_names_uniprotkb": "2.7.4.3; Transcription initiation factor TFIID subunit 9", "protein_names_refseq": "transcription initiation factor TFIID subunit 9", "tax_id": 7955, "disease": "", "pathway": " (dre:321485); (R-DRE-5689880); (R-DRE-674695); (R-DRE-6804756); (R-DRE-6807505); (R-DRE-73776); (R-DRE-73779); (R-DRE-75953); (R-DRE-76042)", "pathway_count": 9, "publication_count": 4, "publication_id_list": "11116086;16109975;26469318;27189481", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N969", "ec_number_list": "2.7.7.6;2.3.1.48;2.3.1.-;3.4.19.12;3.1.3.16;2.7.4.3;3.1.27.-;2.7.11.22;2.7.11.23;5.6.2.4", "go_molecular_function": "GO:0004017 AMP kinase activity;GO:0003713 transcription coactivator activity;GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0005669 transcription factor TFIID complex;GO:0000124 SAGA complex", "go_biological_process": "GO:0051123 RNA polymerase II preinitiation complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QDT4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QE14-1", "uniprot_id": "F1QE14_DANRE", "mass": 96669.0, "length": 854, "protein_name": "SLIT and NTRK-like protein 2", "gene_name": "slitrk2", "organism": "Zebrafish", "refseq_name": "SLIT and NTRK-like protein 2", "refseq_ac": "XP_001332767", "gene_names_uniprotkb": "slitrk2", "gene_names_refseq": "slitrk2", "protein_names_uniprotkb": "SLIT and NTRK-like protein 2", "protein_names_refseq": "SLIT and NTRK-like protein 2", "tax_id": 7955, "disease": "non-syndromic X-linked intellectual developmental disorder 111 (Disease Ontology:DOID:0060929)", "pathway": " (dre:794165)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_001332767.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PU57", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0016020 membrane", "go_biological_process": "GO:0021782 glial cell development;GO:0007409 axonogenesis;GO:0060041 retina development in camera-type eye;GO:0051965 positive regulation of synapse assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QE14-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QE25-1", "uniprot_id": "F1QE25_DANRE", "mass": 100945.0, "length": 867, "protein_name": "N-alpha-acetyltransferase 15, NatA auxiliary subunit a", "gene_name": "naa15a", "organism": "Zebrafish", "refseq_name": "N-alpha-acetyltransferase 15, NatA auxiliary subunit a", "refseq_ac": "NP_956940", "gene_names_uniprotkb": "naa15a; narg1a; wu:fc06f11; wu:fc23c05; zgc:66136", "gene_names_refseq": "naa15a; narg1a; wu:fc06f11; wu:fc23c05; zgc:66136", "protein_names_uniprotkb": "N-alpha-acetyltransferase 15, NatA auxiliary subunit a", "protein_names_refseq": "N-alpha-acetyltransferase 15, NatA auxiliary subunit a; NMDA receptor-regulated gene 1a", "tax_id": 7955, "disease": "developmental disorder of mental health (Disease Ontology:DOID:0060037); autism spectrum disorder (Disease Ontology:DOID:0060041); autosomal dominant intellectual developmental disorder 50 (Disease Ontology:DOID:0080233); intellectual disability (Disease Ontology:DOID:1059); congenital heart disease (Disease Ontology:DOID:1682)", "pathway": " (dre:323672)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "16109975;26469318;27189481;30061596;30502388;30755680;38203224", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC057466.1, GDQQ01016337.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Oct 9, 2016 this sequence version replaced NP_956940.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PD68", "ec_number_list": "", "go_molecular_function": "GO:0010698 acetyltransferase activator activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0031415 NatA complex", "go_biological_process": "GO:0061055 myotome development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1QE25-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QE47-1", "uniprot_id": "F1QE47_DANRE", "mass": 17439.0, "length": 156, "protein_name": "Dual specificity phosphatase 28", "gene_name": "dusp28", "organism": "Zebrafish", "refseq_name": "dual specificity phosphatase 28", "refseq_ac": "XP_001344320", "gene_names_uniprotkb": "dusp28", "gene_names_refseq": "dusp28", "protein_names_uniprotkb": "Dual specificity phosphatase 28", "protein_names_refseq": "dual specificity phosphatase 28", "tax_id": 7955, "disease": "chromosome 17q12 deletion syndrome (Disease Ontology:DOID:0060404)", "pathway": " (dre:100005205)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_001344320.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BA99;X1WFS4", "ec_number_list": "3.1.3.16;3.1.3.48;3.1.3.67;3.1.3.27", "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QE47-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QE49-1", "uniprot_id": "F1QE49_DANRE", "mass": 61705.0, "length": 557, "protein_name": "F-box only protein 43", "gene_name": "fbxo43", "organism": "Zebrafish", "refseq_name": "F-box only protein 43", "refseq_ac": "NP_956725", "gene_names_uniprotkb": "fbxo43; zgc:66488", "gene_names_refseq": "fbxo43; zgc:66488", "protein_names_uniprotkb": "F-box only protein 43", "protein_names_refseq": "F-box only protein 43", "tax_id": 7955, "disease": "spermatogenic failure 64 (Disease Ontology:DOID:0112353)", "pathway": " (dre:393403)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "21552289;29944347", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395014.965229.1, SRR26395050.365287.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898399, SAMEA898400 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On May 31, 2017 this sequence version replaced NP_956725.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PMA8;A0AC58HFR4", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0007088 regulation of mitotic nuclear division;GO:0051321 meiotic cell cycle;GO:0045835 negative regulation of meiotic nuclear division", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QE49-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QE55-1", "uniprot_id": "F1QE55_DANRE", "mass": 30602.0, "length": 289, "protein_name": "Uncharacterized protein LOC767799", "gene_name": "fb34h03; wu:fb34h03", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC767799", "refseq_ac": "NP_001070234", "gene_names_uniprotkb": "fb34h03; wu:fb34h03; fb34h03; si:ch211-101n13.1; si:zc101n13.1; wu:fb34h03; zgc:153169", "gene_names_refseq": "fb34h03; si:ch211-101n13.1; si:zc101n13.1; wu:fb34h03; zgc:153169", "protein_names_uniprotkb": "Uncharacterized protein LOC767799", "protein_names_refseq": "asparaginase; uncharacterized protein LOC767799", "tax_id": 7955, "disease": "", "pathway": " (dre:767799)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124267.1, GFIL01045169.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA3505391 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On Dec 5, 2025 this sequence version replaced NP_001070234.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NBC1", "ec_number_list": "", "go_molecular_function": "GO:0003948 N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QE55-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QE68-1", "uniprot_id": "F1QE68_DANRE", "mass": 48322.0, "length": 416, "protein_name": "Sulfotransferase", "gene_name": "chst7", "organism": "Zebrafish", "refseq_name": "carbohydrate sulfotransferase 7", "refseq_ac": "XP_005166054", "gene_names_uniprotkb": "chst7", "gene_names_refseq": "chst7", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "carbohydrate sulfotransferase 7", "tax_id": 7955, "disease": "", "pathway": " (dre:563748); (R-DRE-2022870)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BDD0;X1WHI3", "ec_number_list": "2.8.2.-", "go_molecular_function": "GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity;GO:0008459 chondroitin 6-sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0006044 N-acetylglucosamine metabolic process;GO:0005975 carbohydrate metabolic process;GO:0006790 sulfur compound metabolic process;GO:0050650 chondroitin sulfate proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QE68-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QEI3-1", "uniprot_id": "F1QEI3_DANRE", "mass": 41695.0, "length": 372, "protein_name": "Cell cycle control protein", "gene_name": "tmem30aa", "organism": "Zebrafish", "refseq_name": "transmembrane protein 30Aa", "refseq_ac": "NP_997941", "gene_names_uniprotkb": "tmem30aa; tmem30a; wu:fj66b08; zgc:91877", "gene_names_refseq": "cdc50aa; tmem30aa; tmem30a; wu:fj66b08; zgc:91877", "protein_names_uniprotkb": "Cell cycle control protein", "protein_names_refseq": "transmembrane protein 30Aa; transmembrane protein 30A", "tax_id": 7955, "disease": "", "pathway": " (dre:337397); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "15520368;16109975;26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY391412.1, BC074040.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH584307.1, BC074040.1 and JBMGRA010000017.1. On Sep 8, 2016 this sequence version replaced NP_997941.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFN3", "ec_number_list": "", "go_molecular_function": "GO:0015247 aminophospholipid flippase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016324 apical plasma membrane;GO:0030658 transport vesicle membrane", "go_biological_process": "GO:0045332 phospholipid translocation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QEI3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QEJ5-1", "uniprot_id": "F1QEJ5_DANRE", "mass": 9547.0, "length": 82, "protein_name": "Cytochrome b-c1 complex subunit 8", "gene_name": "uqcrq", "organism": "Zebrafish", "refseq_name": "cytochrome b-c1 complex subunit 8", "refseq_ac": "NP_001002495", "gene_names_uniprotkb": "uqcrq; mg:bb03b10; zgc:92848", "gene_names_refseq": "mg:bb03b10; uqcrq; zgc:92848", "protein_names_uniprotkb": "Cytochrome b-c1 complex subunit 8; Complex III subunit 8", "protein_names_refseq": "cytochrome b-c1 complex subunit 8", "tax_id": 7955, "disease": "mitochondrial complex III deficiency nuclear type 4 (Disease Ontology:DOID:0080113)", "pathway": " (dre:436768); (R-DRE-611105); (R-DRE-9837999); (R-DRE-9865881)", "pathway_count": 4, "publication_count": 6, "publication_id_list": "16109975;27189481;28252024;31787979;33548715;35893052", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH581029.1, EH543878.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476741, SAMEA4476745 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1 and EH545017.1. On Nov 18, 2009 this sequence version replaced NP_001002495.1., [RefSeq]; Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The complex plays an important role in the uptake of multiple carbon sources present in different host niches., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0M1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0045275 respiratory chain complex III", "go_biological_process": "GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QEJ5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QEL0-1", "uniprot_id": "F1QEL0_DANRE", "mass": 76097.0, "length": 672, "protein_name": "Transmembrane protein 214", "gene_name": "tmem214", "organism": "Zebrafish", "refseq_name": "transmembrane protein 214", "refseq_ac": "NP_001243105", "gene_names_uniprotkb": "tmem214", "gene_names_refseq": "tmem214", "protein_names_uniprotkb": "Transmembrane protein 214", "protein_names_refseq": "transmembrane protein 214", "tax_id": 7955, "disease": "", "pathway": " (dre:402840)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;28252024;31299224", "class_list": "", "function": "Critical mediator, in cooperation with CASP4, of endoplasmic reticulum-stress induced apoptosis. Required or the activation of CASP4 following endoplasmic reticulum stress., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NYY5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QEL0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QEL5-1", "uniprot_id": "F1QEL5_DANRE", "mass": 187856.0, "length": 1673, "protein_name": "Cholesterol transporter ABCA5", "gene_name": "abca5", "organism": "Zebrafish", "refseq_name": "cholesterol transporter ABCA5", "refseq_ac": "NP_001092716", "gene_names_uniprotkb": "abca5; zgc:163009", "gene_names_refseq": "abca5; zgc:163009", "protein_names_uniprotkb": "Cholesterol transporter ABCA5; ATP-binding cassette sub-family A member 5", "protein_names_refseq": "cholesterol transporter ABCA5", "tax_id": 7955, "disease": "", "pathway": " (dre:100151075); (R-DRE-1369062); (R-DRE-382556)", "pathway_count": 3, "publication_count": 9, "publication_id_list": "16124856;16631343;24637248;24683187;26047617;26469318;28252024;28694436;31136897", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01000039.1, GDQH01004462.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476746, SAMEA4476748 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On or before Jun 14, 2024 this sequence version replaced XP_005156458.1, NP_001092716.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Cholesterol efflux transporter in macrophages that is responsible for APOAI/high-density lipoproteins (HDL) formation at the plasma membrane under high cholesterol levels and participates in reverse cholesterol transport. May play a role in the processing of autolysosomes., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B357", "ec_number_list": "", "go_molecular_function": "GO:0005319 lipid transporter activity;GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0016887 ATP hydrolysis activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005886 plasma membrane;GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane", "go_biological_process": "GO:0006869 lipid transport;GO:0043691 reverse cholesterol transport;GO:0010874 regulation of cholesterol efflux", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F1QEL5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QEV7-1", "uniprot_id": "F1QEV7_DANRE", "mass": 48025.0, "length": 431, "protein_name": "Kunitz-type protease inhibitor 2 precursor", "gene_name": "spint2", "organism": "Zebrafish", "refseq_name": "kunitz-type protease inhibitor 2 precursor", "refseq_ac": "NP_001070718", "gene_names_uniprotkb": "spint2; fb52h04; fe24a06; wu:fb52h04; wu:fe24a06; zgc:153795", "gene_names_refseq": "fb52h04; fe24a06; spint2; wu:fb52h04; wu:fe24a06; zgc:153795", "protein_names_uniprotkb": "Kunitz-type protease inhibitor 2 precursor", "protein_names_refseq": "kunitz-type protease inhibitor 2 precursor", "tax_id": 7955, "disease": "congenital secretory sodium diarrhea 3 (Disease Ontology:DOID:0060781); biliary atresia (Disease Ontology:DOID:13608)", "pathway": " (dre:562009)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "26469318;29042681;30061596;32784920;33826923", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115335.1, BC124739.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB963426.1, EH457273.1, EB952759.1 and EH459553.1. On Mar 8, 2013 this sequence version replaced NP_001070718.1., [RefSeq]; The Kunitz-type serine protease inhibitor Spint2 is required for cellular cohesion, coordinated cell migration and cell survival during zebrafish hatching gland development., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA44", "ec_number_list": "", "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QEV7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QEY8-1", "uniprot_id": "F1QEY8_DANRE", "mass": 55612.0, "length": 528, "protein_name": "D-3-phosphoglycerate dehydrogenase", "gene_name": "phgdh", "organism": "Zebrafish", "refseq_name": "D-3-phosphoglycerate dehydrogenase", "refseq_ac": "NP_955871", "gene_names_uniprotkb": "phgdh; fb38f06; wu:fb38f06; zgc:65956", "gene_names_refseq": "fb38f06; phgdh; wu:fb38f06; zgc:65956", "protein_names_uniprotkb": "D-3-phosphoglycerate dehydrogenase; 1.1.1.95", "protein_names_refseq": "D-3-phosphoglycerate dehydrogenase", "tax_id": 7955, "disease": "PHGDH deficiency (Disease Ontology:DOID:0050722); Neu-Laxova syndrome 1 (Disease Ontology:DOID:0080076); amino acid metabolic disorder (Disease Ontology:DOID:9252)", "pathway": " (dre:321928); (R-DRE-977347)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "17703193;23874447;25714999;26235539;26469318;28252024;28329862;32316833;33792664;37024546", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01030205.1, GDQQ01020334.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH592171.1, EH435992.1, JBMGRA010000009.1, EH609675.1, EH460654.1 and EH600120.1. On Aug 20, 2015 this sequence version replaced NP_955871.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFH7", "ec_number_list": "1.1.1.95", "go_molecular_function": "GO:0051287 NAD binding;GO:0004617 phosphoglycerate dehydrogenase activity", "go_cellular_component": "", "go_biological_process": "GO:0006564 L-serine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QEY8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QF11-1", "uniprot_id": "F1QF11_DANRE", "mass": 155025.0, "length": 1400, "protein_name": "Ankyrin and armadillo repeat-containing protein", "gene_name": "ankar", "organism": "Zebrafish", "refseq_name": "ankyrin and armadillo repeat-containing protein", "refseq_ac": "NP_001035135", "gene_names_uniprotkb": "ankar; si:busm1-211o13.9; si:busm1-72b14.8; si:dz211o13.9; si:dz72b14.8; zgc:136667", "gene_names_refseq": "ankar; si:busm1-211o13.9; si:busm1-72b14.8; si:dz211o13.9; si:dz72b14.8; zgc:136667", "protein_names_uniprotkb": "Ankyrin and armadillo repeat-containing protein", "protein_names_refseq": "ankyrin and armadillo repeat-containing protein", "tax_id": 7955, "disease": "", "pathway": " (dre:368636)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12618376;28256502", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588733.2265088.1, SRR32588724.2355367.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1 and BC114243.1. On Nov 19, 2009 this sequence version replaced NP_001035135.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N8U9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QF11-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QF19-1", "uniprot_id": "F1QF19_DANRE", "mass": 96967.0, "length": 854, "protein_name": "2.3.2.26; E3 ubiquitin-protein ligase HECTD3", "gene_name": "hectd3", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase HECTD3", "refseq_ac": "NP_001070627", "gene_names_uniprotkb": "hectd3; wu:fc38h02; zgc:153380", "gene_names_refseq": "hectd3; wu:fc38h02; zgc:153380", "protein_names_uniprotkb": "2.3.2.26; E3 ubiquitin-protein ligase HECTD3", "protein_names_refseq": "E3 ubiquitin-protein ligase HECTD3", "tax_id": 7955, "disease": "", "pathway": " (dre:563189); (R-DRE-983168)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAZ3", "ec_number_list": "2.3.2.-;2.3.2.27;3.6.4.-;2.3.2.34;2.3.2.26;6.2.1.45;2.3.2.31;2.3.2.23;3.4.19.12;2.3.2.25", "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QF19-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QF39-1", "uniprot_id": "F1QF39_DANRE", "mass": 40124.0, "length": 350, "protein_name": "Galanin receptor type 1", "gene_name": "galr1b", "organism": "Zebrafish", "refseq_name": "galanin receptor type 1b", "refseq_ac": "NP_001314772", "gene_names_uniprotkb": "galr1b", "gene_names_refseq": "galr1b", "protein_names_uniprotkb": "Galanin receptor type 1", "protein_names_refseq": "galanin receptor type 1b", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742); opioid abuse (Disease Ontology:DOID:11206); opiate dependence (Disease Ontology:DOID:2559)", "pathway": " (dre:561989); (R-DRE-375276); (R-DRE-416476); (R-DRE-418594)", "pathway_count": 4, "publication_count": 5, "publication_id_list": "20476798;23268327;24517231;31902721;35219430", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01027933.1, GFIL01023507.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505379, SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On May 27, 2016 this sequence version replaced XP_009301621.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Receptor for the hormone galanin. The activity of this receptor is mediated by G proteins that inhibit adenylate cyclase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9F0", "ec_number_list": "", "go_molecular_function": "GO:0004966 galanin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007218 neuropeptide signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QF39-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QF60-1", "uniprot_id": "F1QF60_DANRE", "mass": 108674.0, "length": 957, "protein_name": "Chromosome transmission fidelity protein 18 homolog", "gene_name": "chtf18", "organism": "Zebrafish", "refseq_name": "chromosome transmission fidelity protein 18 homolog", "refseq_ac": "NP_001103572", "gene_names_uniprotkb": "chtf18; zgc:113153", "gene_names_refseq": "chtf18; zgc:113153", "protein_names_uniprotkb": "Chromosome transmission fidelity protein 18 homolog", "protein_names_refseq": "chromosome transmission fidelity protein 18 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:554366); (R-DRE-174411)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "24198278;24989799;25503746", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395039.1098897.1, SRR26395013.628097.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476742 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 25, 2025 this sequence version replaced NP_001103572.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NEK2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006260 DNA replication;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QF60-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QF74-1", "uniprot_id": "F1QF74_DANRE", "mass": 138288.0, "length": 1242, "protein_name": "C-Jun-amino-terminal kinase-interacting protein 2", "gene_name": "mapk8ip2", "organism": "Zebrafish", "refseq_name": "C-Jun-amino-terminal kinase-interacting protein 2", "refseq_ac": "XP_685086", "gene_names_uniprotkb": "mapk8ip2", "gene_names_refseq": "mapk8ip2", "protein_names_uniprotkb": "C-Jun-amino-terminal kinase-interacting protein 2", "protein_names_refseq": "C-Jun-amino-terminal kinase-interacting protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:561262)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_685086.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T741", "ec_number_list": "", "go_molecular_function": "GO:0005078 MAP-kinase scaffold activity;GO:0016301 kinase activity;GO:0008432 JUN kinase binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007254 JNK cascade;GO:0046328 regulation of JNK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QF74-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QF80-1", "uniprot_id": "F1QF80_DANRE", "mass": 80974.0, "length": 699, "protein_name": "2.7.4.3; Adenylate kinase 7", "gene_name": "ak7b", "organism": "Zebrafish", "refseq_name": "adenylate kinase 7", "refseq_ac": "NP_001103168", "gene_names_uniprotkb": "ak7b; im:7150989; zgc:165635", "gene_names_refseq": "ak7b; im:7150989; zgc:165635", "protein_names_uniprotkb": "2.7.4.3; Adenylate kinase 7", "protein_names_refseq": "adenylate kinase 7", "tax_id": 7955, "disease": "spermatogenic failure 27 (Disease Ontology:DOID:0111928); hydrocephalus (Disease Ontology:DOID:10908)", "pathway": " (dre:504040); (R-DRE-499943)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;36513626", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01000768.1, GDQH01017129.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On or before Feb 13, 2016 this sequence version replaced XP_005158729.1, NP_001103168.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NEC6", "ec_number_list": "2.7.4.3;2.7.4.6", "go_molecular_function": "GO:0004017 AMP kinase activity;GO:0005524 ATP binding;GO:0004550 nucleoside diphosphate kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QF80-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QF84-1", "uniprot_id": "F1QF84_DANRE", "mass": 98164.0, "length": 872, "protein_name": "dolichyl-phosphate-mannose--protein mannosyltransferase", "gene_name": "tmtc1", "organism": "Zebrafish", "refseq_name": "protein O-mannosyl-transferase TMTC1", "refseq_ac": "XP_001922025", "gene_names_uniprotkb": "tmtc1", "gene_names_refseq": "tmtc1", "protein_names_uniprotkb": "dolichyl-phosphate-mannose--protein mannosyltransferase; 2.4.1.109", "protein_names_refseq": "protein O-mannosyl-transferase TMTC1", "tax_id": 7955, "disease": "", "pathway": " (dre:555449)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001922025.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QHN3", "ec_number_list": "", "go_molecular_function": "GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity;GO:0000030 mannosyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0035269 protein O-linked glycosylation via mannose", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QF84-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QF98-1", "uniprot_id": "F1QF98_DANRE", "mass": 104566.0, "length": 927, "protein_name": "Probable RNA-binding protein 19", "gene_name": "rbm19", "organism": "Zebrafish", "refseq_name": "probable RNA-binding protein 19", "refseq_ac": "NP_944597", "gene_names_uniprotkb": "rbm19; npo", "gene_names_refseq": "npo; rbm19", "protein_names_uniprotkb": "Probable RNA-binding protein 19; RNA-binding motif protein 19", "protein_names_refseq": "nil per os; probable RNA-binding protein 19", "tax_id": 7955, "disease": "", "pathway": " (dre:387255)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "12874115;15256591;23897685", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01032310.1, AY648773.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH537904.1, JBMGRA010000006.1, EB920391.1 and EB927881.1. On or before Aug 21, 2015 this sequence version replaced XP_009300925.1, NP_944597.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Plays a role in embryo pre-implantation development., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YZI8", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0016607 nuclear speck;GO:0005694 chromosome", "go_biological_process": "GO:0048546 digestive tract morphogenesis;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QF98-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFB6-1", "uniprot_id": "F1QFB6_DANRE", "mass": 29894.0, "length": 257, "protein_name": "Transcription factor PU.1a", "gene_name": "spi1a", "organism": "Zebrafish", "refseq_name": "transcription factor PU.1a", "refseq_ac": "NP_001417886", "gene_names_uniprotkb": "spi1a; spi1l; zgc:152991", "gene_names_refseq": "spi1a; spi1l; zgc:152991", "protein_names_uniprotkb": "Transcription factor PU.1a", "protein_names_refseq": "spleen focus forming virus (SFFV) proviral integration oncogene spi1 like; spleen focus forming virus (SFFV) proviral integration oncogene spi1a; transcription factor PU.1a; transcription factor pu.2", "tax_id": 7955, "disease": "agammaglobulinemia 10 (Disease Ontology:DOID:0081142); acute myeloid leukemia (Disease Ontology:DOID:9119)", "pathway": " (dre:751704)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "19131555;25395663;26469318;26804912;27189481;36122226;36178053;37752184;38805544;39196933", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EU685253.1, SRR32588716.11768400.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Jun 15, 2024 this sequence version replaced XP_005163238.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; A critical role for spi-1l in zebrafish myeloid cell differentiation., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BA86", "ec_number_list": "", "go_molecular_function": "GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0002761 regulation of myeloid leukocyte differentiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QFB6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFB7-1", "uniprot_id": "F1QFB7_DANRE", "mass": 54763.0, "length": 491, "protein_name": "Zinc finger and BTB domain-containing protein 22", "gene_name": "zbtb22a", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 22", "refseq_ac": "XP_009292191", "gene_names_uniprotkb": "zbtb22a", "gene_names_refseq": "zbtb22a", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 22", "protein_names_refseq": "zinc finger and BTB domain-containing protein 22", "tax_id": 7955, "disease": "", "pathway": " (dre:566513)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_009292191.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AV79", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QFB7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFC4-1", "uniprot_id": "F1QFC4_DANRE", "mass": 86552.0, "length": 752, "protein_name": "Nucleolar complex protein 2 homolog", "gene_name": "noc2l", "organism": "Zebrafish", "refseq_name": "nucleolar complex protein 2 homolog", "refseq_ac": "NP_001003830", "gene_names_uniprotkb": "noc2l; id:ibd5110; zgc:195326", "gene_names_refseq": "id:ibd5110; noc2l; zgc:195326", "protein_names_uniprotkb": "Nucleolar complex protein 2 homolog", "protein_names_refseq": "nucleolar complex associated 2 homolog; nucleolar complex protein 2 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:58013); (R-DRE-6804756)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "11731487;15256591;24045113;26961822;31680844", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY648837.1, GFIL01028391.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1, EB924499.1 and CK029021.1. On Aug 18, 2015 this sequence version replaced NP_001003830.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N1T6", "ec_number_list": "", "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0042393 histone binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0030690 Noc1p-Noc2p complex;GO:0030691 Noc2p-Noc3p complex;GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0042273 ribosomal large subunit biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QFC4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFG9-1", "uniprot_id": "F1QFG9_DANRE", "mass": 33346.0, "length": 307, "protein_name": "Syntenin-1", "gene_name": "sdcbp", "organism": "Zebrafish", "refseq_name": "syntenin-1", "refseq_ac": "NP_999963", "gene_names_uniprotkb": "sdcbp; sb:eu862; si:dkey-235k4.1", "gene_names_refseq": "sb:eu862; sdcbp; si:dkey-235k4.1", "protein_names_uniprotkb": "Syntenin-1", "protein_names_refseq": "syntenin-1; syntenin-b", "tax_id": 7955, "disease": "", "pathway": " (dre:407719); (R-DRE-3928664); (R-DRE-6798695)", "pathway_count": 3, "publication_count": 7, "publication_id_list": "22399807;25114259;26469318;27156808;27189481;28252024;30383201", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY577004.1, GFIL01037199.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505379, SAMEA3505391 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Jun 18, 2015 this sequence version replaced NP_999963.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Data show that epiboly relies on the molecular networking of protein arginine methyltransferase 7 (Prmt7) by facilitating syntenin, which acts as a regulator for cytoskeleton., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFQ7", "ec_number_list": "", "go_molecular_function": "GO:0008289 lipid binding;GO:0045545 syndecan binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1QFG9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFJ8-1", "uniprot_id": "F1QFJ8_DANRE", "mass": 44139.0, "length": 407, "protein_name": "Heterogeneous nuclear ribonucleoprotein H1, like", "gene_name": "hnrnph1l", "organism": "Zebrafish", "refseq_name": "heterogeneous nuclear ribonucleoprotein H1, like", "refseq_ac": "NP_997754", "gene_names_uniprotkb": "hnrnph1l; fb19a06; wu:fb19a06; zgc:55399; zgc:85960", "gene_names_refseq": "fb19a06; hnrnph1l; wu:fb19a06; zgc:55399; zgc:85960", "protein_names_uniprotkb": "Heterogeneous nuclear ribonucleoprotein H1, like", "protein_names_refseq": "heterogeneous nuclear ribonucleoprotein H1, like", "tax_id": 7955, "disease": "syndromic X-linked intellectual developmental disorder bain type (Disease Ontology:DOID:0070538); Sjogren's syndrome (Disease Ontology:DOID:12894); hepatocellular carcinoma (Disease Ontology:DOID:684); renal glycosuria (Disease Ontology:DOID:9432)", "pathway": " (dre:321556); (R-DRE-72163); (R-DRE-72203); (R-DRE-9770562)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IHE2;A0A8M1PHL5", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0043484 regulation of RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QFJ8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFK9-1", "uniprot_id": "F1QFK9_DANRE", "mass": 48246.0, "length": 431, "protein_name": "Cleavage stimulation factor subunit 1", "gene_name": "cstf1", "organism": "Zebrafish", "refseq_name": "cleavage stimulation factor subunit 1", "refseq_ac": "NP_001315488", "gene_names_uniprotkb": "cstf1; fc22d10; wu:fc22d10; wu:fd16h09; zgc:66207; zgc:77560", "gene_names_refseq": "cstf1; fc22d10; wu:fc22d10; wu:fd16h09; zgc:66207; zgc:77560", "protein_names_uniprotkb": "Cleavage stimulation factor subunit 1; Cleavage stimulation factor 50 kDa subunit", "protein_names_refseq": "cleavage stimulation factor subunit 1", "tax_id": 7955, "disease": "", "pathway": " (dre:324238); (R-DRE-73856); (R-DRE-77595); (R-DRE-9770562)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395015.66678.1, SRR26395013.980675.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505376, SAMEA3505382 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Jun 25, 2025 this sequence version replaced NP_001315488.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; One of the multiple factors required for polyadenylation and 3'-end cleavage of mammalian pre-mRNAs. May be responsible for the interaction of CSTF with other factors to form a stable complex on the pre-mRNA., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P431", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005848 mRNA cleavage stimulating factor complex", "go_biological_process": "GO:0031124 mRNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QFK9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFP8-1", "uniprot_id": "F1QFP8_DANRE", "mass": 31876.0, "length": 292, "protein_name": "Syntaxin-17 isoform X1", "gene_name": "stx17", "organism": "Zebrafish", "refseq_name": "syntaxin-17 isoform X1", "refseq_ac": "XP_005158110", "gene_names_uniprotkb": "stx17; zgc:101617", "gene_names_refseq": "stx17; zgc:101617", "protein_names_uniprotkb": "Syntaxin-17 isoform X1", "protein_names_refseq": "syntaxin-17 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:492808); (R-DRE-204005)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "24586560;26469318;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B4D1", "ec_number_list": "", "go_molecular_function": "GO:0000149 SNARE binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0000421 autophagosome membrane;GO:0005886 plasma membrane;GO:0012505 endomembrane system;GO:0031201 SNARE complex;GO:0016020 membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006887 exocytosis;GO:0006906 vesicle fusion;GO:0048278 vesicle docking;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QFP8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFT8-1", "uniprot_id": "F1QFT8_DANRE", "mass": 51464.0, "length": 469, "protein_name": "Mitochondrial inner membrane protein OXA1L", "gene_name": "oxa1l", "organism": "Zebrafish", "refseq_name": "mitochondrial inner membrane protein OXA1L", "refseq_ac": "NP_001098600", "gene_names_uniprotkb": "oxa1l; zgc:163091; zgc:171949", "gene_names_refseq": "oxa1l; zgc:163091; zgc:171949", "protein_names_uniprotkb": "Mitochondrial inner membrane protein OXA1L", "protein_names_refseq": "mitochondrial inner membrane protein OXA1L; oxidase (cytochrome c) assembly 1-like", "tax_id": 7955, "disease": "", "pathway": " (dre:562963); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "28252024;29213239", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFW4", "ec_number_list": "", "go_molecular_function": "GO:0032977 membrane insertase activity", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0032979 protein insertion into mitochondrial inner membrane from matrix", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QFT8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFV1-1", "uniprot_id": "F1QFV1_DANRE", "mass": 171532.0, "length": 1573, "protein_name": "Cortactin-binding protein 2", "gene_name": "cttnbp2", "organism": "Zebrafish", "refseq_name": "cortactin-binding protein 2 isoform X1", "refseq_ac": "XP_021323477", "gene_names_uniprotkb": "cttnbp2", "gene_names_refseq": "cttnbp2", "protein_names_uniprotkb": "Cortactin-binding protein 2", "protein_names_refseq": "cortactin-binding protein 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555837)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Regulates the dendritic spine distribution of CTTN/cortactin in hippocampal neurons, and thus controls dendritic spinogenesis and dendritic spine maintenance. Associates with the striatin-interacting phosphatase and kinase (STRIPAK) core complex to regulate dendritic spine distribution of the STRIPAK complex in hippocampal neurons., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9P1C3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005938 cell cortex;GO:0043197 dendritic spine", "go_biological_process": "GO:0050807 regulation of synapse organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QFV1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFY0-1", "uniprot_id": "F1QFY0_DANRE", "mass": 103395.0, "length": 917, "protein_name": "Rho GTPase-activating protein 4a isoform X1", "gene_name": "arhgap4a", "organism": "Zebrafish", "refseq_name": "rho GTPase-activating protein 4a", "refseq_ac": "NP_956738", "gene_names_uniprotkb": "arhgap4a; zgc:63672", "gene_names_refseq": "arhgap4a; zgc:63672", "protein_names_uniprotkb": "Rho GTPase-activating protein 4a isoform X1", "protein_names_refseq": "rho GTPase-activating protein 4a", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588717.44605558.1, SRR32588731.981542.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN18715719 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On or before Jul 21, 2025 this sequence version replaced XP_073794279.1, NP_956738.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IFP1;A0A8M2B900;A0AC58IJ53;A0AC58IJ59", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0007399 nervous system development;GO:0030336 negative regulation of cell migration;GO:0051963 regulation of synapse assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QFY0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QG08-1", "uniprot_id": "F1QG08_DANRE", "mass": 56919.0, "length": 479, "protein_name": "dual-specificity kinase", "gene_name": "clk4b", "organism": "Zebrafish", "refseq_name": "dual specificity protein kinase CLK4b isoform 1", "refseq_ac": "NP_001316837", "gene_names_uniprotkb": "clk4b; zgc:112975", "gene_names_refseq": "clk4b; zgc:112975", "protein_names_uniprotkb": "dual-specificity kinase; 2.7.12.1", "protein_names_refseq": "dual specificity protein kinase CLK4b isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:503607)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01004223.1, SRR32588726.34348038.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH502499.1, JBMGRA010000021.1, EH432234.1, EH458583.1 and CT646097.2. On Aug 4, 2016 this sequence version replaced XP_005161451.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAK3", "ec_number_list": "", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0004713 protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0043484 regulation of RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1QG08-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGC9-1", "uniprot_id": "F1QGC9_DANRE", "mass": 29352.0, "length": 253, "protein_name": "Coiled-coil domain-containing protein 90B, mitochondrial", "gene_name": "ccdc90b", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 90B, mitochondrial", "refseq_ac": "NP_001159730", "gene_names_uniprotkb": "ccdc90b; bZ1P14.3; si:rp71-1p14.3", "gene_names_refseq": "bZ1P14.3; ccdc90b; si:rp71-1p14.3", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 90B, mitochondrial", "protein_names_refseq": "coiled-coil domain-containing protein 90B, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:100149897)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01026420.1, GFIL01003285.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1, EH449434.1 and EH475260.1. On Dec 24, 2014 this sequence version replaced NP_001159730.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NVM8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0031966 mitochondrial membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QGC9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGD9-1", "uniprot_id": "F1QGD9_DANRE", "mass": 74514.0, "length": 672, "protein_name": "tRNA (guanine(26)-N(2))-dimethyltransferase", "gene_name": "trmt1", "organism": "Zebrafish", "refseq_name": "tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1", "refseq_ac": "XP_685886", "gene_names_uniprotkb": "trmt1", "gene_names_refseq": "trmt1", "protein_names_uniprotkb": "tRNA (guanine(26)-N(2))-dimethyltransferase; 2.1.1.216", "protein_names_refseq": "tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1", "tax_id": 7955, "disease": "autosomal recessive intellectual developmental disorder 68 (Disease Ontology:DOID:0081229)", "pathway": " (dre:553298)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_685886.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TED0", "ec_number_list": "2.1.1.216", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000049 tRNA binding;GO:0160104 tRNA (guanine(26)-N2)-dimethyltransferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0008033 tRNA processing;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QGD9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGH4-1", "uniprot_id": "F1QGH4_DANRE", "mass": 44020.0, "length": 391, "protein_name": "Cyclin-A1", "gene_name": "ccna1", "organism": "Zebrafish", "refseq_name": "cyclin-A1", "refseq_ac": "NP_997983", "gene_names_uniprotkb": "ccna1; fd14f08; wu:fd14f08; wu:fi20d12; zgc:111869", "gene_names_refseq": "ccna1; fd14f08; wu:fd14f08; wu:fi20d12; zgc:111869", "protein_names_uniprotkb": "Cyclin-A1", "protein_names_refseq": "cyclin-A1", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); acute myeloid leukemia (Disease Ontology:DOID:9119)", "pathway": " (dre:404206); (R-DRE-1538133); (R-DRE-174184); (R-DRE-176408); (R-DRE-187577); (R-DRE-2559582); (R-DRE-2559586); (R-DRE-5689880); (R-DRE-5693607); (R-DRE-6804116); (R-DRE-6804756); (R-DRE-6804757); (R-DRE-68911); (R-DRE-68949); (R-DRE-69017); (R-DRE-69273); (R-DRE-69478); (R-DRE-69563); (R-DRE-69656); (R-DRE-75035)", "pathway_count": 20, "publication_count": 10, "publication_id_list": "16109975;19092113;20047469;22899848;23499292;34829928;36627765;37009226;38252267;38605226", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC100124.1, AF268045.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708832, SAMEA898399 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1 and EH501966.1. On Aug 22, 2015 this sequence version replaced NP_997983.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFS5", "ec_number_list": "", "go_molecular_function": "GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005815 microtubule organizing center;GO:0097124 cyclin A2-CDK2 complex", "go_biological_process": "GO:0051301 cell division;GO:0000082 G1/S transition of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QGH4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGI1-1", "uniprot_id": "F1QGI1_DANRE", "mass": 78749.0, "length": 703, "protein_name": "Discoidin, CUB and LCCL domain-containing protein 1", "gene_name": "dcbld1", "organism": "Zebrafish", "refseq_name": "discoidin, CUB and LCCL domain-containing protein 1 precursor", "refseq_ac": "NP_001035066", "gene_names_uniprotkb": "dcbld1; zgc:114082", "gene_names_refseq": "dcbld1; zgc:114082", "protein_names_uniprotkb": "Discoidin, CUB and LCCL domain-containing protein 1", "protein_names_refseq": "discoidin, CUB and LCCL domain-containing protein 1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:664747)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;29025973", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01010489.1, SRR32588727.937889.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On Feb 9, 2016 this sequence version replaced NP_001035066.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. There are no full-length transcripts supporting this RefSeq, and it is unknown if this exon combination exists in zebrafish; however, it is predicted based on partial transcript alignments and RNA-seq data., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N8H9", "ec_number_list": "", "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QGI1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGJ2-1", "uniprot_id": "F1QGJ2_DANRE", "mass": 53918.0, "length": 492, "protein_name": "b(0,+)-type amino acid transporter 1", "gene_name": "slc7a9", "organism": "Zebrafish", "refseq_name": "B(0,+)-type amino acid transporter 1", "refseq_ac": "XP_005169080", "gene_names_uniprotkb": "slc7a9", "gene_names_refseq": "slc7a9", "protein_names_uniprotkb": "b(0,+)-type amino acid transporter 1; Glycoprotein-associated amino acid transporter b0,+AT1; Solute carrier family 7 member 9", "protein_names_refseq": "B(0,+)-type amino acid transporter 1", "tax_id": 7955, "disease": "cystinuria (Disease Ontology:DOID:9266)", "pathway": " (dre:567117); (R-DRE-210991); (R-DRE-352230)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PQ03;A0AC58G572;A0AC58G574;X1WEN7", "ec_number_list": "", "go_molecular_function": "GO:0015179 L-amino acid transmembrane transporter activity", "go_cellular_component": "GO:0016324 apical plasma membrane", "go_biological_process": "GO:0003333 amino acid transmembrane transport;GO:0048793 pronephros development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QGJ2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGM0-1", "uniprot_id": "F1QGM0_DANRE", "mass": 15305.0, "length": 134, "protein_name": "Galectin", "gene_name": "lgals1l1", "organism": "Zebrafish", "refseq_name": "lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1", "refseq_ac": "NP_001005958", "gene_names_uniprotkb": "lgals1l1; Drgal1-L1; fe06c09; im:6905955; wu:fe06c09; zgc:101895", "gene_names_refseq": "Drgal1-L1; fe06c09; im:6905955; lgals1l1; wu:fe06c09; zgc:101895", "protein_names_uniprotkb": "Galectin", "protein_names_refseq": "lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1", "tax_id": 7955, "disease": "", "pathway": " (dre:326706)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "14693912;15750792;18763034;19263476;24706895;29666124;33316259;34968768;37024546;37884489", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH588630.1, EH435604.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH588630.1. On Dec 6, 2013 this sequence version replaced NP_001005958.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N2K6", "ec_number_list": "", "go_molecular_function": "GO:0043236 laminin binding;GO:0030246 carbohydrate binding;GO:0016936 galactoside binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QGM0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGP8-1", "uniprot_id": "F1QGP8_DANRE", "mass": 24557.0, "length": 213, "protein_name": "High mobility group protein B3a", "gene_name": "hmgb3a", "organism": "Zebrafish", "refseq_name": "high mobility group protein B3a", "refseq_ac": "NP_001116308", "gene_names_uniprotkb": "hmgb3a; wu:fb17a03; wu:fk52f12; zgc:162415", "gene_names_refseq": "hmgb3a; wu:fb17a03; wu:fk52f12; zgc:162415", "protein_names_uniprotkb": "High mobility group protein B3a", "protein_names_refseq": "high mobility group protein B3a", "tax_id": 7955, "disease": "syndromic microphthalmia 13 (Disease Ontology:DOID:0111811)", "pathway": " (dre:561025)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "20804857;24240475;26469318;27189481;28252024;28599080;36063238", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395013.696269.1, BC139583.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000007.1. On Mar 26, 2008 this sequence version replaced XP_689519.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYU2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1QGP8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGQ8-1", "uniprot_id": "F1QGQ8_DANRE", "mass": 196055.0, "length": 1792, "protein_name": "PR domain zinc finger protein 2", "gene_name": "prdm2b", "organism": "Zebrafish", "refseq_name": "PR domain zinc finger protein 2", "refseq_ac": "XP_002663834", "gene_names_uniprotkb": "prdm2b", "gene_names_refseq": "prdm2b", "protein_names_uniprotkb": "PR domain zinc finger protein 2", "protein_names_refseq": "PR domain zinc finger protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:797296)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002663834.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RHI6", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0042054 histone methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QGQ8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGV3-1", "uniprot_id": "F1QGV3_DANRE", "mass": 45068.0, "length": 415, "protein_name": "RNA-binding motif, single-stranded-interacting protein 3 isoform 2", "gene_name": "rbms3", "organism": "Zebrafish", "refseq_name": "RNA-binding motif, single-stranded-interacting protein 3 isoform 2", "refseq_ac": "NP_001417987", "gene_names_uniprotkb": "rbms3; zgc:153698", "gene_names_refseq": "rbms3; zgc:153698", "protein_names_uniprotkb": "RNA-binding motif, single-stranded-interacting protein 3 isoform 2", "protein_names_refseq": "RNA-binding motif, single-stranded-interacting protein 3 isoform 2", "tax_id": 7955, "disease": "", "pathway": " (dre:767747)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "22056673;23091072;26469318;28392072;30561090", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588724.2168735.1, SRR32588727.2550213.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jun 21, 2024 this sequence version replaced XP_005158285.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B543", "ec_number_list": "", "go_molecular_function": "GO:0003730 mRNA 3'-UTR binding;GO:0008143 poly(A) binding;GO:0008266 poly(U) RNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0017015 regulation of transforming growth factor beta receptor signaling pathway;GO:0061035 regulation of cartilage development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QGV3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QH05-1", "uniprot_id": "F1QH05_DANRE", "mass": 58596.0, "length": 518, "protein_name": "BUD13 homolog", "gene_name": "bud13", "organism": "Zebrafish", "refseq_name": "BUD13 homolog", "refseq_ac": "NP_001373169", "gene_names_uniprotkb": "bud13; fi47e11; si:dkeyp-69c1.6; wu:fi47e11", "gene_names_refseq": "bud13; fi47e11; si:dkeyp-69c1.6; wu:fi47e11", "protein_names_uniprotkb": "BUD13 homolog", "protein_names_refseq": "BUD13 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:564510)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;29969449", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116479.1, SRR26395013.644751.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On Jun 10, 2025 this sequence version replaced NP_001373169.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9Q368", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005684 U2-type spliceosomal complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QH05-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QHA1-1", "uniprot_id": "F1QHA1_DANRE", "mass": 64455.0, "length": 565, "protein_name": "FinTRIM family, member 14", "gene_name": "ftr14", "organism": "Zebrafish", "refseq_name": "finTRIM family, member 14", "refseq_ac": "NP_001038735", "gene_names_uniprotkb": "ftr14; fa98c08; wu:fa98c08; zgc:136585", "gene_names_refseq": "fa98c08; ftr14; wu:fa98c08; zgc:136585", "protein_names_uniprotkb": "FinTRIM family, member 14", "protein_names_refseq": "finTRIM family, member 14", "tax_id": 7955, "disease": "", "pathway": " (dre:692298); (R-DRE-5656169)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "19196451;21789205;26469318;30366094;30550990;30989427;36801427", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116597.1, GDQQ01000003.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Oct 26, 2010 this sequence version replaced NP_001038735.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYC2", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1QHA1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q7Y1-1", "uniprot_id": "F1Q7Y1_DANRE", "mass": 47826.0, "length": 455, "protein_name": "Acetylcholinesterase collagenic tail peptide isoform X2", "gene_name": "colq", "organism": "Zebrafish", "refseq_name": "acetylcholinesterase collagenic tail peptide isoform X2", "refseq_ac": "XP_005158029", "gene_names_uniprotkb": "colq", "gene_names_refseq": "colq", "protein_names_uniprotkb": "Acetylcholinesterase collagenic tail peptide isoform X2", "protein_names_refseq": "acetylcholinesterase collagenic tail peptide isoform X2", "tax_id": 7955, "disease": "congenital myasthenic syndrome 5 (Disease Ontology:DOID:0110667)", "pathway": " (dre:101886065)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B499", "ec_number_list": "", "go_molecular_function": "GO:0008201 heparin binding", "go_cellular_component": "", "go_biological_process": "GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q7Y1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "E9QG33-1", "uniprot_id": "LCA5_DANRE", "mass": 87017.0, "length": 754, "protein_name": "Lebercilin", "gene_name": "lca5", "organism": "Zebrafish", "refseq_name": "lebercilin isoform X2", "refseq_ac": "XP_009295284", "gene_names_uniprotkb": "lca5", "gene_names_refseq": "lca5", "protein_names_uniprotkb": "Lebercilin", "protein_names_refseq": "lebercilin isoform X2", "tax_id": 7955, "disease": "Leber congenital amaurosis 5 (Disease Ontology:DOID:0110215); Leber congenital amaurosis (Disease Ontology:DOID:14791)", "pathway": " (dre:100151323)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;31348989", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295284.2. COMPLETENESS: full length., [RefSeq]; Involved in intraflagellar protein (IFT) transport in photoreceptor cilia. Plays a role in the ciliary transport of photoreceptors outer segment proteins., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PWZ1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0005930 axoneme", "go_biological_process": "GO:0015031 protein transport;GO:0045494 photoreceptor cell maintenance;GO:0035845 photoreceptor cell outer segment organization;GO:1903546 protein localization to photoreceptor outer segment", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E9QG33-1", "record_type": "protein" }, { "uniprot_canonical_ac": "E7FEC8-1", "uniprot_id": "E7FEC8_DANRE", "mass": 93201.0, "length": 840, "protein_name": "Potassium voltage-gated channel subfamily KQT member 2 isoform X2", "gene_name": "kcnq2b", "organism": "Zebrafish", "refseq_name": "potassium voltage-gated channel subfamily KQT member 2 isoform X2", "refseq_ac": "XP_009301043", "gene_names_uniprotkb": "kcnq2b", "gene_names_refseq": "kcnq2b", "protein_names_uniprotkb": "Potassium voltage-gated channel subfamily KQT member 2 isoform X2", "protein_names_refseq": "potassium voltage-gated channel subfamily KQT member 2 isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:100537363)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B0U5", "ec_number_list": "2.7.11.1;1.5.1.2", "go_molecular_function": "GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0008076 voltage-gated potassium channel complex", "go_biological_process": "GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FEC8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A3QK10-1", "uniprot_id": "A3QK10_DANRE", "mass": 65245.0, "length": 581, "protein_name": "Frizzled-9", "gene_name": "fzd9a", "organism": "Zebrafish", "refseq_name": "frizzled-9", "refseq_ac": "XP_021332312", "gene_names_uniprotkb": "fzd9a", "gene_names_refseq": "fzd9a", "protein_names_uniprotkb": "Frizzled-9", "protein_names_refseq": "frizzled-9", "tax_id": 7955, "disease": "Williams-Beuren syndrome (Disease Ontology:DOID:1928)", "pathway": " (dre:557447)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PLG5", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0017147 Wnt-protein binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0005886 plasma membrane", "go_biological_process": "GO:0060070 canonical Wnt signaling pathway;GO:0035567 non-canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A3QK10-1", "record_type": "protein" }, { "uniprot_canonical_ac": "E7FE65-1", "uniprot_id": "E7FE65_DANRE", "mass": 53456.0, "length": 468, "protein_name": "Glycosyltransferase family 92 protein", "gene_name": "si:zfos-464b6.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:zfos-464b6.2", "refseq_ac": "XP_003200542", "gene_names_uniprotkb": "si:zfos-464b6.2", "gene_names_refseq": "si:zfos-464b6.2", "protein_names_uniprotkb": "Glycosyltransferase family 92 protein; 2.4.1.-", "protein_names_refseq": "uncharacterized protein si:zfos-464b6.2", "tax_id": 7955, "disease": "", "pathway": " (dre:794433)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RT75", "ec_number_list": "", "go_molecular_function": "GO:0016757 glycosyltransferase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FE65-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QGF8-1", "uniprot_id": "F1QGF8_DANRE", "mass": 41964.0, "length": 396, "protein_name": "Paired box protein Pax-5", "gene_name": "pax5", "organism": "Zebrafish", "refseq_name": "paired box protein Pax-5", "refseq_ac": "NP_571713", "gene_names_uniprotkb": "pax5; Pax[Zf-b]; noi; pax2.1; pax2a; paxzf-b", "gene_names_refseq": "Pax[Zf-b]; noi; pax2.1; pax2a; pax5; paxzf-b", "protein_names_uniprotkb": "Paired box protein Pax-5", "protein_names_refseq": "No isthmus protein; paired box gene 5; paired box protein Pax-5", "tax_id": 7955, "disease": "acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:60636)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11641225;12917294;15378083;1811936;38117861;38136366;38235293;38526188;38637503;9671579", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.245409.1, SRR32588717.53526571.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476795, SAMEA898401 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 20, 2025 this sequence version replaced NP_571713.1. Sequence Note:. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PBT6", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0060005 vestibular reflex;GO:0060118 vestibular receptor cell development;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009952 anterior/posterior pattern specification", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QGF8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RD83-1", "uniprot_id": "F1RD83_DANRE", "mass": 41855.0, "length": 363, "protein_name": "Uncharacterized protein isoform X1; Uncharacterized protein isoform X2", "gene_name": "znf1069", "organism": "Zebrafish", "refseq_name": "zinc finger protein 1069", "refseq_ac": "NP_001103337", "gene_names_uniprotkb": "znf1069; LOC141375011", "gene_names_refseq": "LOC141375011", "protein_names_uniprotkb": "Uncharacterized protein isoform X1; Uncharacterized protein isoform X2", "protein_names_refseq": "zinc finger protein 1069", "tax_id": 7955, "disease": "", "pathway": " (dre:100126141); (dre:141375011)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588714.34864073.1, SRR32588717.38947822.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476813, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On or before May 30, 2025 this sequence version replaced XP_017211189.1, NP_001103337.1., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z6G8;A0AC58JEC8;A0AC58JEE2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RD83-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W2U6-1", "uniprot_id": "F8W2U6_DANRE", "mass": 14790.0, "length": 132, "protein_name": "Galectin", "gene_name": "lgals2b", "organism": "Zebrafish", "refseq_name": "lectin, galactoside-binding, soluble, 2b", "refseq_ac": "NP_956808", "gene_names_uniprotkb": "lgals2b; Drgal1-L3; gals2b; lgals1l3; zgc:66283", "gene_names_refseq": "Drgal1-L3; gals2b; lgals1l3; lgals2b; zgc:66283", "protein_names_uniprotkb": "Galectin", "protein_names_refseq": "lectin, galactoside-binding, soluble, 1 (galectin 1)-like 3; lectin, galactoside-binding, soluble, 2b", "tax_id": 7955, "disease": "myocardial infarction (Disease Ontology:DOID:5844)", "pathway": " (dre:393486); (R-DRE-381426); (R-DRE-8957275)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "14693912;15750792;17043243;26469318;27189481;28888969;30728369;32176570;32528473;33316259", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EE701702.1, EH491836.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On or before Jun 21, 2024 this sequence version replaced XP_005172121.1, NP_956808.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BJG5", "ec_number_list": "", "go_molecular_function": "GO:0030246 carbohydrate binding;GO:0043236 laminin binding;GO:0016936 galactoside binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0002040 sprouting angiogenesis;GO:0001944 vasculature development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F8W2U6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8E9-1", "uniprot_id": "F1R8E9_DANRE", "mass": 132589.0, "length": 1173, "protein_name": "Rab effector MyRIP-like isoform X1", "gene_name": "myripa", "organism": "Zebrafish", "refseq_name": "rab effector MyRIP-like isoform X1", "refseq_ac": "XP_690172", "gene_names_uniprotkb": "myripa", "gene_names_refseq": "myripa", "protein_names_uniprotkb": "Rab effector MyRIP-like isoform X1", "protein_names_refseq": "rab effector MyRIP-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561671)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_690172.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7D8", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0031267 small GTPase binding;GO:0003779 actin binding;GO:0017022 myosin binding", "go_cellular_component": "GO:0048471 perinuclear region of cytoplasm;GO:0030864 cortical actin cytoskeleton", "go_biological_process": "GO:0006886 intracellular protein transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R8E9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6PEI8-1", "uniprot_id": "F6PEI8_DANRE", "mass": 91032.0, "length": 802, "protein_name": "Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D", "gene_name": "hhipl1", "organism": "Zebrafish", "refseq_name": "HHIP-like protein 1", "refseq_ac": "NP_001314829", "gene_names_uniprotkb": "hhipl1", "gene_names_refseq": "hhipl1", "protein_names_uniprotkb": "Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D", "protein_names_refseq": "HHIP-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100002738)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "20339547;25139857;26469318;27189481;37713421", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC134904.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC134904.1. On May 28, 2016 this sequence version replaced XP_001337342.3., [RefSeq]; Binds to extracellular matrix proteins. Binds to pathogen-associated molecular patterns (PAMPs) present on the cell walls of Gram-positive and Gram-negative bacteria and fungi, behaving as a pattern recognition receptor (PRR). Induces bacterial and fungal aggregation and subsequent inhibition of PAMP-induced cytokine release. Does not possess intrinsic bactericidal activity. May play a role in the innate defense and homeostasis of certain epithelial surfaces., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8G5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F6PEI8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QX13-1", "uniprot_id": "F1QX13_DANRE", "mass": 184690.0, "length": 1651, "protein_name": "Complement C3a.3 precursor", "gene_name": "c3a.3", "organism": "Zebrafish", "refseq_name": "complement C3a.3 precursor", "refseq_ac": "NP_001032313", "gene_names_uniprotkb": "c3a.3; C3-3; c3-2; c3c; unp301; zgc:103610", "gene_names_refseq": "C3-3; c3-2; c3a.3; c3c; unp301; zgc:103610", "protein_names_uniprotkb": "Complement C3a.3 precursor", "protein_names_refseq": "c3.3; complement C3a.3 precursor; complement component C3-2; complement component c3a, duplicate 3; complement component c3c", "tax_id": 7955, "disease": "paroxysmal nocturnal hemoglobinuria (Disease Ontology:DOID:0060284); lupus nephritis (Disease Ontology:DOID:0080162); atypical hemolytic-uremic syndrome (Disease Ontology:DOID:0080301); COVID-19 (Disease Ontology:DOID:0080600); erythema nodosum (Disease Ontology:DOID:0080750); age related macular degeneration 7 (Disease Ontology:DOID:0110019); age related macular degeneration 9 (Disease Ontology:DOID:0110021); autosomal recessive polycystic kidney disease (Disease Ontology:DOID:0110861); dry eye syndrome (Disease Ontology:DOID:10140); silicosis (Disease Ontology:DOID:10325); Alzheimer's disease (Disease Ontology:DOID:10652); Kuhnt-Junius degeneration (Disease Ontology:DOID:10873); lepromatous leprosy (Disease Ontology:DOID:10887); sickle cell anemia (Disease Ontology:DOID:10923); adult respiratory distress syndrome (Disease Ontology:DOID:11394); Fuchs' endothelial dystrophy (Disease Ontology:DOID:11555); factor VIII deficiency (Disease Ontology:DOID:12134); pulmonary sarcoidosis (Disease Ontology:DOID:13406); alcoholic liver cirrhosis (Disease Ontology:DOID:14018); anterior uveitis (Disease Ontology:DOID:1407); boutonneuse fever (Disease Ontology:DOID:14095); opiate dependence (Disease Ontology:DOID:2559); asthma (Disease Ontology:DOID:2841); membranoproliferative glomerulonephritis (Disease Ontology:DOID:2920); pulmonary tuberculosis (Disease Ontology:DOID:2957); IgA glomerulonephritis (Disease Ontology:DOID:2986); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); HTLV-1-associated myelopathy/tropical spastic paraparesis (Disease Ontology:DOID:321); atopic dermatitis (Disease Ontology:DOID:3310); mood disorder (Disease Ontology:DOID:3324); systemic scleroderma (Disease Ontology:DOID:418); macular degeneration (Disease Ontology:DOID:4448); rhinitis (Disease Ontology:DOID:4483); arteriolosclerosis (Disease Ontology:DOID:5162); human immunodeficiency virus infectious disease (Disease Ontology:DOID:526); conjunctivitis (Disease Ontology:DOID:6195); rheumatoid arthritis (Disease Ontology:DOID:7148); complement component 3 deficiency (Disease Ontology:DOID:8354); systemic lupus erythematosus (Disease Ontology:DOID:9074); ocular hypertension (Disease Ontology:DOID:9282); acute myocardial infarction (Disease Ontology:DOID:9408); type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": " (dre:565074); (R-DRE-173736); (R-DRE-174577); (R-DRE-375276); (R-DRE-381426); (R-DRE-418594); (R-DRE-6798695); (R-DRE-8957275); (R-DRE-977606)", "pathway_count": 9, "publication_count": 10, "publication_id_list": "18248169;18657447;19200601;22155693;32630437;32810528;33418081;35748539;36232766;9874500", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AB235998.1, SRR32588715.1147189.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476758, SAMEA4476759 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 20, 2016 this sequence version replaced NP_001032313.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 42, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7W7", "ec_number_list": "", "go_molecular_function": "GO:0004866 endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006955 immune response;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QX13-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QTE3-1", "uniprot_id": "F1QTE3_DANRE", "mass": 73840.0, "length": 669, "protein_name": "Beta-adducin isoform 1", "gene_name": "add2", "organism": "Zebrafish", "refseq_name": "beta-adducin isoform 1", "refseq_ac": "NP_001352363", "gene_names_uniprotkb": "add2; si:dkey-202n14.5", "gene_names_refseq": "add2; si:dkey-202n14.5", "protein_names_uniprotkb": "Beta-adducin isoform 1", "protein_names_refseq": "beta-adducin isoform 1", "tax_id": 7955, "disease": "hereditary spherocytosis type 1 (Disease Ontology:DOID:0110916); hypertension (Disease Ontology:DOID:10763); IgA glomerulonephritis (Disease Ontology:DOID:2986)", "pathway": " (dre:570147)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "18541024;24396069;26469318;27189481;27526058;28252024;30309860;35514229", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01000562.1, SRR32588730.28727647.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Jun 25, 2025 this sequence version replaced NP_001352363.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AS01", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding;GO:0005516 calmodulin binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0014069 postsynaptic density", "go_biological_process": "GO:0051016 barbed-end actin filament capping", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1QTE3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R5N4-1", "uniprot_id": "F1R5N4_DANRE", "mass": 80495.0, "length": 737, "protein_name": "Ligand of Numb protein X 2a", "gene_name": "lnx2a", "organism": "Zebrafish", "refseq_name": "ligand of Numb protein X 2a", "refseq_ac": "NP_001106696", "gene_names_uniprotkb": "lnx2a; lnx2", "gene_names_refseq": "lnx2a; lnx2", "protein_names_uniprotkb": "Ligand of Numb protein X 2a", "protein_names_refseq": "ligand of Numb protein X 2a; ligand of numb-protein X 2", "tax_id": 7955, "disease": "", "pathway": " (dre:553331)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26392552;27189481;28362803;31999691", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: FJ156085.1, GDQH01027022.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FJ156085.1, EB950577.1, EH583415.1, JBMGRA010000024.1, EB957408.1, DT867995.1 and BG305543.1. On May 1, 2009 this sequence version replaced NP_001106696.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Data show that the phenotype characterized by inhibition of exocrine cell differentiation requires inactivation of both ubiquitin ligases Lnx2a and Lnx2b., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFK9", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0061630 ubiquitin protein ligase activity;GO:0030165 PDZ domain binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "", "go_biological_process": "GO:0007399 nervous system development;GO:0031017 exocrine pancreas development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1R5N4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9L1-1", "uniprot_id": "F1R9L1_DANRE", "mass": 120596.0, "length": 1078, "protein_name": "Semaphorin-5A isoform X1", "gene_name": "sema5a", "organism": "Zebrafish", "refseq_name": "semaphorin-5A isoform X1", "refseq_ac": "XP_005162676", "gene_names_uniprotkb": "sema5a; wu:fa95e03; wu:fi41a04", "gene_names_refseq": "sema5a; wu:fa95e03; wu:fi41a04", "protein_names_uniprotkb": "Semaphorin-5A isoform X1", "protein_names_refseq": "semaphorin-5A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561295); (R-DRE-416700); (R-DRE-5173214)", "pathway_count": 3, "publication_count": 6, "publication_id_list": "19059233;26469318;26773060;27049946;27189481;31908317", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A286YBG6;A0A8M2B9M5;A0AC58IQQ9", "ec_number_list": "", "go_molecular_function": "GO:0030215 semaphorin receptor binding;GO:0045499 chemorepellent activity", "go_cellular_component": "GO:0016020 membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0007411 axon guidance;GO:0048675 axon extension;GO:0030335 positive regulation of cell migration;GO:0071526 semaphorin-plexin signaling pathway;GO:0001755 neural crest cell migration", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1R9L1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQA9-1", "uniprot_id": "F1QQA9_DANRE", "mass": 32416.0, "length": 301, "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "rnf115b", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase RNF115 isoform X1", "refseq_ac": "XP_003200594", "gene_names_uniprotkb": "rnf115b", "gene_names_refseq": "rnf115b", "protein_names_uniprotkb": "RING-type E3 ubiquitin transferase; 2.3.2.27", "protein_names_refseq": "E3 ubiquitin-protein ligase RNF115 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563879)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RFL6", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0000209 protein polyubiquitination;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QQA9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJL7-1", "uniprot_id": "F1QJL7_DANRE", "mass": 16905.0, "length": 145, "protein_name": "Trafficking protein particle complex subunit", "gene_name": "trappc1", "organism": "Zebrafish", "refseq_name": "trafficking protein particle complex subunit 1 isoform 2", "refseq_ac": "NP_001002742", "gene_names_uniprotkb": "trappc1; zgc:100969", "gene_names_refseq": "trappc1; zgc:100969", "protein_names_uniprotkb": "Trafficking protein particle complex subunit", "protein_names_refseq": "trafficking protein particle complex 1; trafficking protein particle complex subunit 1 isoform 2", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162); melanoma (Disease Ontology:DOID:1909)", "pathway": " (dre:437015)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076411.1, CK685285.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Jun 14, 2024 this sequence version replaced NP_001002742.1., [RefSeq]; May play a role in vesicular transport from endoplasmic reticulum to Golgi., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BHY9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0030008 TRAPP complex", "go_biological_process": "GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QJL7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QMN6-1", "uniprot_id": "F1QMN6_DANRE", "mass": 385779.0, "length": 3476, "protein_name": "Msx2-interacting protein", "gene_name": "spen", "organism": "Zebrafish", "refseq_name": "msx2-interacting protein isoform X1", "refseq_ac": "XP_003201252", "gene_names_uniprotkb": "spen", "gene_names_refseq": "spen", "protein_names_uniprotkb": "Msx2-interacting protein; SMART/HDAC1-associated repressor protein; SPEN homolog", "protein_names_refseq": "msx2-interacting protein isoform X1", "tax_id": 7955, "disease": "esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); nasopharynx carcinoma (Disease Ontology:DOID:9261)", "pathway": " (dre:503940); (R-DRE-9013422)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003201252.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RN36", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0003714 transcription corepressor activity;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007219 Notch signaling pathway;GO:0060047 heart contraction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QMN6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJ35-1", "uniprot_id": "F1QJ35_DANRE", "mass": 57693.0, "length": 504, "protein_name": "Nuclear receptor-binding protein 2", "gene_name": "nrbp2b", "organism": "Zebrafish", "refseq_name": "nuclear receptor-binding protein 2b", "refseq_ac": "NP_001124089", "gene_names_uniprotkb": "nrbp2b; zgc:194780", "gene_names_refseq": "nrbp2b; zgc:194780", "protein_names_uniprotkb": "Nuclear receptor-binding protein 2", "protein_names_refseq": "nuclear receptor-binding protein 2b", "tax_id": 7955, "disease": "", "pathway": " (dre:562626)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163375.1, GFIL01046829.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On or before Aug 5, 2009 this sequence version replaced XP_691098.2, NP_001124089.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; May regulate apoptosis of neural progenitor cells during their differentiation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ61", "ec_number_list": "", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004672 protein kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0012505 endomembrane system", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0030182 neuron differentiation;GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QJ35-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NXI0-1", "uniprot_id": "F6NXI0_DANRE", "mass": 56518.0, "length": 485, "protein_name": "6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 4b isoform 1", "gene_name": "pfkfb4b", "organism": "Zebrafish", "refseq_name": "6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 4b isoform 1", "refseq_ac": "NP_001417915", "gene_names_uniprotkb": "pfkfb4b; pfkfb4l; pfkfb4", "gene_names_refseq": "pfkfb4b; pfkfb4l; pfkfb4", "protein_names_uniprotkb": "6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 4b isoform 1", "protein_names_refseq": "6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 4b isoform 1; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, like", "tax_id": 7955, "disease": "", "pathway": " (dre:386663); (R-DRE-9634600)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "23458150;24423866;24926785;25756310;26040990;26469318;27189481;34329618;35886843;36846912", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC060931.1, SRR32588716.24332472.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Dec 4, 2025 this sequence version replaced NP_001417915.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BDC1", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0003873 6-phosphofructo-2-kinase activity;GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0006000 fructose metabolic process;GO:0006003 fructose 2,6-bisphosphate metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F6NXI0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R1W8-1", "uniprot_id": "F1R1W8_DANRE", "mass": 64736.0, "length": 569, "protein_name": "Protein AATF isoform 1", "gene_name": "aatf", "organism": "Zebrafish", "refseq_name": "protein AATF isoform 1", "refseq_ac": "NP_001077297", "gene_names_uniprotkb": "aatf; cb109; sb:cb109; wu:fc13d05; zgc:162071", "gene_names_refseq": "aatf; cb109; sb:cb109; wu:fc13d05; zgc:162071", "protein_names_uniprotkb": "Protein AATF isoform 1", "protein_names_refseq": "protein AATF isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:559477)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27189481;33829511;34315984", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01009967.1, GFIL01000029.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Dec 1, 2012 this sequence version replaced NP_001077297.2. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDX7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R1W8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSA4-1", "uniprot_id": "F1QSA4_DANRE", "mass": 72539.0, "length": 653, "protein_name": "Myelin-associated glycoprotein isoform 1 precursor; Myelin-associated glycoprotein isoform X1", "gene_name": "mag", "organism": "Zebrafish", "refseq_name": "myelin-associated glycoprotein isoform 1 precursor", "refseq_ac": "NP_001007063", "gene_names_uniprotkb": "mag; siglec-4", "gene_names_refseq": "mag; siglec-4", "protein_names_uniprotkb": "Myelin-associated glycoprotein isoform 1 precursor; Myelin-associated glycoprotein isoform X1", "protein_names_refseq": "myelin-associated glycoprotein isoform 1 precursor; sialic-acid binding protein-4", "tax_id": 7955, "disease": "hereditary spastic paraplegia 75 (Disease Ontology:DOID:0110820); sciatic neuropathy (Disease Ontology:DOID:11446); multiple sclerosis (Disease Ontology:DOID:2377); middle cerebral artery infarction (Disease Ontology:DOID:3525); nerve compression syndrome (Disease Ontology:DOID:573)", "pathway": " (dre:474346); (R-DRE-193634); (R-DRE-210991)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "15229193;16109975;18296487;19765300;20692250;33300869;33745965;34831364;35401113;37183607", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AJ628727.1, SRR32588718.9430494.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Sep 4, 2015 this sequence version replaced NP_001007063.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N305;A0AC58HAS7;A0AC58HAT3;A0AC58HAT4", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding;GO:0030246 carbohydrate binding;GO:0033691 sialic acid binding", "go_cellular_component": "GO:0016020 membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QSA4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QR96-1", "uniprot_id": "F1QR96_DANRE", "mass": 60460.0, "length": 533, "protein_name": "Coronin", "gene_name": "coro2aa", "organism": "Zebrafish", "refseq_name": "coronin-2A isoform X2", "refseq_ac": "XP_005159933", "gene_names_uniprotkb": "coro2aa; coro2a; wu:fc02b08; zgc:73379", "gene_names_refseq": "coro2aa; coro2a; wu:fc02b08; zgc:73379", "protein_names_uniprotkb": "Coronin", "protein_names_refseq": "coronin-2A isoform X2", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B6N4", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005884 actin filament;GO:0005886 plasma membrane", "go_biological_process": "GO:0007015 actin filament organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QR96-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RE28-1", "uniprot_id": "F1RE28_DANRE", "mass": 77106.0, "length": 697, "protein_name": "Methionine synthase reductase", "gene_name": "mtrr", "organism": "Zebrafish", "refseq_name": "methionine synthase reductase", "refseq_ac": "NP_001373459", "gene_names_uniprotkb": "mtrr", "gene_names_refseq": "mtrr", "protein_names_uniprotkb": "Methionine synthase reductase; 1.16.1.8; Aquacobalamin reductase", "protein_names_refseq": "methionine synthase reductase", "tax_id": 7955, "disease": "visceral heterotaxy (Disease Ontology:DOID:0050545); myelodysplastic syndrome (Disease Ontology:DOID:0050908); non-Hodgkin lymphoma (Disease Ontology:DOID:0060060); anencephaly (Disease Ontology:DOID:0060668); spina bifida (Disease Ontology:DOID:0080016); homocystinuria-megaloblastic anemia cblE type (Disease Ontology:DOID:0112255); heart disease (Disease Ontology:DOID:114); Parkinson's disease (Disease Ontology:DOID:14330); heart septal defect (Disease Ontology:DOID:1681); pancreatic cancer (Disease Ontology:DOID:1793); meningioma (Disease Ontology:DOID:3565); hepatocellular carcinoma (Disease Ontology:DOID:684); abdominal aortic aneurysm (Disease Ontology:DOID:7693); ulcerative colitis (Disease Ontology:DOID:8577); acute myeloid leukemia (Disease Ontology:DOID:9119); homocystinuria (Disease Ontology:DOID:9263); multiple myeloma (Disease Ontology:DOID:9538); acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:560667); (R-DRE-156581); (R-DRE-1614635); (R-DRE-9759218)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "26469318;31094706", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01027117.1, GDQQ01017118.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Aug 29, 2020 this sequence version replaced XP_689157.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 18, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TD34", "ec_number_list": "1.16.1.8;1.16.1.6;2.5.1.151", "go_molecular_function": "GO:0010181 FMN binding;GO:0030586 [methionine synthase] reductase (NADPH) activity;GO:0050660 flavin adenine dinucleotide binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005737 cytoplasm", "go_biological_process": "GO:0009086 methionine biosynthetic process;GO:0009235 cobalamin metabolic process;GO:0046655 folic acid metabolic process;GO:0050667 homocysteine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1RE28-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R5K6-1", "uniprot_id": "F1R5K6_DANRE", "mass": 55054.0, "length": 483, "protein_name": "Noelin-2a isoform X1", "gene_name": "olfm2a", "organism": "Zebrafish", "refseq_name": "noelin-2a isoform X1", "refseq_ac": "XP_005163803", "gene_names_uniprotkb": "olfm2a; olfm2; wu:fi27g06; wu:fi30a05; zgc:55410", "gene_names_refseq": "olfm2a; olfm2; wu:fi27g06; wu:fi30a05; zgc:55410", "protein_names_uniprotkb": "Noelin-2a isoform X1", "protein_names_refseq": "noelin-2a isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BB19", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0045202 synapse;GO:0005615 extracellular space", "go_biological_process": "GO:0014032 neural crest cell development;GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R5K6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7M1-1", "uniprot_id": "F1R7M1_DANRE", "mass": 92174.0, "length": 847, "protein_name": "Rho GTPase-activating protein 17", "gene_name": "arhgap17a", "organism": "Zebrafish", "refseq_name": "rho GTPase-activating protein 17a isoform 1", "refseq_ac": "NP_001017592", "gene_names_uniprotkb": "arhgap17a; zgc:110306", "gene_names_refseq": "arhgap17a; zgc:110306", "protein_names_uniprotkb": "Rho GTPase-activating protein 17; Rho-type GTPase-activating protein 17", "protein_names_refseq": "rho GTPase-activating protein 17a isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:550254); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013406); (R-DRE-9013423)", "pathway_count": 6, "publication_count": 2, "publication_id_list": "25486407;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01006445.1, SRR26395013.887871.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Jun 25, 2025 this sequence version replaced NP_001017592.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Rho GTPase-activating protein involved in the maintenance of tight junction by regulating the activity of CDC42, thereby playing a central role in apical polarity of epithelial cells. Specifically acts as a GTPase activator for the CDC42 GTPase by converting it to an inactive GDP-bound state. The complex formed with AMOT acts by regulating the uptake of polarity proteins at tight junctions, possibly by deciding whether tight junction transmembrane proteins are recycled back to the plasma membrane or sent elsewhere. Participates in the Ca(2+)-dependent regulation of exocytosis, possibly by catalyzing GTPase activity of Rho family proteins and by inducing the reorganization of the cortical actin filaments. Acts as a GTPase activator in vitro for RAC1., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B4K2", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0017124 SH3 domain binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005923 bicellular tight junction;GO:0016020 membrane;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0032956 regulation of actin cytoskeleton organization;GO:0051058 negative regulation of small GTPase mediated signal transduction;GO:0035020 regulation of Rac protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R7M1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8J7-1", "uniprot_id": "F1R8J7_DANRE", "mass": 110428.0, "length": 988, "protein_name": "Ankycorbin", "gene_name": "rai14", "organism": "Zebrafish", "refseq_name": "ankycorbin", "refseq_ac": "NP_001104687", "gene_names_uniprotkb": "rai14; im:7136186; im:7148445; zgc:101072", "gene_names_refseq": "im:7136186; im:7148445; rai14; zgc:101072", "protein_names_uniprotkb": "Ankycorbin", "protein_names_refseq": "ankycorbin", "tax_id": 7955, "disease": "", "pathway": " (dre:794796)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23663777;28252024;34557935", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155172.1, GFIL01032174.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476738, SAMEA4476739 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On or before Mar 21, 2009 this sequence version replaced NP_001002737.1, NP_001104687.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NGV4", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R8J7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZ57-1", "uniprot_id": "F1QZ57_DANRE", "mass": 59358.0, "length": 552, "protein_name": "Poly(U)-binding-splicing factor PUF60a isoform X1", "gene_name": "puf60a", "organism": "Zebrafish", "refseq_name": "poly(U)-binding-splicing factor PUF60a isoform X1", "refseq_ac": "XP_005163557", "gene_names_uniprotkb": "puf60a; fc21a05; wu:fc21a05; wu:fi43a08", "gene_names_refseq": "fc21a05; puf60a; wu:fc21a05; wu:fi43a08", "protein_names_uniprotkb": "Poly(U)-binding-splicing factor PUF60a isoform X1", "protein_names_refseq": "poly(U)-binding-splicing factor PUF60a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-72163); (R-DRE-9770562); (R-DRE-9943411)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BAM3", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006397 mRNA processing;GO:0006915 apoptotic process;GO:0008380 RNA splicing;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QZ57-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QIA6-1", "uniprot_id": "F1QIA6_DANRE", "mass": 77264.0, "length": 680, "protein_name": "Mitochondrial intermediate peptidase", "gene_name": "mipepb", "organism": "Zebrafish", "refseq_name": "mitochondrial intermediate peptidase isoform X1", "refseq_ac": "XP_685496", "gene_names_uniprotkb": "mipepb", "gene_names_refseq": "mipepb", "protein_names_uniprotkb": "Mitochondrial intermediate peptidase; 3.4.24.59", "protein_names_refseq": "mitochondrial intermediate peptidase isoform X1", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 31 (Disease Ontology:DOID:0111488); lipodystrophy (Disease Ontology:DOID:811)", "pathway": " (dre:557349)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_685496.1. COMPLETENESS: full length., [RefSeq]; Cleaves proteins, imported into the mitochondrion, to their mature size., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TDA3", "ec_number_list": "", "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0006508 proteolysis;GO:0006627 protein processing involved in protein targeting to mitochondrion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QIA6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NZA7-1", "uniprot_id": "F6NZA7_DANRE", "mass": 39779.0, "length": 354, "protein_name": "Formyl peptide receptor 2", "gene_name": "si:ch73-160i9.3", "organism": "Zebrafish", "refseq_name": "formyl peptide receptor 2", "refseq_ac": "XP_001332899", "gene_names_uniprotkb": "si:ch73-160i9.3; si:ch211-171h4.6", "gene_names_refseq": "si:ch211-171h4.6", "protein_names_uniprotkb": "Formyl peptide receptor 2", "protein_names_refseq": "formyl peptide receptor 2", "tax_id": 7955, "disease": "", "pathway": " (dre:793188); (dre:793473)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PYQ8;A0AC58I080", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004875 complement receptor activity", "go_cellular_component": "GO:0016020 membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0006935 chemotaxis;GO:0002430 complement receptor mediated signaling pathway;GO:0006954 inflammatory response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F6NZA7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QWI2-1", "uniprot_id": "F1QWI2_DANRE", "mass": 134097.0, "length": 1190, "protein_name": "Integrin alpha-11a precursor", "gene_name": "itga11a", "organism": "Zebrafish", "refseq_name": "integrin alpha-11a precursor", "refseq_ac": "NP_001166098", "gene_names_uniprotkb": "itga11a; itga11", "gene_names_refseq": "itga11a; itga11", "protein_names_uniprotkb": "Integrin alpha-11a precursor", "protein_names_refseq": "integrin alpha-11a precursor; integrin, alpha 11", "tax_id": 7955, "disease": "pancreatic cancer (Disease Ontology:DOID:1793)", "pathway": " (dre:541475)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "25555130;26846883;31042481;34439993;36680903", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.13318004.1, SRR32588716.15966117.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Jun 25, 2025 this sequence version replaced NP_001166098.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NW01", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0008305 integrin complex;GO:0009986 cell surface;GO:0034681 integrin alpha11-beta1 complex", "go_biological_process": "GO:0007155 cell adhesion;GO:0007229 integrin-mediated signaling pathway;GO:0098609 cell-cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QWI2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6P2R0-1", "uniprot_id": "F6P2R0_DANRE", "mass": 94465.0, "length": 890, "protein_name": "Polyhomeotic-like protein 2b", "gene_name": "phc2b", "organism": "Zebrafish", "refseq_name": "polyhomeotic-like protein 2b", "refseq_ac": "NP_957496", "gene_names_uniprotkb": "phc2b; PHC2; zgc:56685", "gene_names_refseq": "PHC2; phc2b; zgc:56685", "protein_names_uniprotkb": "Polyhomeotic-like protein 2b", "protein_names_refseq": "gene name (z): polyhomeotic homolog 2b; polyhomeotic-like 2b; polyhomeotic-like protein 2b", "tax_id": 7955, "disease": "", "pathway": " (dre:394177); (R-DRE-2559580); (R-DRE-3108214); (R-DRE-3899300); (R-DRE-4570464); (R-DRE-8939243); (R-DRE-8953750)", "pathway_count": 7, "publication_count": 6, "publication_id_list": "18629171;21195142;23946537;26469318;32296464;35886872", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC139540.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC139540.1. On Oct 1, 2011 this sequence version replaced NP_957496.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PJ15", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003682 chromatin binding;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0035102 PRC1 complex", "go_biological_process": "GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F6P2R0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QHW0-1", "uniprot_id": "F1QHW0_DANRE", "mass": 51768.0, "length": 463, "protein_name": "Cytochrome P450 20A1", "gene_name": "cyp20a1", "organism": "Zebrafish", "refseq_name": "cytochrome P450 20A1", "refseq_ac": "NP_998497", "gene_names_uniprotkb": "cyp20a1; wu:fa10c06; zgc:63986", "gene_names_refseq": "cyp20a1; wu:fa10c06; zgc:63986", "protein_names_uniprotkb": "Cytochrome P450 20A1", "protein_names_refseq": "cytochrome P450 20A1", "tax_id": 7955, "disease": "", "pathway": " (dre:406641)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "21087487;26469318;26853319;28252024;29904357;33159854;34903767;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01003781.1, GFIL01007907.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Jun 12, 2025 this sequence version replaced NP_998497.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Orphan cytochrome P450 20a1 CRISPR/Cas9 mutants and neurobehavioral phenotypes in zebrafish. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PPN0", "ec_number_list": "", "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0004497 monooxygenase activity;GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen", "go_cellular_component": "", "go_biological_process": "GO:0036269 swimming behavior;GO:0071632 optomotor response", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QHW0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QNE0-1", "uniprot_id": "F1QNE0_DANRE", "mass": 67998.0, "length": 622, "protein_name": "Nuclear autoantigenic sperm protein", "gene_name": "nasp", "organism": "Zebrafish", "refseq_name": "nuclear autoantigenic sperm protein", "refseq_ac": "NP_956076", "gene_names_uniprotkb": "nasp; wu:fd20g12; zgc:56007; zgc:85651", "gene_names_refseq": "nasp; wu:fd20g12; zgc:56007; zgc:85651", "protein_names_uniprotkb": "Nuclear autoantigenic sperm protein", "protein_names_refseq": "nuclear autoantigenic sperm protein", "tax_id": 7955, "disease": "ovarian cancer (Disease Ontology:DOID:2394)", "pathway": " (dre:799570)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "16109975;18963085;24198278;27189481;32640983", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045857.1, SRR32588716.25970705.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1, EH473871.1, EH441964.1, EH457062.1 and EH482784.1. On Sep 3, 2015 this sequence version replaced NP_956076.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PBV7", "ec_number_list": "", "go_molecular_function": "GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm", "go_biological_process": "GO:0006335 DNA replication-dependent chromatin assembly;GO:0034080 CENP-A containing chromatin assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QNE0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QKW5-1", "uniprot_id": "F1QKW5_DANRE", "mass": 49573.0, "length": 434, "protein_name": "ADP-ribosylation factor-like protein 13A", "gene_name": "arl13a", "organism": "Zebrafish", "refseq_name": "ADP-ribosylation factor-like protein 13A isoform 1", "refseq_ac": "NP_957112", "gene_names_uniprotkb": "arl13a; zgc:73398", "gene_names_refseq": "arl13a; zgc:73398", "protein_names_uniprotkb": "ADP-ribosylation factor-like protein 13A", "protein_names_refseq": "ADP-ribosylation factor-like protein 13A isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:793658)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;30009987;37070960", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059702.1, SRR26395015.324768.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On or before Jul 5, 2024 this sequence version replaced XP_005173366.1, NP_957112.1., [RefSeq]; Between 2 and 5 days post fertilization (dpf), arl13b is expressed in neural tissues while expression of arl13a is downregulated by 2 dpf and restricted to craniofacial structures. These results indicate that arl13a and arl13b have evolved different roles and that arl13a does not function in the zebrafish retina., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BKM6", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005929 cilium;GO:0097730 non-motile cilium;GO:0060170 ciliary membrane", "go_biological_process": "GO:1905515 non-motile cilium assembly;GO:0097500 receptor localization to non-motile cilium", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QKW5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7K0-1", "uniprot_id": "F1R7K0_DANRE", "mass": 35908.0, "length": 325, "protein_name": "Sidoreflexin", "gene_name": "sfxn5b", "organism": "Zebrafish", "refseq_name": "sideroflexin-5b", "refseq_ac": "NP_001025334", "gene_names_uniprotkb": "sfxn5b; wu:fc52e09; zgc:114137", "gene_names_refseq": "sfxn5b; wu:fc52e09; zgc:114137", "protein_names_uniprotkb": "Sidoreflexin", "protein_names_refseq": "sideroflexin-5b", "tax_id": 7955, "disease": "", "pathway": " (dre:561995)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;37326485", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01035099.1, GDQH01022634.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On or before Apr 21, 2018 this sequence version replaced XP_005169671.1, NP_001025334.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BH13", "ec_number_list": "", "go_molecular_function": "GO:0015075 monoatomic ion transmembrane transporter activity;GO:0015137 citrate transmembrane transporter activity", "go_cellular_component": "GO:0031966 mitochondrial membrane;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0006865 amino acid transport;GO:0015746 citrate transport;GO:1990542 mitochondrial transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1R7K0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NI81-1", "uniprot_id": "F6NI81_DANRE", "mass": 38049.0, "length": 337, "protein_name": "Homeobox protein Hox-C10a isoform X1", "gene_name": "hoxc10a", "organism": "Zebrafish", "refseq_name": "homeobox protein Hox-C10a isoform X1", "refseq_ac": "XP_017208987", "gene_names_uniprotkb": "hoxc10a; hoxc10; z-81", "gene_names_refseq": "hoxc10a; hoxc10; z-81", "protein_names_uniprotkb": "Homeobox protein Hox-C10a isoform X1", "protein_names_refseq": "homeobox protein Hox-C10a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100535576)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10801442;11133157;29684203;34096572;35739109;37717409;38861596;8882497;9425136;9831563", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z3M9", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F6NI81-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RD19-1", "uniprot_id": "F1RD19_DANRE", "mass": 82696.0, "length": 729, "protein_name": "Rho-related BTB domain-containing protein 1", "gene_name": "rhobtb4", "organism": "Zebrafish", "refseq_name": "Rho related BTB domain containing 4 isoform 1", "refseq_ac": "NP_001352487", "gene_names_uniprotkb": "rhobtb4; rhobtb2a", "gene_names_refseq": "rhobtb2a; rhobtb4", "protein_names_uniprotkb": "Rho-related BTB domain-containing protein 1", "protein_names_refseq": "Rho related BTB domain containing 4 isoform 1; Rho-related BTB domain containing 2a", "tax_id": 7955, "disease": "", "pathway": " (dre:553415)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15894457;19409617;26469318;33527896;35079792;35134499", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01032649.1, GDQH01016577.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA3505389 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Sep 1, 2018 this sequence version replaced XP_005165369.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BCL5", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0019901 protein kinase binding", "go_cellular_component": "GO:0010008 endosome membrane;GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0031410 cytoplasmic vesicle;GO:0042995 cell projection", "go_biological_process": "GO:0007264 small GTPase-mediated signal transduction;GO:0007015 actin filament organization;GO:0007165 signal transduction;GO:0032956 regulation of actin cytoskeleton organization;GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1RD19-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RCJ6-1", "uniprot_id": "F1RCJ6_DANRE", "mass": 36704.0, "length": 328, "protein_name": "Motor neuron and pancreas homeobox 2b isoform 1", "gene_name": "mnx2b", "organism": "Zebrafish", "refseq_name": "motor neuron and pancreas homeobox 2b isoform 1", "refseq_ac": "NP_001315287", "gene_names_uniprotkb": "mnx2b; hlxb9lb; mnr2b", "gene_names_refseq": "hlxb9lb; mnr2b; mnx2b", "protein_names_uniprotkb": "Motor neuron and pancreas homeobox 2b isoform 1", "protein_names_refseq": "homeo box HB9 like b; motor neuron and pancreas homeobox 2b isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:406206)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "15063174;22128106;23122226;23754985;24046321;28894416;30089266;32081878;38017520", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163315.1, SRR32588735.678473.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476797 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 16, 2016 this sequence version replaced XP_005160343.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Displays homology to the related chicken mnr2., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P904", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0021520 spinal cord motor neuron cell fate specification", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F1RCJ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R4C0-1", "uniprot_id": "F1R4C0_DANRE", "mass": 43542.0, "length": 377, "protein_name": "Src kinase-associated phosphoprotein 1", "gene_name": "skap1", "organism": "Zebrafish", "refseq_name": "src kinase-associated phosphoprotein 1", "refseq_ac": "NP_001073480", "gene_names_uniprotkb": "skap1; zgc:158223", "gene_names_refseq": "skap1; zgc:158223", "protein_names_uniprotkb": "Src kinase-associated phosphoprotein 1; Src family-associated phosphoprotein 2; Src kinase-associated phosphoprotein 2", "protein_names_refseq": "src kinase-associated phosphoprotein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:563784)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "27189481;32094353;32341750;34811400", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588728.17608326.1, SRR32588729.3550700.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Jun 25, 2025 this sequence version replaced NP_001073480.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; May be involved in B-cell and macrophage adhesion processes. May play a role in src signaling pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PWE3", "ec_number_list": "", "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0042113 B cell activation;GO:0002250 adaptive immune response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1R4C0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RDD0-1", "uniprot_id": "F1RDD0_DANRE", "mass": 33607.0, "length": 317, "protein_name": "Pyrroline-5-carboxylate reductase", "gene_name": "pycr1b", "organism": "Zebrafish", "refseq_name": "pyrroline-5-carboxylate reductase 1b", "refseq_ac": "NP_001307354", "gene_names_uniprotkb": "pycr1b; zgc:110655", "gene_names_refseq": "pycr1b; zgc:110655", "protein_names_uniprotkb": "Pyrroline-5-carboxylate reductase; 1.5.1.2", "protein_names_refseq": "pycr2; pyrroline-5-carboxylate reductase 1b", "tax_id": 7955, "disease": "hypomyelinating leukodystrophy 10 (Disease Ontology:DOID:0060788); autosomal recessive cutis laxa type IIB (Disease Ontology:DOID:0070137); autosomal recessive cutis laxa type IIIB (Disease Ontology:DOID:0070138)", "pathway": " (dre:100149838)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "19648921;25865492;28252024;32849832", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395012.184368.1, SRR26395017.182198.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708828, SAMEA708836 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Feb 25, 2016 this sequence version replaced XP_005169477.2. Sequence Note:., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0H2UKQ7;A0A8M1P2F8", "ec_number_list": "1.5.1.2", "go_molecular_function": "GO:0004735 pyrroline-5-carboxylate reductase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0007420 brain development;GO:0034599 cellular response to oxidative stress;GO:0055129 L-proline biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1RDD0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6P8U0-1", "uniprot_id": "F6P8U0_DANRE", "mass": 46289.0, "length": 402, "protein_name": "Dynein regulatory complex subunit 10", "gene_name": "drc10", "organism": "Zebrafish", "refseq_name": "dynein regulatory complex protein 10", "refseq_ac": "NP_001373647", "gene_names_uniprotkb": "drc10; iqcd; si:dkey-125i10.6", "gene_names_refseq": "drc10; iqcd; si:dkey-125i10.6", "protein_names_uniprotkb": "Dynein regulatory complex subunit 10; IQ domain-containing protein D", "protein_names_refseq": "IQ motif containing D; dynein regulatory complex protein 10", "tax_id": 7955, "disease": "", "pathway": " (dre:553445)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095280.1, SRR32588727.1039792.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476819 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Jun 25, 2025 this sequence version replaced NP_001373647.1., [RefSeq]; Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z0R8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F6P8U0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8F3-1", "uniprot_id": "F1R8F3_DANRE", "mass": 69496.0, "length": 619, "protein_name": "Uncharacterized protein si:dkey-34m19.3 isoform X1", "gene_name": "si:dkey-34m19.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-34m19.3 isoform X1", "refseq_ac": "XP_002662346", "gene_names_uniprotkb": "si:dkey-34m19.3", "gene_names_refseq": "si:dkey-34m19.3", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-34m19.3 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-34m19.3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005466)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RH95", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R8F3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAQ3-1", "uniprot_id": "F1RAQ3_DANRE", "mass": 123018.0, "length": 1104, "protein_name": "Transmembrane protein 132C isoform X1", "gene_name": "si:dkeyp-14d3.1", "organism": "Zebrafish", "refseq_name": "transmembrane protein 132C isoform X1", "refseq_ac": "XP_009302406", "gene_names_uniprotkb": "si:dkeyp-14d3.1", "gene_names_refseq": "si:dkeyp-14d3.1", "protein_names_uniprotkb": "Transmembrane protein 132C isoform X1", "protein_names_refseq": "transmembrane protein 132C isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884658)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AVE3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RAQ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RE04-1", "uniprot_id": "F1RE04_DANRE", "mass": 84358.0, "length": 760, "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "trappc12", "organism": "Zebrafish", "refseq_name": "trafficking protein particle complex subunit 12", "refseq_ac": "NP_001074113", "gene_names_uniprotkb": "trappc12; ttc15; zgc:158466", "gene_names_refseq": "trappc12; ttc15; zgc:158466", "protein_names_uniprotkb": "Trafficking protein particle complex subunit 12; Tetratricopeptide repeat protein 15", "protein_names_refseq": "tetratricopeptide repeat domain 15; trafficking protein particle complex 12; trafficking protein particle complex subunit 12", "tax_id": 7955, "disease": "", "pathway": " (dre:791162); (R-DRE-8876198)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;34733844", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588716.36480537.1, SRR26395050.940759.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On or before Aug 3, 2025 this sequence version replaced XP_005169941.2, NP_001074113.3., [RefSeq]; Component of the TRAPP complex, which is involved in endoplasmic reticulum to Golgi apparatus trafficking at a very early stage. Also plays a role in chromosome congression, kinetochore assembly and stability and controls the recruitment of CENPE to the kinetochores., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IDK0;A0A8M1ND00", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005793 endoplasmic reticulum-Golgi intermediate compartment;GO:0005794 Golgi apparatus;GO:0030008 TRAPP complex", "go_biological_process": "GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1RE04-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NI22-1", "uniprot_id": "F6NI22_DANRE", "mass": 37874.0, "length": 337, "protein_name": "Uncharacterized protein LOC796128; Uncharacterized protein isoform X1", "gene_name": "tmem79a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC796128", "refseq_ac": "NP_001103197", "gene_names_uniprotkb": "tmem79a; si:dkey-263h23.4", "gene_names_refseq": "si:dkey-263h23.4; tmem79a", "protein_names_uniprotkb": "Uncharacterized protein LOC796128; Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC796128", "tax_id": 7955, "disease": "atopic dermatitis (Disease Ontology:DOID:3310)", "pathway": " (dre:796128)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01041269.1, GDQQ01017906.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA3505388 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Jun 26, 2024 this sequence version replaced NP_001103197.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B383;A0AC58HZB4;A0AC58HZB6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0032588 trans-Golgi network membrane;GO:0005765 lysosomal membrane", "go_biological_process": "GO:0045055 regulated exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F6NI22-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7L2-1", "uniprot_id": "F1R7L2_DANRE", "mass": 35340.0, "length": 320, "protein_name": "Small glutamine-rich tetratricopeptide repeat-containing protein beta", "gene_name": "sgtb", "organism": "Zebrafish", "refseq_name": "small glutamine-rich tetratricopeptide repeat-containing protein beta", "refseq_ac": "NP_001002225", "gene_names_uniprotkb": "sgtb; zgc:92462", "gene_names_refseq": "sgtb; zgc:92462", "protein_names_uniprotkb": "Small glutamine-rich tetratricopeptide repeat-containing protein beta; Beta-SGT", "protein_names_refseq": "small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta; small glutamine-rich tetratricopeptide repeat-containing protein beta", "tax_id": 7955, "disease": "", "pathway": " (dre:431772)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16109975;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC074059.1, SRR26395039.1984731.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1, EH435811.1, EH446588.1, EH461811.1 and EH472441.1. On or before Jun 16, 2016 this sequence version replaced XP_005155623.1, NP_001002225.1., [RefSeq]; Co-chaperone that binds directly to HSC70 and HSP70 and regulates their ATPase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N099", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding;GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0016020 membrane;GO:0072380 TRC complex", "go_biological_process": "GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R7L2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1REH1-1", "uniprot_id": "F1REH1_DANRE", "mass": 65734.0, "length": 576, "protein_name": "FERM domain-containing protein 5", "gene_name": "frmd5a", "organism": "Zebrafish", "refseq_name": "FERM domain-containing protein 5 isoform X1", "refseq_ac": "XP_699526", "gene_names_uniprotkb": "frmd5a", "gene_names_refseq": "frmd5a", "protein_names_uniprotkb": "FERM domain-containing protein 5", "protein_names_refseq": "FERM domain-containing protein 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:570903)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_699526.2. COMPLETENESS: full length., [RefSeq]; May be involved in regulation of cell migration. May regulate cell-matrix interactions via its interaction with ITGB5 and modifying ITGB5 cytoplasmic tail interactions such as with FERMT2 and TLN1. May regulate ROCK1 kinase activity possibly involved in regulation of actin stress fiber formation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UTH7", "ec_number_list": "", "go_molecular_function": "GO:0008092 cytoskeletal protein binding", "go_cellular_component": "GO:0005912 adherens junction;GO:0005856 cytoskeleton", "go_biological_process": "GO:0031032 actomyosin structure organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1REH1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RDG4-1", "uniprot_id": "F1RDG4_DANRE", "mass": 49990.0, "length": 438, "protein_name": "Keratin, type II cytoskeletal 8 isoform X1", "gene_name": "si:dkey-222f2.1", "organism": "Zebrafish", "refseq_name": "keratin, type II cytoskeletal 8 isoform X1", "refseq_ac": "XP_696736", "gene_names_uniprotkb": "si:dkey-222f2.1", "gene_names_refseq": "si:dkey-222f2.1", "protein_names_uniprotkb": "Keratin, type II cytoskeletal 8 isoform X1", "protein_names_refseq": "keratin, type II cytoskeletal 8 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:568321); (R-DRE-6798695); (R-DRE-6805567); (R-DRE-6809371)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_696736.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TBR8", "ec_number_list": "", "go_molecular_function": "GO:0030280 structural constituent of skin epidermis", "go_cellular_component": "GO:0045095 keratin filament", "go_biological_process": "GO:0031424 keratinization;GO:0045109 intermediate filament organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RDG4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QLP6-1", "uniprot_id": "F1QLP6_DANRE", "mass": 147138.0, "length": 1282, "protein_name": "Serine/arginine repetitive matrix protein 2", "gene_name": "srrm2", "organism": "Zebrafish", "refseq_name": "serine/arginine repetitive matrix protein 2", "refseq_ac": "NP_001025246", "gene_names_uniprotkb": "srrm2; zgc:110023", "gene_names_refseq": "srrm2; zgc:110023", "protein_names_uniprotkb": "Serine/arginine repetitive matrix protein 2", "protein_names_refseq": "serine/arginine repetitive matrix protein 2", "tax_id": 7955, "disease": "autosomal dominant intellectual developmental disorder 72 (Disease Ontology:DOID:0061045); Parkinson's disease (Disease Ontology:DOID:14330)", "pathway": " (dre:553531)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "24240475;26469318;30833759", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003650.1, SRR32588716.4328977.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 3, 2025 this sequence version replaced NP_001025246.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N752;F1QUP6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005681 spliceosomal complex;GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QLP6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R3X3-1", "uniprot_id": "F1R3X3_DANRE", "mass": 115267.0, "length": 1010, "protein_name": "Ras GTPase-activating protein 1", "gene_name": "rasa1a", "organism": "Zebrafish", "refseq_name": "ras GTPase-activating protein 1 isoform X1", "refseq_ac": "XP_009300041", "gene_names_uniprotkb": "rasa1a", "gene_names_refseq": "rasa1a", "protein_names_uniprotkb": "Ras GTPase-activating protein 1; Ras p21 protein activator; p120GAP", "protein_names_refseq": "ras GTPase-activating protein 1 isoform X1", "tax_id": 7955, "disease": "arteriovenous malformation (Disease Ontology:DOID:11294); basal cell carcinoma (Disease Ontology:DOID:2513)", "pathway": " (dre:100002155); (R-DRE-3928662); (R-DRE-5658442); (R-DRE-8849471)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_009300041.1. COMPLETENESS: full length., [RefSeq]; GTPase-activating protein (GAP) that stimulates the intrinsic GTPase activity of Ras proteins, such as NRAS, facilitating their transition from the active GTP-bound state to the inactive GDP-bound state, thereby terminating Ras signaling., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B2S6", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0005102 signaling receptor binding;GO:0019899 enzyme binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0048013 ephrin receptor signaling pathway;GO:0001568 blood vessel development;GO:1902531 regulation of intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R3X3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1REB9-1", "uniprot_id": "F1REB9_DANRE", "mass": 126985.0, "length": 1135, "protein_name": "TATA element modulatory factor", "gene_name": "tmf1", "organism": "Zebrafish", "refseq_name": "TATA element modulatory factor", "refseq_ac": "NP_001003522", "gene_names_uniprotkb": "tmf1; zgc:100899", "gene_names_refseq": "tmf1; zgc:100899", "protein_names_uniprotkb": "TATA element modulatory factor", "protein_names_refseq": "TATA element modulatory factor", "tax_id": 7955, "disease": "", "pathway": " (dre:445128); (R-DRE-6811440)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "22412924;28546340", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01041311.1, GDQQ01009877.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1 and EB929950.1. On Sep 4, 2015 this sequence version replaced NP_001003522.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N1L0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005783 endoplasmic reticulum", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1REB9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NXU9-1", "uniprot_id": "F6NXU9_DANRE", "mass": 390693.0, "length": 3528, "protein_name": "Zinc finger homeobox protein 3", "gene_name": "zfhx4", "organism": "Zebrafish", "refseq_name": "zinc finger homeobox protein 4 isoform X1", "refseq_ac": "XP_005162803", "gene_names_uniprotkb": "zfhx4", "gene_names_refseq": "zfhx4", "protein_names_uniprotkb": "Zinc finger homeobox protein 3; AT motif-binding factor 1; AT-binding transcription factor 1; Alpha-fetoprotein enhancer-binding protein; Zinc finger homeodomain protein 3", "protein_names_refseq": "zinc finger homeobox protein 4 isoform X1", "tax_id": 7955, "disease": "spinocerebellar ataxia 4 (Disease Ontology:DOID:0050957); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:556453)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TAH7", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0006351 DNA-templated transcription;GO:0007517 muscle organ development;GO:0045893 positive regulation of DNA-templated transcription;GO:0001755 neural crest cell migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F6NXU9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R1P2-1", "uniprot_id": "F1R1P2_DANRE", "mass": 60667.0, "length": 536, "protein_name": "glucuronosyltransferase", "gene_name": "ugt1a1; ugt1a2; ugt1a6; ugt1ab", "organism": "Zebrafish", "refseq_name": "UDP glucuronosyltransferase 1 family a, b precursor", "refseq_ac": "NP_998587", "gene_names_uniprotkb": "ugt1a1; ugt1a2; ugt1a6; ugt1ab; Ugt1a3; zgc:123097; zgc:66393", "gene_names_refseq": "Ugt1a3; ugt1ab; zgc:123097; zgc:66393", "protein_names_uniprotkb": "glucuronosyltransferase; 2.4.1.17", "protein_names_refseq": "UDP glucuronosyltransferase 1 family a, b precursor; UDP glucuronosyltransferase 1 family polypeptide a3", "tax_id": 7955, "disease": "", "pathway": " (dre:100379286); (dre:100384896); (dre:406731); (dre:641488)", "pathway_count": 4, "publication_count": 8, "publication_id_list": "17475008;17686537;20161780;20415643;24667232;24728488;32563064;33872729", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055635.1, GFIL01042679.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Jun 25, 2025 this sequence version replaced NP_998587.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1Z2E2", "ec_number_list": "2.4.1.17", "go_molecular_function": "GO:0015020 glucuronosyltransferase activity;GO:0008194 UDP-glycosyltransferase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1R1P2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QL35-1", "uniprot_id": "F1QL35_DANRE", "mass": 129952.0, "length": 1171, "protein_name": "Thrombospondin-1", "gene_name": "thbs1b", "organism": "Zebrafish", "refseq_name": "thrombospondin-1 isoform X1", "refseq_ac": "XP_005160819", "gene_names_uniprotkb": "thbs1b", "gene_names_refseq": "thbs1b", "protein_names_uniprotkb": "Thrombospondin-1; Glycoprotein G", "protein_names_refseq": "thrombospondin-1 isoform X1", "tax_id": 7955, "disease": "COVID-19 (Disease Ontology:DOID:0080600); primary open angle glaucoma (Disease Ontology:DOID:1070); urinary bladder cancer (Disease Ontology:DOID:11054); Sjogren's syndrome (Disease Ontology:DOID:12894); pancreatic cancer (Disease Ontology:DOID:1793); pancreatic ductal carcinoma (Disease Ontology:DOID:3587); cholangiocarcinoma (Disease Ontology:DOID:4947); colorectal cancer (Disease Ontology:DOID:9256); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:561901); (R-DRE-114608); (R-DRE-186797); (R-DRE-216083); (R-DRE-5173214)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 9, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B7Q1", "ec_number_list": "", "go_molecular_function": "GO:0008201 heparin binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0009986 cell surface;GO:0016529 sarcoplasmic reticulum;GO:0031012 extracellular matrix", "go_biological_process": "GO:0007155 cell adhesion;GO:0016525 negative regulation of angiogenesis;GO:0006986 response to unfolded protein", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QL35-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0K1-1", "uniprot_id": "F1R0K1_DANRE", "mass": 48150.0, "length": 443, "protein_name": "ETS domain-containing protein Elk-4 isoform 1", "gene_name": "elk4", "organism": "Zebrafish", "refseq_name": "ETS domain-containing protein Elk-4 isoform 1", "refseq_ac": "NP_571005", "gene_names_uniprotkb": "elk4; TCF-1; tcf", "gene_names_refseq": "TCF-1; elk4; tcf", "protein_names_uniprotkb": "ETS domain-containing protein Elk-4 isoform 1", "protein_names_refseq": "ELK4, ETS-domain protein; ETS domain-containing protein Elk-4 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:30093)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10637509;18832752;23830865;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AJ249170.1, SRR32588733.2307798.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On May 19, 2015 this sequence version replaced NP_571005.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1TTL1", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1R0K1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QHC4-1", "uniprot_id": "F1QHC4_DANRE", "mass": 66733.0, "length": 588, "protein_name": "Lamin-B1 isoform X1", "gene_name": "lmnb1", "organism": "Zebrafish", "refseq_name": "lamin-B1 isoform X1", "refseq_ac": "XP_005155613", "gene_names_uniprotkb": "lmnb1; fc06g01; wu:fc06g01", "gene_names_refseq": "fc06g01; lmnb1; wu:fc06g01", "protein_names_uniprotkb": "Lamin-B1 isoform X1", "protein_names_refseq": "lamin-B1 isoform X1", "tax_id": 7955, "disease": "congenital muscular dystrophy (Disease Ontology:DOID:0050557); autosomal dominant primary microcephaly 26 (Disease Ontology:DOID:0051037); typical adult-onset autosomal dominant demyelinating leukodystrophy (Disease Ontology:DOID:0060785); familial partial lipodystrophy type 2 (Disease Ontology:DOID:0070202); autosomal dominant Emery-Dreifuss muscular dystrophy 2 (Disease Ontology:DOID:0070247); autosomal recessive Emery-Dreifuss muscular dystrophy 3 (Disease Ontology:DOID:0070248); dilated cardiomyopathy 1A (Disease Ontology:DOID:0110425); congenital muscular dystrophy due to LMNA mutation (Disease Ontology:DOID:0110640); Emery-Dreifuss muscular dystrophy (Disease Ontology:DOID:11726); progeria (Disease Ontology:DOID:3911); myopathy (Disease Ontology:DOID:423); muscular dystrophy (Disease Ontology:DOID:9884)", "pathway": " (R-DRE-352238); (R-DRE-4419969); (R-DRE-9035034)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 12, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B213;A0AC58GIK1", "ec_number_list": "", "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton", "go_cellular_component": "GO:0005882 intermediate filament;GO:0005652 nuclear lamina", "go_biological_process": "GO:0090435 protein localization to nuclear envelope;GO:0006998 nuclear envelope organization;GO:0031507 heterochromatin formation;GO:0007097 nuclear migration;GO:0051664 nuclear pore localization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QHC4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QHN6-1", "uniprot_id": "F1QHN6_DANRE", "mass": 59974.0, "length": 533, "protein_name": "Polyubiquitin-C", "gene_name": "ubc", "organism": "Zebrafish", "refseq_name": "polyubiquitin-C", "refseq_ac": "NP_001071272", "gene_names_uniprotkb": "ubc; im:7042025; wu:fb37h06; zgc:153686", "gene_names_refseq": "im:7042025; ubc; wu:fb37h06; zgc:153686", "protein_names_uniprotkb": "Polyubiquitin-C", "protein_names_refseq": "polyubiquitin-C", "tax_id": 7955, "disease": "", "pathway": " (dre:777766); (R-DRE-110312); (R-DRE-110314); (R-DRE-110320); (R-DRE-1169091); (R-DRE-1234176); (R-DRE-1253288); (R-DRE-1295596); (R-DRE-1358803); (R-DRE-156827); (R-DRE-168638); (R-DRE-174048); (R-DRE-174084); (R-DRE-174113); (R-DRE-174154); (R-DRE-174178); (R-DRE-174184); (R-DRE-179409); (R-DRE-1799339); (R-DRE-182971); (R-DRE-187577); (R-DRE-195253); (R-DRE-209543); (R-DRE-209560); (R-DRE-2122948); (R-DRE-2173788); (R-DRE-2173791); (R-DRE-2173795); (R-DRE-2173796); (R-DRE-2467813); (R-DRE-2559580); (R-DRE-2559582); (R-DRE-2559585); (R-DRE-2565942); (R-DRE-3134975); (R-DRE-349425); (R-DRE-3769402); (R-DRE-382556); (R-DRE-445989); (R-DRE-450302); (R-DRE-450321); (R-DRE-450408); (R-DRE-4608870); (R-DRE-4641257); (R-DRE-4641258); (R-DRE-4641263); (R-DRE-5205685); (R-DRE-532668); (R-DRE-5357905); (R-DRE-5357956); (R-DRE-5358346); (R-DRE-5610780); (R-DRE-5610785); (R-DRE-5632684); (R-DRE-5654726); (R-DRE-5654727); (R-DRE-5654732); (R-DRE-5654733); (R-DRE-5655862); (R-DRE-5656121); (R-DRE-5656169); (R-DRE-5658442); (R-DRE-5668541); (R-DRE-5675221); (R-DRE-5675482); (R-DRE-5684264); (R-DRE-5685942); (R-DRE-5687128); (R-DRE-5689603); (R-DRE-5689877); (R-DRE-5689880); (R-DRE-5689896); (R-DRE-5689901); (R-DRE-5693537); (R-DRE-5693565); (R-DRE-5696394); (R-DRE-5696395); (R-DRE-5696397); (R-DRE-5696400); (R-DRE-6781823); (R-DRE-6782135); (R-DRE-6782210); (R-DRE-6783310); (R-DRE-6791226); (R-DRE-6804756); (R-DRE-6804757); (R-DRE-6807004); (R-DRE-68867); (R-DRE-68949); (R-DRE-69017); (R-DRE-69231); (R-DRE-69481); (R-DRE-69541); (R-DRE-69601); (R-DRE-72689); (R-DRE-75815); (R-DRE-8849469); (R-DRE-8852276); (R-DRE-8854050); (R-DRE-8863795); (R-DRE-8866652); (R-DRE-8866654); (R-DRE-8939236); (R-DRE-8939902); (R-DRE-8941858); (R-DRE-8948747); (R-DRE-8948751); (R-DRE-8951664); (R-DRE-901032); (R-DRE-9020702); (R-DRE-9033241); (R-DRE-909733); (R-DRE-912631); (R-DRE-917729); (R-DRE-917937); (R-DRE-937039); (R-DRE-937042); (R-DRE-937072); (R-DRE-9646399); (R-DRE-9648002); (R-DRE-975144); (R-DRE-975163); (R-DRE-9755511); (R-DRE-975956); (R-DRE-975957); (R-DRE-9762114); (R-DRE-9766229); (R-DRE-9770562); (R-DRE-9824878); (R-DRE-983168); (R-DRE-9861718); (R-DRE-9929491); (R-DRE-9931269); (R-DRE-9932298); (R-DRE-9954709); (R-DRE-9954714); (R-DRE-9954716); (R-DRE-9958810); (R-DRE-9958825)", "pathway_count": 139, "publication_count": 10, "publication_id_list": "24714733;25628360;26635538;27189481;27499523;32054973;32697972;33589679;35134494;36274083", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC127395.1, SRR26395017.212505.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Feb 23, 2011 this sequence version replaced NP_001071272.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAS3", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome;GO:0031386 protein tag activity", "go_cellular_component": "GO:0005634 nucleus;GO:0022626 cytosolic ribosome", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0019941 modification-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QHN6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QHT3-1", "uniprot_id": "F1QHT3_DANRE", "mass": 67099.0, "length": 584, "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1", "gene_name": "pigq", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1", "refseq_ac": "XP_005163963", "gene_names_uniprotkb": "pigq; cb359; sb:cb359; wu:fa03b07; zgc:64027", "gene_names_refseq": "cb359; pigq; sb:cb359; wu:fa03b07; zgc:64027", "protein_names_uniprotkb": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1", "protein_names_refseq": "phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1", "tax_id": 7955, "disease": "multiple congenital anomalies-hypotonia-seizures syndrome 4 (Disease Ontology:DOID:0112213)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BBF0;A0AC58IDC5", "ec_number_list": "", "go_molecular_function": "GO:0016757 glycosyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0006506 GPI anchor biosynthetic process;GO:0042749 regulation of circadian sleep/wake cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QHT3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QHU6-1", "uniprot_id": "F1QHU6_DANRE", "mass": 61140.0, "length": 544, "protein_name": "Palmitoyltransferase", "gene_name": "si:ch211-223a10.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-223a10.1 isoform X1", "refseq_ac": "XP_009305694", "gene_names_uniprotkb": "si:ch211-223a10.1", "gene_names_refseq": "si:ch211-223a10.1", "protein_names_uniprotkb": "Palmitoyltransferase; 2.3.1.225", "protein_names_refseq": "uncharacterized protein si:ch211-223a10.1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884554)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AZB1", "ec_number_list": "2.3.1.225;2.3.1.-", "go_molecular_function": "GO:0019706 protein-cysteine S-palmitoyltransferase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QHU6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QI16-1", "uniprot_id": "F1QI16_DANRE", "mass": 24444.0, "length": 215, "protein_name": "Calcium-binding protein 7", "gene_name": "cabp7a", "organism": "Zebrafish", "refseq_name": "calcium-binding protein 7", "refseq_ac": "XP_017211721", "gene_names_uniprotkb": "cabp7a", "gene_names_refseq": "cabp7a", "protein_names_uniprotkb": "Calcium-binding protein 7", "protein_names_refseq": "calcium-binding protein 7", "tax_id": 7955, "disease": "", "pathway": " (dre:100329495)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YYC8", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0032588 trans-Golgi network membrane;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QI16-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QI79-1", "uniprot_id": "F1QI79_DANRE", "mass": 45510.0, "length": 411, "protein_name": "Golgi membrane protein 1", "gene_name": "golm1", "organism": "Zebrafish", "refseq_name": "Golgi membrane protein 1", "refseq_ac": "NP_956573", "gene_names_uniprotkb": "golm1; zgc:56525; zgc:77193", "gene_names_refseq": "golm1; zgc:56525; zgc:77193", "protein_names_uniprotkb": "Golgi membrane protein 1", "protein_names_refseq": "Golgi membrane protein 1-like; Golgi membrane protein 1", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); osteoporosis (Disease Ontology:DOID:11476); hepatitis (Disease Ontology:DOID:2237); liver cirrhosis (Disease Ontology:DOID:5082); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:393249); (R-DRE-381426); (R-DRE-8957275)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "22729936;26469318;27189481;28252024;28265462", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01047018.1, SRR26395012.1113540.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH488804.1, JBMGRA010000008.1 and EH477845.1. On Jul 14, 2011 this sequence version replaced NP_956573.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PEA0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0048545 response to steroid hormone", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QI79-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QI87-1", "uniprot_id": "F1QI87_DANRE", "mass": 228431.0, "length": 2055, "protein_name": "GON-4-like protein", "gene_name": "gon4lb", "organism": "Zebrafish", "refseq_name": "GON-4-like protein", "refseq_ac": "NP_001188464", "gene_names_uniprotkb": "gon4lb; fb99g07; gon4l; udu; wu:fb99g07", "gene_names_refseq": "fb99g07; gon4lb; gon4l; udu; wu:fb99g07", "protein_names_uniprotkb": "GON-4-like protein; GON-4 homolog", "protein_names_refseq": "GON-4-like protein; gon-4-like; ugly duckling", "tax_id": 7955, "disease": "salivary gland cancer (Disease Ontology:DOID:8850)", "pathway": " (dre:555764)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "17369489;19656853;21454521;26469318;27189481;29615614;32272116;32848183;39500882;9007236", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EF494072.1, GFIL01011763.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jan 26, 2011 this sequence version replaced XP_001922693.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Acts as a key transcription regulator of histones. Activates transcription of the histone H2A, histone H2B, histone H3 and histone H4 genes in conjunction with GON4L and MIZF. Together with CRAMP1, binds to the promoters of H1 genes (H1-2, H1-3, H1-4, H1-5 and H1-10/H1x), driving their transcription. Also acts as a transcription corepressor, as part of a complex with YY1, SIN3A and HDAC1. Required for B-cell lymphopoiesis., [UniProtKB, UniProtKB, UniProtKB]; Data show that Udu is colocalized with 5-bromo-2'-deoxyuridine and heterochromatin during DNA replication, suggesting a role in maintaining genome integrity., [RefSeq, PubMed]; Gon4l cooperates with planar cell polarity signaling to coordinate morphogenesis along the anterioposterior embryonic axis Publication Status: Online-Only, [RefSeq, PubMed]; Gon4l/Udu regulates cardiomyocyte proliferation and maintenance of ventricular chamber identity during zebrafish development., [RefSeq, PubMed]; Newly identified Gon4l/Udu-interacting proteins implicate novel functions. Publication Status: Online-Only, [RefSeq, PubMed]; The Udu protein (ugly duckling (Udu) mutant allele) is very likely to function as a transcription modulator essential for the proliferation and differentiation of erythroid lineage., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2G5", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0048570 notochord morphogenesis;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0061371 determination of heart left/right asymmetry", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QI87-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QI96-1", "uniprot_id": "F1QI96_DANRE", "mass": 26892.0, "length": 235, "protein_name": "Zinc finger CCHC domain-containing protein 17", "gene_name": "zcchc17", "organism": "Zebrafish", "refseq_name": "zinc finger CCHC domain-containing protein 17", "refseq_ac": "NP_956838", "gene_names_uniprotkb": "zcchc17; ps1d; zgc:65790; zgc:85656", "gene_names_refseq": "ps1d; zcchc17; zgc:65790; zgc:85656", "protein_names_uniprotkb": "Zinc finger CCHC domain-containing protein 17; Nucleolar protein of 40 kDa; Putative S1 RNA-binding domain protein", "protein_names_refseq": "putative S1 RNA binding domain protein; zinc finger CCHC domain-containing protein 17", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056336.1, SRR32588730.1220494.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB846118.1, EH505718.1 and JBMGRA010000019.1. On Mar 13, 2014 this sequence version replaced NP_956838.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHD3;A0AC58HXN2", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005730 nucleolus;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0043489 RNA stabilization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QI96-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QIB2-1", "uniprot_id": "F1QIB2_DANRE", "mass": 82789.0, "length": 716, "protein_name": "Cleavage stimulation factor subunit 3", "gene_name": "cstf3", "organism": "Zebrafish", "refseq_name": "cleavage stimulation factor subunit 3", "refseq_ac": "NP_998218", "gene_names_uniprotkb": "cstf3; wu:fa99c02; wu:fb18b09; zgc:56028", "gene_names_refseq": "cstf3; wu:fa99c02; wu:fb18b09; zgc:56028", "protein_names_uniprotkb": "Cleavage stimulation factor subunit 3; CF-1 77 kDa subunit; Cleavage stimulation factor 77 kDa subunit", "protein_names_refseq": "cleavage stimulation factor subunit 3", "tax_id": 7955, "disease": "", "pathway": " (dre:406326); (R-DRE-73856); (R-DRE-77595); (R-DRE-9770562)", "pathway_count": 4, "publication_count": 9, "publication_id_list": "15256591;18307296;18992736;20603019;24951566;26469318;27189481;27880902;34671088", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045871.1, BC165650.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB848641.1, EH433088.1, BC045871.1, DT871999.1 and EH459092.1. On or before Jun 13, 2012 this sequence version replaced NP_999884.1, NP_998218.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; One of the multiple factors required for polyadenylation and 3'-end cleavage of mammalian pre-mRNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PEH9", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0031124 mRNA 3'-end processing;GO:0031123 RNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F1QIB2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QIE2-1", "uniprot_id": "F1QIE2_DANRE", "mass": 60847.0, "length": 545, "protein_name": "MARVEL domain-containing protein 2", "gene_name": "marveld2a", "organism": "Zebrafish", "refseq_name": "MARVEL domain-containing protein 2", "refseq_ac": "XP_005155591", "gene_names_uniprotkb": "marveld2a", "gene_names_refseq": "marveld2a", "protein_names_uniprotkb": "MARVEL domain-containing protein 2", "protein_names_refseq": "MARVEL domain-containing protein 2", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 49 (Disease Ontology:DOID:0110506)", "pathway": " (dre:558720)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B2E4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005923 bicellular tight junction;GO:0016324 apical plasma membrane;GO:0031410 cytoplasmic vesicle", "go_biological_process": "GO:0070830 bicellular tight junction assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QIE2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QIP7-1", "uniprot_id": "F1QIP7_DANRE", "mass": 8757.0, "length": 79, "protein_name": "Hematopoietic cell signal transducer", "gene_name": "hcst", "organism": "Zebrafish", "refseq_name": "hematopoietic cell signal transducer", "refseq_ac": "NP_001093572", "gene_names_uniprotkb": "hcst; dap10", "gene_names_refseq": "dap10; hcst", "protein_names_uniprotkb": "Hematopoietic cell signal transducer; DNAX-activation protein 10; Membrane protein DAP10", "protein_names_refseq": "hematopoietic cell signal transducer", "tax_id": 7955, "disease": "", "pathway": " (dre:100101460)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "17719728;17891481;26469318;30765415", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH454362.1, CK236309.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505391 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1 and EH454362.1. On Feb 8, 2014 this sequence version replaced NP_001093572.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; The structure of the adaptor protein dap10 has been identified in the zebrafish genome., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NE56", "ec_number_list": "", "go_molecular_function": "GO:0005102 signaling receptor binding;GO:0043548 phosphatidylinositol 3-kinase binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0051897 positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction;GO:0050776 regulation of immune response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QIP7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QIS4-1", "uniprot_id": "F1QIS4_DANRE", "mass": 49625.0, "length": 444, "protein_name": "Gastrin/cholecystokinin type B receptor", "gene_name": "cckbra", "organism": "Zebrafish", "refseq_name": "Cholecystokinin receptor-like", "refseq_ac": "NP_001108186", "gene_names_uniprotkb": "cckbra; si:ch211-159j13.2; si:dkey-1h24.2", "gene_names_refseq": "cckbra; si:ch211-159j13.2; si:dkey-1h24.2", "protein_names_uniprotkb": "Gastrin/cholecystokinin type B receptor; Cholecystokinin-2 receptor", "protein_names_refseq": "Cholecystokinin receptor-like", "tax_id": 7955, "disease": "pancreatic cancer (Disease Ontology:DOID:1793); pancreatic ductal carcinoma (Disease Ontology:DOID:3587); panic disorder (Disease Ontology:DOID:594)", "pathway": " (dre:100137117)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC153965.1, GDQH01030948.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC153965.1 and JBMGRA010000001.1. On Oct 1, 2011 this sequence version replaced NP_001108186.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Receptor for the peptide hormones gastrin and cholecystokinin (CCK). Expressed throughout the central nervous system, where it modulates processes such as anxiety, analgesia, arousal and neuroleptic activity. Couples to both GNAI1 and GNAQ signaling pathways, but not to GNAS. Upon gastrin activation, reduces glucose absorption in intestinal epithelial cells by downregulating SGLT1 and GLUT2 expression through suppression of the PI3K/Akt/eIF4B pathway. In the kidney, decreases SGLT2 expression under high-glucose conditions via ERK/NF-kappa-B signaling., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFU1", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0015054 gastrin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QIS4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QIV7-1", "uniprot_id": "F1QIV7_DANRE", "mass": 56983.0, "length": 493, "protein_name": "Spermatogenesis-associated protein 7", "gene_name": "spata7", "organism": "Zebrafish", "refseq_name": "spermatogenesis-associated protein 7", "refseq_ac": "XP_003200342", "gene_names_uniprotkb": "spata7", "gene_names_refseq": "spata7", "protein_names_uniprotkb": "Spermatogenesis-associated protein 7", "protein_names_refseq": "spermatogenesis-associated protein 7", "tax_id": 7955, "disease": "Leber congenital amaurosis 3 (Disease Ontology:DOID:0110331)", "pathway": " (dre:793830)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_003200342.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RJ64", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005930 axoneme;GO:0036064 ciliary basal body;GO:0120206 photoreceptor distal connecting cilium;GO:0120200 rod photoreceptor outer segment", "go_biological_process": "GO:0045494 photoreceptor cell maintenance;GO:0000226 microtubule cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QIV7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJ13-1", "uniprot_id": "F1QJ13_DANRE", "mass": 87303.0, "length": 769, "protein_name": "Phosphoinositide phospholipase C", "gene_name": "plcd3b", "organism": "Zebrafish", "refseq_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3-A-like isoform X1", "refseq_ac": "XP_005156186", "gene_names_uniprotkb": "plcd3b", "gene_names_refseq": "plcd3b", "protein_names_uniprotkb": "Phosphoinositide phospholipase C; 3.1.4.11", "protein_names_refseq": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3-A-like isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B2T4;A0AC58GXF6;A0AC58GXF7", "ec_number_list": "3.1.4.11", "go_molecular_function": "GO:0004435 phosphatidylinositol-4,5-bisphosphate phospholipase C activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QJ13-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJ20-1", "uniprot_id": "F1QJ20_DANRE", "mass": 34668.0, "length": 306, "protein_name": "rRNA adenine N(6)-methyltransferase", "gene_name": "dimt1l", "organism": "Zebrafish", "refseq_name": "dimethyladenosine transferase", "refseq_ac": "NP_001003556", "gene_names_uniprotkb": "dimt1l; wu:fc96g04; zgc:101122", "gene_names_refseq": "dimt1l; wu:fc96g04; zgc:101122", "protein_names_uniprotkb": "rRNA adenine N(6)-methyltransferase; 2.1.1.-", "protein_names_refseq": "dimethyladenosine transferase", "tax_id": 7955, "disease": "", "pathway": " (dre:445162)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "22829145;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01008645.1, SRR32588718.11119635.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On or before Feb 23, 2016 this sequence version replaced XP_005166884.1, NP_001003556.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by partial transcript alignments and orthologous alignments., [RefSeq]; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle. Involved in the pre-rRNA processing steps leading to small-subunit rRNA production independently of its RNA-modifying catalytic activity. Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N1K3", "ec_number_list": "2.1.1.-", "go_molecular_function": "GO:0003723 RNA binding;GO:0052909 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity;GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005730 nucleolus", "go_biological_process": "GO:0031167 rRNA methylation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QJ20-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJ72-1", "uniprot_id": "F1QJ72_DANRE", "mass": 33389.0, "length": 303, "protein_name": "Meteorin precursor", "gene_name": "metrn", "organism": "Zebrafish", "refseq_name": "meteorin precursor", "refseq_ac": "NP_001009983", "gene_names_uniprotkb": "metrn; mtrn; wu:fb81a08; zgc:92132", "gene_names_refseq": "metrn; mtrn; wu:fb81a08; zgc:92132", "protein_names_uniprotkb": "Meteorin precursor", "protein_names_refseq": "meteorin precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:494493)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16109975;27189481;34793438;35150283", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC088383.1, GFIL01026246.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA4476758 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Jun 25, 2025 this sequence version replaced NP_001009983.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N3X3", "ec_number_list": "", "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0050772 positive regulation of axonogenesis;GO:0010001 glial cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QJ72-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJ79-1", "uniprot_id": "F1QJ79_DANRE", "mass": 237767.0, "length": 2090, "protein_name": "Dedicator of cytokinesis protein 8 isoform X1", "gene_name": "dock8", "organism": "Zebrafish", "refseq_name": "dedicator of cytokinesis protein 8 isoform X1", "refseq_ac": "XP_001920107", "gene_names_uniprotkb": "dock8", "gene_names_refseq": "dock8", "protein_names_uniprotkb": "Dedicator of cytokinesis protein 8 isoform X1", "protein_names_refseq": "dedicator of cytokinesis protein 8 isoform X1", "tax_id": 7955, "disease": "hyper IgE recurrent infection syndrome 2 (Disease Ontology:DOID:0080594); immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome (Disease Ontology:DOID:0090110); bacterial infectious disease (Disease Ontology:DOID:104); hepatitis B (Disease Ontology:DOID:2043); atopic dermatitis (Disease Ontology:DOID:3310); viral infectious disease (Disease Ontology:DOID:934)", "pathway": " (dre:403040); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013409); (R-DRE-983231)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001920107.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QQN3", "ec_number_list": "", "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0031252 cell leading edge", "go_biological_process": "GO:1903905 positive regulation of establishment of T cell polarity;GO:2000406 positive regulation of T cell migration;GO:0007264 small GTPase-mediated signal transduction;GO:0035023 regulation of Rho protein signal transduction;GO:1904124 microglial cell migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QJ79-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJB5-1", "uniprot_id": "F1QJB5_DANRE", "mass": 59294.0, "length": 524, "protein_name": "Bridging integrator 2b isoform X1", "gene_name": "bin2b", "organism": "Zebrafish", "refseq_name": "bridging integrator 2b isoform X1", "refseq_ac": "XP_005166068", "gene_names_uniprotkb": "bin2b; BIN2; bin2l; wu:fi05e01; zgc:55758", "gene_names_refseq": "BIN2; bin2b; bin2l; wu:fi05e01; zgc:55758", "protein_names_uniprotkb": "Bridging integrator 2b isoform X1", "protein_names_refseq": "bridging integrator 2b isoform X1", "tax_id": 7955, "disease": "centronuclear myopathy 2 (Disease Ontology:DOID:0111220)", "pathway": " (R-DRE-6798695)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BDB7;A0AC58JQE5;A0AC58JQE6;A0AC58JQF1", "ec_number_list": "", "go_molecular_function": "GO:0005543 phospholipid binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0012505 endomembrane system;GO:0002102 podosome", "go_biological_process": "GO:0006911 phagocytosis, engulfment;GO:0071800 podosome assembly;GO:0097320 plasma membrane tubulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QJB5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJC8-1", "uniprot_id": "F1QJC8_DANRE", "mass": 39461.0, "length": 350, "protein_name": "Tubulin-specific chaperone C", "gene_name": "tbcc", "organism": "Zebrafish", "refseq_name": "tubulin-specific chaperone C", "refseq_ac": "NP_001243177", "gene_names_uniprotkb": "tbcc; im:7137439; tbccl", "gene_names_refseq": "im:7137439; tbccl; tbcc", "protein_names_uniprotkb": "Tubulin-specific chaperone C; Tubulin-folding cofactor C", "protein_names_refseq": "tubulin-specific chaperone C; tubulin-specific chaperone c-like", "tax_id": 7955, "disease": "", "pathway": " (dre:553378)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "Tubulin-folding protein; involved in the final step of the tubulin folding pathway., [UniProtKB, UniProtKB]; VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH552995.1 and EH518082.1. On Jan 15, 2012 this sequence version replaced XP_001922489.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2I5", "ec_number_list": "", "go_molecular_function": "GO:0015631 tubulin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006457 protein folding;GO:0007021 tubulin complex assembly;GO:0007023 post-chaperonin tubulin folding pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1QJC8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJE0-1", "uniprot_id": "F1QJE0_DANRE", "mass": 49189.0, "length": 460, "protein_name": "Ubiquinol-cytochrome c reductase core protein 2a", "gene_name": "uqcrc2a", "organism": "Zebrafish", "refseq_name": "ubiquinol-cytochrome c reductase core protein 2a", "refseq_ac": "NP_001002657", "gene_names_uniprotkb": "uqcrc2a; fb33d01; fc43c05; wu:fb33d01; wu:fc43c05; zgc:92453", "gene_names_refseq": "fb33d01; fc43c05; uqcrc2a; wu:fb33d01; wu:fc43c05; zgc:92453", "protein_names_uniprotkb": "Ubiquinol-cytochrome c reductase core protein 2a", "protein_names_refseq": "ubiquinol-cytochrome c reductase core protein 2a; ubiquinol-cytochrome c reductase core protein IIa", "tax_id": 7955, "disease": "mitochondrial complex III deficiency nuclear type 5 (Disease Ontology:DOID:0080114)", "pathway": " (dre:436930)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "18971206;26469318;28252024;31053140;31078959;31726584;33548715", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076480.1, GDQH01002876.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jul 15, 2011 this sequence version replaced NP_001002657.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0Y0", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0045275 respiratory chain complex III", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1QJE0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJJ9-1", "uniprot_id": "F1QJJ9_DANRE", "mass": 42405.0, "length": 375, "protein_name": "Adiponectin receptor protein 1a", "gene_name": "adipor1a", "organism": "Zebrafish", "refseq_name": "adiponectin receptor protein 1a", "refseq_ac": "NP_001314683", "gene_names_uniprotkb": "adipor1a; adipor1; zgc:92893", "gene_names_refseq": "adipor1a; adipor1; zgc:92893", "protein_names_uniprotkb": "Adiponectin receptor protein 1a", "protein_names_refseq": "adiponectin receptor protein 1a", "tax_id": 7955, "disease": "breast cancer (Disease Ontology:DOID:1612); hyperinsulinism (Disease Ontology:DOID:2018); prostate adenocarcinoma (Disease Ontology:DOID:2526); hyperglycemia (Disease Ontology:DOID:4195); macular degeneration (Disease Ontology:DOID:4448); end stage renal disease (Disease Ontology:DOID:783); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:436740); (R-DRE-163680)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "18489000;19240133;22422859;22623957;23760954;29687170;30843204;31042481;34523534;34771727", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395028.183502.1, GDQH01008597.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708828, SAMEA708836 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On May 25, 2016 this sequence version replaced XP_005169341.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Adiponectin and adiponectin receptor genes are coexpressed during zebrafish embryogenesis and regulated by food deprivation, [RefSeq, PubMed]; Expression of adiponectin receptors in the brain of adult zebrafish and mouse: Links with neurogenic niches and brain repair., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P991", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0033211 adiponectin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QJJ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJK1-1", "uniprot_id": "F1QJK1_DANRE", "mass": 83065.0, "length": 732, "protein_name": "Centromere protein I", "gene_name": "cenpi", "organism": "Zebrafish", "refseq_name": "centromere protein I", "refseq_ac": "NP_001373179", "gene_names_uniprotkb": "cenpi; fi32d01; im:7159077; wu:fi32d01", "gene_names_refseq": "cenpi; fi32d01; im:7159077; wu:fi32d01", "protein_names_uniprotkb": "Centromere protein I", "protein_names_refseq": "centromere protein I", "tax_id": 7955, "disease": "", "pathway": " (dre:558570); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124356.1, GDQQ01045624.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Jun 25, 2025 this sequence version replaced NP_001373179.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QKH6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000939 inner kinetochore;GO:0005634 nucleus", "go_biological_process": "GO:0034080 CENP-A containing chromatin assembly;GO:0000070 mitotic sister chromatid segregation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QJK1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJL0-1", "uniprot_id": "F1QJL0_DANRE", "mass": 53537.0, "length": 480, "protein_name": "chitinase", "gene_name": "chia.6", "organism": "Zebrafish", "refseq_name": "chitinase, acidic.6 precursor", "refseq_ac": "NP_955897", "gene_names_uniprotkb": "chia.6; wu:fb60f06; zgc:65788", "gene_names_refseq": "chia.6; wu:fb60f06; zgc:65788", "protein_names_uniprotkb": "chitinase; 3.2.1.14", "protein_names_refseq": "chitinase, acidic.6 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:322420)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "21676242;23335748;24418193;25139857;29589997;29912648;32806454;35315333", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056337.1, SRR32588722.39616646.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1, EH449168.1 and CN509615.1. On Jul 14, 2011 this sequence version replaced NP_955897.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9S1", "ec_number_list": "", "go_molecular_function": "GO:0008843 endochitinase activity;GO:0008061 chitin binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0000272 polysaccharide catabolic process;GO:0006032 chitin catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1QJL0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJL2-1", "uniprot_id": "F1QJL2_DANRE", "mass": 33085.0, "length": 291, "protein_name": "tRNA pseudouridine synthase", "gene_name": "pusl1", "organism": "Zebrafish", "refseq_name": "tRNA pseudouridine synthase-like 1 isoform X1", "refseq_ac": "XP_683563", "gene_names_uniprotkb": "pusl1", "gene_names_refseq": "pusl1", "protein_names_uniprotkb": "tRNA pseudouridine synthase; 5.4.99.12", "protein_names_refseq": "tRNA pseudouridine synthase-like 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_683563.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TE54", "ec_number_list": "5.4.99.12;5.4.99.-", "go_molecular_function": "GO:0003723 RNA binding;GO:0009982 pseudouridine synthase activity;GO:0160147 tRNA pseudouridine(38-40) synthase activity", "go_cellular_component": "", "go_biological_process": "GO:0031119 tRNA pseudouridine synthesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QJL2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJP9-1", "uniprot_id": "F1QJP9_DANRE", "mass": 47644.0, "length": 418, "protein_name": "RNA exonuclease 4", "gene_name": "rexo4", "organism": "Zebrafish", "refseq_name": "RNA exonuclease 4", "refseq_ac": "XP_002665913", "gene_names_uniprotkb": "rexo4", "gene_names_refseq": "rexo4", "protein_names_uniprotkb": "RNA exonuclease 4", "protein_names_refseq": "RNA exonuclease 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100333127)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RL09", "ec_number_list": "", "go_molecular_function": "GO:0003676 nucleic acid binding;GO:0008408 3'-5' exonuclease activity;GO:0004527 exonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006396 RNA processing;GO:0006364 rRNA processing;GO:0006308 DNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QJP9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJR8-1", "uniprot_id": "F1QJR8_DANRE", "mass": 33620.0, "length": 304, "protein_name": "SAP30-binding protein", "gene_name": "sap30bp", "organism": "Zebrafish", "refseq_name": "SAP30-binding protein", "refseq_ac": "NP_955859", "gene_names_uniprotkb": "sap30bp; fb33d03; wu:fb33d03; zgc:55340", "gene_names_refseq": "fb33d03; sap30bp; wu:fb33d03; zgc:55340", "protein_names_uniprotkb": "SAP30-binding protein", "protein_names_refseq": "SAP30-binding protein; transcriptional regulator protein", "tax_id": 7955, "disease": "", "pathway": " (dre:321738)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "21148433;25556858;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC048030.1, EH580074.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH492954.1, EH435164.1, EH475763.1 and EH461164.1. On Apr 27, 2013 this sequence version replaced NP_955859.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFG7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QJR8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJS3-1", "uniprot_id": "F1QJS3_DANRE", "mass": 114647.0, "length": 1010, "protein_name": "DNA excision repair protein ERCC-5", "gene_name": "ercc5", "organism": "Zebrafish", "refseq_name": "DNA excision repair protein ERCC-5", "refseq_ac": "XP_003197653", "gene_names_uniprotkb": "ercc5", "gene_names_refseq": "ercc5", "protein_names_uniprotkb": "DNA excision repair protein ERCC-5", "protein_names_refseq": "DNA excision repair protein ERCC-5", "tax_id": 7955, "disease": "disease by infectious agent (Disease Ontology:DOID:0050117); cerebrooculofacioskeletal syndrome 3 (Disease Ontology:DOID:0080913); xeroderma pigmentosum group G (Disease Ontology:DOID:0110849); stomach cancer (Disease Ontology:DOID:10534); lung cancer (Disease Ontology:DOID:1324); melanoma (Disease Ontology:DOID:1909); larynx cancer (Disease Ontology:DOID:2596); high grade glioma (Disease Ontology:DOID:3070); coronary artery disease (Disease Ontology:DOID:3393); lung non-small cell carcinoma (Disease Ontology:DOID:3908)", "pathway": " (R-DRE-5696395); (R-DRE-5696400); (R-DRE-6782135)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003197653.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 10, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RID4;A0AC58JFY0", "ec_number_list": "", "go_molecular_function": "GO:0016788 hydrolase activity, acting on ester bonds;GO:0046872 metal ion binding;GO:0004520 DNA endonuclease activity;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0009411 response to UV;GO:0006289 nucleotide-excision repair", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QJS3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJT5-1", "uniprot_id": "F1QJT5_DANRE", "mass": 18057.0, "length": 163, "protein_name": "Retinoic acid receptor responder protein 2", "gene_name": "si:ch1073-406l10.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100536977 precursor", "refseq_ac": "NP_001373462", "gene_names_uniprotkb": "si:ch1073-406l10.2", "gene_names_refseq": "si:ch1073-406l10.2", "protein_names_uniprotkb": "Retinoic acid receptor responder protein 2; Chemerin", "protein_names_refseq": "uncharacterized protein LOC100536977 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100536977); (R-DRE-114608)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH497699.1, EH523980.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476803 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Aug 29, 2020 this sequence version replaced XP_003201376.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RJL5", "ec_number_list": "", "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006935 chemotaxis;GO:0006954 inflammatory response;GO:0030154 cell differentiation;GO:0050994 regulation of lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QJT5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QJW0-1", "uniprot_id": "F1QJW0_DANRE", "mass": 18250.0, "length": 167, "protein_name": "Uncharacterized protein C16orf52 homolog B", "gene_name": "mosmoa", "organism": "Zebrafish", "refseq_name": "uncharacterized protein C16orf52 homolog B", "refseq_ac": "XP_003198233", "gene_names_uniprotkb": "mosmoa", "gene_names_refseq": "mosmoa", "protein_names_uniprotkb": "Uncharacterized protein C16orf52 homolog B", "protein_names_refseq": "uncharacterized protein C16orf52 homolog B", "tax_id": 7955, "disease": "", "pathway": " (dre:100535551)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RSH7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0060170 ciliary membrane", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0045879 negative regulation of smoothened signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QJW0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QK10-1", "uniprot_id": "F1QK10_DANRE", "mass": 38861.0, "length": 342, "protein_name": "5'-AMP-activated protein kinase subunit gamma-3b", "gene_name": "prkag3b", "organism": "Zebrafish", "refseq_name": "5'-AMP-activated protein kinase subunit gamma-3b", "refseq_ac": "NP_001035456", "gene_names_uniprotkb": "prkag3b; zgc:136850", "gene_names_refseq": "prkag3b; zgc:136850", "protein_names_uniprotkb": "5'-AMP-activated protein kinase subunit gamma-3b", "protein_names_refseq": "5'-AMP-activated protein kinase subunit gamma-3b", "tax_id": 7955, "disease": "", "pathway": " (dre:678619); (R-DRE-1632852); (R-DRE-380972); (R-DRE-5628897); (R-DRE-6804756)", "pathway_count": 5, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115291.1, GDQH01026917.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## NMD candidate :: translation inferred from conservation ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1, EH441632.1 and BC115291.1. On Feb 25, 2016 this sequence version replaced NP_001035456.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N8V6", "ec_number_list": "", "go_molecular_function": "GO:0019901 protein kinase binding;GO:0016208 AMP binding;GO:0019887 protein kinase regulator activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0031588 nucleotide-activated protein kinase complex", "go_biological_process": "GO:0006110 regulation of glycolytic process;GO:0006633 fatty acid biosynthetic process;GO:0042149 cellular response to glucose starvation;GO:0045722 positive regulation of gluconeogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1QK10-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QK31-1", "uniprot_id": "F1QK31_DANRE", "mass": 28189.0, "length": 258, "protein_name": "RELT-like protein 1", "gene_name": "rell1", "organism": "Zebrafish", "refseq_name": "RELT-like protein 1", "refseq_ac": "NP_001188289", "gene_names_uniprotkb": "rell1", "gene_names_refseq": "rell1", "protein_names_uniprotkb": "RELT-like protein 1", "protein_names_refseq": "RELT-like protein 1-like; RELT-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:799556)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;32784920", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01025336.1, BC088389.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1 and EH433795.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1M1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:1900745 positive regulation of p38MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QK31-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QK42-1", "uniprot_id": "F1QK42_DANRE", "mass": 17438.0, "length": 161, "protein_name": "Neuritin 1-like a precursor", "gene_name": "nrn1la", "organism": "Zebrafish", "refseq_name": "neuritin 1-like a precursor", "refseq_ac": "NP_001311430", "gene_names_uniprotkb": "nrn1la; nrn1l; si:ch211-265b3.1", "gene_names_refseq": "nrn1la; nrn1l; si:ch211-265b3.1", "protein_names_uniprotkb": "Neuritin 1-like a precursor", "protein_names_refseq": "neuritin 1-like a precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100004307)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588724.1524789.1, SRR32588727.3255429.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476748, SAMEA4476749 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2J5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0098552 side of membrane", "go_biological_process": "GO:1990138 neuron projection extension", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QK42-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QK51-1", "uniprot_id": "F1QK51_DANRE", "mass": 34678.0, "length": 309, "protein_name": "Carbonic anhydrase", "gene_name": "ca4c", "organism": "Zebrafish", "refseq_name": "carbonic anhydrase IV c precursor", "refseq_ac": "NP_001373159", "gene_names_uniprotkb": "ca4c; si:dkey-225f3.3", "gene_names_refseq": "ca4c; si:dkey-225f3.3", "protein_names_uniprotkb": "Carbonic anhydrase; 4.2.1.1", "protein_names_refseq": "ca4b; carbonic anhydrase IV c precursor; zCA4c", "tax_id": 7955, "disease": "", "pathway": " (dre:407683)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "18322140;23565095;27189481;34617657", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588724.1804280.1, SRR32588717.6128357.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On Nov 27, 2025 this sequence version replaced NP_001373159.1., [RefSeq]; Reversible hydration of carbon dioxide., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RJF7", "ec_number_list": "4.2.1.1", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004089 carbonate dehydratase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QK51-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QK60-1", "uniprot_id": "F1QK60_DANRE", "mass": 53997.0, "length": 497, "protein_name": "Keratin, type II cytoskeletal 4", "gene_name": "krt4", "organism": "Zebrafish", "refseq_name": "keratin, type II cytoskeletal 4", "refseq_ac": "NP_571584", "gene_names_uniprotkb": "krt4; cb59; etID20321.6; krt8; wu:fa91a11; wu:fd19e09; wu:fl23c09; zf-K8", "gene_names_refseq": "cb59; etID20321.6; krt4; krt8; wu:fa91a11; wu:fd19e09; wu:fl23c09; zf-K8", "protein_names_uniprotkb": "Keratin, type II cytoskeletal 4", "protein_names_refseq": "cytokeratin; keratin 8; keratin, type II cytoskeletal 4", "tax_id": 7955, "disease": "", "pathway": " (dre:794486); (R-DRE-6798695); (R-DRE-6805567); (R-DRE-6809371)", "pathway_count": 4, "publication_count": 10, "publication_id_list": "10440850;11836785;12190990;37528073;37595046;37746310;38265193;39179789;9119115;9377174", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155774.1, AF134850.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1, CN508834.1, EH999878.1, DT055310.1 and EH488376.1. On Oct 20, 2015 this sequence version replaced NP_571584.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P5N6", "ec_number_list": "", "go_molecular_function": "GO:0030280 structural constituent of skin epidermis", "go_cellular_component": "GO:0045095 keratin filament", "go_biological_process": "GO:0031424 keratinization;GO:0045109 intermediate filament organization", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QK60-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QK72-1", "uniprot_id": "F1QK72_DANRE", "mass": 35129.0, "length": 324, "protein_name": "Carbonic anhydrase", "gene_name": "ca15c", "organism": "Zebrafish", "refseq_name": "carbonic anhydrase XV c isoform X1", "refseq_ac": "XP_017213978", "gene_names_uniprotkb": "ca15c; zgc:153965", "gene_names_refseq": "ca15c; zgc:153965", "protein_names_uniprotkb": "Carbonic anhydrase; 4.2.1.1", "protein_names_refseq": "carbonic anhydrase XV c isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:768190)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Reversible hydration of carbon dioxide., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z3J0", "ec_number_list": "4.2.1.1", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004089 carbonate dehydratase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QK72-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QKA1-1", "uniprot_id": "F1QKA1_DANRE", "mass": 20215.0, "length": 181, "protein_name": "Bcl-2-binding component 3 isoform X1", "gene_name": "bbc3", "organism": "Zebrafish", "refseq_name": "bcl-2-binding component 3", "refseq_ac": "NP_001038937", "gene_names_uniprotkb": "bbc3", "gene_names_refseq": "bbc3", "protein_names_uniprotkb": "Bcl-2-binding component 3 isoform X1", "protein_names_refseq": "Puma; bcl-2-binding component 3", "tax_id": 7955, "disease": "lung non-small cell carcinoma (Disease Ontology:DOID:3908)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395014.1159915.1, GFIL01002206.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476741, SAMEA4476764 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On or before Jul 14, 2025 this sequence version replaced XP_009289949.1, NP_001038937.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AHE7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0043065 positive regulation of apoptotic process;GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage;GO:0097194 execution phase of apoptosis;GO:0090200 positive regulation of release of cytochrome c from mitochondria;GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QKA1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QKA5-1", "uniprot_id": "F1QKA5_DANRE", "mass": 10250.0, "length": 88, "protein_name": "Coiled-coil-helix-coiled-coil-helix domain-containing protein 7", "gene_name": "chchd7", "organism": "Zebrafish", "refseq_name": "coiled-coil-helix-coiled-coil-helix domain-containing protein 7", "refseq_ac": "NP_001120658", "gene_names_uniprotkb": "chchd7; zgc:172166", "gene_names_refseq": "chchd7; zgc:172166", "protein_names_uniprotkb": "Coiled-coil-helix-coiled-coil-helix domain-containing protein 7", "protein_names_refseq": "coiled-coil-helix-coiled-coil-helix domain-containing protein 7", "tax_id": 7955, "disease": "", "pathway": " (dre:561510)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "20565988;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH437493.1, BC154567.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505386 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1 and EH517691.1. On Nov 2, 2010 this sequence version replaced NP_001120658.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NGW3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005758 mitochondrial intermembrane space", "go_biological_process": "GO:0033108 mitochondrial respiratory chain complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QKA5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QKG2-1", "uniprot_id": "F1QKG2_DANRE", "mass": 61359.0, "length": 564, "protein_name": "Polypyrimidine tract-binding protein 1", "gene_name": "ptbp1b", "organism": "Zebrafish", "refseq_name": "polypyrimidine tract-binding protein 1b", "refseq_ac": "NP_001116126", "gene_names_uniprotkb": "ptbp1b; cb363; id:ibd2901; im:7145323; sb:cb363; si:ch211-262i1.1; wu:fa04b05; wu:fb16f08; wu:fc58e03", "gene_names_refseq": "cb363; id:ibd2901; im:7145323; ptbp1b; sb:cb363; si:ch211-262i1.1; wu:fa04b05; wu:fb16f08; wu:fc58e03", "protein_names_uniprotkb": "Polypyrimidine tract-binding protein 1", "protein_names_refseq": "polypyrimidine tract-binding protein 1b", "tax_id": 7955, "disease": "", "pathway": " (dre:321220)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "22855693;26147004;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091854.1, SRR32588724.3135753.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Mar 12, 2008 this sequence version replaced XP_709198.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NGA8", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing;GO:0010629 negative regulation of gene expression;GO:0008380 RNA splicing;GO:0045595 regulation of cell differentiation;GO:0043484 regulation of RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QKG2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QKM9-1", "uniprot_id": "F1QKM9_DANRE", "mass": 85874.0, "length": 788, "protein_name": "Transmembrane protease serine 9 isoform X1", "gene_name": "tmprss9", "organism": "Zebrafish", "refseq_name": "transmembrane protease serine 9 isoform X1", "refseq_ac": "XP_021325244", "gene_names_uniprotkb": "tmprss9", "gene_names_refseq": "tmprss9", "protein_names_uniprotkb": "Transmembrane protease serine 9 isoform X1", "protein_names_refseq": "transmembrane protease serine 9 isoform X1", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041)", "pathway": " (dre:562051)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PK52", "ec_number_list": "", "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0008236 serine-type peptidase activity;GO:0008233 peptidase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0031639 plasminogen activation;GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QKM9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QKS9-1", "uniprot_id": "F1QKS9_DANRE", "mass": 10330.0, "length": 87, "protein_name": "3.6.5.3; Small ribosomal subunit protein bS21m", "gene_name": "mrps21", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein bS21m", "refseq_ac": "NP_001153310", "gene_names_uniprotkb": "mrps21; zgc:163126", "gene_names_refseq": "mrps21; zgc:163126", "protein_names_uniprotkb": "3.6.5.3; Small ribosomal subunit protein bS21m", "protein_names_refseq": "small ribosomal subunit protein bS21m", "tax_id": 7955, "disease": "", "pathway": " (dre:100073334); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 3, "publication_id_list": "26469318;27189481;31307377", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH480432.1, EH560127.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505389, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1, EH454674.1 and EH549457.1. On Nov 5, 2010 this sequence version replaced NP_001153310.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRH9", "ec_number_list": "3.6.5.-;3.1.1.29;3.6.5.3;7.1.1.2;7.1.1.9", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QKS9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QKX9-1", "uniprot_id": "F1QKX9_DANRE", "mass": 11703.0, "length": 104, "protein_name": "Appetite-regulating hormone isoform X1", "gene_name": "ghrl", "organism": "Zebrafish", "refseq_name": "appetite-regulating hormone isoform X1", "refseq_ac": "XP_021332623", "gene_names_uniprotkb": "ghrl; ghre; ghr", "gene_names_refseq": "ghre; ghrl; ghr", "protein_names_uniprotkb": "Appetite-regulating hormone isoform X1", "protein_names_refseq": "appetite-regulating hormone isoform X1", "tax_id": 7955, "disease": "obstructive sleep apnea (Disease Ontology:DOID:0050848); morbid obesity (Disease Ontology:DOID:11981); Prader-Willi syndrome (Disease Ontology:DOID:11983); cardiovascular system disease (Disease Ontology:DOID:1287); multiple endocrine neoplasia (Disease Ontology:DOID:3125); middle cerebral artery infarction (Disease Ontology:DOID:3525); esophagus adenocarcinoma (Disease Ontology:DOID:4914); end stage renal disease (Disease Ontology:DOID:783); type 2 diabetes mellitus (Disease Ontology:DOID:9352); diabetic neuropathy (Disease Ontology:DOID:9743); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:798613); (R-DRE-416476); (R-DRE-422085)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 11, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PZZ3", "ec_number_list": "", "go_molecular_function": "GO:0016608 growth hormone-releasing hormone activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0032095 regulation of response to food;GO:0060398 regulation of growth hormone receptor signaling pathway;GO:0007507 heart development;GO:0032094 response to food;GO:0043009 chordate embryonic development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QKX9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QL30-1", "uniprot_id": "F1QL30_DANRE", "mass": 49253.0, "length": 447, "protein_name": "Protoheme IX farnesyltransferase, mitochondrial", "gene_name": "cox10", "organism": "Zebrafish", "refseq_name": "protoheme IX farnesyltransferase, mitochondrial", "refseq_ac": "NP_001159731", "gene_names_uniprotkb": "cox10; im:7145568; im:7157205; wu:fb18a03", "gene_names_refseq": "cox10; im:7145568; im:7157205; wu:fb18a03", "protein_names_uniprotkb": "Protoheme IX farnesyltransferase, mitochondrial; 2.5.1.-; Heme O synthase", "protein_names_refseq": "COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor; COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase; cytochrome c oxidase assembly homolog 10; protoheme IX farnesyltransferase, mitochondrial", "tax_id": 7955, "disease": "mitochondrial complex IV deficiency nuclear type 3 (Disease Ontology:DOID:0070492)", "pathway": " (dre:553384); (R-DRE-189451)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "26854857;27086301;27189481;35893052;36208295", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124463.1, GDQH01007975.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1 and BC124463.1. On May 21, 2010 this sequence version replaced XP_685590.3., [RefSeq]; Converts protoheme IX and farnesyl diphosphate to heme O., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NVI9", "ec_number_list": "2.5.1.-", "go_molecular_function": "GO:0008495 protoheme IX farnesyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0017004 cytochrome complex assembly;GO:0006784 heme A biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QL30-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QL34-1", "uniprot_id": "F1QL34_DANRE", "mass": 36966.0, "length": 335, "protein_name": "ADP-ribose pyrophosphatase", "gene_name": "nudt9", "organism": "Zebrafish", "refseq_name": "ADP-ribose pyrophosphatase, mitochondrial precursor", "refseq_ac": "NP_998517", "gene_names_uniprotkb": "nudt9; fu33g07; sb:cb392; wu:fj16b09; wu:fu33g07; zgc:63924", "gene_names_refseq": "fu33g07; nudt9; sb:cb392; wu:fj16b09; wu:fu33g07; zgc:63924", "protein_names_uniprotkb": "ADP-ribose pyrophosphatase; 3.6.1.13; ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; Nucleoside diphosphate-linked moiety X motif 9", "protein_names_refseq": "ADP-ribose pyrophosphatase, mitochondrial precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:406661); (R-DRE-2393930)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "16109975;21669877;25692557;26469318;31844070", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC152216.1, GFIL01028928.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1, EH449789.1 and EH523281.1. On or before Oct 16, 2010 this sequence version replaced XP_002661212.1, NP_998517.1., [RefSeq]; Hydrolyzes ADP-ribose (ADPR) to AMP and ribose 5'-phosphate. Has also a weak phosphohydrolase activity against NADH and FAD (in vitro)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PPR4", "ec_number_list": "3.6.1.13;3.6.1.16;3.6.1.53", "go_molecular_function": "GO:0047631 ADP-ribose diphosphatase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:1902159 regulation of cyclic nucleotide-gated ion channel activity", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QL34-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QL82-1", "uniprot_id": "F1QL82_DANRE", "mass": 112804.0, "length": 1021, "protein_name": "Teashirt homolog 3", "gene_name": "tshz3a", "organism": "Zebrafish", "refseq_name": "teashirt homolog 3", "refseq_ac": "XP_686844", "gene_names_uniprotkb": "tshz3a", "gene_names_refseq": "tshz3a", "protein_names_uniprotkb": "Teashirt homolog 3", "protein_names_refseq": "teashirt homolog 3", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041)", "pathway": " (dre:558522)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_686844.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UV21", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0002087 regulation of respiratory gaseous exchange by nervous system process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QL82-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QLA7-1", "uniprot_id": "F1QLA7_DANRE", "mass": 55795.0, "length": 501, "protein_name": "triacylglycerol lipase", "gene_name": "LOC100331214", "organism": "Zebrafish", "refseq_name": "lipoprotein lipase isoform X1", "refseq_ac": "XP_002666287", "gene_names_uniprotkb": "LOC100331214", "gene_names_refseq": "LOC100331214", "protein_names_uniprotkb": "triacylglycerol lipase; 3.1.1.3", "protein_names_refseq": "lipoprotein lipase isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100331214)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002666287.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1REC3", "ec_number_list": "3.1.1.34;3.1.1.-;3.1.1.23;3.1.1.79;3.1.1.4;3.1.1.3;3.1.1.5;3.1.1.116;3.1.1.6", "go_molecular_function": "GO:0008201 heparin binding;GO:0034185 apolipoprotein binding;GO:0046872 metal ion binding;GO:0008970 phospholipase A1 activity;GO:0004465 lipoprotein lipase activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:0034375 high-density lipoprotein particle remodeling;GO:0042632 cholesterol homeostasis;GO:0019433 triglyceride catabolic process;GO:0034372 very-low-density lipoprotein particle remodeling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QLA7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QLG2-1", "uniprot_id": "F1QLG2_DANRE", "mass": 74359.0, "length": 663, "protein_name": "Metastasis-associated protein MTA2 isoform X1", "gene_name": "mta2", "organism": "Zebrafish", "refseq_name": "metastasis-associated protein MTA2 isoform X1", "refseq_ac": "XP_005172244", "gene_names_uniprotkb": "mta2; wu:fd61b05; wu:fi29g02; zgc:63487", "gene_names_refseq": "mta2; wu:fd61b05; wu:fi29g02; zgc:63487", "protein_names_uniprotkb": "Metastasis-associated protein MTA2 isoform X1", "protein_names_refseq": "metastasis-associated protein MTA2 isoform X1", "tax_id": 7955, "disease": "systemic lupus erythematosus (Disease Ontology:DOID:9074)", "pathway": " (R-DRE-3214815); (R-DRE-6804758); (R-DRE-8943724); (R-DRE-9937850); (R-DRE-9940951)", "pathway_count": 5, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BK15", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding;GO:0003713 transcription coactivator activity;GO:0008270 zinc ion binding;GO:0003714 transcription corepressor activity;GO:0042826 histone deacetylase binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0016581 NuRD complex;GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0031101 fin regeneration;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QLG2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QLG4-1", "uniprot_id": "F1QLG4_DANRE", "mass": 42008.0, "length": 356, "protein_name": "Heparan sulfate 2-O-sulfotransferase 1", "gene_name": "hs2st1b", "organism": "Zebrafish", "refseq_name": "heparan sulfate 2-O-sulfotransferase 1", "refseq_ac": "XP_009300695", "gene_names_uniprotkb": "hs2st1b", "gene_names_refseq": "hs2st1b", "protein_names_uniprotkb": "Heparan sulfate 2-O-sulfotransferase 1; 2-O-sulfotransferase; HS 2-O-sulfotransferase; Heparan sulfate 2-sulfotransferase", "protein_names_refseq": "heparan sulfate 2-O-sulfotransferase 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100151174)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3BAE0", "ec_number_list": "", "go_molecular_function": "GO:0004394 heparan sulfate 2-sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0015012 heparan sulfate proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QLG4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QLN8-1", "uniprot_id": "F1QLN8_DANRE", "mass": 95602.0, "length": 839, "protein_name": "protein-tyrosine-phosphatase", "gene_name": "ptpn3", "organism": "Zebrafish", "refseq_name": "tyrosine-protein phosphatase non-receptor type 3", "refseq_ac": "XP_687930", "gene_names_uniprotkb": "ptpn3", "gene_names_refseq": "ptpn3", "protein_names_uniprotkb": "protein-tyrosine-phosphatase; 3.1.3.48", "protein_names_refseq": "tyrosine-protein phosphatase non-receptor type 3", "tax_id": 7955, "disease": "", "pathway": " (dre:407635); (R-DRE-5675221)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_687930.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UQV2", "ec_number_list": "3.1.3.48;2.7.11.24", "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0009898 cytoplasmic side of plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QLN8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QLW3-1", "uniprot_id": "F1QLW3_DANRE", "mass": 32336.0, "length": 290, "protein_name": "Pirin", "gene_name": "pir", "organism": "Zebrafish", "refseq_name": "pirin", "refseq_ac": "NP_001002550", "gene_names_uniprotkb": "pir; zgc:92778", "gene_names_refseq": "pir; zgc:92778", "protein_names_uniprotkb": "Pirin; 1.13.11.24; Probable quercetin 2,3-dioxygenase PIR", "protein_names_refseq": "pirin", "tax_id": 7955, "disease": "cholangiocarcinoma (Disease Ontology:DOID:4947)", "pathway": " (dre:436823); (R-DRE-8935690)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "26469318;27189481;33757938;34093860", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076253.1, GFIL01030411.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505388 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CN510778.1, EH498285.1, EH585218.1, JBMGRA010000011.1, EH602648.1 and EH524565.1. On Dec 5, 2015 this sequence version replaced NP_001002550.1., [RefSeq]; Transcriptional coregulator of NF-kappa-B which facilitates binding of NF-kappa-B proteins to target kappa-B genes in a redox-state-dependent manner. May be required for efficient terminal myeloid maturation of hematopoietic cells. Has quercetin 2,3-dioxygenase activity (in vitro)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0M7", "ec_number_list": "1.13.11.24", "go_molecular_function": "GO:0008127 quercetin 2,3-dioxygenase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0030224 monocyte differentiation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QLW3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QM17-1", "uniprot_id": "F1QM17_DANRE", "mass": 87384.0, "length": 804, "protein_name": "SNF-related serine/threonine-protein kinase", "gene_name": "snrka", "organism": "Zebrafish", "refseq_name": "SNF-related serine/threonine-protein kinase", "refseq_ac": "NP_001180256", "gene_names_uniprotkb": "snrka; snrk; wu:fc65g02; zgc:92047", "gene_names_refseq": "snrka; snrk; wu:fc65g02; zgc:92047", "protein_names_uniprotkb": "SNF-related serine/threonine-protein kinase; 2.7.11.1; SNF1-related kinase", "protein_names_refseq": "SNF-related serine/threonine-protein kinase", "tax_id": 7955, "disease": "", "pathway": " (dre:436661)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "19389629;26469318;8373170", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC168505.1, GFIL01039129.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505382, SAMEA3505388 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; May play a role in hematopoietic cell proliferation or differentiation. Potential mediator of neuronal apoptosis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUY5", "ec_number_list": "2.7.11.1;2.7.11.13;2.7.11.25;2.7.10.1;2.7.11.22;2.7.11.21;2.7.11.17;2.7.12.1;2.7.12.2;2.7.11.24;2.7.10.2;2.7.11.23;2.7.1.150;2.7.11.12;2.7.11.39;2.7.11.11;2.7.1.153;2.7.1.137;2.7.1.154;2.7.11.26;2.7.11.31", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QM17-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QM53-1", "uniprot_id": "F1QM53_DANRE", "mass": 17431.0, "length": 164, "protein_name": "Iron-sulfur cluster assembly enzyme b", "gene_name": "iscub", "organism": "Zebrafish", "refseq_name": "iron-sulfur cluster assembly enzyme b", "refseq_ac": "NP_001017800", "gene_names_uniprotkb": "iscub; fj08f02; wu:fj08f02; zgc:110331", "gene_names_refseq": "fj08f02; iscub; wu:fj08f02; zgc:110331", "protein_names_uniprotkb": "Iron-sulfur cluster assembly enzyme b", "protein_names_refseq": "iron-sulfur cluster assembly enzyme b; iron-sulfur cluster scaffold homolog b; nitrogen fixation cluster-like", "tax_id": 7955, "disease": "pre-eclampsia (Disease Ontology:DOID:10591); clear cell renal cell carcinoma (Disease Ontology:DOID:4467)", "pathway": " (dre:550498)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "12477932;21873635;36741438", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092881.1, GFIL01013520.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1 and BC092881.1. On Jan 24, 2009 this sequence version replaced NP_001017800.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5P4", "ec_number_list": "", "go_molecular_function": "GO:0051537 2 iron, 2 sulfur cluster binding;GO:0008198 ferrous iron binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0006879 intracellular iron ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QM53-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QM54-1", "uniprot_id": "F1QM54_DANRE", "mass": 26732.0, "length": 237, "protein_name": "Ras homolog family member Ub", "gene_name": "rhoub", "organism": "Zebrafish", "refseq_name": "ras homolog family member Ub", "refseq_ac": "NP_001017784", "gene_names_uniprotkb": "rhoub; fb18g01; wu:fb18g01; zgc:110357", "gene_names_refseq": "fb18g01; rhoub; wu:fb18g01; zgc:110357", "protein_names_uniprotkb": "Ras homolog family member Ub", "protein_names_refseq": "ras homolog family member Ub; ras homolog gene family, member Ub; ras-like protein Rhoub", "tax_id": 7955, "disease": "", "pathway": " (dre:550481)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "15894457;19308258;24422634;24607366;26469318;27189481;27910850;33741714;38270285", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01032664.1, GDQH01005799.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476731, SAMEA4476735 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1, EH449914.1 and CT690097.2. On Feb 11, 2016 this sequence version replaced NP_001017784.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5N1", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0019901 protein kinase binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0007015 actin filament organization;GO:0007165 signal transduction;GO:0007264 small GTPase-mediated signal transduction;GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F1QM54-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QM84-1", "uniprot_id": "F1QM84_DANRE", "mass": 157587.0, "length": 1406, "protein_name": "Nischarin isoform X1", "gene_name": "nisch", "organism": "Zebrafish", "refseq_name": "nischarin isoform X1", "refseq_ac": "XP_002666276", "gene_names_uniprotkb": "nisch", "gene_names_refseq": "nisch", "protein_names_uniprotkb": "Nischarin isoform X1", "protein_names_refseq": "nischarin isoform X1", "tax_id": 7955, "disease": "congestive heart failure (Disease Ontology:DOID:6000)", "pathway": " (dre:553087); (R-DRE-9013149); (R-DRE-9696264); (R-DRE-9696270)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002666276.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RI10", "ec_number_list": "", "go_molecular_function": "GO:0005178 integrin binding;GO:0035091 phosphatidylinositol binding", "go_cellular_component": "", "go_biological_process": "GO:0016601 Rac protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QM84-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QM86-1", "uniprot_id": "F1QM86_DANRE", "mass": 24252.0, "length": 212, "protein_name": "Chromobox protein homolog 1a", "gene_name": "cbx1a", "organism": "Zebrafish", "refseq_name": "chromobox protein homolog 1a", "refseq_ac": "NP_956040", "gene_names_uniprotkb": "cbx1a; cbx1; wu:fe14b09; zgc:55739", "gene_names_refseq": "cbx1a; cbx1; wu:fe14b09; zgc:55739", "protein_names_uniprotkb": "Chromobox protein homolog 1a", "protein_names_refseq": "chromobox homolog 1 (HP1 beta homolog Drosophila); chromobox protein homolog 1a", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283)", "pathway": " (dre:326746); (R-DRE-9940465)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "24240475;24467753;25059688;25485542;25985063;29284669", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045443.1, GDQH01003201.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1, EH545424.1 and EH457628.1. On Nov 5, 2015 this sequence version replaced NP_956040.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFU2", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005721 pericentric heterochromatin", "go_biological_process": "GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QM86-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QM89-1", "uniprot_id": "F1QM89_DANRE", "mass": 32719.0, "length": 300, "protein_name": "CD276 antigen isoform X1; CD276 antigen precursor", "gene_name": "cd276", "organism": "Zebrafish", "refseq_name": "CD276 antigen precursor", "refseq_ac": "NP_001074091", "gene_names_uniprotkb": "cd276; sc:d0645; zgc:158279", "gene_names_refseq": "cd276; sc:d0645; zgc:158279", "protein_names_uniprotkb": "CD276 antigen isoform X1; CD276 antigen precursor", "protein_names_refseq": "CD276 antigen precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:791140)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "22805612;25490391;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01003434.1, SRR32588720.2496707.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On Jun 16, 2016 this sequence version replaced NP_001074091.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYL5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007166 cell surface receptor signaling pathway;GO:0031295 T cell costimulation;GO:0042130 negative regulation of T cell proliferation;GO:0071222 cellular response to lipopolysaccharide", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QM89-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QM98-1", "uniprot_id": "F1QM98_DANRE", "mass": 89333.0, "length": 826, "protein_name": "Zinc finger protein 281", "gene_name": "znf281b", "organism": "Zebrafish", "refseq_name": "zinc finger protein 281b", "refseq_ac": "NP_001012505", "gene_names_uniprotkb": "znf281b; fc47h12; im:7158782; wu:fc47h12; zgc:113026", "gene_names_refseq": "fc47h12; im:7158782; wu:fc47h12; zgc:113026; znf281b", "protein_names_uniprotkb": "Zinc finger protein 281", "protein_names_refseq": "zinc finger protein 281-like; zinc finger protein 281b", "tax_id": 7955, "disease": "", "pathway": " (dre:503523)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;30061596;39302832", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC090180.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC090180.1, CT653212.2, CT726855.2 and AI793460.1. On Apr 15, 2009 this sequence version replaced NP_001012505.1., [RefSeq]; Transcription repressor that plays a role in regulation of embryonic stem cells (ESCs) differentiation. Required for ESCs differentiation and acts by mediating autorepression of NANOG in ESCs: binds to the NANOG promoter and promotes association of NANOG protein to its own promoter and recruits the NuRD complex, which deacetylates histones. Not required for establishement and maintenance of ESCs. Represses the transcription of a number of genes including GAST, ODC1 and VIM. Binds to the G-rich box in the enhancer region of these genes., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N479", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0010470 regulation of gastrulation;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0001704 formation of primary germ layer", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QM98-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QME4-1", "uniprot_id": "F1QME4_DANRE", "mass": 48298.0, "length": 422, "protein_name": "Sulfotransferase", "gene_name": "hs3st4", "organism": "Zebrafish", "refseq_name": "heparan sulfate glucosamine 3-O-sulfotransferase 4", "refseq_ac": "NP_001074058", "gene_names_uniprotkb": "hs3st4; 3-ost-4; zf3-ost-4", "gene_names_refseq": "3-ost-4; hs3st4; zf3-ost-4", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "heparan sulfate 3-O-sulfotransferase 4; heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4; heparan sulfate glucosamine 3-O-sulfotransferase 4", "tax_id": 7955, "disease": "", "pathway": " (dre:563570); (R-DRE-2022928)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "17075882;24498308;25142596", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: DQ812989.1, SRR32588730.19592651.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476755, SAMEA4476781 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH589020.1 and JBMGRA010000003.1. On Aug 25, 2015 this sequence version replaced NP_001074058.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Data show a role for 3-O-sulfotransferase-4 (3-OST-4) in herpes simplex virus type-1 (HSV-1) pathogenesis. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYK9", "ec_number_list": "2.8.2.-", "go_molecular_function": "GO:0008467 [heparan sulfate]-glucosamine 3-sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QME4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QME9-1", "uniprot_id": "F1QME9_DANRE", "mass": 58213.0, "length": 544, "protein_name": "Forkhead box protein K2", "gene_name": "foxk2a", "organism": "Zebrafish", "refseq_name": "forkhead box protein K2", "refseq_ac": "NP_001184186", "gene_names_uniprotkb": "foxk2a; fj68h08; foxk2; wu:fc20a11; wu:fj68h08", "gene_names_refseq": "fj68h08; foxk2a; foxk2; wu:fc20a11; wu:fj68h08", "protein_names_uniprotkb": "Forkhead box protein K2; Interleukin enhancer-binding factor 1", "protein_names_refseq": "forkhead box K2; forkhead box protein K2", "tax_id": 7955, "disease": "", "pathway": " (dre:324141)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "25556858;26469318;33944782", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC068417.1, BC129151.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC068417.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUW1", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QME9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QMH5-1", "uniprot_id": "F1QMH5_DANRE", "mass": 55701.0, "length": 495, "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "st6gal1", "organism": "Zebrafish", "refseq_name": "beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1", "refseq_ac": "XP_005161355", "gene_names_uniprotkb": "st6gal1; siat1; zgc:136454", "gene_names_refseq": "siat1; st6gal1; zgc:136454", "protein_names_uniprotkb": "Beta-galactoside alpha-2,6-sialyltransferase 1; 2.4.3.1; CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase 1; ST6Gal I; Sialyltransferase 1", "protein_names_refseq": "beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:445376); (R-DRE-4085001); (R-DRE-975577); (R-DRE-977068)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B878", "ec_number_list": "2.4.3.1", "go_molecular_function": "GO:0003835 beta-galactoside alpha-2,6-sialyltransferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005794 Golgi apparatus;GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0097503 sialylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QMH5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QMQ4-1", "uniprot_id": "F1QMQ4_DANRE", "mass": 44890.0, "length": 397, "protein_name": "Relaxin-3 receptor 1", "gene_name": "rxfp3.3a2", "organism": "Zebrafish", "refseq_name": "relaxin-3 receptor 1", "refseq_ac": "XP_001921035", "gene_names_uniprotkb": "rxfp3.3a2", "gene_names_refseq": "rxfp3.3a2", "protein_names_uniprotkb": "Relaxin-3 receptor 1; Relaxin family peptide receptor 3", "protein_names_refseq": "relaxin-3 receptor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100149732)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Receptor for RNL3/relaxin-3. Binding of the ligand inhibit cAMP accumulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QKJ3", "ec_number_list": "", "go_molecular_function": "GO:0016493 C-C chemokine receptor activity;GO:0019957 C-C chemokine binding", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0019722 calcium-mediated signaling;GO:0060326 cell chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QMQ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QN33-1", "uniprot_id": "F1QN33_DANRE", "mass": 183362.0, "length": 1636, "protein_name": "Zinc finger protein 106", "gene_name": "znf106a", "organism": "Zebrafish", "refseq_name": "zinc finger protein 106", "refseq_ac": "XP_003200426", "gene_names_uniprotkb": "znf106a", "gene_names_refseq": "znf106a", "protein_names_uniprotkb": "Zinc finger protein 106", "protein_names_refseq": "zinc finger protein 106", "tax_id": 7955, "disease": "amyotrophic lateral sclerosis (Disease Ontology:DOID:332)", "pathway": " (dre:437005)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003200426.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RMN3;F1QEA7", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005829 cytosol;GO:0016020 membrane", "go_biological_process": "GO:0008286 insulin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QN33-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QN39-1", "uniprot_id": "F1QN39_DANRE", "mass": 40805.0, "length": 357, "protein_name": "cAMP-dependent protein kinase catalytic subunit PRKX", "gene_name": "prkx", "organism": "Zebrafish", "refseq_name": "cAMP-dependent protein kinase catalytic subunit PRKX", "refseq_ac": "XP_690430", "gene_names_uniprotkb": "prkx", "gene_names_refseq": "prkx", "protein_names_uniprotkb": "cAMP-dependent protein kinase catalytic subunit PRKX", "protein_names_refseq": "cAMP-dependent protein kinase catalytic subunit PRKX", "tax_id": 7955, "disease": "", "pathway": " (dre:561941)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_690430.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UUX4;F1Q5S0", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0004691 cAMP-dependent protein kinase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005952 cAMP-dependent protein kinase complex", "go_biological_process": "GO:0007155 cell adhesion;GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QN39-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QNC0-1", "uniprot_id": "F1QNC0_DANRE", "mass": 56622.0, "length": 500, "protein_name": "Uncharacterized protein LOC565042", "gene_name": "si:ch73-109d9.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC565042", "refseq_ac": "NP_001231707", "gene_names_uniprotkb": "si:ch73-109d9.2; fi06b03; fi12a09; wu:fi06b03; wu:fi12a09", "gene_names_refseq": "fi06b03; fi12a09; si:ch73-109d9.2; wu:fi06b03; wu:fi12a09", "protein_names_uniprotkb": "Uncharacterized protein LOC565042", "protein_names_refseq": "uncharacterized protein LOC565042", "tax_id": 7955, "disease": "", "pathway": " (dre:565042)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01043678.1, GDQH01009707.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505382, SAMEA4476729 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Oct 2, 2011 this sequence version replaced XP_693443.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZ70", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1QNC0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QNF2-1", "uniprot_id": "F1QNF2_DANRE", "mass": 20388.0, "length": 177, "protein_name": "Chromobox protein homolog 3a isoform X1", "gene_name": "cbx3a", "organism": "Zebrafish", "refseq_name": "chromobox protein homolog 3a isoform X1", "refseq_ac": "XP_005173826", "gene_names_uniprotkb": "cbx3a; cbx3; wu:fb61b02; zgc:153397", "gene_names_refseq": "cbx3a; cbx3; wu:fb61b02; zgc:153397", "protein_names_uniprotkb": "Chromobox protein homolog 3a isoform X1", "protein_names_refseq": "chromobox protein homolog 3a isoform X1", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283)", "pathway": " (R-DRE-73772); (R-DRE-8953750); (R-DRE-9940465)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BL16", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005721 pericentric heterochromatin", "go_biological_process": "GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QNF2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QNI7-1", "uniprot_id": "F1QNI7_DANRE", "mass": 75616.0, "length": 698, "protein_name": "Cationic amino acid transporter 3", "gene_name": "slc7a3b", "organism": "Zebrafish", "refseq_name": "cationic amino acid transporter 3", "refseq_ac": "XP_001342962", "gene_names_uniprotkb": "slc7a3b", "gene_names_refseq": "slc7a3b", "protein_names_uniprotkb": "Cationic amino acid transporter 3", "protein_names_refseq": "cationic amino acid transporter 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100003376)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_001342962.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q242", "ec_number_list": "", "go_molecular_function": "GO:0015171 amino acid transmembrane transporter activity;GO:0061459 L-arginine transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006865 amino acid transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QNI7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QNJ3-1", "uniprot_id": "F1QNJ3_DANRE", "mass": 57197.0, "length": 541, "protein_name": "Testin", "gene_name": "tes", "organism": "Zebrafish", "refseq_name": "testin", "refseq_ac": "NP_991283", "gene_names_uniprotkb": "tes; zgc:92091", "gene_names_refseq": "tes; zgc:92091", "protein_names_uniprotkb": "Testin", "protein_names_refseq": "testin", "tax_id": 7955, "disease": "", "pathway": " (dre:403032)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;16554046;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075889.1, AY391465.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Jun 25, 2025 this sequence version replaced NP_991283.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PGR8", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005925 focal adhesion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QNJ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QNS6-1", "uniprot_id": "F1QNS6_DANRE", "mass": 135015.0, "length": 1202, "protein_name": "Mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1", "gene_name": "bub1", "organism": "Zebrafish", "refseq_name": "mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1", "refseq_ac": "XP_002665685", "gene_names_uniprotkb": "bub1", "gene_names_refseq": "bub1", "protein_names_uniprotkb": "Mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1", "protein_names_refseq": "mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1", "tax_id": 7955, "disease": "primary autosomal recessive microcephaly 30 (Disease Ontology:DOID:0051041); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:100307076); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002665685.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RKX5", "ec_number_list": "", "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000776 kinetochore", "go_biological_process": "GO:0051754 meiotic sister chromatid cohesion, centromeric;GO:0007094 mitotic spindle assembly checkpoint signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QNS6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QNW5-1", "uniprot_id": "F1QNW5_DANRE", "mass": 86122.0, "length": 791, "protein_name": "Zinc finger and BTB domain-containing protein 39", "gene_name": "zbtb39", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 39", "refseq_ac": "XP_693418", "gene_names_uniprotkb": "zbtb39", "gene_names_refseq": "zbtb39", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 39", "protein_names_refseq": "zinc finger and BTB domain-containing protein 39", "tax_id": 7955, "disease": "", "pathway": " (dre:565015)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_693418.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TBB0", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0002682 regulation of immune system process;GO:0001817 regulation of cytokine production", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QNW5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QNZ8-1", "uniprot_id": "F1QNZ8_DANRE", "mass": 106402.0, "length": 910, "protein_name": "Anoctamin", "gene_name": "ano6", "organism": "Zebrafish", "refseq_name": "anoctamin-6 isoform X1", "refseq_ac": "XP_005164519", "gene_names_uniprotkb": "ano6", "gene_names_refseq": "ano6", "protein_names_uniprotkb": "Anoctamin", "protein_names_refseq": "anoctamin-6 isoform X1", "tax_id": 7955, "disease": "inflammatory bowel disease (Disease Ontology:DOID:0050589); Scott syndrome (Disease Ontology:DOID:0111052); ankylosing spondylitis (Disease Ontology:DOID:7147)", "pathway": " (dre:100535437); (R-DRE-2672351); (R-DRE-6798695); (R-DRE-9769739); (R-DRE-9769743)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BBU6", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0005227 calcium-activated cation channel activity;GO:0005244 voltage-gated monoatomic ion channel activity;GO:0017128 phospholipid scramblase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:1902476 chloride transmembrane transport;GO:0002040 sprouting angiogenesis;GO:0061589 calcium activated phosphatidylserine scrambling;GO:0061590 calcium activated phosphatidylcholine scrambling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QNZ8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QP63-1", "uniprot_id": "F1QP63_DANRE", "mass": 11097.0, "length": 98, "protein_name": "Chemokine (C-C motif) ligand 34b, duplicate 4 precursor", "gene_name": "ccl34b.4", "organism": "Zebrafish", "refseq_name": "chemokine (C-C motif) ligand 34b, duplicate 4 precursor", "refseq_ac": "NP_001108521", "gene_names_uniprotkb": "ccl34b.4; CCL-chr24j; CCL34bd; si:dkey-25o1.5", "gene_names_refseq": "CCL-chr24j; CCL34bd; ccl34b.4; si:dkey-25o1.5", "protein_names_uniprotkb": "Chemokine (C-C motif) ligand 34b, duplicate 4 precursor", "protein_names_refseq": "chemokine (C-C motif) ligand 34b, duplicate 4 precursor; chemokine CCL-C24j", "tax_id": 7955, "disease": "", "pathway": " (dre:556621)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16365434;18482437;23145839;26469318;27189481;28351983;29760055;31546036;33038507;33171870", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EB988266.1, EB985169.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Jul 29, 2011 this sequence version replaced NP_001108521.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFZ5", "ec_number_list": "", "go_molecular_function": "GO:0008009 chemokine activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QP63-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QP75-1", "uniprot_id": "F1QP75_DANRE", "mass": 80275.0, "length": 706, "protein_name": "Origin recognition complex subunit 3", "gene_name": "orc3", "organism": "Zebrafish", "refseq_name": "origin recognition complex subunit 3", "refseq_ac": "NP_997892", "gene_names_uniprotkb": "orc3; fi40c09; orc3l; wu:fa56a02; wu:fi40c09; zgc:55471", "gene_names_refseq": "fi40c09; orc3l; orc3; wu:fa56a02; wu:fi40c09; zgc:55471", "protein_names_uniprotkb": "Origin recognition complex subunit 3", "protein_names_refseq": "origin recognition complex subunit 3", "tax_id": 7955, "disease": "", "pathway": " (dre:334315); (R-DRE-68616); (R-DRE-68689); (R-DRE-68949); (R-DRE-68962)", "pathway_count": 5, "publication_count": 9, "publication_id_list": "15520368;25564650;26321646;26469318;26981540;27189481;28173755;35134499;38321933", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01029170.1, AY391420.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1, CN323322.1, EH581832.1, DY568337.1, EH599142.1 and EH494586.1. On Oct 29, 2015 this sequence version replaced NP_997892.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. The specific DNA sequences that define origins of replication have not been identified yet. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. Binds histone H3 and H4 trimethylation marks H3K9me3, H3K27me3 and H4K20me3., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHM7", "ec_number_list": "", "go_molecular_function": "GO:0003688 DNA replication origin binding", "go_cellular_component": "GO:0005656 nuclear pre-replicative complex;GO:0031261 DNA replication preinitiation complex;GO:0005664 nuclear origin of replication recognition complex", "go_biological_process": "GO:0006270 DNA replication initiation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F1QP75-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPA8-1", "uniprot_id": "F1QPA8_DANRE", "mass": 34440.0, "length": 293, "protein_name": "Sulfotransferase", "gene_name": "sult3st1", "organism": "Zebrafish", "refseq_name": "amine sulfotransferase", "refseq_ac": "XP_687148", "gene_names_uniprotkb": "sult3st1", "gene_names_refseq": "sult3st1", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "amine sulfotransferase", "tax_id": 7955, "disease": "", "pathway": " (dre:558790)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TCY5", "ec_number_list": "", "go_molecular_function": "GO:0008146 sulfotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0051923 sulfation;GO:0006805 xenobiotic metabolic process;GO:0006584 catecholamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QPA8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPB6-1", "uniprot_id": "F1QPB6_DANRE", "mass": 100158.0, "length": 890, "protein_name": "Olfactory receptor CB1 precursor", "gene_name": "olfcb1", "organism": "Zebrafish", "refseq_name": "olfactory receptor CB1 precursor", "refseq_ac": "NP_001186897", "gene_names_uniprotkb": "olfcb1; fc14h06; olfcb1p; si:ch1073-155h21.1; wu:fc14h06", "gene_names_refseq": "fc14h06; olfcb1p; olfcb1; si:ch1073-155h21.1; wu:fc14h06", "protein_names_uniprotkb": "Olfactory receptor CB1 precursor", "protein_names_refseq": "olfactory receptor C family, b1, pseudogene; olfactory receptor CB1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:323944)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;29792162", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01035307.1, SRR32588734.3578175.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898401 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On Jun 25, 2025 this sequence version replaced NP_001186897.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NVM1", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0050909 sensory perception of taste", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QPB6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPC4-1", "uniprot_id": "F1QPC4_DANRE", "mass": 39123.0, "length": 334, "protein_name": "Radial spoke head protein 3 homolog", "gene_name": "rsph3", "organism": "Zebrafish", "refseq_name": "radial spoke head protein 3 homolog", "refseq_ac": "NP_001082864", "gene_names_uniprotkb": "rsph3; rshl2; si:ch211-122h15.2", "gene_names_refseq": "rshl2; rsph3; si:ch211-122h15.2", "protein_names_uniprotkb": "Radial spoke head protein 3 homolog", "protein_names_refseq": "novel radial spoke domain containing protein; radial spoke 3 homolog; radial spoke head 3 homolog; radial spoke head protein 3 homolog; radial spokehead-like 2", "tax_id": 7955, "disease": "primary ciliary dyskinesia 32 (Disease Ontology:DOID:0110603)", "pathway": " (dre:562259)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27189481;28875937;29475374", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01034200.1, SRR32588717.57218492.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On May 20, 2016 this sequence version replaced NP_001082864.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Rsph3 is essential for ciliary motility and otolith formation during early zebrafish development., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1ND17;E7F1L3;Q5TZG6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005929 cilium", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QPC4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPF3-1", "uniprot_id": "F1QPF3_DANRE", "mass": 45860.0, "length": 391, "protein_name": "Ceramide synthase 6", "gene_name": "cers6", "organism": "Zebrafish", "refseq_name": "ceramide synthase 6", "refseq_ac": "XP_693283", "gene_names_uniprotkb": "cers6", "gene_names_refseq": "cers6", "protein_names_uniprotkb": "Ceramide synthase 6", "protein_names_refseq": "ceramide synthase 6", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-1660661)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_693283.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVC7;A0AC58GI14", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0050291 sphingosine N-acyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0046513 ceramide biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QPF3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPF4-1", "uniprot_id": "F1QPF4_DANRE", "mass": 112880.0, "length": 990, "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "usp11", "organism": "Zebrafish", "refseq_name": "ubiquitin carboxyl-terminal hydrolase 11", "refseq_ac": "XP_002663119", "gene_names_uniprotkb": "usp11", "gene_names_refseq": "usp11", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase; 3.4.19.12", "protein_names_refseq": "ubiquitin carboxyl-terminal hydrolase 11", "tax_id": 7955, "disease": "", "pathway": " (dre:568334); (R-DRE-5689880)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002663119.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RR50", "ec_number_list": "3.4.19.12", "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006508 proteolysis;GO:0016579 protein deubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QPF4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPJ1-1", "uniprot_id": "F1QPJ1_DANRE", "mass": 182185.0, "length": 1643, "protein_name": "Laminin subunit gamma-3", "gene_name": "lamc3", "organism": "Zebrafish", "refseq_name": "laminin subunit gamma-3", "refseq_ac": "XP_687343", "gene_names_uniprotkb": "lamc3", "gene_names_refseq": "lamc3", "protein_names_uniprotkb": "Laminin subunit gamma-3", "protein_names_refseq": "laminin subunit gamma-3", "tax_id": 7955, "disease": "", "pathway": " (dre:558958)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_687343.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEI9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005604 basement membrane", "go_biological_process": "GO:0009887 animal organ morphogenesis;GO:0007411 axon guidance;GO:0009888 tissue development;GO:0008045 motor neuron axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QPJ1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPL8-1", "uniprot_id": "F1QPL8_DANRE", "mass": 43907.0, "length": 376, "protein_name": "Substance-K receptor", "gene_name": "tacr2", "organism": "Zebrafish", "refseq_name": "substance-K receptor", "refseq_ac": "NP_001314788", "gene_names_uniprotkb": "tacr2; si:ch211-1n9.11", "gene_names_refseq": "si:ch211-1n9.11; tacr2", "protein_names_uniprotkb": "Substance-K receptor; NK-2 receptor; Neurokinin A receptor; Tachykinin receptor 2", "protein_names_refseq": "substance-K receptor", "tax_id": 7955, "disease": "colitis (Disease Ontology:DOID:0060180); asthma (Disease Ontology:DOID:2841); pulmonary hypertension (Disease Ontology:DOID:6432)", "pathway": " (dre:100002125); (R-DRE-380095); (R-DRE-416476)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "22580006;22689988;23256992;34499158", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01038075.1, SRR32588730.23984344.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476756, SAMEA4476800 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On May 27, 2016 this sequence version replaced XP_001341981.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8D8", "ec_number_list": "", "go_molecular_function": "GO:0016497 substance K receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0097225 sperm midpiece", "go_biological_process": "GO:1902093 positive regulation of flagellated sperm motility", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QPL8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPN5-1", "uniprot_id": "F1QPN5_DANRE", "mass": 73388.0, "length": 642, "protein_name": "Fermitin family homolog 3b", "gene_name": "fermt3b", "organism": "Zebrafish", "refseq_name": "fermitin family homolog 3b", "refseq_ac": "NP_957198", "gene_names_uniprotkb": "fermt3b; zgc:64101", "gene_names_refseq": "fermt3b; zgc:64101", "protein_names_uniprotkb": "Fermitin family homolog 3b", "protein_names_refseq": "fermitin family homolog 3b; fermitin family member 3b; kindlin-3", "tax_id": 7955, "disease": "leukocyte adhesion deficiency 1 (Disease Ontology:DOID:0110910); leukocyte adhesion deficiency 3 (Disease Ontology:DOID:0110912); acute myeloid leukemia (Disease Ontology:DOID:9119)", "pathway": " (dre:393878); (R-DRE-114608)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "21378273;24599960;26469318;27189481;38203224", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588732.11793884.1, SRR32588717.59965516.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN08196787 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On or before Feb 27, 2016 this sequence version replaced XP_009289525.1, NP_957198.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by partial transcript alignments and orthologous alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PBY1;A0AC58H5W4", "ec_number_list": "", "go_molecular_function": "GO:0005178 integrin binding", "go_cellular_component": "GO:0030055 cell-substrate junction", "go_biological_process": "GO:0007229 integrin-mediated signaling pathway;GO:0007160 cell-matrix adhesion;GO:0033632 regulation of cell-cell adhesion mediated by integrin;GO:0007159 leukocyte cell-cell adhesion;GO:0070527 platelet aggregation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QPN5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPN8-1", "uniprot_id": "F1QPN8_DANRE", "mass": 58074.0, "length": 537, "protein_name": "ubiquitinyl hydrolase 1", "gene_name": "otud5b", "organism": "Zebrafish", "refseq_name": "OTU domain-containing protein 5b", "refseq_ac": "NP_001314694", "gene_names_uniprotkb": "otud5b; wu:fi28a06; zgc:100839", "gene_names_refseq": "otud5b; wu:fi28a06; zgc:100839", "protein_names_uniprotkb": "ubiquitinyl hydrolase 1; 3.4.19.12; Deubiquitinating enzyme A", "protein_names_refseq": "OTU domain containing 5b; OTU domain-containing protein 5b", "tax_id": 7955, "disease": "", "pathway": " (dre:445146)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "18248245;20040115;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01029238.1, SRR26395062.1167946.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On May 25, 2016 this sequence version replaced XP_005169343.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2Z0", "ec_number_list": "", "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity;GO:0061578 K63-linked deubiquitinase activity", "go_cellular_component": "", "go_biological_process": "GO:1904263 positive regulation of TORC1 signaling;GO:0006508 proteolysis;GO:0010629 negative regulation of gene expression;GO:0030154 cell differentiation;GO:0090090 negative regulation of canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QPN8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPQ6-1", "uniprot_id": "F1QPQ6_DANRE", "mass": 122942.0, "length": 1101, "protein_name": "Semaphorin-5A", "gene_name": "sema5ba", "organism": "Zebrafish", "refseq_name": "semaphorin-5B isoform X1", "refseq_ac": "XP_684379", "gene_names_uniprotkb": "sema5ba", "gene_names_refseq": "sema5ba", "protein_names_uniprotkb": "Semaphorin-5A; Semaphorin-F", "protein_names_refseq": "semaphorin-5B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556471); (R-DRE-5173214)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_684379.2. COMPLETENESS: full length., [RefSeq]; Bifunctional axonal guidance cue regulated by sulfated proteoglycans; attractive effects result from interactions with heparan sulfate proteoglycans (HSPGs), while the inhibitory effects depend on interactions with chondroitin sulfate proteoglycans (CSPGs). Ligand for receptor PLXNB3. In glioma cells, SEMA5A stimulation of PLXNB3 results in the disassembly of F-actin stress fibers, disruption of focal adhesions and cellular collapse as well as inhibition of cell migration and invasion through ARHGDIA-mediated inactivation of RAC1. May promote angiogenesis by increasing endothelial cell proliferation and migration and inhibiting apoptosis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TD73;A0AC58GH15", "ec_number_list": "", "go_molecular_function": "GO:0030215 semaphorin receptor binding;GO:0045499 chemorepellent activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050975 sensory perception of touch;GO:0030335 positive regulation of cell migration;GO:0071526 semaphorin-plexin signaling pathway;GO:0001755 neural crest cell migration;GO:0007411 axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QPQ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPR4-1", "uniprot_id": "INK1B_DANRE", "mass": 32880.0, "length": 288, "protein_name": "PAK4-inhibitor inka2", "gene_name": "fam212ab", "organism": "Zebrafish", "refseq_name": "PAK4-inhibitor inka2", "refseq_ac": "NP_956082", "gene_names_uniprotkb": "fam212ab; inka1b", "gene_names_refseq": "fam212ab; inka1b; wu:fi03b07; zgc:66438", "protein_names_uniprotkb": "PAK4-inhibitor inka2; Induced in neural crest by AP2-alpha protein 2; zinca2", "protein_names_refseq": "PAK4-inhibitor inka2; family with sequence similarity 212, member Ab; induced in neural crest by AP2, 1b; induced in neural crest by AP2-alpha protein 2; zinca2", "tax_id": 7955, "disease": "", "pathway": " (dre:327328)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "17314132;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055656.1, EH553836.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476732, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055656.1., [RefSeq]; Inhibitor of the serine/threonine-protein kinase pak4/pak5. Acts by binding pak4/pak5 in a substrate-like manner, inhibiting the protein kinase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7SXD0", "ec_number_list": "", "go_molecular_function": "GO:0019901 protein kinase binding;GO:0030291 protein serine/threonine kinase inhibitor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QPR4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPU7-1", "uniprot_id": "F1QPU7_DANRE", "mass": 182770.0, "length": 1603, "protein_name": "Coiled-coil domain containing 88A", "gene_name": "ccdc88b", "organism": "Zebrafish", "refseq_name": "coiled-coil domain containing 88A", "refseq_ac": "NP_001373435", "gene_names_uniprotkb": "ccdc88b; ccdc88a; zgc:175202", "gene_names_refseq": "ccdc88a; ccdc88b; zgc:175202", "protein_names_uniprotkb": "Coiled-coil domain containing 88A", "protein_names_refseq": "coiled-coil domain containing 88A; coiled-coil domain containing 88B; girdin; hook-related protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100330741)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23072875;26469318;27189481;33675748;38203224", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01016531.1, GFIL01003284.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN08196787 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Aug 29, 2020 this sequence version replaced XP_002664526.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RMA0", "ec_number_list": "", "go_molecular_function": "GO:0008017 microtubule binding;GO:0005085 guanyl-nucleotide exchange factor activity;GO:0051959 dynein light intermediate chain binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005813 centrosome", "go_biological_process": "GO:0007165 signal transduction;GO:0030705 cytoskeleton-dependent intracellular transport;GO:0031122 cytoplasmic microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QPU7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPV0-1", "uniprot_id": "F1QPV0_DANRE", "mass": 49471.0, "length": 453, "protein_name": "Glucose-6-phosphate exchanger SLC37A4b", "gene_name": "slc37a4b", "organism": "Zebrafish", "refseq_name": "glucose-6-phosphate exchanger SLC37A4b", "refseq_ac": "NP_001315024", "gene_names_uniprotkb": "slc37a4b; G6pt1; slc37a4; zgc:55871", "gene_names_refseq": "G6pt1; slc37a4b; slc37a4; zgc:55871", "protein_names_uniprotkb": "Glucose-6-phosphate exchanger SLC37A4b", "protein_names_refseq": "glucose-6-phosphate exchanger SLC37A4b; solute carrier family 37 (glucose-6-phosphate transporter), member 4b; solute carrier family 37 (glucose-6-phosphate transporter), member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:393914)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "21643954;27898262;28926587", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588718.35584149.1, SRR32588732.7789671.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000010.1. On or before Sep 30, 2016 this sequence version replaced NP_957234.1, XP_002663666.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGJ1;A0AC58GJG8", "ec_number_list": "", "go_molecular_function": "GO:0061513 glucose 6-phosphate:phosphate antiporter activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0015760 glucose-6-phosphate transport;GO:0035435 phosphate ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QPV0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPV1-1", "uniprot_id": "F1QPV1_DANRE", "mass": 94158.0, "length": 856, "protein_name": "Myosin light chain kinase, smooth muscle isoform X1", "gene_name": "mylk5", "organism": "Zebrafish", "refseq_name": "myosin light chain kinase, smooth muscle isoform X1", "refseq_ac": "XP_005164113", "gene_names_uniprotkb": "mylk5", "gene_names_refseq": "mylk5", "protein_names_uniprotkb": "Myosin light chain kinase, smooth muscle isoform X1", "protein_names_refseq": "myosin light chain kinase, smooth muscle isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100003770)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BBA3", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0004687 myosin light chain kinase activity;GO:0004672 protein kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0003007 heart morphogenesis;GO:0055013 cardiac muscle cell development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QPV1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QPW7-1", "uniprot_id": "F1QPW7_DANRE", "mass": 55193.0, "length": 484, "protein_name": "Gamma-aminobutyric acid receptor subunit beta-1", "gene_name": "gabrb1", "organism": "Zebrafish", "refseq_name": "gamma-aminobutyric acid receptor subunit beta-1", "refseq_ac": "XP_002664179", "gene_names_uniprotkb": "gabrb1", "gene_names_refseq": "gabrb1", "protein_names_uniprotkb": "Gamma-aminobutyric acid receptor subunit beta-1", "protein_names_refseq": "gamma-aminobutyric acid receptor subunit beta-1", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 45 (Disease Ontology:DOID:0080428); autistic disorder (Disease Ontology:DOID:12849); depressive disorder (Disease Ontology:DOID:1596)", "pathway": " (dre:100331377); (R-DRE-977443)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002664179.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RRD1", "ec_number_list": "", "go_molecular_function": "GO:0005254 chloride channel activity;GO:0004890 GABA-A receptor activity;GO:0005230 extracellular ligand-gated monoatomic ion channel activity", "go_cellular_component": "GO:0045211 postsynaptic membrane;GO:0034707 chloride channel complex;GO:1902711 GABA-A receptor complex", "go_biological_process": "GO:1902476 chloride transmembrane transport;GO:0051932 synaptic transmission, GABAergic", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QPW7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQ42-1", "uniprot_id": "F1QQ42_DANRE", "mass": 8213.0, "length": 71, "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1", "gene_name": "ndufa1", "organism": "Zebrafish", "refseq_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 precursor", "refseq_ac": "NP_001002153", "gene_names_uniprotkb": "ndufa1; zgc:86674", "gene_names_refseq": "ndufa1; zgc:86674", "protein_names_uniprotkb": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1; Complex I-MWFE; NADH-ubiquinone oxidoreductase MWFE subunit", "protein_names_refseq": "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 precursor", "tax_id": 7955, "disease": "mitochondrial complex I deficiency (Disease Ontology:DOID:0060536); nuclear type mitochondrial complex I deficiency 12 (Disease Ontology:DOID:0112099)", "pathway": " (dre:415243); (R-DRE-611105); (R-DRE-6799198)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "27189481;28252024;31094706;33548715", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071358.1, GFIL01006676.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1 and BC071358.1. On Nov 18, 2009 this sequence version replaced NP_001002153.1. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein., [RefSeq]; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSZ8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0045271 respiratory chain complex I", "go_biological_process": "GO:0022904 respiratory electron transport chain", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QQ42-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQG9-1", "uniprot_id": "F1QQG9_DANRE", "mass": 35931.0, "length": 327, "protein_name": "Melanocortin receptor 3", "gene_name": "mc3r", "organism": "Zebrafish", "refseq_name": "melanocortin receptor 3", "refseq_ac": "NP_851303", "gene_names_uniprotkb": "mc3r; zgc:194235", "gene_names_refseq": "mc3r; zgc:194235", "protein_names_uniprotkb": "Melanocortin receptor 3", "protein_names_refseq": "melanocortin receptor 3", "tax_id": 7955, "disease": "obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:353153); (R-DRE-375276)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "12851332;17341684;17603878;17707598;19225141;28317906;31178320;31202720;36127383;36290123", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC162747.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Jun 12, 2015 this sequence version replaced NP_851303.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PEC4", "ec_number_list": "", "go_molecular_function": "GO:0017046 peptide hormone binding;GO:0004980 melanocyte-stimulating hormone receptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QQG9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQH0-1", "uniprot_id": "F1QQH0_DANRE", "mass": 37590.0, "length": 335, "protein_name": "ATP-sensitive inward rectifier potassium channel 15", "gene_name": "kcnj15", "organism": "Zebrafish", "refseq_name": "ATP-sensitive inward rectifier potassium channel 15", "refseq_ac": "XP_005172631", "gene_names_uniprotkb": "kcnj15", "gene_names_refseq": "kcnj15", "protein_names_uniprotkb": "ATP-sensitive inward rectifier potassium channel 15", "protein_names_refseq": "ATP-sensitive inward rectifier potassium channel 15", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BJR1;A0AC58GKY6", "ec_number_list": "2.7.11.1;1.5.1.2", "go_molecular_function": "GO:0005242 inward rectifier potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0007399 nervous system development;GO:0034220 monoatomic ion transmembrane transport;GO:1990573 potassium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QQH0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQH4-1", "uniprot_id": "F1QQH4_DANRE", "mass": 38715.0, "length": 339, "protein_name": "Relaxin-3 receptor 1", "gene_name": "rxfp3.3a1", "organism": "Zebrafish", "refseq_name": "relaxin-3 receptor 1", "refseq_ac": "XP_005169010", "gene_names_uniprotkb": "rxfp3.3a1", "gene_names_refseq": "rxfp3.3a1", "protein_names_uniprotkb": "Relaxin-3 receptor 1; Relaxin family peptide receptor 3", "protein_names_refseq": "relaxin-3 receptor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100007598)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Receptor for RNL3/relaxin-3. Binding of the ligand inhibit cAMP accumulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGV7", "ec_number_list": "", "go_molecular_function": "GO:0016493 C-C chemokine receptor activity;GO:0019957 C-C chemokine binding", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0019722 calcium-mediated signaling;GO:0060326 cell chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QQH4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQK1-1", "uniprot_id": "F1QQK1_DANRE", "mass": 113189.0, "length": 1028, "protein_name": "Contactin-4 isoform X1", "gene_name": "cntn3a.1", "organism": "Zebrafish", "refseq_name": "contactin-4 isoform X1", "refseq_ac": "XP_697914", "gene_names_uniprotkb": "cntn3a.1", "gene_names_refseq": "cntn3a.1", "protein_names_uniprotkb": "Contactin-4 isoform X1", "protein_names_refseq": "contactin-4 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_697914.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TFE2", "ec_number_list": "", "go_molecular_function": "GO:0098632 cell-cell adhesion mediator activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030424 axon;GO:0045202 synapse;GO:0098552 side of membrane", "go_biological_process": "GO:0050808 synapse organization;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0007411 axon guidance;GO:0070593 dendrite self-avoidance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QQK1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQR2-1", "uniprot_id": "F1QQR2_DANRE", "mass": 41802.0, "length": 367, "protein_name": "Proteinase-activated receptor 3", "gene_name": "f2rl2", "organism": "Zebrafish", "refseq_name": "proteinase-activated receptor 3", "refseq_ac": "XP_005165306", "gene_names_uniprotkb": "f2rl2", "gene_names_refseq": "f2rl2", "protein_names_uniprotkb": "Proteinase-activated receptor 3", "protein_names_refseq": "proteinase-activated receptor 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100148468)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BCP2", "ec_number_list": "", "go_molecular_function": "GO:0015057 thrombin-activated receptor activity;GO:0008142 oxysterol binding;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QQR2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQT7-1", "uniprot_id": "F1QQT7_DANRE", "mass": 24195.0, "length": 211, "protein_name": "NEDD4 family-interacting protein 1 isoform X1", "gene_name": "ndfip1", "organism": "Zebrafish", "refseq_name": "NEDD4 family-interacting protein 1 isoform X1", "refseq_ac": "XP_005173157", "gene_names_uniprotkb": "ndfip1; wu:fc17e11; zgc:55546", "gene_names_refseq": "ndfip1; wu:fc17e11; zgc:55546", "protein_names_uniprotkb": "NEDD4 family-interacting protein 1 isoform X1", "protein_names_refseq": "NEDD4 family-interacting protein 1 isoform X1", "tax_id": 7955, "disease": "stroke (Disease Ontology:DOID:0051061)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BKD9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:0007034 vacuolar transport;GO:0031398 positive regulation of protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0030001 metal ion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QQT7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQZ6-1", "uniprot_id": "F1QQZ6_DANRE", "mass": 26049.0, "length": 234, "protein_name": "Collectrin precursor", "gene_name": "cltrn", "organism": "Zebrafish", "refseq_name": "collectrin precursor", "refseq_ac": "NP_001132930", "gene_names_uniprotkb": "cltrn; si:dkey-194e6.1; tmem27", "gene_names_refseq": "cltrn; si:dkey-194e6.1; tmem27", "protein_names_uniprotkb": "Collectrin precursor", "protein_names_refseq": "collectrin precursor; transmembrane protein 27", "tax_id": 7955, "disease": "", "pathway": " (dre:402976)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "24248357;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116613.1, EL647092.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB927370.1 and BC155583.1. On Nov 16, 2008 this sequence version replaced XP_001335222.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NLV3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0051957 positive regulation of amino acid transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QQZ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QR19-1", "uniprot_id": "F1QR19_DANRE", "mass": 63026.0, "length": 571, "protein_name": "Mediator of RNA polymerase II transcription subunit 1", "gene_name": "med1l", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 1-like", "refseq_ac": "NP_001018472", "gene_names_uniprotkb": "med1l; zgc:111976", "gene_names_refseq": "med1l; zgc:111976", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 1; Mediator complex subunit 1", "protein_names_refseq": "TRAP220; mediator of RNA polymerase II transcription subunit 1-like", "tax_id": 7955, "disease": "", "pathway": " (dre:553663); (R-DRE-383280); (R-DRE-400206); (R-DRE-9707564)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "17997606;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01044453.1, BC095630.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898400, SAMN18715719 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Sep 30, 2011 this sequence version replaced NP_001018472.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N6G4", "ec_number_list": "", "go_molecular_function": "GO:0042974 nuclear retinoic acid receptor binding;GO:0046966 nuclear thyroid hormone receptor binding;GO:0003712 transcription coregulator activity;GO:0042809 nuclear vitamin D receptor binding", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0097067 cellular response to thyroid hormone stimulus", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QR19-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QRD8-1", "uniprot_id": "F1QRD8_DANRE", "mass": 32046.0, "length": 282, "protein_name": "Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3", "gene_name": "alkbh3", "organism": "Zebrafish", "refseq_name": "alpha-ketoglutarate-dependent dioxygenase alkB homolog 3", "refseq_ac": "NP_001003511", "gene_names_uniprotkb": "alkbh3; im:6900103; zgc:91935", "gene_names_refseq": "alkbh3; im:6900103; zgc:91935", "protein_names_uniprotkb": "Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3; 1.14.11.33; 1.14.11.54; Alkylated DNA repair protein alkB homolog 3", "protein_names_refseq": "alkB, alkylation repair homolog 3; alpha-ketoglutarate-dependent dioxygenase alkB homolog 3", "tax_id": 7955, "disease": "", "pathway": " (dre:792266)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27189481;28924386;35277482", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078351.1, EV758461.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Sep 4, 2015 this sequence version replaced NP_001003511.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Dioxygenase that mediates demethylation of DNA and RNA containing 1-methyladenosine (m1A). Repairs alkylated DNA containing 1-methyladenosine (m1A) and 3-methylcytosine (m3C) by oxidative demethylation. Has a strong preference for single-stranded DNA. Able to process alkylated m3C within double-stranded regions via its interaction with ASCC3, which promotes DNA unwinding to generate single-stranded substrate needed for ALKBH3. Can repair exocyclic 3,N4-ethenocytosine adducs in single-stranded DNA. Also acts on RNA. Demethylates N(1)-methyladenosine (m1A) RNA, an epigenetic internal modification of messenger RNAs (mRNAs) highly enriched within 5'-untranslated regions (UTRs) and in the vicinity of start codons. Requires molecular oxygen, alpha-ketoglutarate and iron., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N1B3", "ec_number_list": "1.14.11.33;1.14.11.54", "go_molecular_function": "GO:0046872 metal ion binding;GO:1990930 mRNA N1-methyladenosine dioxygenase activity;GO:0035516 broad specificity oxidative DNA demethylase activity;GO:0051213 dioxygenase activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0006281 DNA repair;GO:0006307 DNA alkylation repair;GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QRD8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QRE0-1", "uniprot_id": "F1QRE0_DANRE", "mass": 49308.0, "length": 432, "protein_name": "Origin recognition complex subunit 4", "gene_name": "orc4", "organism": "Zebrafish", "refseq_name": "origin recognition complex subunit 4 isoform X1", "refseq_ac": "XP_005168754", "gene_names_uniprotkb": "orc4; fc50c03; wu:fc50c03; zgc:85772", "gene_names_refseq": "fc50c03; orc4; wu:fc50c03; zgc:85772", "protein_names_uniprotkb": "Origin recognition complex subunit 4", "protein_names_refseq": "origin recognition complex subunit 4 isoform X1", "tax_id": 7955, "disease": "Meier-Gorlin syndrome (Disease Ontology:DOID:0060306); Meier-Gorlin syndrome 2 (Disease Ontology:DOID:0080513)", "pathway": " (R-DRE-68616); (R-DRE-68689); (R-DRE-68949); (R-DRE-68962)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the origin recognition complex (ORC) that binds origins of replication., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BFZ9", "ec_number_list": "", "go_molecular_function": "GO:0003688 DNA replication origin binding;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005664 nuclear origin of replication recognition complex", "go_biological_process": "GO:0060271 cilium assembly;GO:0006270 DNA replication initiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QRE0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QRG0-1", "uniprot_id": "F1QRG0_DANRE", "mass": 108716.0, "length": 950, "protein_name": "Toll-like receptor 20, tandem duplicate 2", "gene_name": "tlr20.2", "organism": "Zebrafish", "refseq_name": "toll-like receptor 20, tandem duplicate 2", "refseq_ac": "NP_001170914", "gene_names_uniprotkb": "tlr20.2; TLR21.4a; tlr20a", "gene_names_refseq": "TLR21.4a; tlr20.2; tlr20a", "protein_names_uniprotkb": "Toll-like receptor 20, tandem duplicate 2", "protein_names_refseq": "toll-like receptor 20 a; toll-like receptor 20, tandem duplicate 2; toll-like receptor 20a", "tax_id": 7955, "disease": "", "pathway": " (dre:403140)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "14687933;14687934;16552074;18248169;23880453;24327191;26743178;34130754", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: SRR32588728.29403640.1, SRR32588727.798606.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Oct 24, 2015 this sequence version replaced NP_001170914.1., [RefSeq]; Tlr20 has a role in the immune response of the teleost fishes to protozoan parasites. [Tlr20], [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NU69", "ec_number_list": "", "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006954 inflammatory response;GO:0045087 innate immune response;GO:0002224 toll-like receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1QRG0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QRP8-1", "uniprot_id": "F1QRP8_DANRE", "mass": 51837.0, "length": 474, "protein_name": "Aspartyl aminopeptidase", "gene_name": "dnpep", "organism": "Zebrafish", "refseq_name": "aspartyl aminopeptidase isoform X1", "refseq_ac": "XP_005165919", "gene_names_uniprotkb": "dnpep; zgc:55944", "gene_names_refseq": "dnpep; zgc:55944", "protein_names_uniprotkb": "Aspartyl aminopeptidase; 3.4.11.21", "protein_names_refseq": "aspartyl aminopeptidase isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BD52", "ec_number_list": "", "go_molecular_function": "GO:0008237 metallopeptidase activity;GO:0008270 zinc ion binding;GO:0004177 aminopeptidase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QRP8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QRT4-1", "uniprot_id": "F1QRT4_DANRE", "mass": 59452.0, "length": 533, "protein_name": "5'-AMP-activated protein kinase subunit gamma-1 isoform X1", "gene_name": "prkag2b", "organism": "Zebrafish", "refseq_name": "5'-AMP-activated protein kinase subunit gamma-1 isoform X1", "refseq_ac": "XP_696730", "gene_names_uniprotkb": "prkag2b", "gene_names_refseq": "prkag2b", "protein_names_uniprotkb": "5'-AMP-activated protein kinase subunit gamma-1 isoform X1", "protein_names_refseq": "5'-AMP-activated protein kinase subunit gamma-1 isoform X1", "tax_id": 7955, "disease": "lethal congenital glycogen storage disease of heart (Disease Ontology:DOID:0090101); hypertrophic cardiomyopathy 6 (Disease Ontology:DOID:0110312); glycogen storage disease (Disease Ontology:DOID:2747); Wolff-Parkinson-White syndrome (Disease Ontology:DOID:384)", "pathway": " (dre:568316); (R-DRE-1632852); (R-DRE-163680); (R-DRE-380972); (R-DRE-5628897); (R-DRE-6804756)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_696730.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UW19", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0019901 protein kinase binding;GO:0016208 AMP binding;GO:0019887 protein kinase regulator activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0031588 nucleotide-activated protein kinase complex", "go_biological_process": "GO:0006110 regulation of glycolytic process;GO:0006633 fatty acid biosynthetic process;GO:0042149 cellular response to glucose starvation;GO:0045722 positive regulation of gluconeogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QRT4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QRY4-1", "uniprot_id": "F1QRY4_DANRE", "mass": 31043.0, "length": 269, "protein_name": "TIP41-like protein", "gene_name": "tiprl", "organism": "Zebrafish", "refseq_name": "TIP41-like protein", "refseq_ac": "NP_001315355", "gene_names_uniprotkb": "tiprl; zgc:66327", "gene_names_refseq": "tiprl; zgc:66327", "protein_names_uniprotkb": "TIP41-like protein", "protein_names_refseq": "TIP41-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:393636)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "21187971;22841785;26469318;27189481;33618456", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395017.1016234.1, SRR26395064.1074674.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jun 16, 2016 this sequence version replaced XP_005172623.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4V0;A0AC58GIY2", "ec_number_list": "", "go_molecular_function": "GO:0072542 protein phosphatase activator activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0031929 TOR signaling;GO:0043009 chordate embryonic development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QRY4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QS24-1", "uniprot_id": "F1QS24_DANRE", "mass": 196670.0, "length": 1726, "protein_name": "Lymphocyte antigen 75", "gene_name": "ly75", "organism": "Zebrafish", "refseq_name": "lymphocyte antigen 75", "refseq_ac": "XP_009304139", "gene_names_uniprotkb": "ly75", "gene_names_refseq": "ly75", "protein_names_uniprotkb": "Lymphocyte antigen 75", "protein_names_refseq": "lymphocyte antigen 75", "tax_id": 7955, "disease": "", "pathway": " (dre:504036)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3BDJ8", "ec_number_list": "", "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006898 receptor-mediated endocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QS24-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QS28-1", "uniprot_id": "F1QS28_DANRE", "mass": 31994.0, "length": 305, "protein_name": "Heterogeneous nuclear ribonucleoprotein A0a", "gene_name": "hnrnpa0a", "organism": "Zebrafish", "refseq_name": "heterogeneous nuclear ribonucleoprotein A0a", "refseq_ac": "NP_997810", "gene_names_uniprotkb": "hnrnpa0a; fc01g05; wu:fc01g05; zgc:77366", "gene_names_refseq": "fc01g05; hnrnpa0a; wu:fc01g05; zgc:77366", "protein_names_uniprotkb": "Heterogeneous nuclear ribonucleoprotein A0a", "protein_names_refseq": "heterogeneous nuclear ribonucleoprotein A0a", "tax_id": 7955, "disease": "gastric adenocarcinoma (Disease Ontology:DOID:3717)", "pathway": " (dre:323529)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;30324621;31227602;32296464", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC050173.1, SRR26395012.598915.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1, BC066672.1 and CN506711.1. On Feb 11, 2016 this sequence version replaced NP_997810.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHT9", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding;GO:0003730 mRNA 3'-UTR binding", "go_cellular_component": "GO:0005634 nucleus;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0070935 3'-UTR-mediated mRNA stabilization", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QS28-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QS85-1", "uniprot_id": "F1QS85_DANRE", "mass": 29533.0, "length": 265, "protein_name": "3.1.26.5; Ribonuclease P protein subunit p38", "gene_name": "rpp38", "organism": "Zebrafish", "refseq_name": "ribonuclease P protein subunit p38", "refseq_ac": "NP_001002525", "gene_names_uniprotkb": "rpp38; fc10d08; wu:fc10d08; zgc:92924", "gene_names_refseq": "fc10d08; rpp38; wu:fc10d08; zgc:92924", "protein_names_uniprotkb": "3.1.26.5; Ribonuclease P protein subunit p38", "protein_names_refseq": "ribonuclease P protein subunit p38", "tax_id": 7955, "disease": "", "pathway": " (dre:436798); (R-DRE-6791226)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "16998185;27189481;29969449", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01033646.1, BC076374.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476754, SAMEA4476757 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Dec 16, 2010 this sequence version replaced NP_001002525.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0K8", "ec_number_list": "2.7.11.1;3.1.26.5", "go_molecular_function": "GO:0004526 ribonuclease P activity;GO:0033204 ribonuclease P RNA binding", "go_cellular_component": "GO:0005655 nucleolar ribonuclease P complex;GO:0030681 multimeric ribonuclease P complex;GO:0001650 fibrillar center;GO:0000172 ribonuclease MRP complex", "go_biological_process": "GO:0001682 tRNA 5'-leader removal", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QS85-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSA2-1", "uniprot_id": "F1QSA2_DANRE", "mass": 41898.0, "length": 374, "protein_name": "Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1", "gene_name": "hsd3b1", "organism": "Zebrafish", "refseq_name": "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1", "refseq_ac": "NP_001373226", "gene_names_uniprotkb": "hsd3b1; si:rp71-68n21.10", "gene_names_refseq": "3bhsd1; hsd3b1; si:rp71-68n21.10", "protein_names_uniprotkb": "Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1", "protein_names_refseq": "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763)", "pathway": " (dre:553532); (R-DRE-193048); (R-DRE-193993); (R-DRE-194002)", "pathway_count": 4, "publication_count": 9, "publication_id_list": "25974401;27333837;28202512;28645700;33724412;34932120;35139421;35225789;35588359", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC074074.1, SRR32588717.16231031.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Aug 19, 2020 this sequence version replaced XP_694204.3. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Zebrafish hsd3b1(Dre 9) functions like mammalian HSD3B2, whose deficiency leads to congenital adrenal hyperplasia. Erratum:[Endocrinology. 2016 Feb;157(2):978. doi: 10.1210/en.2015-2019. PMID: 26751101], [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TFA8", "ec_number_list": "", "go_molecular_function": "GO:0003854 3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity;GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "go_cellular_component": "GO:0031966 mitochondrial membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006694 steroid biosynthetic process;GO:0043473 pigmentation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F1QSA2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSA8-1", "uniprot_id": "F1QSA8_DANRE", "mass": 39118.0, "length": 347, "protein_name": "Galanin receptor type 1", "gene_name": "galr1a", "organism": "Zebrafish", "refseq_name": "galanin receptor type 1", "refseq_ac": "XP_696215", "gene_names_uniprotkb": "galr1a", "gene_names_refseq": "galr1a", "protein_names_uniprotkb": "Galanin receptor type 1", "protein_names_refseq": "galanin receptor type 1", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742); opioid abuse (Disease Ontology:DOID:11206); opiate dependence (Disease Ontology:DOID:2559)", "pathway": " (dre:567820); (R-DRE-375276); (R-DRE-418594)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Receptor for the hormone galanin. The activity of this receptor is mediated by G proteins that inhibit adenylate cyclase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TFH8", "ec_number_list": "", "go_molecular_function": "GO:0004966 galanin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0007218 neuropeptide signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QSA8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSB8-1", "uniprot_id": "F1QSB8_DANRE", "mass": 99703.0, "length": 908, "protein_name": "ATP-dependent RNA helicase DDX42", "gene_name": "ddx42", "organism": "Zebrafish", "refseq_name": "ATP-dependent RNA helicase DDX42", "refseq_ac": "NP_001032894", "gene_names_uniprotkb": "ddx42; im:7148194; si:dkey-15n1.10; zgc:111815", "gene_names_refseq": "ddx42; im:7148194; si:dkey-15n1.10; zgc:111815", "protein_names_uniprotkb": "ATP-dependent RNA helicase DDX42; 3.6.4.13; DEAD box protein 42", "protein_names_refseq": "ATP-dependent RNA helicase DDX42; DEAD (Asp-Glu-Ala-Asp) box polypeptide 42; dead box 42 protein", "tax_id": 7955, "disease": "myelodysplastic syndrome (Disease Ontology:DOID:0050908)", "pathway": " (dre:503932); (R-DRE-72165); (R-DRE-9770562); (R-DRE-9943411)", "pathway_count": 4, "publication_count": 6, "publication_id_list": "17490614;18307296;20438705;22295061;26469318;29942316", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01008467.1, SRR32588723.1518496.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Aug 6, 2010 this sequence version replaced NP_001032894.1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N856", "ec_number_list": "2.3.2.-;2.3.2.27;3.6.4.-;4.2.99.18;5.6.2.4;5.6.2.3;3.6.4.12;3.6.4.13;2.7.7.6;3.1.3.16;2.7.4.3;7.6.2.2;5.6.1.6;7.6.2.3;3.6.1.5;3.6.4.6;3.6.1.15;3.6.4.10;2.7.7.19;5.6.2.-;2.7.1.78;2.7.7.7;2.7.7.49;5.6.2.5;3.6.5.-;2.7.7.52;3.6.1.-", "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0003724 RNA helicase activity;GO:0004386 helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QSB8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSI6-1", "uniprot_id": "F1QSI6_DANRE", "mass": 40444.0, "length": 386, "protein_name": "Single-stranded DNA-binding protein 4", "gene_name": "ssbp4", "organism": "Zebrafish", "refseq_name": "single-stranded DNA-binding protein 4", "refseq_ac": "NP_001189441", "gene_names_uniprotkb": "ssbp4; si:ch211-202n20.1; ssbp; wu:fb33f07", "gene_names_refseq": "si:ch211-202n20.1; ssbp4; ssbp; wu:fb33f07", "protein_names_uniprotkb": "Single-stranded DNA-binding protein 4", "protein_names_refseq": "single-stranded DNA-binding protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:321750)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC068380.1, GFIL01039769.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Feb 4, 2011 this sequence version replaced XP_001922629.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NYZ2", "ec_number_list": "", "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1QSI6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSL6-1", "uniprot_id": "F1QSL6_DANRE", "mass": 34457.0, "length": 297, "protein_name": "F-box only protein 44", "gene_name": "fbxo44.1", "organism": "Zebrafish", "refseq_name": "F-box only protein 44", "refseq_ac": "NP_001008577", "gene_names_uniprotkb": "fbxo44.1; fbxo44; wu:fa08a01; wu:fb70d05; zgc:92285", "gene_names_refseq": "fbxo44.1; fbxo44; wu:fa08a01; wu:fb70d05; zgc:92285", "protein_names_uniprotkb": "F-box only protein 44", "protein_names_refseq": "F-box only protein 44; F-box protein 44", "tax_id": 7955, "disease": "", "pathway": " (dre:494034); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "15520368;16109975;18335061;24683187;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC086967.1, SRR26395064.1164532.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1, EH586784.1 and BC086967.1. On or before Oct 29, 2015 this sequence version replaced XP_005162126.1, NP_001008577.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N3I3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0036503 ERAD pathway;GO:0006516 glycoprotein catabolic process;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QSL6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSM3-1", "uniprot_id": "F1QSM3_DANRE", "mass": 56572.0, "length": 491, "protein_name": "Cytochrome P450 2X7", "gene_name": "cyp2x7", "organism": "Zebrafish", "refseq_name": "cytochrome P450 2X7", "refseq_ac": "NP_001243106", "gene_names_uniprotkb": "cyp2x7", "gene_names_refseq": "cyp2x7", "protein_names_uniprotkb": "Cytochrome P450 2X7", "protein_names_refseq": "cytochrome P450 2X7", "tax_id": 7955, "disease": "", "pathway": " (dre:402847)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "21087487;21116621;27189481;28411468;36257818", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053412.1, GFIL01007983.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1, EH500326.1 and EH526567.1. On or before Jan 12, 2012 this sequence version replaced XP_003201476.1, XP_002666864.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4A7", "ec_number_list": "", "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006805 xenobiotic metabolic process;GO:0006082 organic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QSM3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSQ4-1", "uniprot_id": "F1QSQ4_DANRE", "mass": 24752.0, "length": 214, "protein_name": "GRB2 related adaptor protein b", "gene_name": "grapb", "organism": "Zebrafish", "refseq_name": "GRB2 related adaptor protein b", "refseq_ac": "NP_001025251", "gene_names_uniprotkb": "grapb; si:dkeyp-9d4.1; zgc:109892", "gene_names_refseq": "grapb; si:dkeyp-9d4.1; zgc:109892", "protein_names_uniprotkb": "GRB2 related adaptor protein b", "protein_names_refseq": "GRB2 related adaptor protein b", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 114 (Disease Ontology:DOID:0111642)", "pathway": " (dre:555184)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "25670796;27189481;28252024;38058169", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01011925.1, SRR32588730.16871565.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476771 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Oct 9, 2016 this sequence version replaced NP_001025251.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N729", "ec_number_list": "", "go_molecular_function": "GO:0001784 phosphotyrosine residue binding;GO:0005154 epidermal growth factor receptor binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0007165 signal transduction;GO:0043408 regulation of MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QSQ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSR3-1", "uniprot_id": "F1QSR3_DANRE", "mass": 111958.0, "length": 1020, "protein_name": "Tenascin-N isoform X1", "gene_name": "tnn", "organism": "Zebrafish", "refseq_name": "tenascin-N isoform X1", "refseq_ac": "XP_005171321", "gene_names_uniprotkb": "tnn; tenw; tnw; zgc:110729", "gene_names_refseq": "tenw; tnn; tnw; zgc:110729", "protein_names_uniprotkb": "Tenascin-N isoform X1", "protein_names_refseq": "tenascin-N isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:30234); (R-DRE-3000178)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "10027569;14709716;16109975;16448862;23922799;26469318;27189481;33603752;34088109;37884489", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BIJ7", "ec_number_list": "", "go_molecular_function": "GO:0005178 integrin binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "GO:0007160 cell-matrix adhesion;GO:1990138 neuron projection extension", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QSR3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QSX6-1", "uniprot_id": "F1QSX6_DANRE", "mass": 145401.0, "length": 1320, "protein_name": "Bile salt export pump", "gene_name": "abcb11a", "organism": "Zebrafish", "refseq_name": "bile salt export pump", "refseq_ac": "XP_009303249", "gene_names_uniprotkb": "abcb11a", "gene_names_refseq": "abcb11a", "protein_names_uniprotkb": "Bile salt export pump", "protein_names_refseq": "bile salt export pump", "tax_id": 7955, "disease": "progressive familial intrahepatic cholestasis 2 (Disease Ontology:DOID:0070222); benign recurrent intrahepatic cholestasis 2 (Disease Ontology:DOID:0070232); intrahepatic cholestasis (Disease Ontology:DOID:1852); liver cirrhosis (Disease Ontology:DOID:5082)", "pathway": " (dre:797269); (R-DRE-159418); (R-DRE-193368)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_009303249.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B5W0;A0AC58GHQ6", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0015126 canalicular bile acid transmembrane transporter activity;GO:0015432 ABC-type bile acid transporter activity;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0016324 apical plasma membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0015722 canalicular bile acid transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QSX6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QT18-1", "uniprot_id": "F1QT18_DANRE", "mass": 51140.0, "length": 435, "protein_name": "Tubulin--tyrosine ligase-like protein 9", "gene_name": "ttll9", "organism": "Zebrafish", "refseq_name": "probable tubulin polyglutamylase TTLL9", "refseq_ac": "NP_001243693", "gene_names_uniprotkb": "ttll9; fb75c08; si:dkey-211h10.2; wu:fb75c08", "gene_names_refseq": "fb75c08; si:dkey-211h10.2; ttll9; wu:fb75c08", "protein_names_uniprotkb": "Tubulin--tyrosine ligase-like protein 9", "protein_names_refseq": "probable tubulin polyglutamylase TTLL9", "tax_id": 7955, "disease": "", "pathway": " (dre:556794)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "21262966;26469318;27189481;36414642;39147717", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01765705, SAMN18715719 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB915998.1 and BC115266.1. On or before Feb 19, 2012 this sequence version replaced XP_684786.4, XP_003201225.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4L6", "ec_number_list": "", "go_molecular_function": "GO:0070740 tubulin-glutamic acid ligase activity;GO:0005524 ATP binding;GO:0015631 tubulin binding;GO:0016874 ligase activity", "go_cellular_component": "GO:0036064 ciliary basal body", "go_biological_process": "GO:0000226 microtubule cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QT18-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QT23-1", "uniprot_id": "F1QT23_DANRE", "mass": 35201.0, "length": 317, "protein_name": "Retinol dehydrogenase", "gene_name": "rdh8b", "organism": "Zebrafish", "refseq_name": "retinol dehydrogenase 8b", "refseq_ac": "NP_957082", "gene_names_uniprotkb": "rdh8b; rdh8l; zfprRDH1; zgc:73320", "gene_names_refseq": "rdh8b; rdh8l; zfprRDH1; zgc:73320", "protein_names_uniprotkb": "Retinol dehydrogenase; 1.1.1.300", "protein_names_refseq": "retinol dehydrogenase 8 like; retinol dehydrogenase 8b; zf 1.3", "tax_id": 7955, "disease": "", "pathway": " (dre:393761)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15026171;16938888;17467981;20382160;27189481;36934645", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01032487.1, SRR32588731.87469.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On or before Jun 16, 2016 this sequence version replaced XP_005168462.1, NP_957082.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinal to all-trans-retinol. May play a role in the regeneration of visual pigment at high light intensity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PF16", "ec_number_list": "1.1.1.300", "go_molecular_function": "GO:0004745 all-trans-retinol dehydrogenase (NAD+) activity;GO:0004303 estradiol 17-beta-dehydrogenase [NAD(P)+] activity;GO:0052650 all-trans-retinol dehydrogenase (NADP+) activity", "go_cellular_component": "GO:0005829 cytosol;GO:0016020 membrane", "go_biological_process": "GO:0042572 retinol metabolic process;GO:0006703 estrogen biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QT23-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QT73-1", "uniprot_id": "F1QT73_DANRE", "mass": 52000.0, "length": 462, "protein_name": "Disks large-associated protein 2-like", "gene_name": "LOC110437706", "organism": "Zebrafish", "refseq_name": "disks large-associated protein 2-like", "refseq_ac": "XP_021324281", "gene_names_uniprotkb": "LOC110437706", "gene_names_refseq": "LOC110437706", "protein_names_uniprotkb": "Disks large-associated protein 2-like", "protein_names_refseq": "disks large-associated protein 2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:110437706)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PPU7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0023052 signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QT73-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QTC6-1", "uniprot_id": "F1QTC6_DANRE", "mass": 59644.0, "length": 521, "protein_name": "Prolyl 3-hydroxylase OGFOD1", "gene_name": "ogfod1", "organism": "Zebrafish", "refseq_name": "prolyl 3-hydroxylase OGFOD1", "refseq_ac": "NP_955983", "gene_names_uniprotkb": "ogfod1; D63; wu:fc33b08; zgc:66379", "gene_names_refseq": "D63; ogfod1; wu:fc33b08; zgc:66379", "protein_names_uniprotkb": "Prolyl 3-hydroxylase OGFOD1; 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1; uS12 prolyl 3-hydroxylase", "protein_names_refseq": "prolyl 3-hydroxylase OGFOD1", "tax_id": 7955, "disease": "", "pathway": " (dre:324573); (R-DRE-9629569)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "16109975;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055624.1, GDQH01002524.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1, EH542776.1 and EH558754.1. On Jan 28, 2016 this sequence version replaced NP_955983.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Prolyl 3-hydroxylase that catalyzes 3-hydroxylation of 'Pro-62' of small ribosomal subunit uS12 (RPS23), thereby regulating protein translation termination efficiency. Involved in stress granule formation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PED0", "ec_number_list": "", "go_molecular_function": "GO:0005506 iron ion binding;GO:0031418 L-ascorbic acid binding;GO:0031543 peptidyl-proline dioxygenase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006449 regulation of translational termination", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QTC6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6P8Y5-1", "uniprot_id": "F6P8Y5_DANRE", "mass": 114451.0, "length": 1016, "protein_name": "Mitotic deacetylase associated SANT domain protein a isoform X1", "gene_name": "mideasa", "organism": "Zebrafish", "refseq_name": "mitotic deacetylase associated SANT domain protein a isoform X1", "refseq_ac": "XP_005160646", "gene_names_uniprotkb": "mideasa; elmsan1a; si:dkey-12h9.13", "gene_names_refseq": "elmsan1a; mideasa; si:dkey-12h9.13", "protein_names_uniprotkb": "Mitotic deacetylase associated SANT domain protein a isoform X1", "protein_names_refseq": "mitotic deacetylase associated SANT domain protein a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569908)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;25556858;26469318;27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B7P9;A0AC58I4Q4", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005667 transcription regulator complex;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F6P8Y5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QTJ6-1", "uniprot_id": "F1QTJ6_DANRE", "mass": 29802.0, "length": 269, "protein_name": "Homeobox protein HMX2", "gene_name": "hmx2", "organism": "Zebrafish", "refseq_name": "homeobox protein HMX2", "refseq_ac": "NP_001108570", "gene_names_uniprotkb": "hmx2", "gene_names_refseq": "hmx2", "protein_names_uniprotkb": "Homeobox protein HMX2", "protein_names_refseq": "homeobox protein HMX2; homeobox transcription factor Hmx2; nkx5.2", "tax_id": 7955, "disease": "", "pathway": " (dre:555632)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "20043901;20112453;20974120;21831919;24176858;31022185;33077489;37642135;38017520;38165177", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CR931347.1, GDQH01027994.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476803 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On or before Jul 29, 2017 this sequence version replaced XP_005158750.1, NP_001108570.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Hmx2 acts as cell autonomous factors required redundantly for cell fate specification and differentiation during inner ear and lateral line development, [RefSeq, PubMed]; Transcription factor involved in specification of neuronal cell types and which is required for inner ear and hypothalamus development. Binds to the 5'-CAAGTG-3' core sequence., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NG36;A0A8M2B553", "ec_number_list": "", "go_molecular_function": "GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development;GO:0030154 cell differentiation;GO:0042472 inner ear morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QTJ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QTL0-1", "uniprot_id": "F1QTL0_DANRE", "mass": 34946.0, "length": 306, "protein_name": "1.14.99.1; Phosducin-like protein", "gene_name": "pdcl", "organism": "Zebrafish", "refseq_name": "phosducin-like protein", "refseq_ac": "NP_955941", "gene_names_uniprotkb": "pdcl; fc06a08; im:6793474; wu:fc06a08; zgc:73264", "gene_names_refseq": "fc06a08; im:6793474; pdcl; wu:fc06a08; zgc:73264", "protein_names_uniprotkb": "1.14.99.1; Phosducin-like protein", "protein_names_refseq": "phosducin-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:323645); (R-DRE-6814122)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;26559940;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01029783.1, SRR32588724.77753.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476764 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH546236.1 and JBMGRA010000021.1. On Jul 14, 2011 this sequence version replaced NP_955941.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFM0;X1WDC6", "ec_number_list": "2.7.11.1;1.14.99.1", "go_molecular_function": "GO:0004666 prostaglandin-endoperoxide synthase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007601 visual perception;GO:1902605 heterotrimeric G-protein complex assembly;GO:0008277 regulation of G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QTL0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QTS2-1", "uniprot_id": "F1QTS2_DANRE", "mass": 33764.0, "length": 301, "protein_name": "Transcription elongation factor", "gene_name": "tcea2", "organism": "Zebrafish", "refseq_name": "transcription elongation factor A protein 2", "refseq_ac": "NP_957280", "gene_names_uniprotkb": "tcea2; zgc:56325", "gene_names_refseq": "tcea2; zgc:56325", "protein_names_uniprotkb": "Transcription elongation factor", "protein_names_refseq": "transcription elongation factor A protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:393961)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;31680844", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046074.1, GFIL01040514.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505374 [ECO:0000350] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1, EH452133.1, EH458327.1 and EH477932.1. On Aug 27, 2015 this sequence version replaced NP_957280.1., [RefSeq]; Necessary for efficient RNA polymerase II transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by S-II allows the resumption of elongation from the new 3'-terminus., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PDT9", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003746 translation elongation factor activity;GO:0003711 transcription elongation factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006368 transcription elongation by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QTS2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QTX0-1", "uniprot_id": "F1QTX0_DANRE", "mass": 59001.0, "length": 553, "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3", "gene_name": "pdzk1", "organism": "Zebrafish", "refseq_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3", "refseq_ac": "NP_001122142", "gene_names_uniprotkb": "pdzk1; cb1074; pdzk1l; wu:fa55e12; wu:fb65e01", "gene_names_refseq": "cb1074; pdzk1l; pdzk1; wu:fa55e12; wu:fb65e01", "protein_names_uniprotkb": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3", "protein_names_refseq": "Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain containing 1 like", "tax_id": 7955, "disease": "", "pathway": " (dre:337325)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16109975;16531124;16574097;17953490;19646228;30349665;31188030;33749720;35364135;37853267", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC151882.1, SRR32588725.17710482.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Jun 25, 2025 this sequence version replaced NP_001122142.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI88", "ec_number_list": "", "go_molecular_function": "GO:0005102 signaling receptor binding;GO:0043495 protein-membrane adaptor activity", "go_cellular_component": "GO:0016324 apical plasma membrane", "go_biological_process": "GO:0072659 protein localization to plasma membrane", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QTX0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QTX6-1", "uniprot_id": "F1QTX6_DANRE", "mass": 35091.0, "length": 324, "protein_name": "Carbonic anhydrase", "gene_name": "wu:fj17g10", "organism": "Zebrafish", "refseq_name": "zgc:153760 isoform X1", "refseq_ac": "XP_005169497", "gene_names_uniprotkb": "wu:fj17g10; zgc:153760", "gene_names_refseq": "wu:fj17g10; zgc:153760", "protein_names_uniprotkb": "Carbonic anhydrase; 4.2.1.1", "protein_names_refseq": "zgc:153760 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Reversible hydration of carbon dioxide., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGS0", "ec_number_list": "4.2.1.1", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004089 carbonate dehydratase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QTX6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QU35-1", "uniprot_id": "F1QU35_DANRE", "mass": 55217.0, "length": 505, "protein_name": "26S proteasome non-ATPase regulatory subunit 5", "gene_name": "psmd5", "organism": "Zebrafish", "refseq_name": "26S proteasome non-ATPase regulatory subunit 5", "refseq_ac": "NP_001017573", "gene_names_uniprotkb": "psmd5; im:7137623; zgc:110116", "gene_names_refseq": "im:7137623; psmd5; zgc:110116", "protein_names_uniprotkb": "26S proteasome non-ATPase regulatory subunit 5", "protein_names_refseq": "26S proteasome non-ATPase regulatory subunit 5; proteasome (prosome, macropain) 26S subunit, non-ATPase, 5; proteasome 26S non-ATPase subunit 5", "tax_id": 7955, "disease": "", "pathway": " (dre:550235); (R-DRE-9907900)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076043.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB971162.1, BC076043.1 and BC092738.1. On Oct 31, 2008 this sequence version replaced NP_001017573.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5A3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000502 proteasome complex", "go_biological_process": "GO:0043248 proteasome assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1QU35-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QUD8-1", "uniprot_id": "F1QUD8_DANRE", "mass": 12409.0, "length": 109, "protein_name": "Stem cell protein", "gene_name": "tal2", "organism": "Zebrafish", "refseq_name": "T-cell acute lymphocytic leukemia protein 2", "refseq_ac": "NP_958496", "gene_names_uniprotkb": "tal2; zgc:111884", "gene_names_refseq": "tal2; zgc:111884", "protein_names_uniprotkb": "Stem cell protein", "protein_names_refseq": "T-cell acute lymphocytic leukemia protein 2", "tax_id": 7955, "disease": "adult T-cell leukemia/lymphoma (Disease Ontology:DOID:0050523); acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:394239); (R-DRE-8939236)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "14678833;15582776;17045256;18713863;19449054;29651232;29757409;30760481;35623404;36063149", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01040386.1, EH434181.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Jun 25, 2025 this sequence version replaced NP_958496.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Tal2 is required for generation of GABAergic neurons in the zebrafish midbrain., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PJA4", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007420 brain development;GO:0021514 ventral spinal cord interneuron differentiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QUD8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QUP1-1", "uniprot_id": "RPZ_DANRE", "mass": 26604.0, "length": 227, "protein_name": "Protein rapunzel", "gene_name": "rpz", "organism": "Zebrafish", "refseq_name": "protein rapunzel", "refseq_ac": "NP_001138710", "gene_names_uniprotkb": "rpz", "gene_names_refseq": "rpz", "protein_names_uniprotkb": "Protein rapunzel", "protein_names_refseq": "protein rapunzel; rap", "tax_id": 7955, "disease": "", "pathway": " (dre:100002737)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "12871703;19632218;23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: FJ539169.1, CO933551.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from FJ539169.1. On Feb 18, 2009 this sequence version replaced XP_001339320.1., [RefSeq]; The first gene identification for a mutation affecting segment number in the zebrafish fin and development of both the fin ray (dermal) and the axial skeleton., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9VEN0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0033333 fin development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QUP1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QUP2-1", "uniprot_id": "F1QUP2_DANRE", "mass": 32521.0, "length": 293, "protein_name": "Estradiol 17-beta-dehydrogenase", "gene_name": "hsd17b1", "organism": "Zebrafish", "refseq_name": "17-beta-hydroxysteroid dehydrogenase type 1", "refseq_ac": "NP_991147", "gene_names_uniprotkb": "hsd17b1", "gene_names_refseq": "hsd17b1", "protein_names_uniprotkb": "Estradiol 17-beta-dehydrogenase; 1.1.1.62", "protein_names_refseq": "17-beta hydroxysteroid dehydrogenase; 17-beta-hydroxysteroid dehydrogenase type 1; zf 1.2", "tax_id": 7955, "disease": "invasive ductal carcinoma (Disease Ontology:DOID:3008)", "pathway": " (dre:402842); (R-DRE-193144)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "15026171;16700073;17467981;18335061;19111899;33412467;33652099;35588359;36305237;38984720", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY306005.1, BC163709.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715719 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 25, 2025 this sequence version replaced NP_991147.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; A role for G143 in zebrafish 17beta-HSD 1 and M146 and M147 in the two zebrafish paralogs prRDH 1 and prRDH 2, respectively, in substrate specificity., [RefSeq, PubMed]; Favors the reduction of estrogens and androgens. Uses preferentially NADH., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PPS5", "ec_number_list": "1.1.1.270;1.1.1.62;1.1.1.330", "go_molecular_function": "GO:0016229 steroid dehydrogenase activity;GO:0004303 estradiol 17-beta-dehydrogenase [NAD(P)+] activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0006703 estrogen biosynthetic process;GO:0008209 androgen metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QUP2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QUQ0-1", "uniprot_id": "F1QUQ0_DANRE", "mass": 109911.0, "length": 983, "protein_name": "isoleucine--tRNA ligase", "gene_name": "iars2", "organism": "Zebrafish", "refseq_name": "isoleucine--tRNA ligase, mitochondrial", "refseq_ac": "NP_001157270", "gene_names_uniprotkb": "iars2; si:ch211-214p16.3; si:zc214p16.3", "gene_names_refseq": "iars2; si:ch211-214p16.3; si:zc214p16.3", "protein_names_uniprotkb": "isoleucine--tRNA ligase; 6.1.1.5; Isoleucyl-tRNA synthetase", "protein_names_refseq": "isoleucine tRNA synthetase; isoleucine--tRNA ligase, mitochondrial; isoleucine-tRNA synthetase 2, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:100001219)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16517001;26469318;28252024;34733844", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01013694.1, GDQQ01034285.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000017.1. On Jun 7, 2025 this sequence version replaced NP_001157270.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NS03", "ec_number_list": "", "go_molecular_function": "GO:0002161 aminoacyl-tRNA deacylase activity;GO:0004822 isoleucine-tRNA ligase activity;GO:0005524 ATP binding;GO:0000049 tRNA binding", "go_cellular_component": "GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0006428 isoleucyl-tRNA aminoacylation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QUQ0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QV06-1", "uniprot_id": "F1QV06_DANRE", "mass": 67084.0, "length": 594, "protein_name": "T-box transcription factor TBX3", "gene_name": "tbx3b", "organism": "Zebrafish", "refseq_name": "T-box transcription factor TBX3", "refseq_ac": "XP_002662050", "gene_names_uniprotkb": "tbx3b", "gene_names_refseq": "tbx3b", "protein_names_uniprotkb": "T-box transcription factor TBX3", "protein_names_refseq": "T-box transcription factor TBX3", "tax_id": 7955, "disease": "ulnar-mammary syndrome (Disease Ontology:DOID:0060614); stomach cancer (Disease Ontology:DOID:10534); ovarian cancer (Disease Ontology:DOID:2394); hepatocellular carcinoma (Disease Ontology:DOID:684); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:100334188)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002662050.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RH80", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0001708 cell fate specification;GO:0060429 epithelium development;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QV06-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QV31-1", "uniprot_id": "F1QV31_DANRE", "mass": 59178.0, "length": 566, "protein_name": "Keratin, type II cytoskeletal 5", "gene_name": "krt5", "organism": "Zebrafish", "refseq_name": "keratin, type II cytoskeletal 5", "refseq_ac": "NP_571231", "gene_names_uniprotkb": "krt5; ckii; wu:fb02h09; wu:fj02d02; wu:fk78b12; zfCKII", "gene_names_refseq": "ckii; krt5; wu:fb02h09; wu:fj02d02; wu:fk78b12; zfCKII", "protein_names_uniprotkb": "Keratin, type II cytoskeletal 5", "protein_names_refseq": "keratin, type II cytoskeletal 5; type II cytokeratin", "tax_id": 7955, "disease": "white sponge nevus (Disease Ontology:DOID:0050448); pachyonychia congenita (Disease Ontology:DOID:0050449); Dowling-Degos disease (Disease Ontology:DOID:0060256); generalized severe epidermolysis bullosa simplex 1A (Disease Ontology:DOID:0060735); bullous congenital ichthyosiform erythroderma (Disease Ontology:DOID:0060877); KRT1-related nonepidermolytic palmoplantar keratoderma (Disease Ontology:DOID:0070550); epidermolytic palmoplantar keratoderma 2 (Disease Ontology:DOID:0070551); Meesmann corneal dystrophy 2 (Disease Ontology:DOID:0080671); keratosis palmoplantaris striata 3 (Disease Ontology:DOID:0081110); white sponge nevus 1 (Disease Ontology:DOID:0081287); epidermolytic hyperkeratosis 1 (Disease Ontology:DOID:0081358); hypotrichosis 3 (Disease Ontology:DOID:0110700); hypotrichosis 13 (Disease Ontology:DOID:0110710); epidermolysis bullosa simplex 2F with mottled pigmentation (Disease Ontology:DOID:0111346); autosomal dominant woolly hair (Disease Ontology:DOID:0111573); ectodermal dysplasia 4 (Disease Ontology:DOID:0111658); ectodermal dysplasia 7 (Disease Ontology:DOID:0111660); focal or diffuse nonepidermolytic palmoplantar keratoderma (Disease Ontology:DOID:0111710); urinary bladder cancer (Disease Ontology:DOID:11054); ichthyosis (Disease Ontology:DOID:1697); pancreatic ductal carcinoma (Disease Ontology:DOID:3587); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); epidermolytic hyperkeratosis (Disease Ontology:DOID:4603); epidermolysis bullosa simplex (Disease Ontology:DOID:4644); cholangiocarcinoma (Disease Ontology:DOID:4947); liver cirrhosis (Disease Ontology:DOID:5082); alopecia (Disease Ontology:DOID:987)", "pathway": " (dre:797351); (R-DRE-6798695); (R-DRE-6805567); (R-DRE-6809371)", "pathway_count": 4, "publication_count": 10, "publication_id_list": "10997590;12190990;15376328;16297574;16379021;35886843;36248846;36322392;37024546;38271330", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC063955.1, BC159195.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC063955.1. On Sep 5, 2015 this sequence version replaced NP_571231.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 27, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PBF5", "ec_number_list": "", "go_molecular_function": "GO:0030280 structural constituent of skin epidermis", "go_cellular_component": "GO:0045095 keratin filament", "go_biological_process": "GO:0031424 keratinization;GO:0045109 intermediate filament organization;GO:0031101 fin regeneration", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QV31-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QV50-1", "uniprot_id": "F1QV50_DANRE", "mass": 90740.0, "length": 815, "protein_name": "NEL-like protein 2", "gene_name": "nell2b", "organism": "Zebrafish", "refseq_name": "protein kinase C-binding protein NELL2a-like", "refseq_ac": "XP_002661425", "gene_names_uniprotkb": "nell2b", "gene_names_refseq": "nell2b", "protein_names_uniprotkb": "NEL-like protein 2", "protein_names_refseq": "protein kinase C-binding protein NELL2a-like", "tax_id": 7955, "disease": "lung adenocarcinoma (Disease Ontology:DOID:3910)", "pathway": " (dre:336082)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May regulate neuronal differentiation, polarization and axon guidance., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RDG0", "ec_number_list": "", "go_molecular_function": "GO:0008201 heparin binding;GO:0005080 protein kinase C binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0005737 cytoplasm", "go_biological_process": "GO:0030855 epithelial cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QV50-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QV78-1", "uniprot_id": "F1QV78_DANRE", "mass": 64341.0, "length": 582, "protein_name": "Uncharacterized protein si:ch211-89o9.6", "gene_name": "si:ch211-89o9.6", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-89o9.6", "refseq_ac": "XP_687655", "gene_names_uniprotkb": "si:ch211-89o9.6", "gene_names_refseq": "si:ch211-89o9.6", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-89o9.6", "protein_names_refseq": "uncharacterized protein si:ch211-89o9.6", "tax_id": 7955, "disease": "", "pathway": " (dre:559243)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_687655.3. COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TCZ6", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QV78-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QVD7-1", "uniprot_id": "F1QVD7_DANRE", "mass": 47935.0, "length": 422, "protein_name": "3.4.17.15; Carboxypeptidase A2 precursor", "gene_name": "cpa2", "organism": "Zebrafish", "refseq_name": "carboxypeptidase A2 precursor", "refseq_ac": "NP_001003446", "gene_names_uniprotkb": "cpa2; zgc:92530", "gene_names_refseq": "cpa2; zgc:92530", "protein_names_uniprotkb": "3.4.17.15; Carboxypeptidase A2 precursor", "protein_names_refseq": "carboxypeptidase A2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:445052)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "20885977;21228001;26469318;27189481;34619175;35410466", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076057.1, GFIL01007004.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Dec 1, 2025 this sequence version replaced NP_001003446.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N162", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004181 metallocarboxypeptidase activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QVD7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QVG2-1", "uniprot_id": "F1QVG2_DANRE", "mass": 32270.0, "length": 278, "protein_name": "isopentenyl-diphosphate Delta-isomerase", "gene_name": "idi1", "organism": "Zebrafish", "refseq_name": "isopentenyl-diphosphate Delta-isomerase 1", "refseq_ac": "NP_001020646", "gene_names_uniprotkb": "idi1; zgc:114138", "gene_names_refseq": "idi1; zgc:114138", "protein_names_uniprotkb": "isopentenyl-diphosphate Delta-isomerase; 5.3.3.2", "protein_names_refseq": "isopentenyl-diphosphate Delta-isomerase 1", "tax_id": 7955, "disease": "", "pathway": " (dre:553513); (R-DRE-9969896)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "25483594;25938946;26469318;31575636;31677519", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097193.1, SRR32588717.19674199.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Jun 25, 2025 this sequence version replaced NP_001020646.2., [RefSeq]; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9B7", "ec_number_list": "5.3.3.2", "go_molecular_function": "GO:0004452 isopentenyl-diphosphate delta-isomerase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009240 isopentenyl diphosphate biosynthetic process;GO:0050992 dimethylallyl diphosphate biosynthetic process;GO:0006695 cholesterol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QVG2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QVJ4-1", "uniprot_id": "F1QVJ4_DANRE", "mass": 64132.0, "length": 598, "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "msl2b", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase MSL2", "refseq_ac": "NP_001156785", "gene_names_uniprotkb": "msl2b; fb76c07; fc51e04; si:ch211-197k23.4; wu:fb76c07; wu:fc51e04", "gene_names_refseq": "fb76c07; fc51e04; msl2b; si:ch211-197k23.4; wu:fb76c07; wu:fc51e04", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase MSL2; 2.3.2.27; Male-specific lethal-2 homolog", "protein_names_refseq": "E3 ubiquitin-protein ligase MSL2; male-specific lethal 2 homolog b", "tax_id": 7955, "disease": "", "pathway": " (dre:797201); (R-DRE-3214847)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "25792259;26469318;27189481;35364135", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01026948.1, GDQH01008243.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476794 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Jun 17, 2025 this sequence version replaced NP_001156785.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NS97", "ec_number_list": "2.3.2.27", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0072487 MSL complex", "go_biological_process": "GO:0006974 DNA damage response;GO:0016567 protein ubiquitination;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QVJ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QVV4-1", "uniprot_id": "F1QVV4_DANRE", "mass": 89632.0, "length": 790, "protein_name": "Cleavage and polyadenylation specificity factor subunit 2", "gene_name": "cpsf2", "organism": "Zebrafish", "refseq_name": "cleavage and polyadenylation specificity factor subunit 2 isoform X1", "refseq_ac": "XP_017207953", "gene_names_uniprotkb": "cpsf2; zgc:92484", "gene_names_refseq": "cpsf2; zgc:92484", "protein_names_uniprotkb": "Cleavage and polyadenylation specificity factor subunit 2; Cleavage and polyadenylation specificity factor 100 kDa subunit", "protein_names_refseq": "cleavage and polyadenylation specificity factor subunit 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:436657); (R-DRE-73856); (R-DRE-77595); (R-DRE-9770562)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YWL8", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005847 mRNA cleavage and polyadenylation specificity factor complex", "go_biological_process": "GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QVV4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QVX3-1", "uniprot_id": "F1QVX3_DANRE", "mass": 222604.0, "length": 1937, "protein_name": "Myosin heavy chain, fast skeletal muscle", "gene_name": "myhb", "organism": "Zebrafish", "refseq_name": "myosin heavy chain, fast skeletal muscle", "refseq_ac": "XP_001339206", "gene_names_uniprotkb": "myhb", "gene_names_refseq": "myhb", "protein_names_uniprotkb": "Myosin heavy chain, fast skeletal muscle", "protein_names_refseq": "myosin heavy chain, fast skeletal muscle", "tax_id": 7955, "disease": "distal arthrogryposis (Disease Ontology:DOID:0050646); cardiomyopathy (Disease Ontology:DOID:0050700); familial hypertrophic cardiomyopathy (Disease Ontology:DOID:0080326); congenital myopathy 6 (Disease Ontology:DOID:0080719); arthrogryposis multiplex congenita (Disease Ontology:DOID:0080954); dilated cardiomyopathy 1S (Disease Ontology:DOID:0110454); autosomal dominant hyaline body myopathy (Disease Ontology:DOID:0111269); distal arthrogryposis type 1 (Disease Ontology:DOID:0111596); distal arthrogryposis type 2B3 (Disease Ontology:DOID:0111602); distal arthrogryposis type 7 (Disease Ontology:DOID:0111603); distal arthrogryposis type 2A (Disease Ontology:DOID:0111605); sciatic neuropathy (Disease Ontology:DOID:11446); distal myopathy (Disease Ontology:DOID:11720); dilated cardiomyopathy (Disease Ontology:DOID:12930); disease of cellular proliferation (Disease Ontology:DOID:14566); myotonia congenita (Disease Ontology:DOID:2106); inclusion body myositis (Disease Ontology:DOID:3429); restrictive cardiomyopathy (Disease Ontology:DOID:397); myopathy (Disease Ontology:DOID:423); muscular dystrophy (Disease Ontology:DOID:9884)", "pathway": " (dre:100002040)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001339206.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 20, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PZA8;X1WF87", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0032982 myosin filament;GO:0030016 myofibril;GO:0016460 myosin II complex", "go_biological_process": "GO:0048731 system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QVX3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QVZ9-1", "uniprot_id": "F1QVZ9_DANRE", "mass": 68914.0, "length": 629, "protein_name": "Dual specificity protein phosphatase 8", "gene_name": "dusp8a", "organism": "Zebrafish", "refseq_name": "dual specificity protein phosphatase 8 isoform X1", "refseq_ac": "XP_005170736", "gene_names_uniprotkb": "dusp8a; zgc:77593", "gene_names_refseq": "dusp8a; zgc:77593", "protein_names_uniprotkb": "Dual specificity protein phosphatase 8; 3.1.3.16; 3.1.3.48", "protein_names_refseq": "dual specificity protein phosphatase 8 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-112409); (R-DRE-5675221)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Has phosphatase activity with synthetic phosphatase substrates and negatively regulates mitogen-activated protein kinase activity, presumably by catalysing their dephosphorylation. Expected to display protein phosphatase activity toward phosphotyrosine, phosphoserine and phosphothreonine residues., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BI14", "ec_number_list": "3.1.3.16;3.1.3.48;3.1.3.67;3.1.3.27", "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity;GO:0008330 protein tyrosine/threonine phosphatase activity;GO:0033550 MAP kinase tyrosine phosphatase activity;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QVZ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QW16-1", "uniprot_id": "F1QW16_DANRE", "mass": 61098.0, "length": 558, "protein_name": "Monocarboxylate transporter 5", "gene_name": "slc16a4", "organism": "Zebrafish", "refseq_name": "monocarboxylate transporter 5", "refseq_ac": "NP_001074068", "gene_names_uniprotkb": "slc16a4; zgc:158390", "gene_names_refseq": "slc16a4; zgc:158390", "protein_names_uniprotkb": "Monocarboxylate transporter 5", "protein_names_refseq": "monocarboxylate transporter 5; solute carrier family 16 (monocarboxylic acid transporters), member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:567144)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC129219.1, SRR32588715.882506.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Oct 30, 2009 this sequence version replaced NP_001074068.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BEE6;A0AC58G7W7", "ec_number_list": "", "go_molecular_function": "GO:0008028 monocarboxylic acid transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:1905039 carboxylic acid transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QW16-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QW52-1", "uniprot_id": "F1QW52_DANRE", "mass": 60879.0, "length": 546, "protein_name": "trypsin", "gene_name": "habp2", "organism": "Zebrafish", "refseq_name": "hyaluronan-binding protein 2 precursor", "refseq_ac": "NP_001103843", "gene_names_uniprotkb": "habp2; fd56a04; wu:fd56a04; zgc:171352", "gene_names_refseq": "fd56a04; habp2; wu:fd56a04; zgc:171352", "protein_names_uniprotkb": "trypsin; 3.4.21.4", "protein_names_refseq": "hyaluronan-binding protein 2 precursor", "tax_id": 7955, "disease": "thrombophilia due to thrombin defect (Disease Ontology:DOID:0111907); papillary thyroid carcinoma (Disease Ontology:DOID:3969)", "pathway": " (dre:553472)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "23954211;26469318;27189481;28982700", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124112.1, GFIL01012279.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1, EH495675.1, EH493599.1, EH493119.1, EH519452.1, EH521987.1 and EH518195.1. On or before Jun 20, 2015 this sequence version replaced XP_009305060.1, NP_001103843.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NF39", "ec_number_list": "", "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis;GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QW52-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QW74-1", "uniprot_id": "F1QW74_DANRE", "mass": 37684.0, "length": 322, "protein_name": "sphingolipid 4-desaturase", "gene_name": "degs2", "organism": "Zebrafish", "refseq_name": "sphingolipid delta(4)-desaturase/C4-monooxygenase DES2", "refseq_ac": "NP_001156838", "gene_names_uniprotkb": "degs2; im:6909358", "gene_names_refseq": "degs2; im:6909358", "protein_names_uniprotkb": "sphingolipid 4-desaturase; 1.14.19.17", "protein_names_refseq": "sphingolipid delta 4 desaturase/C-4 hydroxylase 2; sphingolipid delta(4)-desaturase/C4-monooxygenase DES2", "tax_id": 7955, "disease": "", "pathway": " (dre:402799); (R-DRE-1660661)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "26469318;27189481;34358088;36835354", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045962.1, EH550872.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Jul 19, 2009 this sequence version replaced XP_694195.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTC7", "ec_number_list": "1.14.19.17", "go_molecular_function": "GO:0042284 sphingolipid delta-4 desaturase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0046513 ceramide biosynthetic process;GO:0006667 sphinganine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QW74-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QW97-1", "uniprot_id": "F1QW97_DANRE", "mass": 62490.0, "length": 594, "protein_name": "Transcription factor Sp1", "gene_name": "sp1", "organism": "Zebrafish", "refseq_name": "transcription factor Sp1 isoform 1", "refseq_ac": "NP_997827", "gene_names_uniprotkb": "sp1; fc18h09; wu:fc18h09; zgc:85950", "gene_names_refseq": "fc18h09; sp1; wu:fc18h09; zgc:85950", "protein_names_uniprotkb": "Transcription factor Sp1", "protein_names_refseq": "Sp1-like protein; transcription factor Sp1 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-6807505); (R-DRE-9762293)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "14609954;20123021;21040790;21167140;21925271;34236575;36478733;36826429;37009226;37487085", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01005404.1, SRR26395012.169030.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On or before Jun 10, 2025 this sequence version replaced XP_073771605.1, NP_997827.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; A hierarchic gene expression of copper homeostatic genes was demonstrated between atp7a, sp1 and sod1 in zebrafish., [RefSeq, PubMed]; Zebrafish Sp1-like protein is structurally and functionally comparable to human Sp1, [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHF3", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0003690 double-stranded DNA binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045743 positive regulation of fibroblast growth factor receptor signaling pathway;GO:0035118 embryonic pectoral fin morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QW97-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QWE6-1", "uniprot_id": "F1QWE6_DANRE", "mass": 86981.0, "length": 791, "protein_name": "Plakophilin-3 isoform X1", "gene_name": "pkp3b", "organism": "Zebrafish", "refseq_name": "plakophilin-3 isoform X1", "refseq_ac": "XP_002662884", "gene_names_uniprotkb": "pkp3b", "gene_names_refseq": "pkp3b", "protein_names_uniprotkb": "Plakophilin-3 isoform X1", "protein_names_refseq": "plakophilin-3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100330353); (R-DRE-6805567); (R-DRE-6809371)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RDM4", "ec_number_list": "", "go_molecular_function": "GO:0045296 cadherin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005912 adherens junction;GO:0070161 anchoring junction", "go_biological_process": "GO:0098609 cell-cell adhesion;GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QWE6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QWF1-1", "uniprot_id": "F1QWF1_DANRE", "mass": 84467.0, "length": 745, "protein_name": "Uncharacterized protein si:dkey-40c11.2 isoform X1", "gene_name": "si:dkey-40c11.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-40c11.2 isoform X1", "refseq_ac": "XP_005165493", "gene_names_uniprotkb": "si:dkey-40c11.2", "gene_names_refseq": "si:dkey-40c11.2", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-40c11.2 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-40c11.2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:798260)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BCR0", "ec_number_list": "", "go_molecular_function": "GO:0051015 actin filament binding;GO:0003779 actin binding", "go_cellular_component": "GO:0014069 postsynaptic density;GO:0030027 lamellipodium;GO:0030425 dendrite;GO:0045211 postsynaptic membrane;GO:0030864 cortical actin cytoskeleton", "go_biological_process": "GO:0048812 neuron projection morphogenesis;GO:0098974 postsynaptic actin cytoskeleton organization;GO:0045773 positive regulation of axon extension;GO:0061003 positive regulation of dendritic spine morphogenesis;GO:0030833 regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QWF1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QWF9-1", "uniprot_id": "F1QWF9_DANRE", "mass": 32514.0, "length": 286, "protein_name": "HAUS augmin-like complex subunit 1", "gene_name": "haus1", "organism": "Zebrafish", "refseq_name": "HAUS augmin-like complex subunit 1", "refseq_ac": "NP_001243178", "gene_names_uniprotkb": "haus1; ccdc5; si:ch73-314k14.1", "gene_names_refseq": "ccdc5; haus1; si:ch73-314k14.1", "protein_names_uniprotkb": "HAUS augmin-like complex subunit 1", "protein_names_refseq": "HAUS augmin-like complex subunit 1", "tax_id": 7955, "disease": "", "pathway": " (dre:553389); (R-DRE-380320)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;31518507", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZ00", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005819 spindle;GO:0005829 cytosol;GO:0005874 microtubule;GO:0070652 HAUS complex", "go_biological_process": "GO:0051301 cell division;GO:0007098 centrosome cycle;GO:0051225 spindle assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QWF9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QWH2-1", "uniprot_id": "F1QWH2_DANRE", "mass": 38406.0, "length": 338, "protein_name": "Serine/threonine-protein kinase SBK1", "gene_name": "si:dkey-8e10.3", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase SBK1", "refseq_ac": "XP_001341750", "gene_names_uniprotkb": "si:dkey-8e10.3", "gene_names_refseq": "si:dkey-8e10.3", "protein_names_uniprotkb": "Serine/threonine-protein kinase SBK1", "protein_names_refseq": "serine/threonine-protein kinase SBK1", "tax_id": 7955, "disease": "", "pathway": " (dre:100001826)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q7N1", "ec_number_list": "", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004708 MAP kinase kinase activity", "go_cellular_component": "", "go_biological_process": "GO:0000165 MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QWH2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QWW1-1", "uniprot_id": "F1QWW1_DANRE", "mass": 46836.0, "length": 412, "protein_name": "Pseudouridylate synthase 1 homolog", "gene_name": "pus1", "organism": "Zebrafish", "refseq_name": "pseudouridylate synthase 1 homolog", "refseq_ac": "NP_001008603", "gene_names_uniprotkb": "pus1; wu:fb98h11; zgc:103516", "gene_names_refseq": "pus1; wu:fb98h11; zgc:103516", "protein_names_uniprotkb": "Pseudouridylate synthase 1 homolog; 5.4.99.12; tRNA pseudouridine synthase 1; tRNA pseudouridine(38-40) synthase; tRNA pseudouridylate synthase I; tRNA-uridine isomerase I", "protein_names_refseq": "pseudouridylate synthase 1 homolog; pseudouridylate synthase 1", "tax_id": 7955, "disease": "myopathy, lactic acidosis, and sideroblastic anemia (Disease Ontology:DOID:0080099); myopathy, lactic acidosis, and sideroblastic anemia 1 (Disease Ontology:DOID:0111185)", "pathway": " (dre:494060)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "24683187;25142379;26469318;26990990", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001751.1, GDQQ01003382.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On Jun 25, 2025 this sequence version replaced NP_001008603.2., [RefSeq]; Pseudouridylate synthase that catalyzes pseudouridylation of tRNAs and mRNAs. Acts on positions 27/28 in the anticodon stem and also positions 34 and 36 in the anticodon of an intron containing tRNA. Also catalyzes pseudouridylation of mRNAs: mediates pseudouridylation of mRNAs with the consensus sequence 5'-UGUAG-3'. Acts as a regulator of pre-mRNA splicing by mediating pseudouridylation of pre-mRNAs at locations associated with alternatively spliced regions. Pseudouridylation of pre-mRNAs near splice sites directly regulates mRNA splicing and mRNA 3'-end processing. Involved in regulation of nuclear receptor activity through pseudouridylation of SRA1 mRNA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N3B0", "ec_number_list": "5.4.99.12;5.4.99.-", "go_molecular_function": "GO:0003723 RNA binding;GO:0009982 pseudouridine synthase activity;GO:0160147 tRNA pseudouridine(38-40) synthase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0031119 tRNA pseudouridine synthesis;GO:0006397 mRNA processing;GO:1990481 mRNA pseudouridine synthesis", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QWW1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QWX4-1", "uniprot_id": "F1QWX4_DANRE", "mass": 28560.0, "length": 261, "protein_name": "Sepiapterin reductase", "gene_name": "spra", "organism": "Zebrafish", "refseq_name": "sepiapterin reductase a", "refseq_ac": "NP_001019601", "gene_names_uniprotkb": "spra; fj86h06; spr; wu:fj86h06; zgc:112298", "gene_names_refseq": "fj86h06; spra; spr; wu:fj86h06; zgc:112298", "protein_names_uniprotkb": "Sepiapterin reductase; 1.1.1.153", "protein_names_refseq": "sepiapterin reductase a", "tax_id": 7955, "disease": "sepiapterin reductase deficiency (Disease Ontology:DOID:0111168); Parkinson's disease (Disease Ontology:DOID:14330); dystonia (Disease Ontology:DOID:543)", "pathway": " (dre:554136); (R-DRE-1474151); (R-DRE-203615)", "pathway_count": 3, "publication_count": 8, "publication_id_list": "17024299;17498288;20333216;26469318;27189481;28249010;28252024;29248853", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003905.1, SRR32588729.10854821.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476735, SAMEA4476746 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Jul 8, 2011 this sequence version replaced NP_001019601.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; The zebrafish mutation m865 affects formation of dopaminergic neurons and neuronal survival, and maps to a genetic interval containing the sepiapterin reductase locus., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N6P5", "ec_number_list": "1.1.1.153", "go_molecular_function": "GO:0004757 sepiapterin reductase (NADP+) activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006729 tetrahydrobiopterin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1QWX4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QWZ8-1", "uniprot_id": "F1QWZ8_DANRE", "mass": 37808.0, "length": 338, "protein_name": "Adenosine receptor A1", "gene_name": "adora3a.2", "organism": "Zebrafish", "refseq_name": "adenosine receptor A1", "refseq_ac": "XP_693932", "gene_names_uniprotkb": "adora3a.2", "gene_names_refseq": "adora3a.2", "protein_names_uniprotkb": "Adenosine receptor A1", "protein_names_refseq": "adenosine receptor A1", "tax_id": 7955, "disease": "", "pathway": " (dre:571410); (R-DRE-417973); (R-DRE-418594)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_693932.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UV33", "ec_number_list": "", "go_molecular_function": "GO:0001609 G protein-coupled adenosine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030425 dendrite;GO:0045202 synapse", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QWZ8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QXE8-1", "uniprot_id": "F1QXE8_DANRE", "mass": 71058.0, "length": 629, "protein_name": "beta-galactosidase", "gene_name": "glb1l", "organism": "Zebrafish", "refseq_name": "beta-galactosidase-1-like protein precursor", "refseq_ac": "NP_001116328", "gene_names_uniprotkb": "glb1l; im:7151535; si:ch211-167j6.1; wu:fj54e10", "gene_names_refseq": "glb1l; im:7151535; si:ch211-167j6.1; wu:fj54e10", "protein_names_uniprotkb": "beta-galactosidase; 3.2.1.23", "protein_names_refseq": "beta-galactosidase-1-like protein precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100001628)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "17016731;17251491;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC166043.1, SRR32588717.18136253.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505390, SAMEA4476729 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Mar 28, 2008 this sequence version replaced XP_001336884.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Cleaves beta-linked terminal galactosyl residues from gangliosides, glycoproteins, and glycosaminoglycans., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIB2", "ec_number_list": "", "go_molecular_function": "GO:0004565 beta-galactosidase activity", "go_cellular_component": "GO:0005773 vacuole", "go_biological_process": "GO:0019388 galactose catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QXE8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QXF9-1", "uniprot_id": "F1QXF9_DANRE", "mass": 73656.0, "length": 644, "protein_name": "Interferon-induced GTP-binding protein Mx3 isoform X1", "gene_name": "mxd", "organism": "Zebrafish", "refseq_name": "interferon-induced GTP-binding protein Mx3 isoform X1", "refseq_ac": "XP_695562", "gene_names_uniprotkb": "mxd", "gene_names_refseq": "mxd", "protein_names_uniprotkb": "Interferon-induced GTP-binding protein Mx3 isoform X1", "protein_names_refseq": "interferon-induced GTP-binding protein Mx3 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_695562.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVH9", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008017 microtubule binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0051607 defense response to virus;GO:0016185 synaptic vesicle budding from presynaptic endocytic zone membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QXF9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QXK9-1", "uniprot_id": "F1QXK9_DANRE", "mass": 70765.0, "length": 636, "protein_name": "Sodium/potassium/calcium exchanger 4", "gene_name": "slc24a4b", "organism": "Zebrafish", "refseq_name": "sodium/potassium/calcium exchanger 4", "refseq_ac": "XP_002665845", "gene_names_uniprotkb": "slc24a4b", "gene_names_refseq": "slc24a4b", "protein_names_uniprotkb": "Sodium/potassium/calcium exchanger 4", "protein_names_refseq": "sodium/potassium/calcium exchanger 4", "tax_id": 7955, "disease": "amelogenesis imperfecta hypomaturation type 2A5 (Disease Ontology:DOID:0110063); pigmentation disease (Disease Ontology:DOID:10123)", "pathway": " (dre:100334346); (R-DRE-425561)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002665845.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RKZ5", "ec_number_list": "", "go_molecular_function": "GO:0005262 calcium channel activity;GO:0008273 calcium, potassium:sodium antiporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0120199 cone photoreceptor outer segment", "go_biological_process": "GO:0006874 intracellular calcium ion homeostasis;GO:0070588 calcium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QXK9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QXL6-1", "uniprot_id": "F1QXL6_DANRE", "mass": 56051.0, "length": 503, "protein_name": "H/ACA ribonucleoprotein complex non-core subunit NAF1", "gene_name": "naf1", "organism": "Zebrafish", "refseq_name": "H/ACA ribonucleoprotein complex non-core subunit NAF1", "refseq_ac": "XP_021330896", "gene_names_uniprotkb": "naf1", "gene_names_refseq": "naf1", "protein_names_uniprotkb": "H/ACA ribonucleoprotein complex non-core subunit NAF1", "protein_names_refseq": "H/ACA ribonucleoprotein complex non-core subunit NAF1", "tax_id": 7955, "disease": "melanoma (Disease Ontology:DOID:1909)", "pathway": " (dre:568328)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; RNA-binding protein required for the maturation of box H/ACA snoRNPs complex and ribosome biogenesis. During assembly of the H/ACA snoRNPs complex, it associates with the complex and disappears during maturation of the complex and is replaced by NOLA1/GAR1 to yield mature H/ACA snoRNPs complex. Probably competes with NOLA1/GAR1 for binding with DKC1/NOLA4., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9Q692", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005732 sno(s)RNA-containing ribonucleoprotein complex", "go_biological_process": "GO:0042254 ribosome biogenesis;GO:0006364 rRNA processing;GO:0001522 pseudouridine synthesis;GO:0000493 box H/ACA snoRNP assembly;GO:0043489 RNA stabilization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QXL6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QXS2-1", "uniprot_id": "F1QXS2_DANRE", "mass": 30747.0, "length": 279, "protein_name": "Protein shisa-3 homolog precursor", "gene_name": "shisa3", "organism": "Zebrafish", "refseq_name": "protein shisa-3 homolog precursor", "refseq_ac": "NP_001074131", "gene_names_uniprotkb": "shisa3; zgc:158294", "gene_names_refseq": "shisa3; zgc:158294", "protein_names_uniprotkb": "Protein shisa-3 homolog precursor", "protein_names_refseq": "protein shisa-3 homolog precursor; protein shisa-3 homolog; shisa homolog 3", "tax_id": 7955, "disease": "", "pathway": " (dre:791180)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "23559552;26469318;27189481;37762365", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01021510.1, SRR32588732.11763956.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898404 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH594153.1 and JBMGRA010000014.1. On Jul 15, 2011 this sequence version replaced NP_001074131.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCW9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QXS2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QXS5-1", "uniprot_id": "F1QXS5_DANRE", "mass": 72043.0, "length": 685, "protein_name": "TOX high mobility group box family member 4-B", "gene_name": "tox4a", "organism": "Zebrafish", "refseq_name": "epidermal Langerhans cell protein LCP1-like", "refseq_ac": "NP_001428573", "gene_names_uniprotkb": "tox4a", "gene_names_refseq": "si:dkey-75g22.1; tox4a; tox4; wu:fe15b11", "protein_names_uniprotkb": "TOX high mobility group box family member 4-B", "protein_names_refseq": "epidermal Langerhans cell protein LCP1-like", "tax_id": 7955, "disease": "", "pathway": " (dre:559853)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01007037.1, GDQQ01018646.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Jun 25, 2025 this sequence version replaced XP_021326932.1., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QLB8", "ec_number_list": "", "go_molecular_function": "GO:0031490 chromatin DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QXS5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QXS6-1", "uniprot_id": "F1QXS6_DANRE", "mass": 45028.0, "length": 390, "protein_name": "phosphorylase kinase", "gene_name": "phkg2", "organism": "Zebrafish", "refseq_name": "phosphorylase b kinase gamma catalytic chain, liver/testis isoform isoform X1", "refseq_ac": "XP_009304874", "gene_names_uniprotkb": "phkg2; zgc:55863", "gene_names_refseq": "phkg2; zgc:55863", "protein_names_uniprotkb": "phosphorylase kinase; 2.7.11.19", "protein_names_refseq": "phosphorylase b kinase gamma catalytic chain, liver/testis isoform isoform X1", "tax_id": 7955, "disease": "glycogen storage disease IXc (Disease Ontology:DOID:0111043); glycogen storage disease (Disease Ontology:DOID:2747); liver cirrhosis (Disease Ontology:DOID:5082)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AY76", "ec_number_list": "", "go_molecular_function": "GO:0004689 phosphorylase kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding", "go_cellular_component": "GO:0005964 phosphorylase kinase complex;GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0005977 glycogen metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QXS6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QY38-1", "uniprot_id": "F1QY38_DANRE", "mass": 130335.0, "length": 1168, "protein_name": "ubiquitinyl hydrolase 1", "gene_name": "usp42", "organism": "Zebrafish", "refseq_name": "ubiquitin carboxyl-terminal hydrolase 42 isoform X1", "refseq_ac": "XP_005169520", "gene_names_uniprotkb": "usp42", "gene_names_refseq": "usp42", "protein_names_uniprotkb": "ubiquitinyl hydrolase 1; 3.4.19.12", "protein_names_refseq": "ubiquitin carboxyl-terminal hydrolase 42 isoform X1", "tax_id": 7955, "disease": "congenital heart disease (Disease Ontology:DOID:1682); primary ovarian insufficiency (Disease Ontology:DOID:5426)", "pathway": " (dre:327528); (R-DRE-5689880); (R-DRE-9648002)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IA55;A0A8M2BGS6;A0AC58GXJ7", "ec_number_list": "3.4.19.12;3.1.3.48;3.4.26.1", "go_molecular_function": "GO:0016787 hydrolase activity;GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006508 proteolysis;GO:0016579 protein deubiquitination;GO:0031647 regulation of protein stability;GO:0042981 regulation of apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QY38-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QY50-1", "uniprot_id": "F1QY50_DANRE", "mass": 13006.0, "length": 112, "protein_name": "Somatostatin 6 precursor", "gene_name": "sst6.2", "organism": "Zebrafish", "refseq_name": "somatostatin 6 precursor", "refseq_ac": "NP_001122256", "gene_names_uniprotkb": "sst6.2; sst6; zgc:195219; zgc:195243", "gene_names_refseq": "sst6.2; sst6; zgc:195219; zgc:195243", "protein_names_uniprotkb": "Somatostatin 6 precursor", "protein_names_refseq": "SS6; somatostatin 6 precursor; somatostatin 6", "tax_id": 7955, "disease": "", "pathway": " (dre:794095)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "20472043;25417113;27189481;30836103;34903892", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: DN858179.1, GFIL01039812.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476741, SAMEA4476745 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1, BC163206.1 and EH440100.1. On Nov 5, 2015 this sequence version replaced NP_001122256.1., [RefSeq]; Somatostatin inhibits the release of somatotropin., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIH8", "ec_number_list": "", "go_molecular_function": "GO:0001664 G protein-coupled receptor binding;GO:0005184 neuropeptide hormone activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway;GO:0030334 regulation of cell migration", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QY50-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYC0-1", "uniprot_id": "F1QYC0_DANRE", "mass": 33791.0, "length": 289, "protein_name": "Protein CLN8", "gene_name": "cln8", "organism": "Zebrafish", "refseq_name": "protein CLN8", "refseq_ac": "NP_001108060", "gene_names_uniprotkb": "cln8; zgc:172202", "gene_names_refseq": "cln8; zgc:172202", "protein_names_uniprotkb": "Protein CLN8", "protein_names_refseq": "ceroid-lipofuscinosis, neuronal 8; protein CLN8", "tax_id": 7955, "disease": "neuronal ceroid lipofuscinosis 8 (Disease Ontology:DOID:0110723); neuronal ceroid lipofuscinosis 8 northern epilepsy variant (Disease Ontology:DOID:0110724)", "pathway": " (dre:100136870)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;38763444", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01004229.1, SRR32588727.2785741.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476744, SAMEA4476767 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Jun 25, 2025 this sequence version replaced NP_001108060.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Targeting autophagy impairment improves the phenotype of a novel CLN8 zebrafish model., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYR8;F8W2V0", "ec_number_list": "", "go_molecular_function": "GO:0097001 ceramide binding", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0007399 nervous system development;GO:0010506 regulation of autophagy;GO:0050890 cognition;GO:0055088 lipid homeostasis;GO:0050727 regulation of inflammatory response", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QYC0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYD4-1", "uniprot_id": "F1QYD4_DANRE", "mass": 41119.0, "length": 358, "protein_name": "C-C chemokine receptor type 4-like", "gene_name": "ccr2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "ccr2; si:ch211-207g17.3", "gene_names_refseq": "", "protein_names_uniprotkb": "C-C chemokine receptor type 4-like", "protein_names_refseq": "", "tax_id": 7955, "disease": "oral squamous cell carcinoma (Disease Ontology:DOID:0050866); metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); Coronavirus infectious disease (Disease Ontology:DOID:0080599); polymyositis (Disease Ontology:DOID:0080745); graft-versus-host disease (Disease Ontology:DOID:0081267); age related macular degeneration 12 (Disease Ontology:DOID:0110024); type 1 diabetes mellitus 22 (Disease Ontology:DOID:0110759); dry eye syndrome (Disease Ontology:DOID:10140); dermatomyositis (Disease Ontology:DOID:10223); berylliosis (Disease Ontology:DOID:10322); pleural tuberculosis (Disease Ontology:DOID:106); Alzheimer's disease (Disease Ontology:DOID:10652); otitis media (Disease Ontology:DOID:10754); hypertension (Disease Ontology:DOID:10763); age related macular degeneration (Disease Ontology:DOID:10871); Kuhnt-Junius degeneration (Disease Ontology:DOID:10873); sarcoidosis (Disease Ontology:DOID:11335); retinal vasculitis (Disease Ontology:DOID:11563); prediabetes syndrome (Disease Ontology:DOID:11716); optic neuritis (Disease Ontology:DOID:1210); granulomatosis with polyangiitis (Disease Ontology:DOID:12132); posterior uveitis (Disease Ontology:DOID:12574); respiratory syncytial virus infectious disease (Disease Ontology:DOID:1273); intermediate uveitis (Disease Ontology:DOID:12732); Sjogren's syndrome (Disease Ontology:DOID:12894); keratoconjunctivitis sicca (Disease Ontology:DOID:12895); Behcet's disease (Disease Ontology:DOID:13241); Kawasaki disease (Disease Ontology:DOID:13378); pulmonary sarcoidosis (Disease Ontology:DOID:13406); aggressive periodontitis (Disease Ontology:DOID:1474); urticaria (Disease Ontology:DOID:1555); fungal infectious disease (Disease Ontology:DOID:1564); breast cancer (Disease Ontology:DOID:1612); glaucoma (Disease Ontology:DOID:1686); pancreatic cancer (Disease Ontology:DOID:1793); hepatitis C (Disease Ontology:DOID:1883); fallopian tube disease (Disease Ontology:DOID:1962); hepatitis B (Disease Ontology:DOID:2043); West Nile fever (Disease Ontology:DOID:2366); multiple sclerosis (Disease Ontology:DOID:2377); asthma (Disease Ontology:DOID:2841); pulmonary tuberculosis (Disease Ontology:DOID:2957); interstitial lung disease (Disease Ontology:DOID:3082); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); gallbladder cancer (Disease Ontology:DOID:3121); atopic dermatitis (Disease Ontology:DOID:3310); amyotrophic lateral sclerosis (Disease Ontology:DOID:332); coronary artery disease (Disease Ontology:DOID:3393); inclusion body myositis (Disease Ontology:DOID:3429); cervical squamous cell carcinoma (Disease Ontology:DOID:3744); pulmonary fibrosis (Disease Ontology:DOID:3770); ovarian carcinoma (Disease Ontology:DOID:4001); syphilis (Disease Ontology:DOID:4166); systemic scleroderma (Disease Ontology:DOID:418); macular degeneration (Disease Ontology:DOID:4448); rhinitis (Disease Ontology:DOID:4483); periapical granuloma (Disease Ontology:DOID:4617); human immunodeficiency virus infectious disease (Disease Ontology:DOID:526); myocardial infarction (Disease Ontology:DOID:5844); congestive heart failure (Disease Ontology:DOID:6000); pulmonary hypertension (Disease Ontology:DOID:6432); systemic juvenile rheumatoid arthritis (Disease Ontology:DOID:676); rheumatoid arthritis (Disease Ontology:DOID:7148); osteoarthritis (Disease Ontology:DOID:8398); lung disease (Disease Ontology:DOID:850); myeloid sarcoma (Disease Ontology:DOID:8683); psoriasis (Disease Ontology:DOID:8893); psoriatic arthritis (Disease Ontology:DOID:9008); leishmaniasis (Disease Ontology:DOID:9065); systemic lupus erythematosus (Disease Ontology:DOID:9074); cutaneous leishmaniasis (Disease Ontology:DOID:9111); type 2 diabetes mellitus (Disease Ontology:DOID:9352); pulmonary emphysema (Disease Ontology:DOID:9675); type 1 diabetes mellitus (Disease Ontology:DOID:9744); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:100005081); (R-DRE-380108); (R-DRE-418594)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 75, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q278", "ec_number_list": "", "go_molecular_function": "GO:0016493 C-C chemokine receptor activity;GO:0019957 C-C chemokine binding", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0019722 calcium-mediated signaling;GO:0042117 monocyte activation;GO:0060326 cell chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QYD4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYH1-1", "uniprot_id": "F1QYH1_DANRE", "mass": 133436.0, "length": 1143, "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt3b", "organism": "Zebrafish", "refseq_name": "beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1", "refseq_ac": "XP_001342883", "gene_names_uniprotkb": "b4galnt3b", "gene_names_refseq": "b4galnt3b", "protein_names_uniprotkb": "Beta-1,4-N-acetylgalactosaminyltransferase; 2.4.1.244", "protein_names_refseq": "beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:553524)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001342883.3. COMPLETENESS: full length., [RefSeq]; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'-diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PSP9", "ec_number_list": "2.4.1.-;2.4.1.244", "go_molecular_function": "GO:0008376 acetylgalactosaminyltransferase activity;GO:0033842 N-acetyl-beta-glucosaminyl-derivative 4-beta-N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0032580 Golgi cisterna membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QYH1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYH9-1", "uniprot_id": "F1QYH9_DANRE", "mass": 53671.0, "length": 484, "protein_name": "Solute carrier family 2, facilitated glucose transporter member 5", "gene_name": "slc2a1c", "organism": "Zebrafish", "refseq_name": "solute carrier family 2, facilitated glucose transporter member 1 isoform X1", "refseq_ac": "XP_002665301", "gene_names_uniprotkb": "slc2a1c", "gene_names_refseq": "slc2a1c", "protein_names_uniprotkb": "Solute carrier family 2, facilitated glucose transporter member 5; Fructose transporter; Glucose transporter type 5, small intestine", "protein_names_refseq": "solute carrier family 2, facilitated glucose transporter member 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100334818); (R-DRE-189200); (R-DRE-196836); (R-DRE-6798695)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002665301.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RRL5", "ec_number_list": "", "go_molecular_function": "GO:0005353 fructose transmembrane transporter activity;GO:0055056 D-glucose transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0042383 sarcolemma", "go_biological_process": "GO:0070837 dehydroascorbic acid transport;GO:1990539 fructose import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QYH9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYI8-1", "uniprot_id": "F1QYI8_DANRE", "mass": 33913.0, "length": 305, "protein_name": "Dual specificity protein phosphatase 12", "gene_name": "dusp12", "organism": "Zebrafish", "refseq_name": "dual specificity protein phosphatase 12 isoform X1", "refseq_ac": "XP_005163680", "gene_names_uniprotkb": "dusp12; zgc:114069", "gene_names_refseq": "dusp12; zgc:114069", "protein_names_uniprotkb": "Dual specificity protein phosphatase 12; 3.1.3.16; 3.1.3.48", "protein_names_refseq": "dual specificity protein phosphatase 12 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Dual specificity phosphatase; can dephosphorylate both phosphotyrosine and phosphoserine or phosphothreonine residues. Can dephosphorylate glucokinase (in vitro). Has phosphatase activity with the synthetic substrate 6,8-difluoro-4-methylumbelliferyl phosphate and other in vitro substrates., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BAR6;A0AC58H491;A0AC58H499", "ec_number_list": "3.1.3.16;3.1.3.48;3.1.3.2;3.1.3.67;3.1.3.27;3.1.3.21", "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:0008138 protein tyrosine/serine/threonine phosphatase activity;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QYI8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYK7-1", "uniprot_id": "F1QYK7_DANRE", "mass": 124118.0, "length": 1131, "protein_name": "Protein kinase C binding protein 1, like", "gene_name": "prkcbp1l", "organism": "Zebrafish", "refseq_name": "protein kinase C binding protein 1, like", "refseq_ac": "NP_955935", "gene_names_uniprotkb": "prkcbp1l; im:7138336; wu:fb99d12; zgc:63775", "gene_names_refseq": "im:7138336; prkcbp1l; wu:fb99d12; zgc:63775", "protein_names_uniprotkb": "Protein kinase C binding protein 1, like", "protein_names_refseq": "protein kinase C binding protein 1, like", "tax_id": 7955, "disease": "", "pathway": " (dre:323479); (R-DRE-9940951)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "24240475;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC058064.1, SRR26395062.561384.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Jun 25, 2025 this sequence version replaced NP_955935.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B8U2", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003714 transcription corepressor activity;GO:0016301 kinase activity;GO:0140006 histone H3 reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QYK7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYM7-1", "uniprot_id": "F1QYM7_DANRE", "mass": 54301.0, "length": 500, "protein_name": "Reticulophagy regulator 3", "gene_name": "retreg3", "organism": "Zebrafish", "refseq_name": "reticulophagy regulator 3", "refseq_ac": "XP_694371", "gene_names_uniprotkb": "retreg3", "gene_names_refseq": "retreg3", "protein_names_uniprotkb": "Reticulophagy regulator 3", "protein_names_refseq": "reticulophagy regulator 3", "tax_id": 7955, "disease": "", "pathway": " (dre:566014)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVZ1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0061709 reticulophagy", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QYM7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYP6-1", "uniprot_id": "F1QYP6_DANRE", "mass": 51526.0, "length": 457, "protein_name": "Carboxypeptidase", "gene_name": "si:ch211-122f10.4", "organism": "Zebrafish", "refseq_name": "cathepsin A-like precursor", "refseq_ac": "NP_001373581", "gene_names_uniprotkb": "si:ch211-122f10.4; zmp:0000001085", "gene_names_refseq": "si:ch211-122f10.4; zmp:0000001085", "protein_names_uniprotkb": "Carboxypeptidase; 3.4.16.-", "protein_names_refseq": "cathepsin A-like precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:792966)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01000721.1, BC160630.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Aug 29, 2020 this sequence version replaced XP_001331905.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PU30", "ec_number_list": "", "go_molecular_function": "GO:0004185 serine-type carboxypeptidase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QYP6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYS1-1", "uniprot_id": "F1QYS1_DANRE", "mass": 115771.0, "length": 1000, "protein_name": "Synaptonemal complex protein 1", "gene_name": "sycp1", "organism": "Zebrafish", "refseq_name": "synaptonemal complex protein 1", "refseq_ac": "NP_001112366", "gene_names_uniprotkb": "sycp1; isa", "gene_names_refseq": "isa; sycp1", "protein_names_uniprotkb": "Synaptonemal complex protein 1", "protein_names_refseq": "synaptonemal complex protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:402797)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "18629171;19646228;21594953;23427147;23966324;32937161;33524105;33842489;36769379;38421617", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588728.18818540.1, SRR32588722.42769089.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715699, SAMN18715719 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000006.1. On Mar 7, 2008 this sequence version replaced XP_684182.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI12", "ec_number_list": "", "go_molecular_function": "GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0000801 central element;GO:0001673 male germ cell nucleus;GO:0000802 transverse filament", "go_biological_process": "GO:0051598 meiotic recombination checkpoint signaling;GO:0000711 meiotic DNA repair synthesis;GO:0007141 male meiosis I;GO:0051026 chiasma assembly;GO:0051878 lateral element assembly", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QYS1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYT4-1", "uniprot_id": "F1QYT4_DANRE", "mass": 61426.0, "length": 537, "protein_name": "Hedgehog acyltransferase like, b", "gene_name": "hhatlb", "organism": "Zebrafish", "refseq_name": "hedgehog acyltransferase like, b", "refseq_ac": "NP_001070858", "gene_names_uniprotkb": "hhatlb; c3orf3b; gup1b; im:7145545; wu:fc04e05; zgc:154131", "gene_names_refseq": "c3orf3b; gup1b; hhatlb; im:7145545; wu:fc04e05; zgc:154131", "protein_names_uniprotkb": "Hedgehog acyltransferase like, b", "protein_names_refseq": "gup1, glycerol uptake/transporter homolog B; hedgehog acyltransferase like, b", "tax_id": 7955, "disease": "", "pathway": " (dre:792224)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16109975;24298298;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01012479.1, SRR26395062.134981.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH581028.1, JBMGRA010000024.1 and EH602025.1. On Jun 17, 2016 this sequence version replaced NP_001070858.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAB2", "ec_number_list": "", "go_molecular_function": "GO:0016746 acyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0031399 regulation of protein modification process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1QYT4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYX0-1", "uniprot_id": "F1QYX0_DANRE", "mass": 33843.0, "length": 305, "protein_name": "Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1", "gene_name": "ldlrad4a", "organism": "Zebrafish", "refseq_name": "low-density lipoprotein receptor class A domain-containing protein 4 isoform X1", "refseq_ac": "XP_021323969", "gene_names_uniprotkb": "ldlrad4a", "gene_names_refseq": "ldlrad4a", "protein_names_uniprotkb": "Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1", "protein_names_refseq": "low-density lipoprotein receptor class A domain-containing protein 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:562665)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PH05;F1QAT1", "ec_number_list": "", "go_molecular_function": "GO:0070412 R-SMAD binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0031901 early endosome membrane", "go_biological_process": "GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QYX0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QYY6-1", "uniprot_id": "F1QYY6_DANRE", "mass": 62781.0, "length": 583, "protein_name": "CREB-regulated transcription coactivator 1b", "gene_name": "crtc1b", "organism": "Zebrafish", "refseq_name": "CREB-regulated transcription coactivator 1b", "refseq_ac": "NP_001352231", "gene_names_uniprotkb": "crtc1b; crtc1; si:ch211-255d18.8; zfTorc1", "gene_names_refseq": "crtc1b; crtc1; si:ch211-255d18.8; zfTorc1", "protein_names_uniprotkb": "CREB-regulated transcription coactivator 1b", "protein_names_refseq": "CH211-255D18.10; CH211-255D18.9; CREB-regulated transcription coactivator 1b", "tax_id": 7955, "disease": "major depressive disorder (Disease Ontology:DOID:1470)", "pathway": " (dre:101886240)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "21172930;27189481;36452329;36755921;39093699", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588731.1330448.1, SRR32588732.19828190.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476732, SAMEA4476737 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Jun 25, 2025 this sequence version replaced NP_001352231.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BK37", "ec_number_list": "", "go_molecular_function": "GO:0008140 cAMP response element binding protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0051289 protein homotetramerization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1QYY6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZ06-1", "uniprot_id": "F1QZ06_DANRE", "mass": 103358.0, "length": 911, "protein_name": "Protein FAN isoform X1", "gene_name": "nsmaf", "organism": "Zebrafish", "refseq_name": "protein FAN isoform X1", "refseq_ac": "XP_003199050", "gene_names_uniprotkb": "nsmaf", "gene_names_refseq": "nsmaf", "protein_names_uniprotkb": "Protein FAN isoform X1", "protein_names_refseq": "protein FAN isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:550506); (R-DRE-5626978)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RIR3", "ec_number_list": "", "go_molecular_function": "GO:0016230 sphingomyelin phosphodiesterase activator activity", "go_cellular_component": "", "go_biological_process": "GO:0033209 tumor necrosis factor-mediated signaling pathway;GO:0030593 neutrophil chemotaxis;GO:0002232 leukocyte chemotaxis involved in inflammatory response;GO:0002233 leukocyte chemotaxis involved in immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QZ06-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZ20-1", "uniprot_id": "F1QZ20_DANRE", "mass": 57017.0, "length": 489, "protein_name": "Gamma-taxilin", "gene_name": "txlng", "organism": "Zebrafish", "refseq_name": "gamma-taxilin", "refseq_ac": "NP_001037776", "gene_names_uniprotkb": "txlng; wu:fc50d09; zgc:136409", "gene_names_refseq": "txlng; wu:fc50d09; zgc:136409", "protein_names_uniprotkb": "Gamma-taxilin", "protein_names_refseq": "gamma-taxilin", "tax_id": 7955, "disease": "", "pathway": " (dre:324984)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC117596.1, SRR26395028.1332772.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Jun 25, 2025 this sequence version replaced NP_001037776.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N942", "ec_number_list": "", "go_molecular_function": "GO:0019905 syntaxin binding", "go_cellular_component": "", "go_biological_process": "GO:0051726 regulation of cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1QZ20-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZ50-1", "uniprot_id": "F1QZ50_DANRE", "mass": 685166.0, "length": 6417, "protein_name": "Neuroblast differentiation-associated protein AHNAK", "gene_name": "ahnak", "organism": "Zebrafish", "refseq_name": "neuroblast differentiation-associated protein AHNAK", "refseq_ac": "XP_005173239", "gene_names_uniprotkb": "ahnak", "gene_names_refseq": "ahnak", "protein_names_uniprotkb": "Neuroblast differentiation-associated protein AHNAK", "protein_names_refseq": "neuroblast differentiation-associated protein AHNAK", "tax_id": 7955, "disease": "", "pathway": " (dre:559276)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BKH7", "ec_number_list": "", "go_molecular_function": "GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0043484 regulation of RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QZ50-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZ63-1", "uniprot_id": "F1QZ63_DANRE", "mass": 48031.0, "length": 427, "protein_name": "E3 ubiquitin-protein ligase RNF26", "gene_name": "rnf26", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase RNF26", "refseq_ac": "XP_005157651", "gene_names_uniprotkb": "rnf26", "gene_names_refseq": "rnf26", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RNF26; 2.3.2.27; RING finger protein 26", "protein_names_refseq": "E3 ubiquitin-protein ligase RNF26", "tax_id": 7955, "disease": "", "pathway": " (dre:793090)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; E3 ubiquitin-protein ligase that plays a key role in endosome organization by retaining vesicles in the perinuclear cloud. Acts as a platform for perinuclear positioning of the endosomal system by mediating ubiquitination of SQSTM1 through interaction with the ubiquitin conjugating enzyme UBE2J1. Ubiquitinated SQSTM1 attracts specific vesicle-associated adapters, forming a molecular bridge that restrains cognate vesicles in the perinuclear region and organizes the endosomal pathway for efficient cargo transport. Also acts as a regulator of type I interferon production in response to viral infection by mediating the formation of 'Lys-11'-linked polyubiquitin chains on TMEM173/STING, leading to stabilize TMEM173/STING. Also required to limit type I interferon response by promoting autophagic degradation of IRF3., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B4F7", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QZ63-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZ64-1", "uniprot_id": "F1QZ64_DANRE", "mass": 70087.0, "length": 613, "protein_name": "ATP-binding cassette sub-family F member 2", "gene_name": "abcf2a", "organism": "Zebrafish", "refseq_name": "ATP-binding cassette sub-family F member 2a", "refseq_ac": "NP_958472", "gene_names_uniprotkb": "abcf2a; abcf2; wu:fb04f06; wu:fc74f03; wu:fd58d07", "gene_names_refseq": "abcf2a; abcf2; wu:fb04f06; wu:fc74f03; wu:fd58d07", "protein_names_uniprotkb": "ATP-binding cassette sub-family F member 2", "protein_names_refseq": "ATP-binding cassette sub-family F member 2a; ATP-binding cassette, sub-family F (GCN20), member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:336770)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11116086;16124856;16631343;19092113;20438705;26047617;26469318;27189481;28694436;35096942", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01004389.1, BC047181.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH556650.1, EH577748.1, CT713297.2, BI709967.1, BE557347.1 and JBMGRA010000002.1. On Jan 10, 2013 this sequence version replaced NP_958472.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IBA2;A0A8N7V050", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QZ64-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZ65-1", "uniprot_id": "F1QZ65_DANRE", "mass": 34411.0, "length": 306, "protein_name": "Protein lifeguard 2a isoform X1", "gene_name": "faim2a", "organism": "Zebrafish", "refseq_name": "protein lifeguard 2a isoform X1", "refseq_ac": "XP_005163554", "gene_names_uniprotkb": "faim2a; zgc:110143", "gene_names_refseq": "faim2a; zgc:110143", "protein_names_uniprotkb": "Protein lifeguard 2a isoform X1", "protein_names_refseq": "protein lifeguard 2a isoform X1", "tax_id": 7955, "disease": "chronic obstructive pulmonary disease (Disease Ontology:DOID:3083)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BAP7;A0AC58GTA2", "ec_number_list": "", "go_molecular_function": "GO:0005262 calcium channel activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0043524 negative regulation of neuron apoptotic process;GO:1902042 negative regulation of extrinsic apoptotic signaling pathway via death domain receptors", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QZ65-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZ83-1", "uniprot_id": "F1QZ83_DANRE", "mass": 85888.0, "length": 735, "protein_name": "Nucleolar transcription factor 1", "gene_name": "ubtf", "organism": "Zebrafish", "refseq_name": "nucleolar transcription factor 1", "refseq_ac": "NP_001005395", "gene_names_uniprotkb": "ubtf; si:dz180g5.3; wu:fj38c10", "gene_names_refseq": "si:dz180g5.3; ubtf; wu:fj38c10", "protein_names_uniprotkb": "Nucleolar transcription factor 1", "protein_names_refseq": "nucleolar transcription factor 1; upstream binding transcription factor, RNA polymerase I", "tax_id": 7955, "disease": "childhood-onset neurodegeneration with brain atrophy (Disease Ontology:DOID:0070474)", "pathway": " (dre:368509); (R-DRE-73728); (R-DRE-73772); (R-DRE-73863)", "pathway_count": 4, "publication_count": 6, "publication_id_list": "24002024;24240475;26469318;27189481;28252024;34791311", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588720.2144965.1, SRR32588735.1726989.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IDG0;A0A8M1N2F7;A0AC58IGH3", "ec_number_list": "", "go_molecular_function": "GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding;GO:0001181 RNA polymerase I general transcription initiation factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006360 transcription by RNA polymerase I;GO:0045943 positive regulation of transcription by RNA polymerase I", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QZ83-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZA0-1", "uniprot_id": "F1QZA0_DANRE", "mass": 52370.0, "length": 475, "protein_name": "Uncharacterized protein LOC100038803", "gene_name": "slc30a1b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100038803", "refseq_ac": "NP_001083052", "gene_names_uniprotkb": "slc30a1b; zgc:162909; znt1", "gene_names_refseq": "slc30a1b; zgc:162909; znt1", "protein_names_uniprotkb": "Uncharacterized protein LOC100038803", "protein_names_refseq": "solute carrier family 30 (zinc transporter), member 1b; uncharacterized protein LOC100038803", "tax_id": 7955, "disease": "", "pathway": " (dre:100038803); (R-DRE-435368)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "20932299;20937081;24301558;27189481;34977877;36063588", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC134142.1, GFIL01038492.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On or before Jun 9, 2016 this sequence version replaced XP_005158889.1, NP_001083052.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDB8", "ec_number_list": "", "go_molecular_function": "GO:0005385 zinc ion transmembrane transporter activity;GO:0019855 calcium channel inhibitor activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0010312 detoxification of zinc ion;GO:0071577 zinc ion transmembrane transport;GO:0097325 melanocyte proliferation;GO:0006882 intracellular zinc ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QZA0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZA4-1", "uniprot_id": "F1QZA4_DANRE", "mass": 42772.0, "length": 391, "protein_name": "Isocitrate dehydrogenase [NAD] subunit, mitochondrial", "gene_name": "idh3g", "organism": "Zebrafish", "refseq_name": "isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial", "refseq_ac": "NP_001230101", "gene_names_uniprotkb": "idh3g; fa01b02; im:7054683; wu:fa01b02; wu:fc88f06; zgc:113076", "gene_names_refseq": "fa01b02; idh3g; im:7054683; wu:fa01b02; wu:fc88f06; zgc:113076", "protein_names_uniprotkb": "Isocitrate dehydrogenase [NAD] subunit, mitochondrial", "protein_names_refseq": "isocitrate dehydrogenase (NAD(+)) 3 gamma; isocitrate dehydrogenase 3 (NAD+) gamma; isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial", "tax_id": 7955, "disease": "early infantile epileptic encephalopathy (Disease Ontology:DOID:0050709)", "pathway": " (dre:550579); (R-DRE-71403)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "19500364;25778530;26469318;28252024;31094706;34982026", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01044611.1, GDQQ01002043.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH555117.1, JBMGRA010000023.1, EH448219.1 and EH576227.1. On Jul 31, 2011 this sequence version replaced XP_699839.4. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Regulatory subunit which plays a role in the allosteric regulation of the enzyme catalyzing the decarboxylation of isocitrate (ICT) into alpha-ketoglutarate. The heterodimer composed of the alpha (IDH3A) and beta (IDH3B) subunits and the heterodimer composed of the alpha (IDH3A) and gamma (IDH3G) subunits, have considerable basal activity but the full activity of the heterotetramer (containing two subunits of IDH3A, one of IDH3B and one of IDH3G) requires the assembly and cooperative function of both heterodimers., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3Y1", "ec_number_list": "", "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0051287 NAD binding;GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0006102 isocitrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1QZA4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZB0-1", "uniprot_id": "F1QZB0_DANRE", "mass": 22220.0, "length": 206, "protein_name": "Cysteine-rich protein 2", "gene_name": "crip2", "organism": "Zebrafish", "refseq_name": "cysteine-rich protein 2", "refseq_ac": "NP_998662", "gene_names_uniprotkb": "crip2; wu:fb30h10; zgc:55408", "gene_names_refseq": "crip2; wu:fb30h10; zgc:55408", "protein_names_uniprotkb": "Cysteine-rich protein 2", "protein_names_refseq": "cysteine-rich protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:554826)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "18292601;21288905;22438865;22488653;23201577;28258200;29669692;31140974;32094112;32493965", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044391.1, GDQH01009372.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On or before Feb 22, 2008 this sequence version replaced XP_702677.1, XP_689198.1, NP_998662.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Data suggest a specific role for Wnt3a in the development of cardiac NCCs; propose that this function of wnt3a in r6 is partially mediated by crip2 expression in the premigratory cardiac NCCs, which subsequently affects cardiac function and PA patterning, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFB8", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "", "go_biological_process": "GO:0007507 heart development;GO:0060047 heart contraction;GO:0001568 blood vessel development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QZB0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZM4-1", "uniprot_id": "F1QZM4_DANRE", "mass": 19847.0, "length": 177, "protein_name": "BCL2 interacting protein 4", "gene_name": "bnip4", "organism": "Zebrafish", "refseq_name": "BCL2 interacting protein 4", "refseq_ac": "NP_997858", "gene_names_uniprotkb": "bnip4; nip3b; wu:fc54d07; zgc:123120", "gene_names_refseq": "bnip4; nip3b; wu:fc54d07; zgc:123120", "protein_names_uniprotkb": "BCL2 interacting protein 4", "protein_names_refseq": "BCL2 interacting protein 4; BCL2/adenovirus E1B 19kDa interacting protein 3b; BCL2/adenovirus E1B interacting protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:568155)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "15520368;21792176;25294025;33329019;34206401;34453946;35264012;36768797", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC067174.1, BC078278.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB966413.1, BC108082.1 and BX005375.9. On or before Apr 23, 2008 this sequence version replaced NP_001032786.1, NP_997858.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHK5", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005741 mitochondrial outer membrane;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0043065 positive regulation of apoptotic process;GO:0097345 mitochondrial outer membrane permeabilization;GO:0043068 positive regulation of programmed cell death", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1QZM4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZN0-1", "uniprot_id": "F1QZN0_DANRE", "mass": 28600.0, "length": 251, "protein_name": "Gap junction protein", "gene_name": "gjb9a", "organism": "Zebrafish", "refseq_name": "gap junction protein beta 9a isoform X1", "refseq_ac": "XP_005169874", "gene_names_uniprotkb": "gjb9a; cx28.6; zgc:194305", "gene_names_refseq": "cx28.6; gjb9a; zgc:194305", "protein_names_uniprotkb": "Gap junction protein", "protein_names_refseq": "gap junction protein beta 9a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:404728)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "16337772;17338632;18649188;27292574;31666235;32160866;35325106", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BH46", "ec_number_list": "", "go_molecular_function": "GO:0005243 gap junction channel activity", "go_cellular_component": "GO:0005922 connexin complex", "go_biological_process": "GO:0007267 cell-cell signaling;GO:0007154 cell communication", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1QZN0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZU6-1", "uniprot_id": "F1QZU6_DANRE", "mass": 43928.0, "length": 395, "protein_name": "Protein Z, vitamin K-dependent plasma glycoprotein b precursor", "gene_name": "prozb", "organism": "Zebrafish", "refseq_name": "protein Z, vitamin K-dependent plasma glycoprotein b precursor", "refseq_ac": "NP_001313449", "gene_names_uniprotkb": "prozb; si:zfos-1962a1.5", "gene_names_refseq": "prozb; si:zfos-1962a1.5", "protein_names_uniprotkb": "Protein Z, vitamin K-dependent plasma glycoprotein b precursor", "protein_names_refseq": "protein Z, vitamin K-dependent plasma glycoprotein b precursor", "tax_id": 7955, "disease": "stroke (Disease Ontology:DOID:0051061); Behcet's disease (Disease Ontology:DOID:13241); brain ischemia (Disease Ontology:DOID:2316)", "pathway": " (dre:558106); (R-DRE-159763); (R-DRE-159782); (R-DRE-9769739)", "pathway_count": 4, "publication_count": 4, "publication_id_list": "26469318;27189481;33829511;39358551", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH487609.1, BC142857.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH487609.1, EH595698.1 and EH513999.1. On May 20, 2016 this sequence version replaced XP_005168066.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3F2", "ec_number_list": "", "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis;GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QZU6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZV9-1", "uniprot_id": "F1QZV9_DANRE", "mass": 62383.0, "length": 539, "protein_name": "Potassium voltage-gated channel subfamily V member 2", "gene_name": "si:rp71-39b20.4", "organism": "Zebrafish", "refseq_name": "potassium voltage-gated channel subfamily V member 2", "refseq_ac": "XP_005171298", "gene_names_uniprotkb": "si:rp71-39b20.4", "gene_names_refseq": "si:rp71-39b20.4", "protein_names_uniprotkb": "Potassium voltage-gated channel subfamily V member 2", "protein_names_refseq": "potassium voltage-gated channel subfamily V member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:563472)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BIH5", "ec_number_list": "", "go_molecular_function": "GO:0015459 potassium channel regulator activity;GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0016020 membrane;GO:0008076 voltage-gated potassium channel complex", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0001508 action potential;GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QZV9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZW7-1", "uniprot_id": "F1QZW7_DANRE", "mass": 91177.0, "length": 820, "protein_name": "Interleukin enhancer-binding factor 3a isoform X1", "gene_name": "ilf3a", "organism": "Zebrafish", "refseq_name": "interleukin enhancer-binding factor 3a isoform X1", "refseq_ac": "XP_009300428", "gene_names_uniprotkb": "ilf3a; fc28f07; wu:fc28f07; wu:fi34h10; zgc:113842", "gene_names_refseq": "fc28f07; ilf3a; wu:fc28f07; wu:fi34h10; zgc:113842", "protein_names_uniprotkb": "Interleukin enhancer-binding factor 3a isoform X1", "protein_names_refseq": "interleukin enhancer-binding factor 3a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:324431); (R-DRE-9762293); (R-DRE-9833482)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3BA65", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003725 double-stranded RNA binding;GO:0003727 single-stranded RNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QZW7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QZX9-1", "uniprot_id": "F1QZX9_DANRE", "mass": 13530.0, "length": 119, "protein_name": "Cocaine- and amphetamine-regulated transcript protein-like precursor", "gene_name": "cart3", "organism": "Zebrafish", "refseq_name": "cocaine- and amphetamine-regulated transcript protein-like precursor", "refseq_ac": "NP_001314747", "gene_names_uniprotkb": "cart3; CART2b; cart1; cartll; cartp", "gene_names_refseq": "CART2b; cart1; cart3; cartll; cartp", "protein_names_uniprotkb": "Cocaine- and amphetamine-regulated transcript protein-like precursor", "protein_names_refseq": "cocaine- and amphetamine-regulated transcript protein 2b; cocaine- and amphetamine-regulated transcript protein-like precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:557301)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "17254820;21078323;22009187;22700585;23458150;31882937;32612127;34089707;35853004;39519205", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01022959.1, GDQH01041780.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA4476800 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On May 26, 2016 this sequence version replaced XP_685429.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8C3", "ec_number_list": "", "go_molecular_function": "GO:0005184 neuropeptide hormone activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0043410 positive regulation of MAPK cascade;GO:0008343 adult feeding behavior;GO:0009267 cellular response to starvation;GO:0032099 negative regulation of appetite", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QZX9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R019-1", "uniprot_id": "F1R019_DANRE", "mass": 153095.0, "length": 1341, "protein_name": "Son of sevenless homolog 2", "gene_name": "sos2", "organism": "Zebrafish", "refseq_name": "son of sevenless homolog 2", "refseq_ac": "NP_001334612", "gene_names_uniprotkb": "sos2; si:ch211-67f24.8", "gene_names_refseq": "si:ch211-67f24.8; sos2", "protein_names_uniprotkb": "Son of sevenless homolog 2", "protein_names_refseq": "son of sevenless homolog 2", "tax_id": 7955, "disease": "Noonan syndrome 9 (Disease Ontology:DOID:0060587)", "pathway": " (dre:561670); (R-DRE-193648); (R-DRE-416482); (R-DRE-8983432); (R-DRE-9013149)", "pathway_count": 5, "publication_count": 6, "publication_id_list": "20980353;26469318;27189481;27920155;29021367;37155312", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.1718224.1, SRR32588734.2477379.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On Dec 8, 2016 this sequence version replaced XP_005157084.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAP3", "ec_number_list": "", "go_molecular_function": "GO:0046982 protein heterodimerization activity;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007265 Ras protein signal transduction;GO:0048793 pronephros development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1R019-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R044-1", "uniprot_id": "F1R044_DANRE", "mass": 19927.0, "length": 174, "protein_name": "Large ribosomal subunit protein bL32m", "gene_name": "mrpl32", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein bL32m", "refseq_ac": "NP_001038905", "gene_names_uniprotkb": "mrpl32; zgc:153328", "gene_names_refseq": "mrpl32; zgc:153328", "protein_names_uniprotkb": "Large ribosomal subunit protein bL32m; 39S ribosomal protein L32, mitochondrial", "protein_names_refseq": "large ribosomal subunit protein bL32m", "tax_id": 7955, "disease": "", "pathway": " (dre:751730); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9837999); (R-DRE-9937383)", "pathway_count": 5, "publication_count": 3, "publication_id_list": "26469318;34111665;36283702", "class_list": "", "function": "Component of the mitochondrial large ribosomal subunit (mt-LSU). The mitochondrial ribosome (mitoribosome) is a large ribonucleoprotein complex responsible for the synthesis of proteins inside mitochondria., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAP7", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R044-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R045-1", "uniprot_id": "F1R045_DANRE", "mass": 264961.0, "length": 2327, "protein_name": "P-type phospholipid transporter", "gene_name": "abca4b", "organism": "Zebrafish", "refseq_name": "retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1", "refseq_ac": "XP_021322694", "gene_names_uniprotkb": "abca4b", "gene_names_refseq": "abca4b", "protein_names_uniprotkb": "P-type phospholipid transporter; 7.6.2.1", "protein_names_refseq": "retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1", "tax_id": 7955, "disease": "Stargardt disease (Disease Ontology:DOID:0050817); retinitis pigmentosa 91 (Disease Ontology:DOID:0061106); age related macular degeneration 2 (Disease Ontology:DOID:0110015); retinitis pigmentosa 19 (Disease Ontology:DOID:0110354); cone-rod dystrophy 3 (Disease Ontology:DOID:0111013); retinitis pigmentosa (Disease Ontology:DOID:10584); macular degeneration (Disease Ontology:DOID:4448); retinal degeneration (Disease Ontology:DOID:8466); fundus dystrophy (Disease Ontology:DOID:8501)", "pathway": " (dre:555506); (R-DRE-2453902); (R-DRE-382556)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 9, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PDW2", "ec_number_list": "7.6.2.1", "go_molecular_function": "GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0016887 ATP hydrolysis activity;GO:0005548 phospholipid transporter activity;GO:0140326 ATPase-coupled intramembrane lipid transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0006869 lipid transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R045-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0A8-1", "uniprot_id": "F1R0A8_DANRE", "mass": 51105.0, "length": 463, "protein_name": "Synapsin-2a", "gene_name": "syn2a", "organism": "Zebrafish", "refseq_name": "synapsin-2a", "refseq_ac": "NP_001002597", "gene_names_uniprotkb": "syn2a; syn1; syn2; zgc:92311", "gene_names_refseq": "syn1; syn2a; syn2; zgc:92311", "protein_names_uniprotkb": "Synapsin-2a", "protein_names_refseq": "synapsin II; synapsin-2a; synapsin2", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); epilepsy (Disease Ontology:DOID:1826); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:436870)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "19460430;22866812;23602570;24248357;25239370;34699755;35430362;35550141;35617773;36232737", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075998.1, GFIL01040252.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Dec 9, 2010 this sequence version replaced NP_001002597.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0R8", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0030672 synaptic vesicle membrane", "go_biological_process": "GO:0097091 synaptic vesicle clustering;GO:0050808 synapse organization;GO:0007269 neurotransmitter secretion", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1R0A8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0I2-1", "uniprot_id": "F1R0I2_DANRE", "mass": 20881.0, "length": 185, "protein_name": "Apolipoprotein D", "gene_name": "apoda.1", "organism": "Zebrafish", "refseq_name": "apolipoprotein Da, duplicate 1 precursor", "refseq_ac": "NP_001070050", "gene_names_uniprotkb": "apoda.1; apod; zgc:153593", "gene_names_refseq": "apoda.1; apod; zgc:153593", "protein_names_uniprotkb": "Apolipoprotein D", "protein_names_refseq": "apoda; apolipoprotein Da, duplicate 1 precursor; apolipoprotein D", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652); gestational diabetes (Disease Ontology:DOID:11714); type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:767642)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "21195142;32203715;35686059;37024546", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAX4", "ec_number_list": "", "go_molecular_function": "GO:0008289 lipid binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0006869 lipid transport;GO:0007420 brain development;GO:0000302 response to reactive oxygen species;GO:0042246 tissue regeneration", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1R0I2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0J8-1", "uniprot_id": "F1R0J8_DANRE", "mass": 52369.0, "length": 496, "protein_name": "Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex", "gene_name": "pdhx", "organism": "Zebrafish", "refseq_name": "pyruvate dehydrogenase protein X component, mitochondrial", "refseq_ac": "NP_956854", "gene_names_uniprotkb": "pdhx; zgc:66110; zgc:85977", "gene_names_refseq": "pdhx; zgc:66110; zgc:85977", "protein_names_uniprotkb": "Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; 2.3.1.-", "protein_names_refseq": "pyruvate dehydrogenase protein X component, mitochondrial", "tax_id": 7955, "disease": "sarcoma (Disease Ontology:DOID:1115); pyruvate decarboxylase deficiency (Disease Ontology:DOID:3649)", "pathway": " (dre:393532); (R-DRE-204174); (R-DRE-5362517); (R-DRE-9861559)", "pathway_count": 4, "publication_count": 3, "publication_id_list": "20828405;26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056571.1, SRR32588725.29378320.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Jun 12, 2025 this sequence version replaced NP_956854.2., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHE0", "ec_number_list": "2.7.11.-;1.2.4.1;2.3.1.-", "go_molecular_function": "GO:0016746 acyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0045254 pyruvate dehydrogenase complex", "go_biological_process": "GO:0006086 pyruvate decarboxylation to acetyl-CoA", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R0J8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0M4-1", "uniprot_id": "F1R0M4_DANRE", "mass": 54439.0, "length": 541, "protein_name": "RNA-binding protein FUS", "gene_name": "fus", "organism": "Zebrafish", "refseq_name": "RNA-binding protein FUS", "refseq_ac": "NP_957377", "gene_names_uniprotkb": "fus; zgc:56390", "gene_names_refseq": "fus; zgc:56390", "protein_names_uniprotkb": "RNA-binding protein FUS", "protein_names_refseq": "16) in malignant liposarcoma); RNA-binding protein FUS; fusion (involved in t(12", "tax_id": 7955, "disease": "amyotrophic lateral sclerosis type 6 (Disease Ontology:DOID:0060198); essential tremor 4 (Disease Ontology:DOID:0111431); sarcoma (Disease Ontology:DOID:1115); neurodegenerative disease (Disease Ontology:DOID:1289); amyotrophic lateral sclerosis (Disease Ontology:DOID:332); liposarcoma (Disease Ontology:DOID:3382)", "pathway": " (dre:394058); (R-DRE-72163); (R-DRE-72203); (R-DRE-9770562)", "pathway_count": 4, "publication_count": 10, "publication_id_list": "21829392;23306105;23771027;24117801;24912067;32676526;33415684;34193962;36009362;38474336", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395063.474087.1, SRR26395015.894809.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 10, 2025 this sequence version replaced NP_957377.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; DNA/RNA-binding protein that plays a role in various cellular processes such as transcription regulation, RNA splicing, RNA transport, DNA repair and damage response. Binds to ssRNA containing the consensus sequence 5'-AGGUAA-3'. Binds to nascent pre-mRNAs and acts as a molecular mediator between RNA polymerase II and U1 small nuclear ribonucleoprotein thereby coupling transcription and splicing. Also binds its own pre-mRNA and autoregulates its expression; this autoregulation mechanism is mediated by non-sense-mediated decay. Plays a role in DNA repair mechanisms by promoting D-loop formation and homologous recombination during DNA double-strand break repair. In neuronal cells, plays crucial roles in dendritic spine formation and stability, RNA transport, mRNA stability and synaptic homeostasis., [UniProtKB, UniProtKB, UniProtKB]; Identification of a novel interaction of FUS and syntaphilin may explain synaptic and mitochondrial abnormalities caused by ALS mutations. Publication Status: Online-Only, [RefSeq, PubMed]; TARDBP and FUS act in a pathogenic pathway that is independent of SOD1., [RefSeq, PubMed]; Zebrafish CCNF and FUS Mediate Stress-Specific Motor Responses. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFK2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0008270 zinc ion binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006396 RNA processing;GO:0006355 regulation of DNA-templated transcription;GO:0048675 axon extension", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1R0M4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0N0-1", "uniprot_id": "F1R0N0_DANRE", "mass": 50258.0, "length": 435, "protein_name": "Leucine-rich repeat-containing protein 17 isoform X1", "gene_name": "lrrc17", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat-containing protein 17 precursor", "refseq_ac": "NP_991102", "gene_names_uniprotkb": "lrrc17; cb314; sb:cb314; wu:fb08f12; zgc:77411", "gene_names_refseq": "cb314; lrrc17; sb:cb314; wu:fb08f12; zgc:77411", "protein_names_uniprotkb": "Leucine-rich repeat-containing protein 17 isoform X1", "protein_names_refseq": "leucine-rich repeat-containing protein 17 precursor", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "32988884", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065605.1, SRR32588716.3422780.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On or before Sep 16, 2025 this sequence version replaced XP_009298620.1, NP_991102.1., [RefSeq]; LRRC17 Is Linked to Prognosis of Ovarian Cancer Through a p53-dependent Anti-apoptotic Function., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ARP9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1R0N0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0Q1-1", "uniprot_id": "F1R0Q1_DANRE", "mass": 53593.0, "length": 489, "protein_name": "Solute carrier family 2, facilitated glucose transporter member 1", "gene_name": "slc2a1b", "organism": "Zebrafish", "refseq_name": "solute carrier family 2, facilitated glucose transporter member 1", "refseq_ac": "XP_002662574", "gene_names_uniprotkb": "slc2a1b", "gene_names_refseq": "slc2a1b", "protein_names_uniprotkb": "Solute carrier family 2, facilitated glucose transporter member 1", "protein_names_refseq": "solute carrier family 2, facilitated glucose transporter member 1", "tax_id": 7955, "disease": "myelomeningocele (Disease Ontology:DOID:0060326); glucose transporter type 1 deficiency syndrome (Disease Ontology:DOID:0070560); glucose transporter type 1 deficiency syndrome 1 (Disease Ontology:DOID:0070561); dystonia 9 (Disease Ontology:DOID:0090044); glucose transporter type 1 deficiency syndrome 2 (Disease Ontology:DOID:0090045); Hirschsprung's disease (Disease Ontology:DOID:10487); pre-eclampsia (Disease Ontology:DOID:10591); Alzheimer's disease (Disease Ontology:DOID:10652); childhood absence epilepsy (Disease Ontology:DOID:1825); nephroblastoma (Disease Ontology:DOID:2154); hemangioma (Disease Ontology:DOID:255); diabetes mellitus (Disease Ontology:DOID:9351); type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:100321338); (R-DRE-189200); (R-DRE-196836); (R-DRE-422356); (R-DRE-5653890)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 14, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RR10", "ec_number_list": "", "go_molecular_function": "GO:0055056 D-glucose transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane;GO:0016324 apical plasma membrane", "go_biological_process": "GO:0070837 dehydroascorbic acid transport;GO:0032868 response to insulin;GO:0002040 sprouting angiogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R0Q1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0Z8-1", "uniprot_id": "F1R0Z8_DANRE", "mass": 15134.0, "length": 135, "protein_name": "Prefoldin subunit 4", "gene_name": "pfdn4", "organism": "Zebrafish", "refseq_name": "prefoldin subunit 4", "refseq_ac": "NP_001373438", "gene_names_uniprotkb": "pfdn4; si:dkey-222e15.2", "gene_names_refseq": "pfdn4; si:dkey-222e15.2", "protein_names_uniprotkb": "Prefoldin subunit 4", "protein_names_refseq": "prefoldin subunit 4", "tax_id": 7955, "disease": "", "pathway": " (dre:572231)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01015794.1, GFIL01030005.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Aug 29, 2020 this sequence version replaced XP_002666565.1., [RefSeq]; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RL59", "ec_number_list": "", "go_molecular_function": "GO:0051082 unfolded protein binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016272 prefoldin complex", "go_biological_process": "GO:0006457 protein folding", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1R0Z8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R116-1", "uniprot_id": "F1R116_DANRE", "mass": 53870.0, "length": 487, "protein_name": "G-protein coupled receptor 37-like 1", "gene_name": "gpr37l1b", "organism": "Zebrafish", "refseq_name": "G-protein coupled receptor 37-like 1", "refseq_ac": "XP_696192", "gene_names_uniprotkb": "gpr37l1b", "gene_names_refseq": "gpr37l1b", "protein_names_uniprotkb": "G-protein coupled receptor 37-like 1", "protein_names_refseq": "G-protein coupled receptor 37-like 1", "tax_id": 7955, "disease": "", "pathway": " (dre:567796); (R-DRE-375276); (R-DRE-418594)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_696192.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PRC7", "ec_number_list": "", "go_molecular_function": "GO:0008528 G protein-coupled peptide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0043235 receptor complex;GO:0042995 cell projection", "go_biological_process": "GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway;GO:0043410 positive regulation of MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R116-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R118-1", "uniprot_id": "F1R118_DANRE", "mass": 53955.0, "length": 480, "protein_name": "beta-N-acetylhexosaminidase", "gene_name": "hexd", "organism": "Zebrafish", "refseq_name": "hexosaminidase D", "refseq_ac": "NP_001070635", "gene_names_uniprotkb": "hexd; fj33c04; hexdc; wu:fj33c04; zgc:152869", "gene_names_refseq": "fj33c04; hexdc; hexd; wu:fj33c04; zgc:152869", "protein_names_uniprotkb": "beta-N-acetylhexosaminidase; 3.2.1.52", "protein_names_refseq": "hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing; hexosaminidase D", "tax_id": 7955, "disease": "", "pathway": " (dre:565372)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01045093.1, GDQH01022786.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Aug 7, 2009 this sequence version replaced NP_001070635.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NBL6", "ec_number_list": "", "go_molecular_function": "GO:0015929 hexosaminidase activity;GO:0004563 beta-N-acetylhexosaminidase activity", "go_cellular_component": "", "go_biological_process": "GO:0005975 carbohydrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R118-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R121-1", "uniprot_id": "F1R121_DANRE", "mass": 28530.0, "length": 247, "protein_name": "Derlin", "gene_name": "derl3", "organism": "Zebrafish", "refseq_name": "derlin-3", "refseq_ac": "NP_957197", "gene_names_uniprotkb": "derl3; zgc:63991", "gene_names_refseq": "derl3; zgc:63991", "protein_names_uniprotkb": "Derlin", "protein_names_refseq": "Der1-like domain family, member 3; derlin-3", "tax_id": 7955, "disease": "", "pathway": " (dre:393877); (R-DRE-382556); (R-DRE-9931269)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "12477932", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01059526.1, GFIL01008531.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1 and CK026866.1. On Feb 27, 2016 this sequence version replaced NP_957197.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PI68", "ec_number_list": "", "go_molecular_function": "GO:0005047 signal recognition particle binding", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0030968 endoplasmic reticulum unfolded protein response;GO:0036503 ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1R121-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R143-1", "uniprot_id": "F1R143_DANRE", "mass": 47998.0, "length": 436, "protein_name": "Zinc finger protein 395a isoform X1", "gene_name": "znf395a", "organism": "Zebrafish", "refseq_name": "zinc finger protein 395a isoform X1", "refseq_ac": "XP_005169886", "gene_names_uniprotkb": "znf395a; fa14e01; wu:fa14e01; zgc:158367", "gene_names_refseq": "fa14e01; wu:fa14e01; zgc:158367; znf395a", "protein_names_uniprotkb": "Zinc finger protein 395a isoform X1", "protein_names_refseq": "zinc finger protein 395a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:571403)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "25556858;26469318;27189481;30061596;38270285", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BH36", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R143-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R1F1-1", "uniprot_id": "F1R1F1_DANRE", "mass": 63636.0, "length": 679, "protein_name": "Collagen alpha-3(IX) chain precursor", "gene_name": "col9a3", "organism": "Zebrafish", "refseq_name": "collagen alpha-3(IX) chain precursor", "refseq_ac": "NP_001292502", "gene_names_uniprotkb": "col9a3; cb367; sb:cb367; si:ch73-162j3.1; wu:fa04f01", "gene_names_refseq": "cb367; col9a3; sb:cb367; si:ch73-162j3.1; wu:fa04f01", "protein_names_uniprotkb": "Collagen alpha-3(IX) chain precursor", "protein_names_refseq": "alpha 3 type IX collagen; collagen alpha-3(IX) chain precursor", "tax_id": 7955, "disease": "multiple epiphyseal dysplasia 3 (Disease Ontology:DOID:0070304); Stickler syndrome (Disease Ontology:DOID:0080046); osteochondrodysplasia (Disease Ontology:DOID:2256)", "pathway": " (dre:567110)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "26469318;27189481;29499231;30312775;33501917;34332081;35134499;36458546", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155328.1, GFIL01004530.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Mar 19, 2015 this sequence version replaced XP_695491.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1U1", "ec_number_list": "", "go_molecular_function": "GO:0030020 extracellular matrix structural constituent conferring tensile strength", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1R1F1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R1N1-1", "uniprot_id": "F1R1N1_DANRE", "mass": 49397.0, "length": 451, "protein_name": "Transcription factor E3b isoform X1", "gene_name": "tfe3b", "organism": "Zebrafish", "refseq_name": "transcription factor E3b isoform X1", "refseq_ac": "XP_005169362", "gene_names_uniprotkb": "tfe3b; si:dkey-13a21.9; zK13A21.9", "gene_names_refseq": "si:dkey-13a21.9; tfe3b; zK13A21.9", "protein_names_uniprotkb": "Transcription factor E3b isoform X1", "protein_names_refseq": "transcription factor E3b isoform X1", "tax_id": 7955, "disease": "lysosomal storage disease (Disease Ontology:DOID:3211); renal cell carcinoma (Disease Ontology:DOID:4450)", "pathway": " (dre:564996)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11543618;19449054;21932325;33852860;34088109;36042265;36044568;36843607", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGL1;A0AC58GQZ5;X1WFJ2", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0006959 humoral immune response", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1R1N1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R1Q8-1", "uniprot_id": "F1R1Q8_DANRE", "mass": 72582.0, "length": 645, "protein_name": "Poly [ADP-ribose] polymerase", "gene_name": "parp6b", "organism": "Zebrafish", "refseq_name": "protein mono-ADP-ribosyltransferase PARP6 isoform X1", "refseq_ac": "XP_009296376", "gene_names_uniprotkb": "parp6b", "gene_names_refseq": "parp6b", "protein_names_uniprotkb": "Poly [ADP-ribose] polymerase; 2.4.2.-; PARP", "protein_names_refseq": "protein mono-ADP-ribosyltransferase PARP6 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100002364)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Mono-ADP-ribosyltransferase that mediates mono-ADP-ribosylation of target proteins., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3APT9;A0AC58IYQ9", "ec_number_list": "2.4.2.-;2.4.2.30", "go_molecular_function": "GO:0019900 kinase binding;GO:0043539 protein serine/threonine kinase activator activity;GO:0016779 nucleotidyltransferase activity;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0016020 membrane;GO:0071782 endoplasmic reticulum tubular network", "go_biological_process": "GO:0030968 endoplasmic reticulum unfolded protein response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R1Q8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R1S8-1", "uniprot_id": "F1R1S8_DANRE", "mass": 39775.0, "length": 367, "protein_name": "Glucose-fructose oxidoreductase domain-containing protein 2", "gene_name": "gfod2", "organism": "Zebrafish", "refseq_name": "glucose-fructose oxidoreductase domain-containing protein 2", "refseq_ac": "NP_001071214", "gene_names_uniprotkb": "gfod2; fa92g04; wu:fa92g04; zgc:153587", "gene_names_refseq": "fa92g04; gfod2; wu:fa92g04; zgc:153587", "protein_names_uniprotkb": "Glucose-fructose oxidoreductase domain-containing protein 2", "protein_names_refseq": "glucose-fructose oxidoreductase domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:777639)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "20828405;25803583;26469318;32197942", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC125879.1, SRR26395017.564775.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On May 1, 2009 this sequence version replaced NP_001071214.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Distribution of transcripts of the GFOD gene family members gfod1 and gfod2 in the zebrafish central nervous system., [RefSeq, PubMed]; Promotes matrix assembly., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NC49", "ec_number_list": "", "go_molecular_function": "GO:0000166 nucleotide binding;GO:0016491 oxidoreductase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1R1S8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R1Z1-1", "uniprot_id": "F1R1Z1_DANRE", "mass": 25889.0, "length": 230, "protein_name": "Secretory carrier-associated membrane protein", "gene_name": "scamp5b", "organism": "Zebrafish", "refseq_name": "secretory carrier-associated membrane protein 5 isoform X1", "refseq_ac": "XP_001343683", "gene_names_uniprotkb": "scamp5b", "gene_names_refseq": "scamp5b", "protein_names_uniprotkb": "Secretory carrier-associated membrane protein; Secretory carrier membrane protein", "protein_names_refseq": "secretory carrier-associated membrane protein 5 isoform X1", "tax_id": 7955, "disease": "epilepsy (Disease Ontology:DOID:1826)", "pathway": " (dre:100004357)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PSS4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0032588 trans-Golgi network membrane;GO:0055038 recycling endosome membrane;GO:0030672 synaptic vesicle membrane", "go_biological_process": "GO:0015031 protein transport;GO:0006887 exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R1Z1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R205-1", "uniprot_id": "F1R205_DANRE", "mass": 39790.0, "length": 355, "protein_name": "Protein Wnt", "gene_name": "wnt6b", "organism": "Zebrafish", "refseq_name": "protein Wnt-6", "refseq_ac": "XP_003199237", "gene_names_uniprotkb": "wnt6b", "gene_names_refseq": "wnt6b", "protein_names_uniprotkb": "Protein Wnt", "protein_names_refseq": "protein Wnt-6", "tax_id": 7955, "disease": "", "pathway": " (dre:561831); (R-DRE-3238698)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003199237.1. COMPLETENESS: full length., [RefSeq]; Ligand for members of the frizzled family of seven transmembrane receptors., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RNK5", "ec_number_list": "", "go_molecular_function": "GO:0005109 frizzled binding;GO:0005125 cytokine activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0030182 neuron differentiation;GO:0060070 canonical Wnt signaling pathway;GO:0048513 animal organ development;GO:0045165 cell fate commitment", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R205-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R215-1", "uniprot_id": "F1R215_DANRE", "mass": 95917.0, "length": 853, "protein_name": "General transcription factor 3C polypeptide 2 isoform X1", "gene_name": "gtf3c2", "organism": "Zebrafish", "refseq_name": "general transcription factor 3C polypeptide 2 isoform X1", "refseq_ac": "XP_005160885", "gene_names_uniprotkb": "gtf3c2; si:ch211-245h14.3", "gene_names_refseq": "gtf3c2; si:ch211-245h14.3", "protein_names_uniprotkb": "General transcription factor 3C polypeptide 2 isoform X1", "protein_names_refseq": "general transcription factor 3C polypeptide 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563394); (R-DRE-76061); (R-DRE-76066)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "26469318;27189481;30615915;31097478", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B813;A0AC58I403;A0AC58I408", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000127 transcription factor TFIIIC complex;GO:0005634 nucleus", "go_biological_process": "GO:0006383 transcription by RNA polymerase III;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1R215-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R238-1", "uniprot_id": "F1R238_DANRE", "mass": 33230.0, "length": 294, "protein_name": "Secreted frizzled-related protein 2", "gene_name": "sfrp2", "organism": "Zebrafish", "refseq_name": "secreted frizzled-related protein 2 precursor", "refseq_ac": "NP_001070852", "gene_names_uniprotkb": "sfrp2; hm:zeh0225; sb:eu233; zeh0225; zgc:153618", "gene_names_refseq": "hm:zeh0225r; hm:zeh0225; sb:eu233; sfrp2; zeh0225; zgc:153618", "protein_names_uniprotkb": "Secreted frizzled-related protein 2", "protein_names_refseq": "secreted frizzled-related protein 2 precursor", "tax_id": 7955, "disease": "myocardial infarction (Disease Ontology:DOID:5844)", "pathway": " (dre:566878)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16504595;16545988;16854974;19393641;21911385;28705894;28807781;30411347;30561090;33582796", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01034987.1, SRR26395015.859989.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 13, 2009 this sequence version replaced NP_001070852.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NB76", "ec_number_list": "", "go_molecular_function": "GO:0017147 Wnt-protein binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0030154 cell differentiation;GO:0060070 canonical Wnt signaling pathway;GO:0035567 non-canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1R238-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R2D9-1", "uniprot_id": "F1R2D9_DANRE", "mass": 45417.0, "length": 389, "protein_name": "Protein kinase C and casein kinase substrate in neurons protein 3", "gene_name": "si:ch211-51c14.1", "organism": "Zebrafish", "refseq_name": "protein kinase C and casein kinase substrate in neurons protein 3", "refseq_ac": "XP_697258", "gene_names_uniprotkb": "si:ch211-51c14.1", "gene_names_refseq": "si:ch211-51c14.1", "protein_names_uniprotkb": "Protein kinase C and casein kinase substrate in neurons protein 3", "protein_names_refseq": "protein kinase C and casein kinase substrate in neurons protein 3", "tax_id": 7955, "disease": "Huntington's disease (Disease Ontology:DOID:12858); neurodegenerative disease (Disease Ontology:DOID:1289)", "pathway": " (dre:568811)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_697258.1. COMPLETENESS: full length., [RefSeq]; Plays a role in endocytosis and regulates internalization of plasma membrane proteins. Overexpression impairs internalization of SLC2A1/GLUT1 and TRPV4 and increases the levels of SLC2A1/GLUT1 and TRPV4 at the cell membrane. Inhibits the TRPV4 calcium channel activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9Q135", "ec_number_list": "", "go_molecular_function": "GO:0005543 phospholipid binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005886 plasma membrane", "go_biological_process": "GO:0030100 regulation of endocytosis;GO:0007010 cytoskeleton organization;GO:0097320 plasma membrane tubulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R2D9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R2E5-1", "uniprot_id": "F1R2E5_DANRE", "mass": 100449.0, "length": 882, "protein_name": "Oxysterol-binding protein", "gene_name": "osbpl3b", "organism": "Zebrafish", "refseq_name": "oxysterol-binding protein-related protein 3 isoform X1", "refseq_ac": "XP_696327", "gene_names_uniprotkb": "osbpl3b", "gene_names_refseq": "osbpl3b", "protein_names_uniprotkb": "Oxysterol-binding protein", "protein_names_refseq": "oxysterol-binding protein-related protein 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567921); (R-DRE-192105)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_696327.4. COMPLETENESS: full length., [RefSeq]; Lipid transfer protein that mediates the non-vesicular transport of phosphoinositide 4-phosphate (1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol 4-phosphate), or PI(4)P) at the plasma membrane (PM)/ endoplasmic reticulum (ER) contact sites. Extracts PI4P from the PM, in exchange for phosphatidylcholine. Can bind to the ER membrane protein VAPA and recruit VAPA to PM sites, thus linking these intracellular compartments. The ORP3-VAPA complex stimulates RRAS signaling which in turn attenuates integrin beta-1 (ITGB1) activation at the cell surface. With VAPA, may regulate ER morphology. Has a role in regulation of the actin cytoskeleton, cell polarity and cell adhesion. Binds to phosphoinositides with preference for PI(3,4)P2 and PI(3,4,5)P3. Also binds 25-hydroxycholesterol and cholesterol., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UTD4;A0AC58HI10", "ec_number_list": "", "go_molecular_function": "GO:0015485 cholesterol binding;GO:0120015 sterol transfer activity;GO:0008289 lipid binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0031965 nuclear membrane;GO:0097038 perinuclear endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006699 bile acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R2E5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R2G7-1", "uniprot_id": "F1R2G7_DANRE", "mass": 36740.0, "length": 328, "protein_name": "Lymphatic vessel endothelial hyaluronic acid receptor 1a precursor", "gene_name": "lyve1a", "organism": "Zebrafish", "refseq_name": "lymphatic vessel endothelial hyaluronic acid receptor 1a precursor", "refseq_ac": "NP_001296404", "gene_names_uniprotkb": "lyve1a; hm:zeh0104; si:dkeyp-104h2.3; zeh0104", "gene_names_refseq": "hm:zeh0104; lyve1a; si:dkeyp-104h2.3; zeh0104", "protein_names_uniprotkb": "Lymphatic vessel endothelial hyaluronic acid receptor 1a precursor", "protein_names_refseq": "lymphatic vessel endothelial hyaluronan receptor 1; lymphatic vessel endothelial hyaluronic acid receptor 1a precursor; lymphatic vessel endothelial hyaluronic acid receptor 1a; zmp:0000000782", "tax_id": 7955, "disease": "", "pathway": " (dre:560618); (R-DRE-2142845); (R-DRE-2160916)", "pathway_count": 3, "publication_count": 3, "publication_id_list": "26469318;28071661;35314737", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH432880.1, GFIL01023290.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH432880.1 and JBMGRA010000007.1. On Jun 5, 2015 this sequence version replaced XP_689109.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P6N1", "ec_number_list": "", "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0005540 hyaluronic acid binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R2G7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R2K7-1", "uniprot_id": "F1R2K7_DANRE", "mass": 73726.0, "length": 655, "protein_name": "RNA polymerase II elongation factor ELL2", "gene_name": "ell2", "organism": "Zebrafish", "refseq_name": "RNA polymerase II elongation factor ELL2", "refseq_ac": "NP_001077281", "gene_names_uniprotkb": "ell2; cb244; fb78f03; im:3814960; sb:cb244; wu:fb78f03", "gene_names_refseq": "cb244; ell2; fb78f03; im:3814960; sb:cb244; wu:fb78f03", "protein_names_uniprotkb": "RNA polymerase II elongation factor ELL2", "protein_names_refseq": "RNA polymerase II elongation factor ELL2; elongation factor, RNA polymerase II 2", "tax_id": 7955, "disease": "", "pathway": " (dre:322997); (R-DRE-6807505)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "15520368;16109975;18565225;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01004757.1, GFIL01009555.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BM096368.1, BC085600.1, CT677237.2, BI673398.1 and JBMGRA010000021.1. On Aug 14, 2009 this sequence version replaced NP_001077281.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDW7", "ec_number_list": "", "go_molecular_function": "GO:0003746 translation elongation factor activity;GO:0000987 cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0008023 transcription elongation factor complex", "go_biological_process": "GO:0006368 transcription elongation by RNA polymerase II;GO:0032968 positive regulation of transcription elongation by RNA polymerase II;GO:0042795 snRNA transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R2K7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R2S9-1", "uniprot_id": "F1R2S9_DANRE", "mass": 83285.0, "length": 731, "protein_name": "Extracellular matrix protein 2", "gene_name": "ecm2", "organism": "Zebrafish", "refseq_name": "extracellular matrix protein 2", "refseq_ac": "XP_686507", "gene_names_uniprotkb": "ecm2", "gene_names_refseq": "ecm2", "protein_names_uniprotkb": "Extracellular matrix protein 2", "protein_names_refseq": "extracellular matrix protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:558224)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_686507.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UV16", "ec_number_list": "", "go_molecular_function": "GO:0008201 heparin binding;GO:0070052 collagen V binding", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0030198 extracellular matrix organization;GO:0010811 positive regulation of cell-substrate adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R2S9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R2T1-1", "uniprot_id": "F1R2T1_DANRE", "mass": 32677.0, "length": 295, "protein_name": "Cdc42 effector protein 5", "gene_name": "cdc42ep5", "organism": "Zebrafish", "refseq_name": "cdc42 effector protein 5", "refseq_ac": "NP_001039311", "gene_names_uniprotkb": "cdc42ep5; wu:fi19g04; zgc:153966", "gene_names_refseq": "cdc42ep5; wu:fi19g04; zgc:153966", "protein_names_uniprotkb": "Cdc42 effector protein 5", "protein_names_refseq": "cdc42 effector protein 5", "tax_id": 7955, "disease": "", "pathway": " (dre:558275); (R-DRE-5687128); (R-DRE-9013148)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "16109975", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122441.1, GDQH01004719.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476762, SAMEA4476773 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jun 25, 2025 this sequence version replaced NP_001039311.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9N1", "ec_number_list": "", "go_molecular_function": "GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0007266 Rho protein signal transduction;GO:0008360 regulation of cell shape;GO:0031274 positive regulation of pseudopodium assembly;GO:0030838 positive regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1R2T1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R2V2-1", "uniprot_id": "F1R2V2_DANRE", "mass": 55850.0, "length": 489, "protein_name": "Angiopoietin-related protein 6 isoform X1", "gene_name": "angptl6", "organism": "Zebrafish", "refseq_name": "angiopoietin-related protein 6 isoform X1", "refseq_ac": "XP_009298069", "gene_names_uniprotkb": "angptl6; cb242; sb:cb242", "gene_names_refseq": "angptl6; cb242; sb:cb242", "protein_names_uniprotkb": "Angiopoietin-related protein 6 isoform X1", "protein_names_refseq": "angiopoietin-related protein 6 isoform X1", "tax_id": 7955, "disease": "gestational diabetes (Disease Ontology:DOID:11714); obesity (Disease Ontology:DOID:9970)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B1B3", "ec_number_list": "", "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R2V2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R2Z9-1", "uniprot_id": "F1R2Z9_DANRE", "mass": 90471.0, "length": 804, "protein_name": "Spondin-1", "gene_name": "spon1b", "organism": "Zebrafish", "refseq_name": "spondin-1b isoform X1", "refseq_ac": "XP_005174403", "gene_names_uniprotkb": "spon1b; F-spondin2; cb1051", "gene_names_refseq": "F-spondin2; cb1051; spon1b", "protein_names_uniprotkb": "Spondin-1; F-spondin", "protein_names_refseq": "spondin-1b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BLK8", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0031012 extracellular matrix", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R2Z9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R300-1", "uniprot_id": "F1R300_DANRE", "mass": 31039.0, "length": 277, "protein_name": "U2 small nuclear ribonucleoprotein A'", "gene_name": "snrpa1", "organism": "Zebrafish", "refseq_name": "U2 small nuclear ribonucleoprotein A'", "refseq_ac": "NP_001007384", "gene_names_uniprotkb": "snrpa1; im:7142962; zgc:101832", "gene_names_refseq": "im:7142962; snrpa1; zgc:101832", "protein_names_uniprotkb": "U2 small nuclear ribonucleoprotein A'", "protein_names_refseq": "U2 small nuclear ribonucleoprotein A'", "tax_id": 7955, "disease": "connective tissue disease (Disease Ontology:DOID:65)", "pathway": " (dre:492511); (R-DRE-72163); (R-DRE-9770562); (R-DRE-9943411)", "pathway_count": 4, "publication_count": 5, "publication_id_list": "19478994;26469318;27189481;27829120;31053140", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH459369.1, GDQQ01004440.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1, EH548169.1 and EH529176.1. On Jul 30, 2011 this sequence version replaced NP_001007384.1., [RefSeq]; Involved in pre-mRNA splicing as component of the spliceosome. Associated with sn-RNP U2, where it contributes to the binding of stem loop IV of U2 snRNA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N398", "ec_number_list": "", "go_molecular_function": "GO:0030620 U2 snRNA binding", "go_cellular_component": "GO:0005681 spliceosomal complex;GO:0005686 U2 snRNP", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R300-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R343-1", "uniprot_id": "F1R343_DANRE", "mass": 69175.0, "length": 617, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "nuak1a", "organism": "Zebrafish", "refseq_name": "NUAK family SNF1-like kinase 1", "refseq_ac": "XP_690066", "gene_names_uniprotkb": "nuak1a", "gene_names_refseq": "nuak1a", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "NUAK family SNF1-like kinase 1", "tax_id": 7955, "disease": "uterine fibroid (Disease Ontology:DOID:13223)", "pathway": " (dre:561563)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T734", "ec_number_list": "2.7.11.1;2.7.11.13;2.7.11.25;2.7.10.1;2.7.11.22;2.7.11.21;2.7.11.17;2.7.12.1;2.7.12.2;2.7.11.24;2.7.10.2;2.7.11.23;2.7.1.150;2.7.11.12;2.7.11.39;2.7.11.11;2.7.1.153;2.7.1.137;2.7.1.154;2.7.11.26;2.7.11.31", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R343-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R355-1", "uniprot_id": "F1R355_DANRE", "mass": 44724.0, "length": 399, "protein_name": "1.17.99.9; Heme A synthase COX15", "gene_name": "cox15", "organism": "Zebrafish", "refseq_name": "heme A synthase COX15", "refseq_ac": "NP_957500", "gene_names_uniprotkb": "cox15; wu:fa18g06; zgc:56240; zgc:77422", "gene_names_refseq": "cox15; wu:fa18g06; zgc:56240; zgc:77422", "protein_names_uniprotkb": "1.17.99.9; Heme A synthase COX15", "protein_names_refseq": "COX15 homolog, cytochrome c oxidase assembly protein; cytochrome c oxidase assembly homolog 15; heme A synthase COX15", "tax_id": 7955, "disease": "mitochondrial complex IV deficiency nuclear type 6 (Disease Ontology:DOID:0080358); hypertrophic cardiomyopathy (Disease Ontology:DOID:11984); Leigh disease (Disease Ontology:DOID:3652)", "pathway": " (dre:394181); (R-DRE-189451); (R-DRE-9864848)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "16109975;28252024;29896183;30082823;36208295", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066452.1, BC046017.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH439430.1 and FP111012.1. On Mar 1, 2014 this sequence version replaced NP_957500.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PE82", "ec_number_list": "1.17.99.9;7.1.1.9", "go_molecular_function": "GO:0046872 metal ion binding;GO:0120547 heme A synthase activity", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0006784 heme A biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R355-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R372-1", "uniprot_id": "F1R372_DANRE", "mass": 171942.0, "length": 1502, "protein_name": "Rho GTPase-activating protein 5", "gene_name": "arhgap5", "organism": "Zebrafish", "refseq_name": "rho GTPase-activating protein 5", "refseq_ac": "XP_001336016", "gene_names_uniprotkb": "arhgap5", "gene_names_refseq": "arhgap5", "protein_names_uniprotkb": "Rho GTPase-activating protein 5", "protein_names_refseq": "rho GTPase-activating protein 5", "tax_id": 7955, "disease": "", "pathway": " (dre:795752); (R-DRE-8980692); (R-DRE-9013026); (R-DRE-9013106); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013406); (R-DRE-9013408); (R-DRE-9013409); (R-DRE-9013423); (R-DRE-9035034); (R-DRE-9696264); (R-DRE-9696270); (R-DRE-9696273)", "pathway_count": 14, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PZ06;X1WBR2", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005096 GTPase activator activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0007266 Rho protein signal transduction;GO:0008361 regulation of cell size", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R372-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R385-1", "uniprot_id": "F1R385_DANRE", "mass": 30326.0, "length": 273, "protein_name": "Armadillo repeat-containing protein 1", "gene_name": "armc1l", "organism": "Zebrafish", "refseq_name": "armadillo repeat containing 1, like", "refseq_ac": "NP_955833", "gene_names_uniprotkb": "armc1l; cb398; sb:cb398; zgc:56200", "gene_names_refseq": "armc1l; cb398; sb:cb398; zgc:56200", "protein_names_uniprotkb": "Armadillo repeat-containing protein 1", "protein_names_refseq": "armadillo repeat containing 1, like", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "25326603;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH546723.1, BC045988.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1, EH546723.1, EH462563.1 and EH532470.1. On Sep 1, 2015 this sequence version replaced NP_955833.1., [RefSeq]; In association with mitochondrial contact site and cristae organizing system (MICOS) complex components and mitochondrial outer membrane sorting assembly machinery (SAM) complex components may regulate mitochondrial dynamics playing a role in determining mitochondrial length, distribution and motility., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9L0;A0AC58IIS5;A0AC58IIS8", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005741 mitochondrial outer membrane", "go_biological_process": "GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R385-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R3E6-1", "uniprot_id": "F1R3E6_DANRE", "mass": 65664.0, "length": 626, "protein_name": "Forkhead box protein O4", "gene_name": "foxo4", "organism": "Zebrafish", "refseq_name": "forkhead box protein O4", "refseq_ac": "XP_009289443", "gene_names_uniprotkb": "foxo4", "gene_names_refseq": "foxo4", "protein_names_uniprotkb": "Forkhead box protein O4", "protein_names_refseq": "forkhead box protein O4", "tax_id": 7955, "disease": "gastric ulcer (Disease Ontology:DOID:10808); Parkinson's disease (Disease Ontology:DOID:14330); alcohol-induced mental disorder (Disease Ontology:DOID:251); paraplegia (Disease Ontology:DOID:607)", "pathway": " (dre:563719); (R-DRE-198693); (R-DRE-9614399); (R-DRE-9615017); (R-DRE-9617828)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3APA3", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0001666 response to hypoxia;GO:0032364 intracellular oxygen homeostasis;GO:0001945 lymph vessel development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R3E6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R3F7-1", "uniprot_id": "F1R3F7_DANRE", "mass": 30029.0, "length": 270, "protein_name": "Complement component 1 Q subcomponent-binding protein, mitochondrial", "gene_name": "c1qbp", "organism": "Zebrafish", "refseq_name": "complement component 1 Q subcomponent-binding protein, mitochondrial", "refseq_ac": "NP_001017858", "gene_names_uniprotkb": "c1qbp; fa14h03; sb:cb785; si:ch1073-329n19.2; wu:fa14h03; zgc:110137", "gene_names_refseq": "c1qbp; fa14h03; sb:cb785; si:ch1073-329n19.2; wu:fa14h03; zgc:110137", "protein_names_uniprotkb": "Complement component 1 Q subcomponent-binding protein, mitochondrial", "protein_names_refseq": "complement component 1 Q subcomponent-binding protein, mitochondrial", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 33 (Disease Ontology:DOID:0111495)", "pathway": " (dre:334619); (R-DRE-8980692); (R-DRE-9013106)", "pathway_count": 3, "publication_count": 8, "publication_id_list": "26046835;26469318;26799215;28252024;32094353;33705730;34988408;37014912", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092751.1, EH432860.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505383, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH483432.1, EH440105.1 and EH466913.1. On or before Feb 25, 2011 this sequence version replaced XP_002664863.1, NP_001017858.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5K7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005730 nucleolus;GO:0005759 mitochondrial matrix;GO:0005886 plasma membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006397 mRNA processing;GO:0045087 innate immune response;GO:0006915 apoptotic process;GO:0006974 DNA damage response", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1R3F7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R3G8-1", "uniprot_id": "F1R3G8_DANRE", "mass": 32840.0, "length": 289, "protein_name": "Spermidine synthase", "gene_name": "srm", "organism": "Zebrafish", "refseq_name": "spermidine synthase", "refseq_ac": "NP_957328", "gene_names_uniprotkb": "srm; fa18b03; id:ibd1177; wu:fa18b03; zgc:63600", "gene_names_refseq": "fa18b03; id:ibd1177; srm; wu:fa18b03; zgc:63600", "protein_names_uniprotkb": "Spermidine synthase; 2.5.1.16; Putrescine aminopropyltransferase", "protein_names_refseq": "spermidine synthase", "tax_id": 7955, "disease": "", "pathway": " (dre:394009); (R-DRE-351202)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "26469318;26884397;27215328;33901178;34903892", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01039674.1, GDQH01001701.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505379 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Jun 26, 2009 this sequence version replaced NP_957328.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM). Has a strong preference for putrescine as substrate, and has very low activity towards 1,3-diaminopropane. Has extremely low activity towards spermidine., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PDY7", "ec_number_list": "2.5.1.16", "go_molecular_function": "GO:0004766 spermidine synthase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0008295 spermidine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R3G8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R3H7-1", "uniprot_id": "F1R3H7_DANRE", "mass": 45604.0, "length": 381, "protein_name": "RIB43A-like with coiled-coils protein 1", "gene_name": "ribc1", "organism": "Zebrafish", "refseq_name": "RIB43A-like with coiled-coils protein 1", "refseq_ac": "NP_001074132", "gene_names_uniprotkb": "ribc1; sb:eu690; si:dkey-23g9.1; zgc:158280", "gene_names_refseq": "ribc1; sb:eu690; si:dkey-23g9.1; zgc:158280", "protein_names_uniprotkb": "RIB43A-like with coiled-coils protein 1", "protein_names_refseq": "RIB43A-like with coiled-coils protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:791181)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "24248357;26469318;27215328;34903892;36533556", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC129188.1, GFIL01032668.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505382 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Jun 25, 2025 this sequence version replaced NP_001074132.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1ND12", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R3H7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R3M6-1", "uniprot_id": "F1R3M6_DANRE", "mass": 27392.0, "length": 240, "protein_name": "Homeobox protein Nkx-3.2", "gene_name": "nkx3.3", "organism": "Zebrafish", "refseq_name": "NK3 homeobox 3", "refseq_ac": "NP_001013342", "gene_names_uniprotkb": "nkx3.3; zgc:113257", "gene_names_refseq": "nkx3.3; zgc:113257", "protein_names_uniprotkb": "Homeobox protein Nkx-3.2; Bagpipe homeobox protein homolog 1", "protein_names_refseq": "NK3 homeobox 3", "tax_id": 7955, "disease": "", "pathway": " (dre:503746)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "20112453;30252882;31597731", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC090785.1, GDQQ01041119.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476737 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On or before May 27, 2016 this sequence version replaced XP_009305804.1, NP_001013342.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N4J4", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0001501 skeletal system development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R3M6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R3R6-1", "uniprot_id": "F1R3R6_DANRE", "mass": 90047.0, "length": 822, "protein_name": "PR domain zinc finger protein 4", "gene_name": "prdm4", "organism": "Zebrafish", "refseq_name": "PR domain zinc finger protein 4", "refseq_ac": "NP_001116215", "gene_names_uniprotkb": "prdm4; si:dkey-180p18.8", "gene_names_refseq": "prdm4; si:dkey-180p18.8", "protein_names_uniprotkb": "PR domain zinc finger protein 4", "protein_names_refseq": "PR domain zinc finger protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100000537)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "18231586;24240475;26469318;27189481;30458291", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01021686.1, GFIL01031334.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000004.1. On Mar 18, 2008 this sequence version replaced XP_001340718.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI59", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:1990226 histone methyltransferase binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006366 transcription by RNA polymerase II;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R3R6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R3Y3-1", "uniprot_id": "F1R3Y3_DANRE", "mass": 36256.0, "length": 322, "protein_name": "Golgi to ER traffic protein 4 homolog", "gene_name": "get4", "organism": "Zebrafish", "refseq_name": "Golgi to ER traffic protein 4 homolog", "refseq_ac": "NP_001186836", "gene_names_uniprotkb": "get4; cee; fd15h01; wu:fd15h01", "gene_names_refseq": "cee; fd15h01; get4; wu:fd15h01", "protein_names_uniprotkb": "Golgi to ER traffic protein 4 homolog; Conserved edge expressed protein", "protein_names_refseq": "Golgi to ER traffic protein 4 homolog; conserved edge expressed protein", "tax_id": 7955, "disease": "congenital disorder of glycosylation type IIy (Disease Ontology:DOID:0051052)", "pathway": " (dre:796309)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "18249086;26469318;34887561", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049494.1, GFIL01011315.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505381, SAMEA3505382 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NXG1", "ec_number_list": "", "go_molecular_function": "GO:0140597 protein carrier chaperone", "go_cellular_component": "GO:0005829 cytosol;GO:0071818 BAT3 complex", "go_biological_process": "GO:0045048 protein insertion into ER membrane", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R3Y3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R474-1", "uniprot_id": "F1R474_DANRE", "mass": 35737.0, "length": 327, "protein_name": "DNA repair protein", "gene_name": "rad51d", "organism": "Zebrafish", "refseq_name": "DNA repair protein RAD51 homolog 4", "refseq_ac": "NP_996959", "gene_names_uniprotkb": "rad51d; zgc:77165", "gene_names_refseq": "rad51d; zgc:77165", "protein_names_uniprotkb": "DNA repair protein", "protein_names_refseq": "DNA repair protein RAD51 homolog 4; RAD51 homolog D", "tax_id": 7955, "disease": "hereditary breast ovarian cancer syndrome (Disease Ontology:DOID:5683)", "pathway": " (dre:404608); (R-DRE-5685942); (R-DRE-5693537); (R-DRE-5693568); (R-DRE-5693579); (R-DRE-5693616)", "pathway_count": 6, "publication_count": 3, "publication_id_list": "26469318;28531178;32196499", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588735.1393694.1, SRR32588722.17578858.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Feb 28, 2016 this sequence version replaced NP_996959.1., [RefSeq]; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents. Bind to single-stranded DNA (ssDNA) and has DNA-dependent ATPase activity. Part of the RAD51 paralog protein complex BCDX2 which acts in the BRCA1-BRCA2-dependent HR pathway. Upon DNA damage, BCDX2 acts downstream of BRCA2 recruitment and upstream of RAD51 recruitment. BCDX2 binds predominantly to the intersection of the four duplex arms of the Holliday junction and to junction of replication forks. The BCDX2 complex was originally reported to bind single-stranded DNA, single-stranded gaps in duplex DNA and specifically to nicks in duplex DNA. Involved in telomere maintenance. The BCDX2 subcomplex XRCC2:RAD51D can stimulate Holliday junction resolution by BLM., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1Z3M3", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0003697 single-stranded DNA binding;GO:0008094 ATP-dependent activity, acting on DNA;GO:0140664 ATP-dependent DNA damage sensor activity", "go_cellular_component": "GO:0005815 microtubule organizing center;GO:0005657 replication fork;GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex;GO:0000781 chromosome, telomeric region", "go_biological_process": "GO:0000723 telomere maintenance;GO:0000724 double-strand break repair via homologous recombination;GO:0007131 reciprocal meiotic recombination;GO:0042148 DNA strand invasion", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R474-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R480-1", "uniprot_id": "F1R480_DANRE", "mass": 124215.0, "length": 1157, "protein_name": "Desmoglein-2.1-like isoform X1", "gene_name": "si:ch73-74h11.1", "organism": "Zebrafish", "refseq_name": "desmoglein-2.1-like isoform X1", "refseq_ac": "XP_017208205", "gene_names_uniprotkb": "si:ch73-74h11.1", "gene_names_refseq": "si:ch73-74h11.1", "protein_names_uniprotkb": "Desmoglein-2.1-like isoform X1", "protein_names_refseq": "desmoglein-2.1-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100534918); (R-DRE-351906); (R-DRE-6798695); (R-DRE-6805567); (R-DRE-6809371); (R-DRE-9696264); (R-DRE-9696270)", "pathway_count": 7, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_017208205.1. COMPLETENESS: full length., [RefSeq]; A component of desmosome cell-cell junctions which are required for positive regulation of cellular adhesion. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YUE0", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030057 desmosome", "go_biological_process": "GO:0098609 cell-cell adhesion;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0002009 morphogenesis of an epithelium;GO:0045216 cell-cell junction organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R480-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R498-1", "uniprot_id": "F1R498_DANRE", "mass": 68211.0, "length": 595, "protein_name": "RNA polymerase II-associated protein 3", "gene_name": "rpap3", "organism": "Zebrafish", "refseq_name": "RNA polymerase II-associated protein 3", "refseq_ac": "NP_956498", "gene_names_uniprotkb": "rpap3; zgc:56178", "gene_names_refseq": "rpap3; zgc:56178", "protein_names_uniprotkb": "RNA polymerase II-associated protein 3", "protein_names_refseq": "RNA polymerase II-associated protein 3", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 3, "publication_id_list": "22761277;26469318;31299224", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.21749375.1, SRR32588717.1578170.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Jul 17, 2010 this sequence version replaced NP_956498.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAY5;A0AC58J5S5;A0AC58J5T3;A0AC58J5T4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R498-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R4A4-1", "uniprot_id": "F1R4A4_DANRE", "mass": 13666.0, "length": 124, "protein_name": "Histone H2B", "gene_name": "si:ch1073-159d7.2; si:ch211-113a14.15", "organism": "Zebrafish", "refseq_name": "histone H2B 1/2-like", "refseq_ac": "XP_068073670", "gene_names_uniprotkb": "si:ch1073-159d7.2; si:ch211-113a14.15; LOC137489377; LOC137489379; si:ch211-113a14.17", "gene_names_refseq": "LOC137489377", "protein_names_uniprotkb": "Histone H2B", "protein_names_refseq": "histone H2B 1/2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:137489377); (dre:560238)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YYG2;E7F2U8", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0046982 protein heterodimerization activity;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005634 nucleus;GO:0000786 nucleosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R4A4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R4D3-1", "uniprot_id": "F1R4D3_DANRE", "mass": 61714.0, "length": 542, "protein_name": "Leucine-rich repeat transmembrane neuronal protein 2 precursor", "gene_name": "lrrtm2", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat transmembrane neuronal protein 2 precursor", "refseq_ac": "NP_001338621", "gene_names_uniprotkb": "lrrtm2; sc:d0320", "gene_names_refseq": "lrrtm2; sc:d0320", "protein_names_uniprotkb": "Leucine-rich repeat transmembrane neuronal protein 2 precursor", "protein_names_refseq": "leucine-rich repeat transmembrane neuronal protein 2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100538061)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "19765300;20802085;20935258;26492970;27189481;31511515", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01020295.1, GDQQ01036237.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476789, SAMEA4476798 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1 and EH445017.1. On Aug 27, 2018 this sequence version replaced XP_009295864.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3APE2", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045211 postsynaptic membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1R4D3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R4T3-1", "uniprot_id": "F1R4T3_DANRE", "mass": 126228.0, "length": 1142, "protein_name": "Zinc finger protein ZFPM2a isoform X1", "gene_name": "zfpm2a", "organism": "Zebrafish", "refseq_name": "zinc finger protein ZFPM2a isoform X1", "refseq_ac": "XP_009290873", "gene_names_uniprotkb": "zfpm2a; FOG-A; fog2a; zgc:152696", "gene_names_refseq": "FOG-A; fog2a; zfpm2a; zgc:152696", "protein_names_uniprotkb": "Zinc finger protein ZFPM2a isoform X1", "protein_names_refseq": "zinc finger protein ZFPM2a isoform X1", "tax_id": 7955, "disease": "myelodysplastic syndrome (Disease Ontology:DOID:0050908); tricuspid atresia (Disease Ontology:DOID:0080169); 46,XY sex reversal 9 (Disease Ontology:DOID:0111770); congenital diaphragmatic hernia (Disease Ontology:DOID:3827); tetralogy of Fallot (Disease Ontology:DOID:6419)", "pathway": " (R-DRE-983231)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AIG1", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003714 transcription corepressor activity;GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0007507 heart development;GO:0030154 cell differentiation;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R4T3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R4X0-1", "uniprot_id": "F1R4X0_DANRE", "mass": 22472.0, "length": 210, "protein_name": "INO80 complex subunit C", "gene_name": "ino80c", "organism": "Zebrafish", "refseq_name": "INO80 complex subunit C", "refseq_ac": "NP_001002108", "gene_names_uniprotkb": "ino80c; fj61b08; wu:fj61b08; zgc:86850", "gene_names_refseq": "fj61b08; ino80c; wu:fj61b08; zgc:86850", "protein_names_uniprotkb": "INO80 complex subunit C", "protein_names_refseq": "INO80 complex subunit C", "tax_id": 7955, "disease": "", "pathway": " (dre:791987); (R-DRE-5689603); (R-DRE-5696394)", "pathway_count": 3, "publication_count": 3, "publication_id_list": "26469318;32196499;32779569", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH449710.1, EH441665.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505391, SAMEA4476729 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH554982.1 and EH565174.1. On or before Mar 27, 2009 this sequence version replaced XP_001330869.1, NP_001002108.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1MZU6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0031011 Ino80 complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R4X0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R519-1", "uniprot_id": "F1R519_DANRE", "mass": 35361.0, "length": 305, "protein_name": "Free fatty acid receptor 3", "gene_name": "si:ch211-231m23.4", "organism": "Zebrafish", "refseq_name": "free fatty acid receptor 3", "refseq_ac": "XP_017207055", "gene_names_uniprotkb": "si:ch211-231m23.4", "gene_names_refseq": "si:ch211-231m23.4", "protein_names_uniprotkb": "Free fatty acid receptor 3", "protein_names_refseq": "free fatty acid receptor 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100333904); (R-DRE-416476); (R-DRE-444209)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YSZ6;A0AC58HLM0;A0AC58HLP8", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0071398 cellular response to fatty acid", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R519-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R543-1", "uniprot_id": "F1R543_DANRE", "mass": 123088.0, "length": 1201, "protein_name": "Nuclear envelope pore membrane protein POM 121", "gene_name": "pom121", "organism": "Zebrafish", "refseq_name": "nuclear envelope pore membrane protein POM 121", "refseq_ac": "NP_001353337", "gene_names_uniprotkb": "pom121; wu:fa16c07; wu:fb30f12; wu:fl35g12", "gene_names_refseq": "fb30f12; pom121; wu:fa16c07; wu:fb30f12; wu:fl35g12", "protein_names_uniprotkb": "Nuclear envelope pore membrane protein POM 121", "protein_names_refseq": "POM121 membrane glycoprotein; nuclear envelope pore membrane protein POM 121", "tax_id": 7955, "disease": "", "pathway": " (dre:568298)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11116086;26469318;27189481;28586646;36493774", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001677.1, SRR32588715.975157.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Oct 4, 2018 this sequence version replaced XP_696713.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UTE0", "ec_number_list": "", "go_molecular_function": "GO:0017056 structural constituent of nuclear pore;GO:0008139 nuclear localization sequence binding", "go_cellular_component": "GO:0005643 nuclear pore", "go_biological_process": "GO:0006405 RNA export from nucleus;GO:0006606 protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R543-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R5E0-1", "uniprot_id": "F1R5E0_DANRE", "mass": 80911.0, "length": 715, "protein_name": "Choline transporter-like protein", "gene_name": "slc44a5a", "organism": "Zebrafish", "refseq_name": "choline transporter-like protein 5-A", "refseq_ac": "NP_001410720", "gene_names_uniprotkb": "slc44a5a; ctl5a; si:dkey-189n19.2; slc44a5", "gene_names_refseq": "ctl5a; si:dkey-189n19.2; slc44a5a; slc44a5", "protein_names_uniprotkb": "Choline transporter-like protein", "protein_names_refseq": "choline transporter-like protein 5-A; solute carrier family 44 member 5-A", "tax_id": 7955, "disease": "", "pathway": " (dre:568158)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;28013291", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588732.14627366.1, SRR32588722.8631984.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Aug 15, 2023 this sequence version replaced XP_696562.6., [RefSeq]; Choline transporter., [UniProtKB, UniProtKB]; Choline/H+ antiporter., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TFI9", "ec_number_list": "", "go_molecular_function": "GO:0015297 antiporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R5E0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R5J2-1", "uniprot_id": "F1R5J2_DANRE", "mass": 23676.0, "length": 220, "protein_name": "Claudin", "gene_name": "cldn5b", "organism": "Zebrafish", "refseq_name": "claudin-5b", "refseq_ac": "NP_001006044", "gene_names_uniprotkb": "cldn5b; zgc:103419", "gene_names_refseq": "cldn5b; zgc:103419", "protein_names_uniprotkb": "Claudin", "protein_names_refseq": "claudin-5b", "tax_id": 7955, "disease": "schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:450023)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "20080584;20653957;22438865;23726886;24306108;35917935;36477332;37024546;37437574;37794116", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC083368.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC083368.1. On Sep 30, 2011 this sequence version replaced NP_001006044.1. Sequence Note: This RefSeq record was created from a transcript of a different strain than the reference genome strain because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Claudins function as major constituents of the tight junction complexes that regulate the permeability of epithelia., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N2R7", "ec_number_list": "", "go_molecular_function": "GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005923 bicellular tight junction", "go_biological_process": "GO:0120192 tight junction assembly", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1R5J2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R612-1", "uniprot_id": "F1R612_DANRE", "mass": 47748.0, "length": 431, "protein_name": "3.4.21.21; Coagulation factor VII precursor", "gene_name": "f7l", "organism": "Zebrafish", "refseq_name": "coagulation factor VII precursor", "refseq_ac": "NP_001083027", "gene_names_uniprotkb": "f7l; zgc:163025", "gene_names_refseq": "f7l; zgc:163025", "protein_names_uniprotkb": "3.4.21.21; Coagulation factor VII precursor", "protein_names_refseq": "coagulation factor VII precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100038778)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01034592.1, SRR32588730.6888862.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505379, SAMEA3505384 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On or before Oct 5, 2016 this sequence version replaced XP_009303368.1, NP_001083027.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDA4", "ec_number_list": "", "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0016485 protein processing;GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R612-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R647-1", "uniprot_id": "F1R647_DANRE", "mass": 26249.0, "length": 227, "protein_name": "EF-hand domain-containing protein D1", "gene_name": "efhd1", "organism": "Zebrafish", "refseq_name": "EF-hand domain-containing protein D1", "refseq_ac": "NP_001292523", "gene_names_uniprotkb": "efhd1; fj19b07; si:ch211-281l24.1; wu:fj19b07", "gene_names_refseq": "efhd1; fj19b07; si:ch211-281l24.1; wu:fj19b07", "protein_names_uniprotkb": "EF-hand domain-containing protein D1", "protein_names_refseq": "EF-hand domain-containing protein D1", "tax_id": 7955, "disease": "", "pathway": " (dre:335521)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "17849447;21244694;26469318;27189481;28252024;33164759;33945241", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01009276.1, GDQH01018583.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CN832603.1, EH433935.1, EH457763.1 and JBMGRA010000015.1. On Mar 20, 2015 this sequence version replaced XP_683253.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1U5", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1R647-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R665-1", "uniprot_id": "F1R665_DANRE", "mass": 51442.0, "length": 474, "protein_name": "Caveolae-associated protein 2b", "gene_name": "cavin2b", "organism": "Zebrafish", "refseq_name": "caveolae-associated protein 2b", "refseq_ac": "NP_001004584", "gene_names_uniprotkb": "cavin2b; sdprb; wu:fb39c08; wu:fk90b02; zgc:92231", "gene_names_refseq": "cavin2b; sdprb; wu:fb39c08; wu:fk90b02; zgc:92231", "protein_names_uniprotkb": "Caveolae-associated protein 2b", "protein_names_refseq": "caveolae-associated protein 2b; serum deprivation response b", "tax_id": 7955, "disease": "", "pathway": " (dre:447845)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "23559552;24211655;26323694;26469318;30021837;32031521;34633413", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081627.1, GW709326.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476732, SAMEA4476735 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081627.1. On Sep 30, 2011 this sequence version replaced NP_001004584.1. Sequence Note: This RefSeq record was created from a transcript of a different strain than the reference genome strain because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N248", "ec_number_list": "", "go_molecular_function": "GO:0005080 protein kinase C binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005901 caveola", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1R665-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R6C7-1", "uniprot_id": "F1R6C7_DANRE", "mass": 222201.0, "length": 1933, "protein_name": "Myosin heavy chain, fast skeletal muscle", "gene_name": "myha", "organism": "Zebrafish", "refseq_name": "myosin heavy chain, fast skeletal muscle", "refseq_ac": "XP_021332193", "gene_names_uniprotkb": "myha", "gene_names_refseq": "myha", "protein_names_uniprotkb": "Myosin heavy chain, fast skeletal muscle", "protein_names_refseq": "myosin heavy chain, fast skeletal muscle", "tax_id": 7955, "disease": "", "pathway": " (dre:100149148)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PYR6", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0032982 myosin filament;GO:0030016 myofibril;GO:0016460 myosin II complex", "go_biological_process": "GO:0048731 system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R6C7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R6I1-1", "uniprot_id": "F1R6I1_DANRE", "mass": 20331.0, "length": 173, "protein_name": "Cytochrome c oxidase subunit 4", "gene_name": "cox4i1l", "organism": "Zebrafish", "refseq_name": "cytochrome c oxidase subunit 4I1-like", "refseq_ac": "NP_001373397", "gene_names_uniprotkb": "cox4i1l", "gene_names_refseq": "cox4i1l", "protein_names_uniprotkb": "Cytochrome c oxidase subunit 4", "protein_names_refseq": "cu855779.1; cytochrome c oxidase subunit 4I1-like", "tax_id": 7955, "disease": "cytochrome-c oxidase deficiency disease (Disease Ontology:DOID:3762)", "pathway": " (dre:402880)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "23716667;26854857;27989471;28138518;28252024;29883909;31078959;31117014;37746814", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CO933709.1, EH529663.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505381 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Aug 24, 2020 this sequence version replaced XP_001333987.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q1A3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0045277 respiratory chain complex IV", "go_biological_process": "GO:0006123 mitochondrial electron transport, cytochrome c to oxygen", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F1R6I1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R785-1", "uniprot_id": "F1R785_DANRE", "mass": 73496.0, "length": 646, "protein_name": "Interferon-induced GTP-binding protein Mx", "gene_name": "mxf", "organism": "Zebrafish", "refseq_name": "interferon-induced GTP-binding protein Mx", "refseq_ac": "XP_017206546", "gene_names_uniprotkb": "mxf", "gene_names_refseq": "mxf", "protein_names_uniprotkb": "Interferon-induced GTP-binding protein Mx", "protein_names_refseq": "interferon-induced GTP-binding protein Mx", "tax_id": 7955, "disease": "", "pathway": " (dre:561067)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_017206546.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YT47;A0AC58HEM7;A0AC58HEN2", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008017 microtubule binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0051607 defense response to virus;GO:0016185 synaptic vesicle budding from presynaptic endocytic zone membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R785-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R788-1", "uniprot_id": "F1R788_DANRE", "mass": 50445.0, "length": 440, "protein_name": "Vasoactive intestinal polypeptide receptor isoform X1", "gene_name": "vipr1a", "organism": "Zebrafish", "refseq_name": "vasoactive intestinal polypeptide receptor isoform X1", "refseq_ac": "XP_002660843", "gene_names_uniprotkb": "vipr1a", "gene_names_refseq": "vipr1a", "protein_names_uniprotkb": "Vasoactive intestinal polypeptide receptor isoform X1", "protein_names_refseq": "vasoactive intestinal polypeptide receptor isoform X1", "tax_id": 7955, "disease": "ulcerative colitis (Disease Ontology:DOID:8577); Crohn's disease (Disease Ontology:DOID:8778); achalasia (Disease Ontology:DOID:9164)", "pathway": " (dre:100334247)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002660843.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RDB6", "ec_number_list": "", "go_molecular_function": "GO:0017046 peptide hormone binding;GO:0008528 G protein-coupled peptide receptor activity;GO:0004999 vasoactive intestinal polypeptide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway;GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R788-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7A2-1", "uniprot_id": "F1R7A2_DANRE", "mass": 95978.0, "length": 841, "protein_name": "Protein Niban 2b", "gene_name": "niban2b", "organism": "Zebrafish", "refseq_name": "protein Niban 2b", "refseq_ac": "NP_001313311", "gene_names_uniprotkb": "niban2b; fam129bb; fi39c12; si:dkey-286j20.1; wu:fi39c12; wu:fi40e07", "gene_names_refseq": "fam129bb; fi39c12; niban2b; si:dkey-286j20.1; wu:fi39c12; wu:fi40e07", "protein_names_uniprotkb": "Protein Niban 2b", "protein_names_refseq": "family with sequence similarity 129 member Bb; protein Niban 2b", "tax_id": 7955, "disease": "", "pathway": " (dre:556540)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01010109.1, BC124164.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On May 17, 2016 this sequence version replaced XP_003198673.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2L3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R7A2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7D7-1", "uniprot_id": "F1R7D7_DANRE", "mass": 68479.0, "length": 614, "protein_name": "PR domain zinc finger protein 13", "gene_name": "prdm13", "organism": "Zebrafish", "refseq_name": "PR domain zinc finger protein 13", "refseq_ac": "NP_001313383", "gene_names_uniprotkb": "prdm13", "gene_names_refseq": "prdm13", "protein_names_uniprotkb": "PR domain zinc finger protein 13; PR domain-containing protein 13", "protein_names_refseq": "PR domain zinc finger protein 13", "tax_id": 7955, "disease": "pontocerebellar hypoplasia (Disease Ontology:DOID:0060264)", "pathway": " (dre:796276)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "18231586;24240475;24422634;26469318;27189481;30458291;35390279", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01031321.1, SRR32588723.3134885.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH578754.1 and JBMGRA010000016.1. On May 18, 2016 this sequence version replaced XP_001336591.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2P0", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0008168 methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030902 hindbrain development;GO:0010468 regulation of gene expression;GO:0021702 cerebellar Purkinje cell differentiation;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1R7D7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7L1-1", "uniprot_id": "F1R7L1_DANRE", "mass": 23506.0, "length": 211, "protein_name": "26S proteasome non-ATPase regulatory subunit 9", "gene_name": "psmd9", "organism": "Zebrafish", "refseq_name": "26S proteasome non-ATPase regulatory subunit 9", "refseq_ac": "NP_001002436", "gene_names_uniprotkb": "psmd9; wu:fb30g07; zgc:92643", "gene_names_refseq": "psmd9; wu:fb30g07; zgc:92643", "protein_names_uniprotkb": "26S proteasome non-ATPase regulatory subunit 9; 26S proteasome regulatory subunit p27", "protein_names_refseq": "26S proteasome non-ATPase regulatory subunit 9; proteasome (prosome, macropain) 26S subunit, non-ATPase, 9", "tax_id": 7955, "disease": "", "pathway": " (dre:436709); (R-DRE-9907900)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "11116086;16109975;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC096994.1, GFIL01031645.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1 and BC076129.1. On Oct 21, 2010 this sequence version replaced NP_001002436.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Acts as a chaperone during the assembly of the 26S proteasome, specifically of the base subcomplex of the PA700/19S regulatory complex (RC). During the base subcomplex assembly is part of an intermediate PSMD9:PSMC6:PSMC3 module, also known as modulator trimer complex; PSMD9 is released during the further base assembly process., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0I7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000502 proteasome complex", "go_biological_process": "GO:0070682 proteasome regulatory particle assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1R7L1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7L6-1", "uniprot_id": "F1R7L6_DANRE", "mass": 88894.0, "length": 768, "protein_name": "Hexosyltransferase", "gene_name": "chpfa", "organism": "Zebrafish", "refseq_name": "chondroitin sulfate synthase 2", "refseq_ac": "XP_002663375", "gene_names_uniprotkb": "chpfa", "gene_names_refseq": "chpfa", "protein_names_uniprotkb": "Hexosyltransferase; 2.4.1.-", "protein_names_refseq": "chondroitin sulfate synthase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100331155); (R-DRE-2022870)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002663375.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RR72", "ec_number_list": "2.4.1.-", "go_molecular_function": "GO:0050510 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity;GO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0050650 chondroitin sulfate proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R7L6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7P4-1", "uniprot_id": "F1R7P4_DANRE", "mass": 84822.0, "length": 775, "protein_name": "Phospholipid phosphatase-related protein type 4", "gene_name": "plppr4a", "organism": "Zebrafish", "refseq_name": "phospholipid phosphatase-related protein type 4 isoform X1", "refseq_ac": "XP_005163404", "gene_names_uniprotkb": "plppr4a", "gene_names_refseq": "plppr4a", "protein_names_uniprotkb": "Phospholipid phosphatase-related protein type 4; Brain-specific phosphatidic acid phosphatase-like protein 1; Inactive 2-lysophosphatidate phosphatase PLPPR4; Lipid phosphate phosphatase-related protein type 4; Plasticity-related gene 1 protein", "protein_names_refseq": "phospholipid phosphatase-related protein type 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-419408)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Postsynaptic density membrane protein that indirectly regulates glutamatergic synaptic transmission through lysophosphatidic acid (LPA)-mediated signaling pathways. Binds lysophosphatidic acid (LPA) and mediates its internalization into cells. Could act as receptor or a transporter of this lipid at the post-synaptic membrane. Modulates lysophosphatidic acid (LPA) activity in neuron axonal outgrowth during development by attenuating phospholipid-induced axon collapse., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BAD7;A0AC58HFR1", "ec_number_list": "", "go_molecular_function": "GO:0008195 phosphatidate phosphatase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0098839 postsynaptic density membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0007409 axonogenesis;GO:0006644 phospholipid metabolic process;GO:0046839 phospholipid dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R7P4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R7U0-1", "uniprot_id": "F1R7U0_DANRE", "mass": 30508.0, "length": 273, "protein_name": "DNA damage-regulated autophagy modulator protein 2b isoform X1", "gene_name": "dram2b", "organism": "Zebrafish", "refseq_name": "DNA damage-regulated autophagy modulator protein 2b isoform X1", "refseq_ac": "XP_005168328", "gene_names_uniprotkb": "dram2b; dram2; fj35e01; wu:fj35e01; zgc:86754", "gene_names_refseq": "dram2b; dram2; fj35e01; wu:fj35e01; zgc:86754", "protein_names_uniprotkb": "DNA damage-regulated autophagy modulator protein 2b isoform X1", "protein_names_refseq": "DNA damage-regulated autophagy modulator protein 2b isoform X1", "tax_id": 7955, "disease": "cone-rod dystrophy 21 (Disease Ontology:DOID:0081447)", "pathway": " (dre:415225)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "19389629;25434820;25601102;25630924;26469318;28148780;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BFL3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005764 lysosome;GO:0012505 endomembrane system", "go_biological_process": "GO:0010506 regulation of autophagy;GO:0045494 photoreceptor cell maintenance", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1R7U0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R866-1", "uniprot_id": "F1R866_DANRE", "mass": 78780.0, "length": 696, "protein_name": "DNA-directed RNA polymerase III subunit RPC5 isoform X1", "gene_name": "polr3e", "organism": "Zebrafish", "refseq_name": "DNA-directed RNA polymerase III subunit RPC5 isoform X1", "refseq_ac": "XP_005169485", "gene_names_uniprotkb": "polr3e; Sin; wu:fb12d10; wu:fs42e03; zgc:55592", "gene_names_refseq": "Sin; polr3e; wu:fb12d10; wu:fs42e03; zgc:55592", "protein_names_uniprotkb": "DNA-directed RNA polymerase III subunit RPC5 isoform X1", "protein_names_refseq": "DNA-directed RNA polymerase III subunit RPC5 isoform X1", "tax_id": 7955, "disease": "chromosome 16p12.1 deletion syndrome (Disease Ontology:DOID:0060399)", "pathway": " (dre:336518); (R-DRE-76061); (R-DRE-76066); (R-DRE-76071)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BHA9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005666 RNA polymerase III complex", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R866-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R878-1", "uniprot_id": "F1R878_DANRE", "mass": 29692.0, "length": 267, "protein_name": "Mitochondrial peptide methionine sulfoxide reductase", "gene_name": "msrab", "organism": "Zebrafish", "refseq_name": "mitochondrial peptide methionine sulfoxide reductase isoform X1", "refseq_ac": "XP_009291413", "gene_names_uniprotkb": "msrab", "gene_names_refseq": "msrab", "protein_names_uniprotkb": "Mitochondrial peptide methionine sulfoxide reductase; 1.8.4.11; Peptide-methionine (S)-S-oxide reductase; Protein-methionine-S-oxide reductase", "protein_names_refseq": "mitochondrial peptide methionine sulfoxide reductase isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:503993)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Plays a crucial role in repairing oxidized methionine residues in key lens proteins, such as alpha-crystallin (CRYAA/CRYAB) and cytochrome c (CYCS), thereby restoring their function and maintaining lens transparency., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B2I2", "ec_number_list": "1.8.4.11", "go_molecular_function": "GO:0008113 peptide-methionine (S)-S-oxide reductase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0034599 cellular response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R878-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8C3-1", "uniprot_id": "F1R8C3_DANRE", "mass": 66206.0, "length": 578, "protein_name": "XK-related protein", "gene_name": "xkr6b", "organism": "Zebrafish", "refseq_name": "XK-related protein 6b", "refseq_ac": "NP_001012257", "gene_names_uniprotkb": "xkr6b; si:dkeyp-86f6.2; xkr6", "gene_names_refseq": "si:dkeyp-86f6.2; xkr6b; xkr6", "protein_names_uniprotkb": "XK-related protein", "protein_names_refseq": "XK, Kell blood group complex subunit-related family, member 6; XK-related protein 6b; XK-related protein 6", "tax_id": 7955, "disease": "", "pathway": " (dre:792104)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "20463905;27189481;27220618;28252024;31053140", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01043834.1, SRR32588723.3224657.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476763 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On Jun 20, 2016 this sequence version replaced NP_001012257.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N402", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0043652 engulfment of apoptotic cell;GO:0070782 phosphatidylserine exposure on apoptotic cell surface;GO:1902742 apoptotic process involved in development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R8C3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8D1-1", "uniprot_id": "F1R8D1_DANRE", "mass": 39507.0, "length": 359, "protein_name": "Protein NDRG2", "gene_name": "ndrg1b", "organism": "Zebrafish", "refseq_name": "protein NDRG1b", "refseq_ac": "NP_956986", "gene_names_uniprotkb": "ndrg1b; ndrg1l; zgc:73047", "gene_names_refseq": "ndrg1b; ndrg1l; zgc:73047", "protein_names_uniprotkb": "Protein NDRG2", "protein_names_refseq": "N-myc downstream regulated gene 1, like; N-myc downstream regulated gene 1b; n-myc downstream-regulated gene 1b; protein NDRG1b", "tax_id": 7955, "disease": "Charcot-Marie-Tooth disease type 4D (Disease Ontology:DOID:0110186)", "pathway": " (dre:393665)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16379021;18248185;20980353;21390203;23284293;27870848;32296464;34665878;36214665;37013516", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059429.1, LC102484.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jun 25, 2025 this sequence version replaced NP_956986.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes. May be involved in neuron differentiation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHL0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0007399 nervous system development;GO:0030154 cell differentiation;GO:0045580 regulation of T cell differentiation;GO:0048538 thymus development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1R8D1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8D9-1", "uniprot_id": "F1R8D9_DANRE", "mass": 43469.0, "length": 384, "protein_name": "Protein AAR2 homolog", "gene_name": "aar2", "organism": "Zebrafish", "refseq_name": "protein AAR2 homolog isoform X1", "refseq_ac": "XP_005161981", "gene_names_uniprotkb": "aar2; im:7153138; zgc:92018", "gene_names_refseq": "aar2; im:7153138; zgc:92018", "protein_names_uniprotkb": "Protein AAR2 homolog; AAR2 splicing factor homolog", "protein_names_refseq": "protein AAR2 homolog isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B915", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005681 spliceosomal complex", "go_biological_process": "GO:0000244 spliceosomal tri-snRNP complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R8D9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8F7-1", "uniprot_id": "F1R8F7_DANRE", "mass": 70313.0, "length": 634, "protein_name": "Stonin-1", "gene_name": "gtf2a1l; ston1", "organism": "Zebrafish", "refseq_name": "stonin-1", "refseq_ac": "NP_001314900", "gene_names_uniprotkb": "gtf2a1l; ston1; zgc:154100", "gene_names_refseq": "ston1", "protein_names_uniprotkb": "Stonin-1", "protein_names_refseq": "stonin-1", "tax_id": 7955, "disease": "", "pathway": " (dre:100334703); (R-DRE-8856825)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.1967711.1, SRR26395064.856727.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505381, SAMEA3505384 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1, BQ479673.1 and BM036293.1. On Jun 1, 2016 this sequence version replaced XP_005173076.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3C4", "ec_number_list": "", "go_molecular_function": "GO:0035615 clathrin adaptor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0030122 AP-2 adaptor complex;GO:0008021 synaptic vesicle;GO:0030121 AP-1 adaptor complex;GO:0005737 cytoplasm", "go_biological_process": "GO:0030100 regulation of endocytosis;GO:0072583 clathrin-dependent endocytosis;GO:0048488 synaptic vesicle endocytosis;GO:0006897 endocytosis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1R8F7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8J6-1", "uniprot_id": "F1R8J6_DANRE", "mass": 33920.0, "length": 303, "protein_name": "Palmitoyl-protein thioesterase 1", "gene_name": "ppt1", "organism": "Zebrafish", "refseq_name": "palmitoyl-protein thioesterase 1 isoform X1", "refseq_ac": "XP_005159823", "gene_names_uniprotkb": "ppt1; wu:fj17f04; zgc:63969", "gene_names_refseq": "ppt1; wu:fj17f04; zgc:63969", "protein_names_uniprotkb": "Palmitoyl-protein thioesterase 1; 3.1.2.22; 3.1.2.2; Palmitoyl-protein hydrolase 1", "protein_names_refseq": "palmitoyl-protein thioesterase 1 isoform X1", "tax_id": 7955, "disease": "neuronal ceroid lipofuscinosis 1 (Disease Ontology:DOID:0110721); neuronal ceroid lipofuscinosis 3 (Disease Ontology:DOID:0110731); neuronal ceroid lipofuscinosis (Disease Ontology:DOID:14503); retinal disease (Disease Ontology:DOID:5679)", "pathway": " (R-DRE-75105)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YTV8", "ec_number_list": "3.1.2.22;3.4.19.12;3.1.1.93;3.1.2.2", "go_molecular_function": "GO:0008474 palmitoyl-(protein) hydrolase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005764 lysosome", "go_biological_process": "GO:0006897 endocytosis;GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R8J6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8L1-1", "uniprot_id": "F1R8L1_DANRE", "mass": 24549.0, "length": 215, "protein_name": "Fibroblast growth factor binding protein 2a precursor", "gene_name": "fgfbp2a", "organism": "Zebrafish", "refseq_name": "fibroblast growth factor binding protein 2a precursor", "refseq_ac": "NP_001373240", "gene_names_uniprotkb": "fgfbp2a; fb08g06; fgfbp2; wu:fb08g06", "gene_names_refseq": "fb08g06; fgfbp2a; fgfbp2; wu:fb08g06", "protein_names_uniprotkb": "Fibroblast growth factor binding protein 2a precursor", "protein_names_refseq": "fibroblast growth factor binding protein 2a precursor; fibroblast growth factor binding protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:793049)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "26469318;27566230;28096348;28705894;29551495;34660600;38203224", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH470053.1, EH474184.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Aug 19, 2020 this sequence version replaced XP_001332722.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q161", "ec_number_list": "", "go_molecular_function": "GO:0019838 growth factor binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0007267 cell-cell signaling", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1R8L1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8L4-1", "uniprot_id": "F1R8L4_DANRE", "mass": 37146.0, "length": 318, "protein_name": "Transcription factor IIIA", "gene_name": "gtf3ab", "organism": "Zebrafish", "refseq_name": "general transcription factor IIIA, b", "refseq_ac": "NP_001083013", "gene_names_uniprotkb": "gtf3ab; ns:zf-a141; zgc:162349", "gene_names_refseq": "gtf3ab; ns:zf-a141; zgc:162349", "protein_names_uniprotkb": "Transcription factor IIIA", "protein_names_refseq": "general transcription factor IIIA, b; gtf3a", "tax_id": 7955, "disease": "", "pathway": " (dre:100037394)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16109975;24174574;31999691", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC133956.1, GFIL01012185.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898399, SAMEA898400 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1, EH546778.1 and EH521201.1. On Oct 23, 2010 this sequence version replaced NP_001083013.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NEE9", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042254 ribosome biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R8L4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8M8-1", "uniprot_id": "F1R8M8_DANRE", "mass": 42261.0, "length": 373, "protein_name": "Ribosomal L1 domain-containing protein 1", "gene_name": "rsl1d1", "organism": "Zebrafish", "refseq_name": "ribosomal L1 domain-containing protein 1", "refseq_ac": "NP_001313639", "gene_names_uniprotkb": "rsl1d1; si:dkey-16i5.10", "gene_names_refseq": "rsl1d1; si:dkey-16i5.10", "protein_names_uniprotkb": "Ribosomal L1 domain-containing protein 1", "protein_names_refseq": "ribosomal L1 domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:563247)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "25756310;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC129256.1, GDQH01007576.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Jun 25, 2025 this sequence version replaced NP_001313639.1., [RefSeq]; Regulates cellular senescence through inhibition of PTEN translation. Acts as a pro-apoptotic regulator in response to DNA damage., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P974", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R8M8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8R9-1", "uniprot_id": "F1R8R9_DANRE", "mass": 23726.0, "length": 213, "protein_name": "Ependymin", "gene_name": "epdl2", "organism": "Zebrafish", "refseq_name": "ependymin", "refseq_ac": "XP_685579", "gene_names_uniprotkb": "epdl2", "gene_names_refseq": "epdl2", "protein_names_uniprotkb": "Ependymin", "protein_names_refseq": "ependymin", "tax_id": 7955, "disease": "", "pathway": " (dre:557419)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_685579.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UUQ0", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005764 lysosome", "go_biological_process": "GO:0007160 cell-matrix adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R8R9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8S0-1", "uniprot_id": "F1R8S0_DANRE", "mass": 22976.0, "length": 211, "protein_name": "Dr1-associated corepressor", "gene_name": "drap1", "organism": "Zebrafish", "refseq_name": "dr1-associated corepressor", "refseq_ac": "NP_991104", "gene_names_uniprotkb": "drap1; fb26e10; wu:fb26e10; zgc:56003; zgc:77337", "gene_names_refseq": "drap1; fb26e10; wu:fb26e10; zgc:56003; zgc:77337", "protein_names_uniprotkb": "Dr1-associated corepressor; Dr1-associated protein 1; Negative cofactor 2-alpha", "protein_names_refseq": "dr1-associated corepressor", "tax_id": 7955, "disease": "", "pathway": " (dre:321681)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC067379.1, GFIL01008981.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA4476742 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1 and EH455821.1. On Jun 14, 2014 this sequence version replaced NP_991104.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PEP4", "ec_number_list": "", "go_molecular_function": "GO:0046982 protein heterodimerization activity;GO:0001046 core promoter sequence-specific DNA binding;GO:0016251 RNA polymerase II general transcription initiation factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0017054 negative cofactor 2 complex", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006366 transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R8S0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R8Z0-1", "uniprot_id": "F1R8Z0_DANRE", "mass": 17540.0, "length": 157, "protein_name": "Growth arrest and DNA damage-inducible protein GADD45 alpha", "gene_name": "gadd45aa", "organism": "Zebrafish", "refseq_name": "growth arrest and DNA-damage-inducible, alpha, a", "refseq_ac": "NP_956870", "gene_names_uniprotkb": "gadd45aa; gadd45al; zgc:65993; zgc:77480", "gene_names_refseq": "gadd45aa; gadd45al; zgc:65993; zgc:77480", "protein_names_uniprotkb": "Growth arrest and DNA damage-inducible protein GADD45 alpha", "protein_names_refseq": "gadd45alpha; growth arrest and DNA damage 45 alpha; growth arrest and DNA-damage-inducible, alpha like; growth arrest and DNA-damage-inducible, alpha, a", "tax_id": 7955, "disease": "systemic lupus erythematosus (Disease Ontology:DOID:9074)", "pathway": " (dre:393548); (R-DRE-6804114)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "17369489;19109892;19127516;19439512;19656853;37454282;37633055;37636049;38420496;38731925", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056690.1, EH446990.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH446990.1 and JBMGRA010000002.1. On Apr 9, 2014 this sequence version replaced NP_956870.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PBG0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006974 DNA damage response;GO:0051726 regulation of cell cycle;GO:0048339 paraxial mesoderm development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1R8Z0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R961-1", "uniprot_id": "F1R961_DANRE", "mass": 49278.0, "length": 434, "protein_name": "Acyl-coenzyme A thioesterase 9, mitochondrial isoform X1", "gene_name": "acot9.1", "organism": "Zebrafish", "refseq_name": "acyl-coenzyme A thioesterase 9, mitochondrial isoform X1", "refseq_ac": "XP_005162768", "gene_names_uniprotkb": "acot9.1; acot9; si:rp71-1f1.1; zgc:110305", "gene_names_refseq": "acot9.1; acot9; si:rp71-1f1.1; zgc:110305", "protein_names_uniprotkb": "Acyl-coenzyme A thioesterase 9, mitochondrial isoform X1", "protein_names_refseq": "acyl-coenzyme A thioesterase 9, mitochondrial isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-77289)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9S7", "ec_number_list": "", "go_molecular_function": "GO:0047617 fatty acyl-CoA hydrolase activity;GO:0052689 carboxylic ester hydrolase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006637 acyl-CoA metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R961-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9A7-1", "uniprot_id": "F1R9A7_DANRE", "mass": 51641.0, "length": 466, "protein_name": "ATPase H+ transporting accessory protein 1a precursor", "gene_name": "atp6ap1a", "organism": "Zebrafish", "refseq_name": "ATPase H+ transporting accessory protein 1a precursor", "refseq_ac": "NP_001373449", "gene_names_uniprotkb": "atp6ap1a; si:ch211-117k14.5", "gene_names_refseq": "atp6ap1a; si:ch211-117k14.5", "protein_names_uniprotkb": "ATPase H+ transporting accessory protein 1a precursor", "protein_names_refseq": "ATPase H+ transporting accessory protein 1a precursor; ATPase, H+ transporting, lysosomal accessory protein 1a; ATPase, H+ transporting, lysosomal accessory protein 1", "tax_id": 7955, "disease": "immunodeficiency 47 (Disease Ontology:DOID:0112002)", "pathway": " (dre:100004566); (R-DRE-77387); (R-DRE-8980692); (R-DRE-917977); (R-DRE-983712)", "pathway_count": 5, "publication_count": 5, "publication_id_list": "26254189;26469318;27189481;28252024;37070960", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01001981.1, BC151866.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Aug 29, 2020 this sequence version replaced XP_001339012.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q7E2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0033176 proton-transporting V-type ATPase complex;GO:0012505 endomembrane system;GO:0030659 cytoplasmic vesicle membrane;GO:0098588 bounding membrane of organelle", "go_biological_process": "GO:0030641 regulation of cellular pH", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R9A7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9A9-1", "uniprot_id": "F1R9A9_DANRE", "mass": 43458.0, "length": 384, "protein_name": "Leukocyte elastase inhibitor", "gene_name": "serpinb1l1", "organism": "Zebrafish", "refseq_name": "serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 1", "refseq_ac": "NP_001009892", "gene_names_uniprotkb": "serpinb1l1; serpinb1", "gene_names_refseq": "serpinb1l1; serpinb1", "protein_names_uniprotkb": "Leukocyte elastase inhibitor; Serpin B1; Serpin B6", "protein_names_refseq": "serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 1; serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 1", "tax_id": 7955, "disease": "peeling skin syndrome 5 (Disease Ontology:DOID:0070524); autosomal recessive nonsyndromic deafness 91 (Disease Ontology:DOID:0110536)", "pathway": " (dre:494155)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15520368;16055559;25014315;25692557;26469318;28252024;36772997", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY398415.1, BC162487.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jul 2, 2025 this sequence version replaced NP_001009892.2. Sequence Note:., [RefSeq]; Regulates the activity of the neutrophil proteases., [UniProtKB, UniProtKB]; SERPINB7 mutation causes Nagashima-type palmoplantar keratosis and its spatiotemporal expression in zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BFL4", "ec_number_list": "", "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1R9A9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9C6-1", "uniprot_id": "F1R9C6_DANRE", "mass": 33785.0, "length": 303, "protein_name": "Prohibitin", "gene_name": "phb2b", "organism": "Zebrafish", "refseq_name": "prohibitin-2b", "refseq_ac": "NP_001002681", "gene_names_uniprotkb": "phb2b; zgc:86841", "gene_names_refseq": "phb2b; zgc:86841", "protein_names_uniprotkb": "Prohibitin", "protein_names_refseq": "prohibitin-2b", "tax_id": 7955, "disease": "", "pathway": " (dre:436954); (R-DRE-8949664); (R-DRE-9840373)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075777.1, EH586856.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB786418.1, EH508828.1, EH518571.1 and EH533427.1. On Oct 7, 2011 this sequence version replaced NP_001002681.1., [RefSeq]; Protein with pleiotropic attributes mediated in a cell-compartment- and tissue-specific manner, which include the plasma membrane-associated cell signaling functions, mitochondrial chaperone, and transcriptional co-regulator of transcription factors and sex steroid hormones in the nucleus., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0W4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0007005 mitochondrion organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1R9C6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9F5-1", "uniprot_id": "F1R9F5_DANRE", "mass": 28055.0, "length": 261, "protein_name": "Class E basic helix-loop-helix protein 22", "gene_name": "bhlhe22", "organism": "Zebrafish", "refseq_name": "class E basic helix-loop-helix protein 22", "refseq_ac": "NP_957249", "gene_names_uniprotkb": "bhlhe22; Beta3.1; bhlhb5; wu:fq25e11; zgc:64225", "gene_names_refseq": "Beta3.1; bhlhb5; bhlhe22; wu:fq25e11; zgc:64225", "protein_names_uniprotkb": "Class E basic helix-loop-helix protein 22; Class B basic helix-loop-helix protein 5", "protein_names_refseq": "Beta3a; basic helix-loop-helix domain containing, class B, 5; class E basic helix-loop-helix protein 22", "tax_id": 7955, "disease": "", "pathway": " (dre:393930)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "15533816;19449054;19850031;19876844;21688347;27189481;29107546;29911973;30813944;38017520", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC053312.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC053312.1. On Sep 27, 2011 this sequence version replaced NP_957249.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Atoh1.2 and beta3.1 are transcribed in distinct precursors., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PC14", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0070888 E-box binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0061564 axon development;GO:0007423 sensory organ development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1R9F5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9K2-1", "uniprot_id": "F1R9K2_DANRE", "mass": 62302.0, "length": 565, "protein_name": "Forkhead box protein N1 isoform X1", "gene_name": "foxn1", "organism": "Zebrafish", "refseq_name": "forkhead box protein N1 isoform X1", "refseq_ac": "XP_009289890", "gene_names_uniprotkb": "foxn1; nude; whnb", "gene_names_refseq": "foxn1; nude; whnb", "protein_names_uniprotkb": "Forkhead box protein N1 isoform X1", "protein_names_refseq": "forkhead box protein N1 isoform X1", "tax_id": 7955, "disease": "T-cell immunodeficiency, congenital alopecia, and nail dystrophy (Disease Ontology:DOID:0060769); DiGeorge syndrome (Disease Ontology:DOID:11198); Nezelof syndrome (Disease Ontology:DOID:2012); nail disease (Disease Ontology:DOID:4123); primary immunodeficiency disease (Disease Ontology:DOID:612); alopecia (Disease Ontology:DOID:987)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AHA8;A0AC58H9Y9;A0AC58HA06", "ec_number_list": "", "go_molecular_function": "GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0033081 regulation of T cell differentiation in thymus;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0002250 adaptive immune response;GO:0048538 thymus development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R9K2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9L2-1", "uniprot_id": "F1R9L2_DANRE", "mass": 253669.0, "length": 2317, "protein_name": "Uncharacterized protein fam83ha", "gene_name": "fam83ha", "organism": "Zebrafish", "refseq_name": "uncharacterized protein fam83ha", "refseq_ac": "XP_693814", "gene_names_uniprotkb": "fam83ha", "gene_names_refseq": "fam83ha", "protein_names_uniprotkb": "Uncharacterized protein fam83ha", "protein_names_refseq": "uncharacterized protein fam83ha", "tax_id": 7955, "disease": "amelogenesis imperfecta type 3A (Disease Ontology:DOID:0110055)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_693814.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UV28;A0AC58H322;A0AC58H325;A0AC58H329;A0AC58H331", "ec_number_list": "", "go_molecular_function": "GO:1990254 keratin filament binding;GO:0019901 protein kinase binding", "go_cellular_component": "GO:0005856 cytoskeleton", "go_biological_process": "GO:0007165 signal transduction;GO:0030335 positive regulation of cell migration;GO:0044380 protein localization to cytoskeleton;GO:0045104 intermediate filament cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R9L2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9L4-1", "uniprot_id": "F1R9L4_DANRE", "mass": 55855.0, "length": 506, "protein_name": "Major facilitator superfamily domain-containing protein 12a isoform X1", "gene_name": "mfsd12a", "organism": "Zebrafish", "refseq_name": "major facilitator superfamily domain-containing protein 12a isoform X1", "refseq_ac": "XP_005171266", "gene_names_uniprotkb": "mfsd12a; fd45a11; si:dkey-218h11.4; wu:fd45a11; wz7872; zgc:158256", "gene_names_refseq": "fd45a11; mfsd12a; si:dkey-218h11.4; wu:fd45a11; wz7872; zgc:158256", "protein_names_uniprotkb": "Major facilitator superfamily domain-containing protein 12a isoform X1", "protein_names_refseq": "major facilitator superfamily domain-containing protein 12a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561964)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "12036288;26469318;28878041;29025994;38545650", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BIL3", "ec_number_list": "", "go_molecular_function": "GO:0015293 symporter activity;GO:0033229 cysteine transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0008643 carbohydrate transport;GO:0015811 L-cystine transport;GO:1903712 cysteine transmembrane transport;GO:0048021 regulation of melanin biosynthetic process;GO:0043474 pigment metabolic process involved in pigmentation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1R9L4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9N6-1", "uniprot_id": "F1R9N6_DANRE", "mass": 20788.0, "length": 201, "protein_name": "Histone H1", "gene_name": "si:ch211-113a14.12", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC541350", "refseq_ac": "NP_001013495", "gene_names_uniprotkb": "si:ch211-113a14.12; zgc:110216", "gene_names_refseq": "si:ch211-113a14.12; zgc:110216", "protein_names_uniprotkb": "Histone H1", "protein_names_refseq": "Histone H1-like; uncharacterized protein LOC541350", "tax_id": 7955, "disease": "", "pathway": " (dre:541350)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23413775;26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC091451.1, BM402151.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Jun 12, 2025 this sequence version replaced NP_001013495.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UY69", "ec_number_list": "", "go_molecular_function": "GO:0003690 double-stranded DNA binding;GO:0031492 nucleosomal DNA binding;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005634 nucleus;GO:0000786 nucleosome", "go_biological_process": "GO:0006334 nucleosome assembly;GO:0030261 chromosome condensation;GO:0045910 negative regulation of DNA recombination", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R9N6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9V3-1", "uniprot_id": "F1R9V3_DANRE", "mass": 71093.0, "length": 647, "protein_name": "Heat shock cognate 71 kDa protein", "gene_name": "hspa8b", "organism": "Zebrafish", "refseq_name": "heat shock protein family A (Hsp70) member 8b", "refseq_ac": "NP_001186941", "gene_names_uniprotkb": "hspa8b; si:dkey-4p15.3", "gene_names_refseq": "hspa8b; si:dkey-4p15.3", "protein_names_uniprotkb": "Heat shock cognate 71 kDa protein", "protein_names_refseq": "heat shock cognate 70 kDa protein; heat shock protein family A (Hsp70) member 8b", "tax_id": 7955, "disease": "", "pathway": " (dre:562935)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "24349563;25398274;26469318;27189481;28252024;30501106;30532148;33329019;35830921;36226668", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01037513.1, SRR26395062.1222015.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NWK9", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0031072 heat shock protein binding;GO:0044183 protein folding chaperone", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0042026 protein refolding", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1R9V3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R9W6-1", "uniprot_id": "F1R9W6_DANRE", "mass": 61413.0, "length": 546, "protein_name": "Uncharacterized protein LOC550326 precursor", "gene_name": "wu:fi12h07", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC550326 precursor", "refseq_ac": "NP_001017633", "gene_names_uniprotkb": "wu:fi12h07; fi12h07; zgc:110239", "gene_names_refseq": "fi12h07; wu:fi12h07; zgc:110239", "protein_names_uniprotkb": "Uncharacterized protein LOC550326 precursor", "protein_names_refseq": "uncharacterized protein LOC550326 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:550326)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;35596834", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092817.1, SRR26395015.1831646.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505377, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Jun 3, 2015 this sequence version replaced NP_001017633.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N510", "ec_number_list": "", "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity;GO:0008656 cysteine-type endopeptidase activator activity involved in apoptotic process", "go_cellular_component": "GO:0005615 extracellular space;GO:0005764 lysosome", "go_biological_process": "GO:0006955 immune response;GO:2001235 positive regulation of apoptotic signaling pathway;GO:0051603 proteolysis involved in protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1R9W6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RA32-1", "uniprot_id": "F1RA32_DANRE", "mass": 23887.0, "length": 213, "protein_name": "Ependymin-like 1 precursor", "gene_name": "epdl1", "organism": "Zebrafish", "refseq_name": "ependymin-like 1 precursor", "refseq_ac": "NP_001280631", "gene_names_uniprotkb": "epdl1; uo:ion005", "gene_names_refseq": "epdl1; uo:ion005", "protein_names_uniprotkb": "Ependymin-like 1 precursor", "protein_names_refseq": "Danio_Tj; ependymin-like 1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100302470)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "17302986;19166982;23438205;23598338;26469318;30067976", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01007014.1, EH507827.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH507827.1, EH456141.1, JBMGRA010000007.1 and EH514436.1. On Jun 14, 2014 this sequence version replaced XP_002662640.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P0S8", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005764 lysosome", "go_biological_process": "GO:0007160 cell-matrix adhesion", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1RA32-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RA98-1", "uniprot_id": "F1RA98_DANRE", "mass": 14622.0, "length": 133, "protein_name": "FAU ubiquitin like and ribosomal protein S30 fusion b", "gene_name": "faub", "organism": "Zebrafish", "refseq_name": "FAU ubiquitin like and ribosomal protein S30 fusion b", "refseq_ac": "NP_001017866", "gene_names_uniprotkb": "faub; im:7142593; zgc:110695", "gene_names_refseq": "faub; im:7142593; zgc:110695", "protein_names_uniprotkb": "FAU ubiquitin like and ribosomal protein S30 fusion b", "protein_names_refseq": "FAU ubiquitin like and ribosomal protein S30 fusion b; Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b", "tax_id": 7955, "disease": "", "pathway": " (dre:550564)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "28252024;33329019", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5J0", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0022627 cytosolic small ribosomal subunit", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1RA98-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAC0-1", "uniprot_id": "F1RAC0_DANRE", "mass": 143920.0, "length": 1247, "protein_name": "Uncharacterized protein aebp1b isoform X1", "gene_name": "aebp1b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein aebp1b isoform X1", "refseq_ac": "XP_696022", "gene_names_uniprotkb": "aebp1b", "gene_names_refseq": "aebp1b", "protein_names_uniprotkb": "Uncharacterized protein aebp1b isoform X1", "protein_names_refseq": "uncharacterized protein aebp1b isoform X1", "tax_id": 7955, "disease": "Ehlers-Danlos syndrome classic-like 2 (Disease Ontology:DOID:0080732)", "pathway": " (dre:567630)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_696022.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEF3", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004180 carboxypeptidase activity;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0004181 metallocarboxypeptidase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RAC0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAC1-1", "uniprot_id": "F1RAC1_DANRE", "mass": 128341.0, "length": 1146, "protein_name": "Zinc finger and BTB domain-containing protein 11", "gene_name": "zbtb11", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 11", "refseq_ac": "NP_997815", "gene_names_uniprotkb": "zbtb11; ZNF-U69274; man; marsanne; mne; si:dkey-98p3.1; si:dkeyp-116g9.2; wu:fc06h02; wu:fe36e08", "gene_names_refseq": "ZNF-U69274; man; marsanne; mne; si:dkey-98p3.1; si:dkeyp-116g9.2; wu:fc06h02; wu:fe36e08; zbtb11", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 11", "protein_names_refseq": "zinc finger and BTB domain-containing protein 11", "tax_id": 7955, "disease": "autosomal recessive intellectual developmental disorder 69 (Disease Ontology:DOID:0081230)", "pathway": " (dre:555217)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15520368;25534026;26469318;28382966;29893856", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01011268.1, GFIL01037777.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Jun 25, 2025 this sequence version replaced NP_997815.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; We report two ID families segregating ZBTB11 biallelic mutations disrupting Zn2+-binding motifs and provide functional evidence linking ZBTB11 dysfunction to this phenotype, [RefSeq, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHU6", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0030223 neutrophil differentiation;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F1RAC1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAF7-1", "uniprot_id": "F1RAF7_DANRE", "mass": 67936.0, "length": 593, "protein_name": "RNA polymerase II elongation factor ELL2", "gene_name": "LOC565819", "organism": "Zebrafish", "refseq_name": "RNA polymerase II elongation factor ELL2", "refseq_ac": "XP_694180", "gene_names_uniprotkb": "LOC565819", "gene_names_refseq": "LOC565819", "protein_names_uniprotkb": "RNA polymerase II elongation factor ELL2", "protein_names_refseq": "RNA polymerase II elongation factor ELL2", "tax_id": 7955, "disease": "", "pathway": " (dre:565819)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_694180.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVZ0", "ec_number_list": "", "go_molecular_function": "GO:0003746 translation elongation factor activity;GO:0000987 cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0008023 transcription elongation factor complex", "go_biological_process": "GO:0006368 transcription elongation by RNA polymerase II;GO:0032968 positive regulation of transcription elongation by RNA polymerase II;GO:0042795 snRNA transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RAF7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAH2-1", "uniprot_id": "F1RAH2_DANRE", "mass": 40932.0, "length": 362, "protein_name": "Major histocompatibility complex class I LGA precursor", "gene_name": "mhc1lga", "organism": "Zebrafish", "refseq_name": "major histocompatibility complex class I LGA precursor", "refseq_ac": "NP_001314813", "gene_names_uniprotkb": "mhc1lga; mhc1lia; si:dkey-52p2.6", "gene_names_refseq": "mhc1lga; mhc1lia; si:dkey-52p2.6", "protein_names_uniprotkb": "Major histocompatibility complex class I LGA precursor", "protein_names_refseq": "major histocompatibility complex class I LGA precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100535946); (R-DRE-1236974); (R-DRE-1236977); (R-DRE-6798695); (R-DRE-917977); (R-DRE-983170)", "pathway_count": 6, "publication_count": 4, "publication_id_list": "24631581;24683187;33279476;37179373", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.21409107.1, SRR32588730.7733588.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH434256.1 and JBMGRA010000025.1. On May 27, 2016 this sequence version replaced XP_001920281.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8F9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1RAH2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAH3-1", "uniprot_id": "F1RAH3_DANRE", "mass": 37833.0, "length": 332, "protein_name": "Major histocompatibility complex class I LDA precursor", "gene_name": "mhc1lda", "organism": "Zebrafish", "refseq_name": "major histocompatibility complex class I LDA precursor", "refseq_ac": "NP_001314838", "gene_names_uniprotkb": "mhc1lda; si:ch211-147g22.1", "gene_names_refseq": "mhc1lda; si:ch211-147g22.1", "protein_names_uniprotkb": "Major histocompatibility complex class I LDA precursor", "protein_names_refseq": "hereditary hemochromatosis protein homolog; major histocompatibility complex class I LDA precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100149810); (R-DRE-1236974); (R-DRE-1236977); (R-DRE-6798695); (R-DRE-917977); (R-DRE-983170)", "pathway_count": 6, "publication_count": 7, "publication_id_list": "24631581;24683187;26254596;26469318;30290758;33279476;37179373", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01024848.1, GDQQ01002614.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN08196787 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9J3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1RAH3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAH8-1", "uniprot_id": "F1RAH8_DANRE", "mass": 53704.0, "length": 450, "protein_name": "RNA-binding motif protein, X-linked 2", "gene_name": "rbmx2", "organism": "Zebrafish", "refseq_name": "RNA-binding motif protein, X-linked 2", "refseq_ac": "NP_001020337", "gene_names_uniprotkb": "rbmx2; im:7141316; zgc:113884", "gene_names_refseq": "im:7141316; rbmx2; zgc:113884", "protein_names_uniprotkb": "RNA-binding motif protein, X-linked 2", "protein_names_refseq": "RNA-binding motif protein, X-linked 2", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.635522.1, SRR32588719.9692849.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On or before Jul 18, 2025 this sequence version replaced XP_005170325.1, NP_001020337.1., [RefSeq]; Involved in pre-mRNA splicing as component of the activated spliceosome. As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BHL6", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005686 U2 snRNP;GO:0071011 precatalytic spliceosome", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RAH8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAI4-1", "uniprot_id": "F1RAI4_DANRE", "mass": 30086.0, "length": 272, "protein_name": "Homeobox protein Nkx-6.3", "gene_name": "nkx6.3", "organism": "Zebrafish", "refseq_name": "homeobox protein Nkx-6.3", "refseq_ac": "NP_001159612", "gene_names_uniprotkb": "nkx6.3", "gene_names_refseq": "nkx6.3", "protein_names_uniprotkb": "Homeobox protein Nkx-6.3", "protein_names_refseq": "homeobox protein Nkx-6.3; transcription factor Nkx6.3", "tax_id": 7955, "disease": "", "pathway": " (dre:558978)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "17376808;20112453;24004948", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588726.36265009.1, SRR32588715.3352214.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505383 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On May 21, 2010 this sequence version replaced XP_684904.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSG6", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1RAI4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAQ5-1", "uniprot_id": "F1RAQ5_DANRE", "mass": 27908.0, "length": 260, "protein_name": "Adaptin ear-binding coat-associated protein 2", "gene_name": "necap2", "organism": "Zebrafish", "refseq_name": "adaptin ear-binding coat-associated protein 2", "refseq_ac": "NP_001230093", "gene_names_uniprotkb": "necap2; zgc:110468", "gene_names_refseq": "necap2; zgc:110468", "protein_names_uniprotkb": "Adaptin ear-binding coat-associated protein 2", "protein_names_refseq": "adaptin ear-binding coat-associated protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:553536)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;26566657;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078360.1, SRR26395012.640734.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1 and BC078360.1. On Jul 30, 2011 this sequence version replaced XP_003200961.1., [RefSeq]; Involved in endocytosis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P218", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0030125 clathrin vesicle coat;GO:0030665 clathrin-coated vesicle membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0015031 protein transport;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1RAQ5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RAT9-1", "uniprot_id": "F1RAT9_DANRE", "mass": 39985.0, "length": 363, "protein_name": "N-alpha-acetyltransferase 30", "gene_name": "naa30", "organism": "Zebrafish", "refseq_name": "N-alpha-acetyltransferase 30", "refseq_ac": "NP_001129721", "gene_names_uniprotkb": "naa30; zgc:194204", "gene_names_refseq": "naa30; zgc:194204", "protein_names_uniprotkb": "N-alpha-acetyltransferase 30; 2.3.1.256; N-acetyltransferase 12; N-acetyltransferase MAK3 homolog; NatC catalytic subunit", "protein_names_refseq": "N-alpha-acetyltransferase 30", "tax_id": 7955, "disease": "", "pathway": " (dre:100192212)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26251455;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC167969.1, SRR5865382.28133.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH538903.1, BC167969.1, EH560112.1, JBMGRA010000017.1, EB927767.1, BG303862.1 and CT704192.2. On Oct 1, 2011 this sequence version replaced NP_001129721.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NLV5", "ec_number_list": "2.3.1.256;2.3.1.258;2.3.1.-", "go_molecular_function": "GO:0004596 protein-N-terminal amino-acid acetyltransferase activity;GO:0120518 protein N-terminal-methionine acetyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0031417 NatC complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1RAT9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RB41-1", "uniprot_id": "F1RB41_DANRE", "mass": 53506.0, "length": 490, "protein_name": "Solute carrier family 2, facilitated glucose transporter member 6", "gene_name": "slc2a6", "organism": "Zebrafish", "refseq_name": "solute carrier family 2, facilitated glucose transporter member 6", "refseq_ac": "XP_689092", "gene_names_uniprotkb": "slc2a6", "gene_names_refseq": "slc2a6", "protein_names_uniprotkb": "Solute carrier family 2, facilitated glucose transporter member 6; Glucose transporter type 6", "protein_names_refseq": "solute carrier family 2, facilitated glucose transporter member 6", "tax_id": 7955, "disease": "", "pathway": " (dre:560602); (R-DRE-189200)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_689092.5. COMPLETENESS: full length., [RefSeq]; Probable sugar transporter that acts as a regulator of glycolysis in macrophages. Does not transport glucose., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TDP0", "ec_number_list": "", "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0055056 D-glucose transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane;GO:0005765 lysosomal membrane", "go_biological_process": "GO:0006110 regulation of glycolytic process;GO:0055085 transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RB41-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RB48-1", "uniprot_id": "F1RB48_DANRE", "mass": 37096.0, "length": 332, "protein_name": "Large ribosomal subunit protein mL44", "gene_name": "mrpl44", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein mL44", "refseq_ac": "NP_001025431", "gene_names_uniprotkb": "mrpl44; zgc:114114", "gene_names_refseq": "mrpl44; zgc:114114", "protein_names_uniprotkb": "Large ribosomal subunit protein mL44; 39S ribosomal protein L44, mitochondrial", "protein_names_refseq": "large ribosomal subunit protein mL44", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 16 (Disease Ontology:DOID:0111469)", "pathway": " (dre:571210); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "26469318;31094706", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395050.35501.1, SRR26395062.928934.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Jul 20, 2010 this sequence version replaced NP_001025431.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Component of the 39S subunit of mitochondrial ribosome. May have a function in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7N7", "ec_number_list": "", "go_molecular_function": "GO:0003725 double-stranded RNA binding;GO:0004525 ribonuclease III activity", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit;GO:0005634 nucleus;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0006396 RNA processing;GO:0070125 mitochondrial translational elongation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1RB48-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RBF1-1", "uniprot_id": "F1RBF1_DANRE", "mass": 54697.0, "length": 492, "protein_name": "Interleukin-20 receptor subunit alpha precursor", "gene_name": "il20ra", "organism": "Zebrafish", "refseq_name": "interleukin-20 receptor subunit alpha precursor", "refseq_ac": "NP_001073144", "gene_names_uniprotkb": "il20ra; crfb8; im:7156745; si:ch211-272f15.1; zgc:158705", "gene_names_refseq": "crfb8; il20ra; im:7156745; si:ch211-272f15.1; zgc:158705", "protein_names_uniprotkb": "Interleukin-20 receptor subunit alpha precursor", "protein_names_refseq": "class II cytokine receptor crfb8; cytokine receptor family member b8; interleukin-20 receptor subunit alpha precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:556728); (R-DRE-8854691)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "17371995;18039395;21048110;25891274;26469318;35134499;35194032;35829917;37146740;37863126", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EF014958.1, AM084416.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC129396.1, EH437695.1, EF014958.1 and EH511358.1. On Nov 25, 2009 this sequence version replaced NP_001073144.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAW2", "ec_number_list": "", "go_molecular_function": "GO:0004896 cytokine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0019221 cytokine-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1RBF1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RBH2-1", "uniprot_id": "F1RBH2_DANRE", "mass": 21533.0, "length": 186, "protein_name": "ADP-ribosylation factor-like 8Bb", "gene_name": "arl8bb", "organism": "Zebrafish", "refseq_name": "ADP-ribosylation factor-like 8Bb", "refseq_ac": "NP_001313407", "gene_names_uniprotkb": "arl8bb", "gene_names_refseq": "arl8bb", "protein_names_uniprotkb": "ADP-ribosylation factor-like 8Bb", "protein_names_refseq": "ADP-ribosylation factor-like 8Bb", "tax_id": 7955, "disease": "", "pathway": " (dre:562445)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "25014315;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01008544.1, EH495456.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On May 19, 2016 this sequence version replaced XP_002663861.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8N8", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005819 spindle;GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0031901 early endosome membrane;GO:1904115 axon cytoplasm", "go_biological_process": "GO:0015031 protein transport;GO:0051301 cell division;GO:0008089 anterograde axonal transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1RBH2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RBJ9-1", "uniprot_id": "F1RBJ9_DANRE", "mass": 28829.0, "length": 257, "protein_name": "Thiamine pyrophosphokinase", "gene_name": "tpk1", "organism": "Zebrafish", "refseq_name": "thiamine pyrophosphokinase 1 isoform X1", "refseq_ac": "XP_005162672", "gene_names_uniprotkb": "tpk1; zgc:101685", "gene_names_refseq": "tpk1; zgc:101685", "protein_names_uniprotkb": "Thiamine pyrophosphokinase; 2.7.6.2", "protein_names_refseq": "thiamine pyrophosphokinase 1 isoform X1", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162); inherited metabolic disorder (Disease Ontology:DOID:655)", "pathway": " (dre:450054); (R-DRE-196819)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP) utilizing UTP and therefore links the biosynthesis of TPP to pyrimidines metabolism. By producing thiamine pyrophosphate, a cofactor of the mitochondrial pyruvate dehydrogenase indirectly regulates pyruvate oxidation and lipogenesis. Although it can also catalyze thiamine phosphorylation using ATP and CTP in vitro, it does so with significantly lower efficiency and without physiological relevance evidence., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9G6", "ec_number_list": "2.7.6.2", "go_molecular_function": "GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0004788 thiamine diphosphokinase activity;GO:0030975 thiamine binding", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0009229 thiamine diphosphate biosynthetic process;GO:0006772 thiamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RBJ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RBM7-1", "uniprot_id": "F1RBM7_DANRE", "mass": 68390.0, "length": 600, "protein_name": "Parathyroid hormone 2 receptor isoform X1", "gene_name": "pth2rb", "organism": "Zebrafish", "refseq_name": "parathyroid hormone 2 receptor isoform X1", "refseq_ac": "XP_017208978", "gene_names_uniprotkb": "pth2rb", "gene_names_refseq": "pth2rb", "protein_names_uniprotkb": "Parathyroid hormone 2 receptor isoform X1", "protein_names_refseq": "parathyroid hormone 2 receptor isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:564876)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_017208978.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z4C3", "ec_number_list": "", "go_molecular_function": "GO:0017046 peptide hormone binding;GO:0008528 G protein-coupled peptide receptor activity;GO:0004991 parathyroid hormone receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway;GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RBM7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RBN9-1", "uniprot_id": "F1RBN9_DANRE", "mass": 43684.0, "length": 383, "protein_name": "Transmembrane protein 198", "gene_name": "tmem198aa", "organism": "Zebrafish", "refseq_name": "transmembrane protein 198", "refseq_ac": "XP_691948", "gene_names_uniprotkb": "tmem198aa", "gene_names_refseq": "tmem198aa", "protein_names_uniprotkb": "Transmembrane protein 198", "protein_names_refseq": "transmembrane protein 198", "tax_id": 7955, "disease": "", "pathway": " (dre:553226)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_691948.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TBA0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0031410 cytoplasmic vesicle", "go_biological_process": "GO:0090263 positive regulation of canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RBN9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RC23-1", "uniprot_id": "F1RC23_DANRE", "mass": 102170.0, "length": 928, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "ttbk2b", "organism": "Zebrafish", "refseq_name": "tau-tubulin kinase 2b", "refseq_ac": "NP_001313220", "gene_names_uniprotkb": "ttbk2b; fj62e10; sb:eu1102; si:dkey-12h9.11; si:dkey-12h9.14; wu:fj62e10", "gene_names_refseq": "fj62e10; sb:eu1102; si:dkey-12h9.11; si:dkey-12h9.14; ttbk2b; wu:fj62e10", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "tau-tubulin kinase 2b", "tax_id": 7955, "disease": "spinocerebellar ataxia 11 (Disease Ontology:DOID:0050961)", "pathway": " (dre:569881)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;28855284", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01036679.1, GDQH01013228.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On May 13, 2016 this sequence version replaced XP_698389.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence because no single transcript was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8V6;F1Q8Z7", "ec_number_list": "2.7.11.1;2.7.11.13;2.7.11.25;2.7.10.1;2.7.11.22;2.7.11.21;2.7.11.17;2.7.12.1;2.7.12.2;2.7.11.24;2.7.10.2;2.7.11.23;2.7.1.150;2.7.11.12;2.7.11.39;2.7.11.11;2.7.1.153;2.7.1.137;2.7.1.154;2.7.11.26;2.7.11.31", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0036064 ciliary basal body;GO:0035869 ciliary transition zone", "go_biological_process": "GO:0007165 signal transduction;GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1RC23-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RC32-1", "uniprot_id": "F1RC32_DANRE", "mass": 34119.0, "length": 308, "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "napga", "organism": "Zebrafish", "refseq_name": "N-ethylmaleimide-sensitive factor attachment protein, gamma a", "refseq_ac": "NP_001013498", "gene_names_uniprotkb": "napga; fi35f06; napgl; wu:fi35f06; zgc:110177", "gene_names_refseq": "fi35f06; napga; napgl; wu:fi35f06; zgc:110177", "protein_names_uniprotkb": "Gamma-soluble NSF attachment protein; N-ethylmaleimide-sensitive factor attachment protein gamma", "protein_names_refseq": "N-ethylmaleimide-sensitive factor attachment protein, gamma a; N-ethylmaleimide-sensitive factor attachment protein, gamma, like", "tax_id": 7955, "disease": "", "pathway": " (dre:541353)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC164747.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505377, SAMEA3505379 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Jun 12, 2025 this sequence version replaced NP_001013498.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N4E8", "ec_number_list": "", "go_molecular_function": "GO:0019905 syntaxin binding;GO:0005483 soluble NSF attachment protein activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0031201 SNARE complex;GO:0016020 membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1RC32-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RCN2-1", "uniprot_id": "F1RCN2_DANRE", "mass": 169130.0, "length": 1502, "protein_name": "Chromatin remodeling regulator CECR2 isoform X1", "gene_name": "cecr2", "organism": "Zebrafish", "refseq_name": "chromatin remodeling regulator CECR2 isoform X1", "refseq_ac": "XP_005174419", "gene_names_uniprotkb": "cecr2", "gene_names_refseq": "cecr2", "protein_names_uniprotkb": "Chromatin remodeling regulator CECR2 isoform X1", "protein_names_refseq": "chromatin remodeling regulator CECR2 isoform X1", "tax_id": 7955, "disease": "anencephaly (Disease Ontology:DOID:0060668)", "pathway": " (dre:799918)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BLL4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0090537 CERF complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0007338 single fertilization;GO:0002244 hematopoietic progenitor cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RCN2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RCT7-1", "uniprot_id": "F1RCT7_DANRE", "mass": 144081.0, "length": 1309, "protein_name": "Uncharacterized protein kif16bb isoform X1", "gene_name": "kif16bb", "organism": "Zebrafish", "refseq_name": "uncharacterized protein kif16bb isoform X1", "refseq_ac": "XP_695424", "gene_names_uniprotkb": "kif16bb", "gene_names_refseq": "kif16bb", "protein_names_uniprotkb": "Uncharacterized protein kif16bb isoform X1", "protein_names_refseq": "uncharacterized protein kif16bb isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567045)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_695424.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UTB3", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0016887 ATP hydrolysis activity;GO:0008574 plus-end-directed microtubule motor activity;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005871 kinesin complex", "go_biological_process": "GO:0048731 system development;GO:0047496 vesicle transport along microtubule;GO:0007018 microtubule-based movement", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RCT7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RCW4-1", "uniprot_id": "F1RCW4_DANRE", "mass": 36767.0, "length": 328, "protein_name": "Retinol dehydrogenase 5 isoform X1", "gene_name": "rdh5", "organism": "Zebrafish", "refseq_name": "retinol dehydrogenase 5 isoform X1", "refseq_ac": "XP_009294380", "gene_names_uniprotkb": "rdh5; hsd17b9; im:6901729; si:dkey-102c8.5", "gene_names_refseq": "hsd17b9; im:6901729; rdh5; si:dkey-102c8.5", "protein_names_uniprotkb": "Retinol dehydrogenase 5 isoform X1", "protein_names_refseq": "retinol dehydrogenase 5 isoform X1", "tax_id": 7955, "disease": "fundus albipunctatus (Disease Ontology:DOID:11105); night blindness (Disease Ontology:DOID:8499)", "pathway": " (dre:556528); (R-DRE-2453902); (R-DRE-5365859)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AM49", "ec_number_list": "", "go_molecular_function": "GO:0004745 all-trans-retinol dehydrogenase (NAD+) activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "", "go_biological_process": "GO:0001523 retinoid metabolic process;GO:0060041 retina development in camera-type eye;GO:0008202 steroid metabolic process;GO:0035238 vitamin A biosynthetic process;GO:0001754 eye photoreceptor cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RCW4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RCY7-1", "uniprot_id": "F1RCY7_DANRE", "mass": 94949.0, "length": 853, "protein_name": "RNA-binding protein 15", "gene_name": "rbm15", "organism": "Zebrafish", "refseq_name": "RNA-binding protein 15", "refseq_ac": "XP_001335820", "gene_names_uniprotkb": "rbm15", "gene_names_refseq": "rbm15", "protein_names_uniprotkb": "RNA-binding protein 15; One-twenty two protein 1; RNA-binding motif protein 15", "protein_names_refseq": "RNA-binding protein 15", "tax_id": 7955, "disease": "", "pathway": " (dre:798517)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PS32", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0031965 nuclear membrane", "go_biological_process": "GO:0001889 liver development;GO:0045637 regulation of myeloid cell differentiation;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RCY7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RD59-1", "uniprot_id": "F1RD59_DANRE", "mass": 14522.0, "length": 127, "protein_name": "GEL complex subunit OPTI", "gene_name": "rab5if", "organism": "Zebrafish", "refseq_name": "GEL complex subunit OPTI", "refseq_ac": "NP_956144", "gene_names_uniprotkb": "rab5if; c20orf24; c23h20orf24; fi26d09; wu:fi26d09; zgc:55393", "gene_names_refseq": "c20orf24; c23h20orf24; fi26d09; rab5if; wu:fi26d09; zgc:55393", "protein_names_uniprotkb": "GEL complex subunit OPTI", "protein_names_refseq": "GEL complex subunit OPTI; c23h20orf24 homolog", "tax_id": 7955, "disease": "craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 2 (Disease Ontology:DOID:0081125)", "pathway": " (dre:334006); (R-DRE-9864848)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "11997344;24633177;26469318;27189481", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PC00", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0097250 mitochondrial respirasome assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1RD59-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RD68-1", "uniprot_id": "F1RD68_DANRE", "mass": 33386.0, "length": 291, "protein_name": "palmitoyl-CoA hydrolase", "gene_name": "ppt2a.1", "organism": "Zebrafish", "refseq_name": "lysosomal thioesterase PPT2a.1 precursor", "refseq_ac": "NP_956978", "gene_names_uniprotkb": "ppt2a.1; zgc:113969; zgc:66024", "gene_names_refseq": "ppt2a.1; zgc:113969; zgc:66024", "protein_names_uniprotkb": "palmitoyl-CoA hydrolase; 3.1.2.2", "protein_names_refseq": "lysosomal thioesterase PPT2a.1 precursor", "tax_id": 7955, "disease": "neuronal ceroid lipofuscinosis (Disease Ontology:DOID:14503)", "pathway": " (dre:393657)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;34016526", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097047.1, SRR26395017.1085539.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476744 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1, EH499664.1, EH450659.1, EH476462.1 and EH566627.1. On or before Mar 19, 2018 this sequence version replaced NP_001028911.1, NP_956978.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Catalyzes the cleavage of thioester bonds from S-palmitoyl-CoA or S-palmitoyl-N-acetylcysteamine (unbranched structures) but does not have activity against palmitoylcysteine or palmitoylated proteins, branched structures or bulky head groups. Conversely, hydrolyzes both long and short chain fatty acyl-CoA substrate., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PD90;E7FC80", "ec_number_list": "3.1.2.2;3.1.2.22", "go_molecular_function": "GO:0016790 thiolester hydrolase activity;GO:0098599 palmitoyl hydrolase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005764 lysosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1RD68-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RD72-1", "uniprot_id": "F1RD72_DANRE", "mass": 35054.0, "length": 301, "protein_name": "Sulfotransferase", "gene_name": "sult1st7", "organism": "Zebrafish", "refseq_name": "sulfotransferase family 1, cytosolic sulfotransferase 7", "refseq_ac": "NP_001132953", "gene_names_uniprotkb": "sult1st7; si:ch211-196g2.6", "gene_names_refseq": "si:ch211-196g2.6; sult1st7", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "SULT1 ST7; sulfotransferase family 1, cytosolic sulfotransferase 7", "tax_id": 7955, "disease": "", "pathway": " (dre:100196920); (R-DRE-156584); (R-DRE-9753281)", "pathway_count": 3, "publication_count": 7, "publication_id_list": "18632167;20446911;22360938;24083816;24642098;31748465;34143769", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EU502841.1, SRR32588719.13903206.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On or before Mar 28, 2018 this sequence version replaced XP_017213027.1, NP_001132953.1. Sequence Note:., [RefSeq]; Developmental expression experiments revealed distinct patterns of expression of SULT1 ST7 during embryonic development and throughout the larval stage onto maturity., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z2D3", "ec_number_list": "2.8.2.-;2.8.2.n2", "go_molecular_function": "GO:0008146 sulfotransferase activity;GO:0004062 aryl sulfotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0051923 sulfation;GO:0006805 xenobiotic metabolic process;GO:0006584 catecholamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F1RD72-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RDK4-1", "uniprot_id": "F1RDK4_DANRE", "mass": 186082.0, "length": 1676, "protein_name": "Rho GTPase-activating protein 32", "gene_name": "arhgap32a", "organism": "Zebrafish", "refseq_name": "rho GTPase-activating protein 32 isoform X1", "refseq_ac": "XP_690921", "gene_names_uniprotkb": "arhgap32a", "gene_names_refseq": "arhgap32a", "protein_names_uniprotkb": "Rho GTPase-activating protein 32; Rho-type GTPase-activating protein 32; Rho/Cdc42/Rac GTPase-activating protein RICS", "protein_names_refseq": "rho GTPase-activating protein 32 isoform X1", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041)", "pathway": " (R-DRE-8980692); (R-DRE-9013026); (R-DRE-9013106); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013406); (R-DRE-9013408); (R-DRE-9013409); (R-DRE-9013423); (R-DRE-9035034); (R-DRE-9768727)", "pathway_count": 12, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_690921.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEW2", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005737 cytoplasm;GO:0014069 postsynaptic density;GO:0012505 endomembrane system", "go_biological_process": "GO:0007264 small GTPase-mediated signal transduction;GO:0061001 regulation of dendritic spine morphogenesis;GO:0150052 regulation of postsynapse assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RDK4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RDT5-1", "uniprot_id": "F1RDT5_DANRE", "mass": 61434.0, "length": 540, "protein_name": "CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase", "gene_name": "pgs1", "organism": "Zebrafish", "refseq_name": "CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial isoform X1", "refseq_ac": "XP_003199680", "gene_names_uniprotkb": "pgs1", "gene_names_refseq": "pgs1", "protein_names_uniprotkb": "CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; 2.7.8.5", "protein_names_refseq": "CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100534896)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_003199680.2. COMPLETENESS: full length., [RefSeq]; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RSX4", "ec_number_list": "2.7.8.5", "go_molecular_function": "GO:0005524 ATP binding;GO:0008444 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0032049 cardiolipin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RDT5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RDV6-1", "uniprot_id": "F1RDV6_DANRE", "mass": 59081.0, "length": 539, "protein_name": "3.1.3.16; Dual specificity protein phosphatase 16", "gene_name": "dusp16", "organism": "Zebrafish", "refseq_name": "dual specificity protein phosphatase 16", "refseq_ac": "NP_998405", "gene_names_uniprotkb": "dusp16; wu:fi04g09; zgc:77247", "gene_names_refseq": "dusp16; wu:fi04g09; zgc:77247", "protein_names_uniprotkb": "3.1.3.16; Dual specificity protein phosphatase 16", "protein_names_refseq": "dual specificity protein phosphatase 16", "tax_id": 7955, "disease": "", "pathway": " (dre:406523); (R-DRE-112409); (R-DRE-5675221)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.157969.1, GFIL01009037.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505390, SAMEA3505392 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Sep 8, 2016 this sequence version replaced NP_998405.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PEU4", "ec_number_list": "3.1.3.16;3.1.3.48", "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity;GO:0008330 protein tyrosine/threonine phosphatase activity;GO:0033550 MAP kinase tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1RDV6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RDV9-1", "uniprot_id": "F1RDV9_DANRE", "mass": 6988.0, "length": 58, "protein_name": "DNA-directed RNA polymerases I, II, and III subunit RPABC4", "gene_name": "polr2k", "organism": "Zebrafish", "refseq_name": "DNA-directed RNA polymerases I, II, and III subunit RPABC4", "refseq_ac": "NP_001186035", "gene_names_uniprotkb": "polr2k; zgc:171795", "gene_names_refseq": "polr2k; zgc:171795", "protein_names_uniprotkb": "DNA-directed RNA polymerases I, II, and III subunit RPABC4; DNA-directed RNA polymerase II subunit K", "protein_names_refseq": "DNA-directed RNA polymerases I, II, and III subunit RPABC4; polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa", "tax_id": 7955, "disease": "", "pathway": " (dre:796803); (R-DRE-113418); (R-DRE-5250924); (R-DRE-674695); (R-DRE-6781823); (R-DRE-6782135); (R-DRE-6782210); (R-DRE-6796648); (R-DRE-6803529); (R-DRE-6807505); (R-DRE-72086); (R-DRE-72163); (R-DRE-72165); (R-DRE-72203); (R-DRE-73762); (R-DRE-73772); (R-DRE-73776); (R-DRE-73779); (R-DRE-73863); (R-DRE-75953); (R-DRE-75955); (R-DRE-76042); (R-DRE-76061); (R-DRE-76066); (R-DRE-76071); (R-DRE-77075); (R-DRE-9018519); (R-DRE-9770562)", "pathway_count": 28, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH439048.1, EH544176.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH439048.1, BC150398.1 and EH565304.1. On Nov 21, 2010 this sequence version replaced XP_002665538.1., [RefSeq]; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and a small RNAs, such as 5S rRNA and tRNAs, respectively., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NXC4", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003899 DNA-directed RNA polymerase activity", "go_cellular_component": "GO:0005665 RNA polymerase II, core complex;GO:0005736 RNA polymerase I complex;GO:0005666 RNA polymerase III complex", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F1RDV9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RDW2-1", "uniprot_id": "F1RDW2_DANRE", "mass": 82919.0, "length": 744, "protein_name": "Uncharacterized protein LOC100144405 precursor", "gene_name": "si:ch211-180f4.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100144405 precursor", "refseq_ac": "NP_001373634", "gene_names_uniprotkb": "si:ch211-180f4.1; sc:d0413", "gene_names_refseq": "sc:d0413; si:ch211-180f4.1", "protein_names_uniprotkb": "Uncharacterized protein LOC100144405 precursor", "protein_names_refseq": "uncharacterized protein LOC100144405 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100144405)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;26492970;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.11321903.1, CU468799.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Aug 29, 2020 this sequence version replaced XP_003199104.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RF42", "ec_number_list": "", "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1RDW2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RDX1-1", "uniprot_id": "F1RDX1_DANRE", "mass": 34740.0, "length": 325, "protein_name": "4.2.1.18; Methylglutaconyl-CoA hydratase, mitochondrial", "gene_name": "auh", "organism": "Zebrafish", "refseq_name": "methylglutaconyl-CoA hydratase, mitochondrial", "refseq_ac": "NP_001003576", "gene_names_uniprotkb": "auh; wu:fb81b10; zgc:101057", "gene_names_refseq": "auh; wu:fb81b10; zgc:101057", "protein_names_uniprotkb": "4.2.1.18; Methylglutaconyl-CoA hydratase, mitochondrial", "protein_names_refseq": "AU RNA binding protein/enoyl-Coenzyme A hydratase; methylglutaconyl-CoA hydratase, mitochondrial", "tax_id": 7955, "disease": "3-methylglutaconic aciduria type 1 (Disease Ontology:DOID:0110002); renal tubular transport disease (Disease Ontology:DOID:447)", "pathway": " (dre:445182); (R-DRE-70895)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "20627962;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01002059.1, GDQQ01011086.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1, EH506229.1 and EH460121.1. On Feb 22, 2014 this sequence version replaced NP_001003576.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N1I7", "ec_number_list": "4.2.1.18", "go_molecular_function": "GO:0003723 RNA binding;GO:0004300 enoyl-CoA hydratase activity;GO:0004490 methylglutaconyl-CoA hydratase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006635 fatty acid beta-oxidation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1RDX1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RE12-1", "uniprot_id": "F1RE12_DANRE", "mass": 51799.0, "length": 459, "protein_name": "Zinc finger and BTB domain-containing protein 8A", "gene_name": "zbtb8a", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 8A", "refseq_ac": "NP_001035340", "gene_names_uniprotkb": "zbtb8a; zgc:136874", "gene_names_refseq": "zbtb8a; zgc:136874", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 8A", "protein_names_refseq": "zinc finger and BTB domain-containing protein 8A", "tax_id": 7955, "disease": "", "pathway": " (dre:678523)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115302.1, GDQQ01008607.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Sep 30, 2011 this sequence version replaced NP_001035340.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N8I9", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F1RE12-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RE14-1", "uniprot_id": "F1RE14_DANRE", "mass": 52731.0, "length": 473, "protein_name": "Cathepsin F", "gene_name": "ctsf", "organism": "Zebrafish", "refseq_name": "cathepsin F precursor", "refseq_ac": "NP_001071036", "gene_names_uniprotkb": "ctsf; cb420; sb:cb420; zgc:153093", "gene_names_refseq": "cb420; ctsf; sb:cb420; zgc:153093", "protein_names_uniprotkb": "Cathepsin F; 3.4.22.41", "protein_names_refseq": "cathepsin F precursor", "tax_id": 7955, "disease": "neuronal ceroid lipofuscinosis 13 (Disease Ontology:DOID:0110727)", "pathway": " (R-DRE-114608); (R-DRE-2132295)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588723.3595434.1, SRR32588717.10990949.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On or before Jul 21, 2025 this sequence version replaced XP_005157210.1, NP_001071036.1., [RefSeq]; Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9QKM5", "ec_number_list": "3.4.22.41", "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity;GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005764 lysosome;GO:0012505 endomembrane system;GO:0070013 intracellular organelle lumen", "go_biological_process": "GO:0051603 proteolysis involved in protein catabolic process;GO:0002376 immune system process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RE14-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RE97-1", "uniprot_id": "F1RE97_DANRE", "mass": 49202.0, "length": 430, "protein_name": "Kinase", "gene_name": "ip6k1", "organism": "Zebrafish", "refseq_name": "inositol hexakisphosphate kinase 1", "refseq_ac": "XP_005161935", "gene_names_uniprotkb": "ip6k1", "gene_names_refseq": "ip6k1", "protein_names_uniprotkb": "Kinase; 2.7.-.-", "protein_names_refseq": "inositol hexakisphosphate kinase 1", "tax_id": 7955, "disease": "", "pathway": " (dre:564478); (R-DRE-1855167); (R-DRE-1855191)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TDF7;A0AC58IHV5", "ec_number_list": "2.7.-.-", "go_molecular_function": "GO:0000828 inositol hexakisphosphate kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0046854 phosphatidylinositol phosphate biosynthetic process;GO:0032958 inositol phosphate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RE97-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1REB6-1", "uniprot_id": "F1REB6_DANRE", "mass": 46645.0, "length": 428, "protein_name": "Purine nucleoside phosphorylase LACC1", "gene_name": "lacc1", "organism": "Zebrafish", "refseq_name": "purine nucleoside phosphorylase LACC1", "refseq_ac": "XP_001919421", "gene_names_uniprotkb": "lacc1", "gene_names_refseq": "lacc1", "protein_names_uniprotkb": "Purine nucleoside phosphorylase LACC1; 2.4.2.1; 2.4.2.28; 3.5.4.4; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Isocyanic acid synthase; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1", "protein_names_refseq": "purine nucleoside phosphorylase LACC1", "tax_id": 7955, "disease": "systemic juvenile rheumatoid arthritis (Disease Ontology:DOID:676)", "pathway": " (dre:100005054)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QH86", "ec_number_list": "3.5.4.4;2.4.2.1;2.4.2.28", "go_molecular_function": "GO:0016787 hydrolase activity;GO:0005507 copper ion binding;GO:0017061 S-methyl-5-thioadenosine phosphorylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005777 peroxisome;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0006954 inflammatory response;GO:0045087 innate immune response;GO:0031347 regulation of defense response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1REB6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1REN0-1", "uniprot_id": "F1REN0_DANRE", "mass": 91013.0, "length": 780, "protein_name": "Cullin-5", "gene_name": "cul5a", "organism": "Zebrafish", "refseq_name": "cullin-5a", "refseq_ac": "NP_001314988", "gene_names_uniprotkb": "cul5a; cul5; wu:fd17d09; wu:fi20h12; xx:11fd17d09; zgc:66185", "gene_names_refseq": "cul5a; cul5; wu:fd17d09; wu:fi20h12; xx:11fd17d09; zgc:66185", "protein_names_uniprotkb": "Cullin-5", "protein_names_refseq": "cullin 5; cullin-5a", "tax_id": 7955, "disease": "", "pathway": " (dre:327215); (R-DRE-8863795); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 4, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01000819.1, SRR26395015.1797001.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Jun 3, 2016 this sequence version replaced XP_005157469.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4A8", "ec_number_list": "", "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding;GO:0160072 ubiquitin ligase complex scaffold activity", "go_cellular_component": "GO:0005634 nucleus;GO:0019005 SCF ubiquitin ligase complex;GO:0031466 Cul5-RING ubiquitin ligase complex", "go_biological_process": "GO:0007165 signal transduction;GO:0016567 protein ubiquitination;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F1REN0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Z4R1-1", "uniprot_id": "F2Z4R1_DANRE", "mass": 7741.0, "length": 68, "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "sec61g", "organism": "Zebrafish", "refseq_name": "protein transport protein Sec61 subunit gamma", "refseq_ac": "NP_001002499", "gene_names_uniprotkb": "sec61g; zgc:92840", "gene_names_refseq": "sec61g; zgc:92840", "protein_names_uniprotkb": "Protein transport protein Sec61 subunit gamma", "protein_names_refseq": "SEC61 translocon gamma subunit; Sec61 gamma subunit; protein transport protein Sec61 subunit gamma", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": " (dre:436772); (R-DRE-9609523)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "14718378;16109975;17560942;27189481;28252024;28391457;35364135", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH565670.1, EH544545.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1, EH544545.1 and BI673343.1. On Nov 18, 2009 this sequence version replaced NP_001002499.1., [RefSeq]; Component of SEC61 channel-forming translocon complex that mediates transport of signal peptide-containing precursor polypeptides across the endoplasmic reticulum (ER). Forms a ribosome receptor and a gated pore in the ER membrane, both functions required for cotranslational translocation of nascent polypeptides. The SEC61 channel is also involved in ER membrane insertion of transmembrane proteins: it mediates membrane insertion of the first few transmembrane segments of proteins, while insertion of subsequent transmembrane regions of multi-pass membrane proteins is mediated by the multi-pass translocon (MPT) complex., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0M8", "ec_number_list": "", "go_molecular_function": "GO:0008320 protein transmembrane transporter activity", "go_cellular_component": "GO:0071261 Ssh1 translocon complex", "go_biological_process": "GO:0031204 post-translational protein targeting to membrane, translocation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F2Z4R1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Z4S2-1", "uniprot_id": "F2Z4S2_DANRE", "mass": 35907.0, "length": 319, "protein_name": "Trace amine associated receptor 14i", "gene_name": "taar14i", "organism": "Zebrafish", "refseq_name": "trace amine associated receptor 14i", "refseq_ac": "NP_001076506", "gene_names_uniprotkb": "taar14i; si:dkey-246e3.4; taar68", "gene_names_refseq": "si:dkey-246e3.4; taar14i; taar68", "protein_names_uniprotkb": "Trace amine associated receptor 14i", "protein_names_refseq": "putative neurotransmitter receptor protein; trace amine associated receptor 14i; trace amine associated receptor 68; zTA68", "tax_id": 7955, "disease": "", "pathway": " (dre:100034374)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "15804416;19237578;26108469", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: SRR32588718.40749349.1, SRR32588714.35171377.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDM2", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F2Z4S2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Z4S3-1", "uniprot_id": "F2Z4S3_DANRE", "mass": 46935.0, "length": 423, "protein_name": "Transcobalamin-2 isoform X1; Transcobalamin-2 precursor", "gene_name": "tcn2", "organism": "Zebrafish", "refseq_name": "transcobalamin-2 precursor", "refseq_ac": "NP_001116703", "gene_names_uniprotkb": "tcn2; si:ch211-102c2.6; tcn2l; wu:fd46e10", "gene_names_refseq": "si:ch211-102c2.6; tcn2l; tcn2; wu:fd46e10", "protein_names_uniprotkb": "Transcobalamin-2 isoform X1; Transcobalamin-2 precursor", "protein_names_refseq": "transcobalamin II, like; transcobalamin-2 precursor", "tax_id": 7955, "disease": "vitamin B12 deficiency (Disease Ontology:DOID:0050731); transcobalamin II deficiency (Disease Ontology:DOID:0050818); megaloblastic anemia (Disease Ontology:DOID:13382); Parkinson's disease (Disease Ontology:DOID:14330); cryoglobulinemia (Disease Ontology:DOID:2917); acute myeloid leukemia (Disease Ontology:DOID:9119); acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:407646); (R-DRE-6798695); (R-DRE-9758881); (R-DRE-9758890)", "pathway_count": 4, "publication_count": 5, "publication_id_list": "22532867;26469318;27189481;30237171;34132337", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003526.1, BC057247.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1, EH509290.1 and EH535398.1. On or before Apr 11, 2008 this sequence version replaced XP_001334768.1, XP_696401.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Loss of the Vitamin B-12 Transport Protein Tcn2 Results in Maternally Inherited Growth and Developmental Defects in Zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIB7;A0AC58JIB8", "ec_number_list": "", "go_molecular_function": "GO:0031419 cobalamin binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0015889 cobalamin transport;GO:0006824 cobalt ion transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F2Z4S3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Z4U5-1", "uniprot_id": "F2Z4U5_DANRE", "mass": 42317.0, "length": 381, "protein_name": "Cell cycle checkpoint control protein", "gene_name": "rad9a", "organism": "Zebrafish", "refseq_name": "cell cycle checkpoint control protein RAD9A", "refseq_ac": "NP_956501", "gene_names_uniprotkb": "rad9a; zgc:56197; zgc:85638", "gene_names_refseq": "rad9a; zgc:56197; zgc:85638", "protein_names_uniprotkb": "Cell cycle checkpoint control protein", "protein_names_refseq": "cell cycle checkpoint control protein RAD9A", "tax_id": 7955, "disease": "", "pathway": " (dre:393176); (R-DRE-176187); (R-DRE-5685938); (R-DRE-5693607); (R-DRE-6804756); (R-DRE-69473)", "pathway_count": 6, "publication_count": 5, "publication_id_list": "17251491;23515471;29321375;33476374;35929537", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045985.1, GFIL01046932.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Jun 25, 2025 this sequence version replaced NP_956501.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Component of the 9-1-1 cell-cycle checkpoint response complex that plays a major role in DNA repair. The 9-1-1 complex is recruited to DNA lesion upon damage by the RAD17-replication factor C (RFC) clamp loader complex. Acts then as a sliding clamp platform on DNA for several proteins involved in long-patch base excision repair (LP-BER). The 9-1-1 complex stimulates DNA polymerase beta (POLB) activity by increasing its affinity for the 3'-OH end of the primer-template and stabilizes POLB to those sites where LP-BER proceeds; endonuclease FEN1 cleavage activity on substrates with double, nick, or gap flaps of distinct sequences and lengths; and DNA ligase I (LIG1) on long-patch base excision repair substrates. The 9-1-1 complex is necessary for the recruitment of RHNO1 to sites of double-stranded breaks (DSB) occurring during the S phase. RAD9A possesses 3'->5' double stranded DNA exonuclease activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PCL5", "ec_number_list": "", "go_molecular_function": "GO:0008311 double-stranded DNA 3'-5' DNA exonuclease activity", "go_cellular_component": "GO:0030896 checkpoint clamp complex", "go_biological_process": "GO:0000076 DNA replication checkpoint signaling;GO:0006281 DNA repair;GO:0071479 cellular response to ionizing radiation;GO:0031573 mitotic intra-S DNA damage checkpoint signaling", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F2Z4U5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Z4W3-1", "uniprot_id": "F2Z4W3_DANRE", "mass": 58256.0, "length": 538, "protein_name": "Zinc finger and BTB domain-containing protein 2b", "gene_name": "zbtb2b", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 2b", "refseq_ac": "NP_998580", "gene_names_uniprotkb": "zbtb2b; CH73-109I14.4; fc05d08; fc26d04; wu:fc05d08; wu:fc26d04; zbtb2; zgc:56572", "gene_names_refseq": "CH73-109I14.4; fc05d08; fc26d04; wu:fc05d08; wu:fc26d04; zbtb2b; zbtb2; zgc:56572", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 2b", "protein_names_refseq": "zinc finger and BTB domain containing 2; zinc finger and BTB domain-containing protein 2b", "tax_id": 7955, "disease": "", "pathway": " (dre:406724)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PPY8", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0002682 regulation of immune system process;GO:0001817 regulation of cytokine production", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F2Z4W3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Z4W5-1", "uniprot_id": "F2Z4W5_DANRE", "mass": 35308.0, "length": 311, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "zgc:162608", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": "XP_005157555", "gene_names_uniprotkb": "zgc:162608; zgc:162608", "gene_names_refseq": "zgc:162608", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-381426); (R-DRE-8957275)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B3U0;A0AC58H9R9", "ec_number_list": "", "go_molecular_function": "GO:0005543 phospholipid binding;GO:0060228 phosphatidylcholine-sterol O-acyltransferase activator activity;GO:0120020 cholesterol transfer activity", "go_cellular_component": "GO:0034364 high-density lipoprotein particle;GO:0034361 very-low-density lipoprotein particle;GO:0042627 chylomicron;GO:0034362 low-density lipoprotein particle;GO:1903561 extracellular vesicle", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0033700 phospholipid efflux;GO:0033344 cholesterol efflux;GO:0055090 acylglycerol homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F2Z4W5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Z4X3-1", "uniprot_id": "F2Z4X3_DANRE", "mass": 88648.0, "length": 782, "protein_name": "Interleukin 17 receptor A1a precursor", "gene_name": "il17ra1a", "organism": "Zebrafish", "refseq_name": "interleukin 17 receptor A1a precursor", "refseq_ac": "NP_001093473", "gene_names_uniprotkb": "il17ra1a; il17ra; si:ch73-80e1.2", "gene_names_refseq": "il17ra1a; il17ra; si:ch73-80e1.2", "protein_names_uniprotkb": "Interleukin 17 receptor A1a precursor", "protein_names_refseq": "interleukin 17 receptor A1a precursor; interleukin 17A receptor", "tax_id": 7955, "disease": "immunodeficiency 51 (Disease Ontology:DOID:0111996)", "pathway": " (dre:561494)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;33446803;35266819", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01023467.1, GDQH01013312.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476738, SAMEA898403 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000004.1. On Jul 26, 2007 this sequence version replaced XP_689988.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDZ0", "ec_number_list": "", "go_molecular_function": "GO:0030368 interleukin-17 receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F2Z4X3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6N9E8-1", "uniprot_id": "F6N9E8_DANRE", "mass": 23020.0, "length": 212, "protein_name": "Insulin-like growth factor-binding protein 6", "gene_name": "igfbp6b", "organism": "Zebrafish", "refseq_name": "insulin-like growth factor-binding protein 6b precursor", "refseq_ac": "NP_001154874", "gene_names_uniprotkb": "igfbp6b", "gene_names_refseq": "igfbp6b", "protein_names_uniprotkb": "Insulin-like growth factor-binding protein 6", "protein_names_refseq": "insulin-like growth factor-binding protein 6b precursor", "tax_id": 7955, "disease": "leiomyoma (Disease Ontology:DOID:127); breast cancer (Disease Ontology:DOID:1612); in situ carcinoma (Disease Ontology:DOID:8719); neovascular inflammatory vitreoretinopathy (Disease Ontology:DOID:9719); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:100301946); (R-DRE-381426)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "19279291;20081093;21505050;21618524;21653807;30771614;31170402;35654889;36846912;39413646", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01013483.1, SRR32588726.46767491.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EU005246.1, JBMGRA010000023.1 and CK142114.1. On Sep 30, 2011 this sequence version replaced NP_001154874.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; IGF-binding proteins prolong the half-life of the IGFs and have been shown to either inhibit or stimulate the growth promoting effects of the IGFs on cell culture. They alter the interaction of IGFs with their cell surface receptors. Activates the MAPK signaling pathway and induces cell migration., [UniProtKB, UniProtKB]; Overexpression of zebrafish IGFBP-6a and IGFBP-6b caused a similar degree of reduction in body size and developmental rate., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRL3", "ec_number_list": "", "go_molecular_function": "GO:0001968 fibronectin binding;GO:0031994 insulin-like growth factor I binding;GO:0031995 insulin-like growth factor II binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0043567 regulation of insulin-like growth factor receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F6N9E8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NFN1-1", "uniprot_id": "F6NFN1_DANRE", "mass": 127007.0, "length": 1105, "protein_name": "Protein unc-13 homolog D", "gene_name": "unc13d", "organism": "Zebrafish", "refseq_name": "protein unc-13 homolog D", "refseq_ac": "XP_009305114", "gene_names_uniprotkb": "unc13d", "gene_names_refseq": "unc13d", "protein_names_uniprotkb": "Protein unc-13 homolog D", "protein_names_refseq": "protein unc-13 homolog D", "tax_id": 7955, "disease": "familial hemophagocytic lymphohistiocytosis 3 (Disease Ontology:DOID:0110923)", "pathway": " (R-DRE-6798695)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B4T4;A0AC58GYQ1;A0AC58GYQ4;A0AC58GYQ5;A0AC58GYQ6;A0AC58GYQ8;A0AC58GYR0;A0AC58GYR1;A0AC58GYR3;A0AC58GYR5;A0AC58GYR6;A0AC58GYR8;A0AC58GYS0;A0AC58GYS1;A0AC58GYS5;A0AC58GYS7;A0AC58GYS9;A0AC58GYT1;A0AC58GYT7;A0AC58GYT8;X1WBE2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0055037 recycling endosome;GO:0005770 late endosome;GO:0070382 exocytic vesicle", "go_biological_process": "GO:0006887 exocytosis;GO:0046903 secretion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F6NFN1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NGW9-1", "uniprot_id": "F6NGW9_DANRE", "mass": 59303.0, "length": 519, "protein_name": "Sorting nexin-8a", "gene_name": "snx8a", "organism": "Zebrafish", "refseq_name": "sorting nexin-8a", "refseq_ac": "NP_001313419", "gene_names_uniprotkb": "snx8a; cb1031; snx8", "gene_names_refseq": "cb1031; snx8a; snx8", "protein_names_uniprotkb": "Sorting nexin-8a", "protein_names_refseq": "sorting nexin 8; sorting nexin-8a", "tax_id": 7955, "disease": "", "pathway": " (dre:555448)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "22213104;23072875;26469318;31193955", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01039221.1, SRR26395013.889658.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476747, SAMEA4476788 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 25, 2025 this sequence version replaced NP_001313419.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P923", "ec_number_list": "", "go_molecular_function": "GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005829 cytosol;GO:0031901 early endosome membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0034498 early endosome to Golgi transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F6NGW9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NJC6-1", "uniprot_id": "F6NJC6_DANRE", "mass": 189575.0, "length": 1736, "protein_name": "Tubby-related protein 4", "gene_name": "tulp4a", "organism": "Zebrafish", "refseq_name": "tubby-related protein 4a isoform X1", "refseq_ac": "XP_005168569", "gene_names_uniprotkb": "tulp4a; fb99g11; si:ch211-222h17.4; si:ch211-51e12.5; tulp4; wu:fb75h04; wu:fb99g11", "gene_names_refseq": "fb99g11; si:ch211-222h17.4; si:ch211-51e12.5; tulp4a; tulp4; wu:fb75h04; wu:fb99g11", "protein_names_uniprotkb": "Tubby-related protein 4; Tubby superfamily protein; Tubby-like protein 4", "protein_names_refseq": "tubby-related protein 4a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:557730); (R-DRE-8951664)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "17640903;26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BFT7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F6NJC6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NKZ9-1", "uniprot_id": "F6NKZ9_DANRE", "mass": 30199.0, "length": 268, "protein_name": "Homeobox protein BarH-like 2", "gene_name": "barx2", "organism": "Zebrafish", "refseq_name": "homeobox protein BarH-like 2", "refseq_ac": "XP_001342044", "gene_names_uniprotkb": "barx2", "gene_names_refseq": "barx2", "protein_names_uniprotkb": "Homeobox protein BarH-like 2", "protein_names_refseq": "homeobox protein BarH-like 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100002200)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PZJ9", "ec_number_list": "", "go_molecular_function": "GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F6NKZ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NM08-1", "uniprot_id": "F6NM08_DANRE", "mass": 40898.0, "length": 361, "protein_name": "3.1.2.6; Probable hydrolase PNKD", "gene_name": "pnkd", "organism": "Zebrafish", "refseq_name": "probable hydrolase PNKD", "refseq_ac": "NP_001243139", "gene_names_uniprotkb": "pnkd; im:7147352", "gene_names_refseq": "im:7147352; pnkd", "protein_names_uniprotkb": "3.1.2.6; Probable hydrolase PNKD", "protein_names_refseq": "PNKD, MBL domain containing; myofibrillogenesis regulator 1; paroxysmal nonkinesigenic dyskinesia; probable hydrolase PNKD", "tax_id": 7955, "disease": "paroxysmal nonkinesigenic dyskinesia 1 (Disease Ontology:DOID:0090049)", "pathway": " (dre:497562)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01015199.1, BC129446.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Jan 14, 2012 this sequence version replaced XP_001923240.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2H3", "ec_number_list": "", "go_molecular_function": "GO:0004416 hydroxyacylglutathione hydrolase activity;GO:0046872 metal ion binding;GO:0016790 thiolester hydrolase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F6NM08-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NN15-1", "uniprot_id": "F6NN15_DANRE", "mass": 152530.0, "length": 1384, "protein_name": "3.4.19.12; LIM domain only protein 7b", "gene_name": "lmo7b", "organism": "Zebrafish", "refseq_name": "LIM domain only protein 7b isoform 1", "refseq_ac": "NP_001038909", "gene_names_uniprotkb": "lmo7b; DKEY-180K21.1; lmo7; zgc:152922", "gene_names_refseq": "DKEY-180K21.1; lmo7b; lmo7; zgc:152922", "protein_names_uniprotkb": "3.4.19.12; LIM domain only protein 7b", "protein_names_refseq": "LIM domain only 7b; LIM domain only 7; LIM domain only protein 7b isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:558333); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 3, "publication_count": 6, "publication_id_list": "15520368;18065431;18335061;19035355;26469318;34884689", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 25, 2025 this sequence version replaced NP_001038909.2. Sequence Note:., [RefSeq]; Reveal the temporal and spatial expression patterns of this important gene during mouse, chicken and fish development and our findings suggest essential functions for LMO7 during vertebrate heart development, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAP0", "ec_number_list": "2.3.2.-;2.3.2.27;3.6.4.-;2.3.2.34;2.3.2.26;6.2.1.45;2.3.2.31;2.3.2.23;3.4.19.12;2.3.2.25;3.4.-.-", "go_molecular_function": "GO:0046872 metal ion binding;GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "", "go_biological_process": "GO:0007507 heart development;GO:0030155 regulation of cell adhesion;GO:0001947 heart looping;GO:0023051 regulation of signaling", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F6NN15-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NP87-1", "uniprot_id": "F6NP87_DANRE", "mass": 42903.0, "length": 380, "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial", "gene_name": "ndufa9a", "organism": "Zebrafish", "refseq_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial", "refseq_ac": "NP_001013477", "gene_names_uniprotkb": "ndufa9a; ndufa9; wu:fc41f12; zgc:112513", "gene_names_refseq": "ndufa9a; ndufa9; wu:fc41f12; zgc:112513", "protein_names_uniprotkb": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial; Complex I-39kD; NADH-ubiquinone oxidoreductase 39 kDa subunit", "protein_names_refseq": "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9a; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial", "tax_id": 7955, "disease": "nuclear type mitochondrial complex I deficiency 26 (Disease Ontology:DOID:0112086)", "pathway": " (dre:541331); (R-DRE-611105); (R-DRE-6799198)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "15376328;15994372;24942242;26469318;26854857;28252024;35565942;36317480;38032938;38788853", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC153422.1, BC152139.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC153422.1 and DV588298.1. On or before Jun 25, 2015 this sequence version replaced XP_005174380.1, NP_001013477.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UY68", "ec_number_list": "", "go_molecular_function": "GO:0044877 protein-containing complex binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0001666 response to hypoxia;GO:0006744 ubiquinone biosynthetic process;GO:0022904 respiratory electron transport chain", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F6NP87-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NQ58-1", "uniprot_id": "F6NQ58_DANRE", "mass": 50951.0, "length": 457, "protein_name": "Alpha-2-antiplasmin isoform X1", "gene_name": "serpinf2a", "organism": "Zebrafish", "refseq_name": "alpha-2-antiplasmin isoform X1", "refseq_ac": "XP_688797", "gene_names_uniprotkb": "serpinf2a", "gene_names_refseq": "serpinf2a", "protein_names_uniprotkb": "Alpha-2-antiplasmin isoform X1", "protein_names_refseq": "alpha-2-antiplasmin isoform X1", "tax_id": 7955, "disease": "alpha-2-plasmin inhibitor deficiency (Disease Ontology:DOID:0060601); COVID-19 (Disease Ontology:DOID:0080600); pre-eclampsia (Disease Ontology:DOID:10591); hypertension (Disease Ontology:DOID:10763); coronary artery disease (Disease Ontology:DOID:3393); systemic scleroderma (Disease Ontology:DOID:418)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T5R7", "ec_number_list": "", "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0050820 positive regulation of coagulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F6NQ58-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NSX9-1", "uniprot_id": "Z687B_DANRE", "mass": 152503.0, "length": 1431, "protein_name": "Zinc finger protein 687b", "gene_name": "znf687b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "znf687b; si:dkey-204a24.9", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger protein 687b", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-9940951)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;26849110", "class_list": "", "function": "May be involved in transcriptional regulation., [UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F6NSX9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NTK8-1", "uniprot_id": "F6NTK8_DANRE", "mass": 37232.0, "length": 341, "protein_name": "Forkhead box protein G1", "gene_name": "foxg1b", "organism": "Zebrafish", "refseq_name": "forkhead box protein G1b", "refseq_ac": "NP_998079", "gene_names_uniprotkb": "foxg1b; zgc:85969", "gene_names_refseq": "foxg1b; zgc:85969", "protein_names_uniprotkb": "Forkhead box protein G1", "protein_names_refseq": "forkhead box protein G1b", "tax_id": 7955, "disease": "", "pathway": " (dre:405850)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "19379839;22210625;23598338;25937343;26469318;30929901;31917260;33068532;33944782", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC067725.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC067725.1. On Sep 30, 2011 this sequence version replaced NP_998079.1. Sequence Note: This RefSeq record was created from a transcript of a different strain than the reference genome strain because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PIB6", "ec_number_list": "", "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:1990837 sequence-specific double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F6NTK8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NU44-1", "uniprot_id": "F6NU44_DANRE", "mass": 88582.0, "length": 773, "protein_name": "EF-hand calcium-binding domain-containing protein 4B", "gene_name": "cracr2ab", "organism": "Zebrafish", "refseq_name": "EF-hand calcium-binding domain-containing protein 4B", "refseq_ac": "XP_009298523", "gene_names_uniprotkb": "cracr2ab", "gene_names_refseq": "cracr2ab", "protein_names_uniprotkb": "EF-hand calcium-binding domain-containing protein 4B", "protein_names_refseq": "EF-hand calcium-binding domain-containing protein 4B", "tax_id": 7955, "disease": "", "pathway": " (dre:564347); (R-DRE-6798695); (R-DRE-8873719)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ARL2;A0AC58J9L2", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0005509 calcium ion binding", "go_cellular_component": "", "go_biological_process": "GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F6NU44-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NUK2-1", "uniprot_id": "F6NUK2_DANRE", "mass": 37404.0, "length": 336, "protein_name": "Serine/threonine-protein kinase SBK1", "gene_name": "si:ch211-171h4.3", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase SBK1", "refseq_ac": "XP_695320", "gene_names_uniprotkb": "si:ch211-171h4.3", "gene_names_refseq": "si:ch211-171h4.3", "protein_names_uniprotkb": "Serine/threonine-protein kinase SBK1", "protein_names_refseq": "serine/threonine-protein kinase SBK1", "tax_id": 7955, "disease": "", "pathway": " (dre:566942)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_695320.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7Y2", "ec_number_list": "", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004708 MAP kinase kinase activity", "go_cellular_component": "", "go_biological_process": "GO:0000165 MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F6NUK2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NVK8-1", "uniprot_id": "F6NVK8_DANRE", "mass": 89883.0, "length": 774, "protein_name": "Cullin-3a", "gene_name": "cul3a", "organism": "Zebrafish", "refseq_name": "cullin-3a", "refseq_ac": "NP_955985", "gene_names_uniprotkb": "cul3a; cul3; wu:fc37e01", "gene_names_refseq": "cul3a; cul3; wu:fc37e01", "protein_names_uniprotkb": "Cullin-3a", "protein_names_refseq": "cullin 3; cullin-3a", "tax_id": 7955, "disease": "neurodevelopmental disorder with or without autism or seizures (Disease Ontology:DOID:0061147); pseudohypoaldosteronism (Disease Ontology:DOID:4479)", "pathway": " (dre:324655)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "19874812;26469318;28252024;32368696;34829928;36933215", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065357.1, AY423034.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Jan 30, 2016 this sequence version replaced NP_955985.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PBQ9", "ec_number_list": "", "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding;GO:0160072 ubiquitin ligase complex scaffold activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0031463 Cul3-RING ubiquitin ligase complex", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0007165 signal transduction;GO:0007507 heart development;GO:0051301 cell division;GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F6NVK8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NVZ1-1", "uniprot_id": "F6NVZ1_DANRE", "mass": 8276.0, "length": 96, "protein_name": "Interferon alpha inducible protein 27.2", "gene_name": "ifi27.2", "organism": "Zebrafish", "refseq_name": "interferon alpha inducible protein 27.2 precursor", "refseq_ac": "NP_001007134", "gene_names_uniprotkb": "ifi27.2; ifi27; isg12-2; isg12.1; isg12.2; zgc:123067; zgc:152791; zgc:158560", "gene_names_refseq": "ifi27.2; ifi27; isg12-2; isg12.1; isg12.2; zgc:123067; zgc:152791; zgc:158560", "protein_names_uniprotkb": "Interferon alpha inducible protein 27.2", "protein_names_refseq": "interferon alpha inducible protein 27.2 precursor; interferon stimulated gene 12", "tax_id": 7955, "disease": "", "pathway": " (dre:641326); (R-DRE-9909505)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "14728724;19200601;21354627;24683187;26469318;27409813;29216900;30484769;31732531;33203921", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EB984692.1, BC129292.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA4476756 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB984692.1 and DY573454.1. On Jul 26, 2008 this sequence version replaced NP_001007134.1. Transcript Variant: This variant (2) differs in the 3' UTR compared to variant 1. Variants 1 and 2 encode the same protein. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1C3", "ec_number_list": "", "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0097193 intrinsic apoptotic signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F6NVZ1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NXG0-1", "uniprot_id": "F6NXG0_DANRE", "mass": 169101.0, "length": 1572, "protein_name": "AT-rich interactive domain-containing protein 2 isoform X1", "gene_name": "arid2", "organism": "Zebrafish", "refseq_name": "AT-rich interactive domain-containing protein 2 isoform X1", "refseq_ac": "XP_005164514", "gene_names_uniprotkb": "arid2; fi45a01; si:ch211-132p20.1; wu:fi45a01; zgc:152901", "gene_names_refseq": "arid2; fi45a01; si:ch211-132p20.1; wu:fi45a01; zgc:152901", "protein_names_uniprotkb": "AT-rich interactive domain-containing protein 2 isoform X1", "protein_names_refseq": "AT-rich interactive domain-containing protein 2 isoform X1", "tax_id": 7955, "disease": "oral squamous cell carcinoma (Disease Ontology:DOID:0050866); Coffin-Siris syndrome 6 (Disease Ontology:DOID:0080297); hepatocellular carcinoma (Disease Ontology:DOID:684); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BBU2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0035060 brahma complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F6NXG0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NXI2-1", "uniprot_id": "F6NXI2_DANRE", "mass": 55037.0, "length": 485, "protein_name": "Ectonucleotide pyrophosphatase/phosphodiesterase family member 7.1 precursor", "gene_name": "enpp7.1", "organism": "Zebrafish", "refseq_name": "ectonucleotide pyrophosphatase/phosphodiesterase family member 7.1 precursor", "refseq_ac": "NP_001243734", "gene_names_uniprotkb": "enpp7.1; enpp7; si:busm1-64d20.3", "gene_names_refseq": "enpp7.1; enpp7; si:busm1-64d20.3", "protein_names_uniprotkb": "Ectonucleotide pyrophosphatase/phosphodiesterase family member 7.1 precursor", "protein_names_refseq": "ectonucleotide pyrophosphatase/phosphodiesterase 7-like; ectonucleotide pyrophosphatase/phosphodiesterase family member 7.1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:557756); (R-DRE-9840310)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "19598106;21195142;28502661;31723061;39036955", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124465.1, BC114325.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC124465.1. On Feb 26, 2012 this sequence version replaced XP_001924039.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2P5", "ec_number_list": "", "go_molecular_function": "GO:0008081 phosphoric diester hydrolase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F6NXI2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NZ76-1", "uniprot_id": "F6NZ76_DANRE", "mass": 5985.0, "length": 51, "protein_name": "Mitochondrial import receptor subunit TOM5 homolog", "gene_name": "tomm5", "organism": "Zebrafish", "refseq_name": "mitochondrial import receptor subunit TOM5 homolog", "refseq_ac": "NP_001159587", "gene_names_uniprotkb": "tomm5; si:ch211-240l14.2; si:dkey-109l4.4; zC240L14.2", "gene_names_refseq": "si:ch211-240l14.2; si:dkey-109l4.4; tomm5; zC240L14.2", "protein_names_uniprotkb": "Mitochondrial import receptor subunit TOM5 homolog", "protein_names_refseq": "mitochondrial import receptor subunit TOM5 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:497181); (R-DRE-5205685)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;30354240", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH448399.1, DN894306.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1 and EH448399.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSG2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005742 mitochondrial outer membrane translocase complex", "go_biological_process": "GO:0015031 protein transport;GO:0006626 protein targeting to mitochondrion", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F6NZ76-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6NZK1-1", "uniprot_id": "F6NZK1_DANRE", "mass": 44622.0, "length": 394, "protein_name": "Interferon gamma receptor 1 precursor", "gene_name": "ifngr1", "organism": "Zebrafish", "refseq_name": "interferon gamma receptor 1 precursor", "refseq_ac": "NP_001129451", "gene_names_uniprotkb": "ifngr1; IFNGR1-2; crfb17; ifngr1-1; zgc:194858; zgc:194873", "gene_names_refseq": "IFNGR1-2; crfb17; ifngr1-1; ifngr1; zgc:194858; zgc:194873", "protein_names_uniprotkb": "Interferon gamma receptor 1 precursor", "protein_names_refseq": "cytokine receptor family member B17; interferon gamma receptor 1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:571368); (R-DRE-6783783); (R-DRE-877300); (R-DRE-877312); (R-DRE-8854691); (R-DRE-909733); (R-DRE-912694); (R-DRE-9732724)", "pathway_count": 8, "publication_count": 10, "publication_id_list": "19577303;21048110;21319190;23448251;24990885;33914736;33991914;35194032;36298859;37146740", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GQ901865.1, EH445059.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA3505383 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC163417.1 and EH459252.1. On Oct 8, 2010 this sequence version replaced NP_001129451.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; The receptor complex for Ifn-gamma2 includes cytokine receptor family B (Crfb)6 together with Crfb13 and Crfb17. Erratum:[J Immunol. 2012 Feb 15;188(4):2038], [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NLT1", "ec_number_list": "", "go_molecular_function": "GO:0004896 cytokine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0030097 hemopoiesis;GO:0019221 cytokine-mediated signaling pathway;GO:0098508 endothelial to hematopoietic transition", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F6NZK1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6P2R4-1", "uniprot_id": "F6P2R4_DANRE", "mass": 46453.0, "length": 431, "protein_name": "2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial", "gene_name": "gcat", "organism": "Zebrafish", "refseq_name": "2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial", "refseq_ac": "NP_001166025", "gene_names_uniprotkb": "gcat", "gene_names_refseq": "gcat", "protein_names_uniprotkb": "2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; 2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase", "protein_names_refseq": "2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:402822)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "22228713;24722243;26469318;27189481;28252024;35365809", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC067644.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB906064.1, BC067644.1 and EH467192.1. On Apr 26, 2010 this sequence version replaced XP_701260.4., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NT19", "ec_number_list": "2.3.1.29", "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0016874 ligase activity;GO:0008890 glycine C-acetyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006567 L-threonine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F6P2R4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6P4J7-1", "uniprot_id": "F6P4J7_DANRE", "mass": 59057.0, "length": 505, "protein_name": "Zinc finger-like gene 1b", "gene_name": "znfl1b", "organism": "Zebrafish", "refseq_name": "zinc finger-like gene 1b", "refseq_ac": "NP_001107105", "gene_names_uniprotkb": "znfl1b; si:dkey-103d23.5; znfl1d; znfl1", "gene_names_refseq": "si:dkey-103d23.5; znfl1b; znfl1d; znfl1", "protein_names_uniprotkb": "Zinc finger-like gene 1b", "protein_names_refseq": "zinc finger-like gene 1b; zinc finger-like gene 1", "tax_id": 7955, "disease": "", "pathway": " (dre:795031)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "28623229;30472261", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395013.222190.1, SRR26395015.2013616.1 [ECO:0000332] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Dec 5, 2025 this sequence version replaced NP_001107105.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFU5", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "GO:0030902 hindbrain development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F6P4J7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6P528-1", "uniprot_id": "F6P528_DANRE", "mass": 61846.0, "length": 553, "protein_name": "Transmembrane protein 209", "gene_name": "tmem209", "organism": "Zebrafish", "refseq_name": "transmembrane protein 209", "refseq_ac": "NP_001257902", "gene_names_uniprotkb": "tmem209; fc20f10; fe36f06; im:6909884; si:ch211-240j22.1; wu:fc20f10; wu:fe36f06", "gene_names_refseq": "fc20f10; fe36f06; im:6909884; si:ch211-240j22.1; tmem209; wu:fc20f10; wu:fe36f06", "protein_names_uniprotkb": "Transmembrane protein 209", "protein_names_refseq": "transmembrane protein 209", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "16109975;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01003891.1, GDQH01011380.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505380 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Aug 18, 2012 this sequence version replaced XP_682843.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZT5;A0AC58J6S1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F6P528-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6P784-1", "uniprot_id": "F6P784_DANRE", "mass": 12027.0, "length": 107, "protein_name": "C-C motif chemokine 19a.2 precursor", "gene_name": "ccl19a.2", "organism": "Zebrafish", "refseq_name": "C-C motif chemokine 19a.2 precursor", "refseq_ac": "NP_001129720", "gene_names_uniprotkb": "ccl19a.2; zgc:194112; zgc:194121", "gene_names_refseq": "ccl19a.2; zgc:194112; zgc:194121", "protein_names_uniprotkb": "C-C motif chemokine 19a.2 precursor", "protein_names_refseq": "C-C motif chemokine 19-like; C-C motif chemokine 19a.2 precursor; CCL-chr5b; CCL19ab; DrUn_WGA13047_1_39000; WGA710_1_710182", "tax_id": 7955, "disease": "pulmonary sarcoidosis (Disease Ontology:DOID:13406); asthma (Disease Ontology:DOID:2841); pulmonary fibrosis (Disease Ontology:DOID:3770)", "pathway": " (dre:100192211)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "16697551;18482437;23145839;29760055;30797066;37489330", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH469053.1, GFIL01046776.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Jun 25, 2025 this sequence version replaced NP_001129720.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NLM1", "ec_number_list": "", "go_molecular_function": "GO:0008009 chemokine activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006954 inflammatory response;GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F6P784-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6P873-1", "uniprot_id": "F6P873_DANRE", "mass": 10281.0, "length": 89, "protein_name": "3.6.1.14; ATP synthase subunit f, mitochondrial", "gene_name": "atp5mf", "organism": "Zebrafish", "refseq_name": "ATP synthase F(0) complex subunit f, mitochondrial", "refseq_ac": "NP_001290058", "gene_names_uniprotkb": "atp5mf; atp5j2; im:7148816; si:ch211-194i10.5", "gene_names_refseq": "atp5j2; atp5mf; im:7148816; si:ch211-194i10.5", "protein_names_uniprotkb": "3.6.1.14; ATP synthase subunit f, mitochondrial", "protein_names_refseq": "ATP synthase F(0) complex subunit f, mitochondrial; ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2; ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2", "tax_id": 7955, "disease": "", "pathway": " (dre:402883); (R-DRE-163210); (R-DRE-8949613)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;37240290", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH608470.1, EH576983.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH555881.1, EH440598.1, EH608470.1, JBMGRA010000003.1 and EH605747.1. On Dec 18, 2014 this sequence version replaced XP_685374.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1Q0", "ec_number_list": "3.6.1.14", "go_molecular_function": "GO:0047624 adenosine-tetraphosphatase activity", "go_cellular_component": "GO:0031966 mitochondrial membrane;GO:0045259 proton-transporting ATP synthase complex", "go_biological_process": "GO:0042776 proton motive force-driven mitochondrial ATP synthesis;GO:1902600 proton transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F6P873-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6PAL8-1", "uniprot_id": "F6PAL8_DANRE", "mass": 55135.0, "length": 484, "protein_name": "Uncharacterized protein LOC557817 precursor", "gene_name": "enpp7.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC557817 precursor", "refseq_ac": "NP_001314969", "gene_names_uniprotkb": "enpp7.2; dZ64D20.2; si:busm1-64d20.2; si:dkey-33g13.2", "gene_names_refseq": "dZ64D20.2; enpp7.2; si:busm1-64d20.2; si:dkey-33g13.2", "protein_names_uniprotkb": "Uncharacterized protein LOC557817 precursor", "protein_names_refseq": "uncharacterized protein LOC557817 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:557817)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "28502661", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154658.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN06350654, SAMN18715704 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH503509.1, BC154658.1 and EH529707.1. On Jun 3, 2016 this sequence version replaced XP_001923857.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8P8", "ec_number_list": "", "go_molecular_function": "GO:0008081 phosphoric diester hydrolase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "F6PAL8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6PBL6-1", "uniprot_id": "F6PBL6_DANRE", "mass": 29310.0, "length": 268, "protein_name": "COP9 signalosome complex subunit 7a", "gene_name": "cops7a", "organism": "Zebrafish", "refseq_name": "COP9 signalosome complex subunit 7a", "refseq_ac": "NP_001292525", "gene_names_uniprotkb": "cops7a; wu:fa19h06; wu:fa94b04", "gene_names_refseq": "cops7a; wu:fa19h06; wu:fa94b04", "protein_names_uniprotkb": "COP9 signalosome complex subunit 7a", "protein_names_refseq": "COP9 signalosome complex subunit 7a", "tax_id": 7955, "disease": "", "pathway": " (dre:336736); (R-DRE-5696394); (R-DRE-6781823); (R-DRE-8856825); (R-DRE-8951664)", "pathway_count": 5, "publication_count": 2, "publication_id_list": "28252024;30863400", "class_list": "", "function": "Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, JUN, I-kappa-B-alpha/NFKBIA, ITPK1 and IRF8/ICSBP, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1C6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0010387 COP9 signalosome assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F6PBL6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6PCI4-1", "uniprot_id": "F6PCI4_DANRE", "mass": 28106.0, "length": 253, "protein_name": "Transmembrane ascorbate-dependent reductase CYB561", "gene_name": "cyb561", "organism": "Zebrafish", "refseq_name": "transmembrane ascorbate-dependent reductase CYB561", "refseq_ac": "NP_001122216", "gene_names_uniprotkb": "cyb561; zgc:193680; zgc:193701", "gene_names_refseq": "cyb561; zgc:193680; zgc:193701", "protein_names_uniprotkb": "Transmembrane ascorbate-dependent reductase CYB561; Cytochrome b-561; Cytochrome b561", "protein_names_refseq": "cytochrome b-561; transmembrane ascorbate-dependent reductase CYB561", "tax_id": 7955, "disease": "", "pathway": " (dre:568765)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC162177.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC162177.1. On Oct 6, 2011 this sequence version replaced NP_001122216.1. Sequence Note: This RefSeq record was created from a transcript of a different strain than the reference genome strain because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ43", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0016491 oxidoreductase activity;GO:0140571 transmembrane ascorbate ferrireductase activity", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0042584 chromaffin granule membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F6PCI4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F6PDK1-1", "uniprot_id": "F6PDK1_DANRE", "mass": 76728.0, "length": 681, "protein_name": "Gametogenetin-binding protein 2", "gene_name": "ggnbp2", "organism": "Zebrafish", "refseq_name": "gametogenetin-binding protein 2", "refseq_ac": "NP_001073430", "gene_names_uniprotkb": "ggnbp2; im:6901326; zgc:152713", "gene_names_refseq": "ggnbp2; im:6901326; zgc:152713", "protein_names_uniprotkb": "Gametogenetin-binding protein 2; Protein ZNF403", "protein_names_refseq": "gametogenetin-binding protein 2; zinc finger protein 403", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.28916149.1, SRR32588728.17691912.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1, BC116532.1 and DT872739.1. On or before Sep 1, 2015 this sequence version replaced XP_005165072.1, NP_001073430.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]; May be involved in spermatogenesis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCD3;A0AC58JJ13", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F6PDK1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W266-1", "uniprot_id": "F8W266_DANRE", "mass": 23433.0, "length": 209, "protein_name": "Apoptosis regulator Bcl-2", "gene_name": "bcl2b", "organism": "Zebrafish", "refseq_name": "apoptosis regulator Bcl-2", "refseq_ac": "XP_001341214", "gene_names_uniprotkb": "bcl2b", "gene_names_refseq": "bcl2b", "protein_names_uniprotkb": "Apoptosis regulator Bcl-2", "protein_names_refseq": "apoptosis regulator Bcl-2", "tax_id": 7955, "disease": "tongue squamous cell carcinoma (Disease Ontology:DOID:0050865); follicular lymphoma (Disease Ontology:DOID:0050873); ductal carcinoma in situ (Disease Ontology:DOID:0060074); oligomeganephronia (Disease Ontology:DOID:0111142); prostate cancer (Disease Ontology:DOID:10283); stomach cancer (Disease Ontology:DOID:10534); Alzheimer's disease (Disease Ontology:DOID:10652); intracranial aneurysm (Disease Ontology:DOID:10941); urinary bladder cancer (Disease Ontology:DOID:11054); hypertrophic cardiomyopathy (Disease Ontology:DOID:11984); leiomyoma (Disease Ontology:DOID:127); melanoma (Disease Ontology:DOID:1909); colon adenocarcinoma (Disease Ontology:DOID:234); transitional cell carcinoma (Disease Ontology:DOID:2671); endometriosis (Disease Ontology:DOID:289); plasmacytoma (Disease Ontology:DOID:3721); renal cell carcinoma (Disease Ontology:DOID:4450); esophagus adenocarcinoma (Disease Ontology:DOID:4914); lung small cell carcinoma (Disease Ontology:DOID:5409); osteoarthritis (Disease Ontology:DOID:8398); retinal degeneration (Disease Ontology:DOID:8466); cervix uteri carcinoma in situ (Disease Ontology:DOID:8991); acute myeloid leukemia (Disease Ontology:DOID:9119); nasopharynx carcinoma (Disease Ontology:DOID:9261); acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:100007048); (R-DRE-111447); (R-DRE-111453); (R-DRE-844455)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 25, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q7L4", "ec_number_list": "", "go_molecular_function": "GO:0015267 channel activity", "go_cellular_component": "GO:0005741 mitochondrial outer membrane;GO:0031965 nuclear membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0043065 positive regulation of apoptotic process;GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage;GO:0001836 release of cytochrome c from mitochondria;GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W266-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W2D1-1", "uniprot_id": "F8W2D1_DANRE", "mass": 50592.0, "length": 450, "protein_name": "peptidylprolyl isomerase", "gene_name": "fkbp4", "organism": "Zebrafish", "refseq_name": "peptidyl-prolyl cis-trans isomerase FKBP4 isoform X1", "refseq_ac": "XP_005173673", "gene_names_uniprotkb": "fkbp4; wu:fb34f09", "gene_names_refseq": "fkbp4; wu:fb34f09", "protein_names_uniprotkb": "peptidylprolyl isomerase; 5.2.1.8", "protein_names_refseq": "peptidyl-prolyl cis-trans isomerase FKBP4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-3371497); (R-DRE-3371568); (R-DRE-8939211); (R-DRE-9018519)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BKV5", "ec_number_list": "5.2.1.8;3.1.3.16", "go_molecular_function": "GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006457 protein folding;GO:1901096 regulation of autophagosome maturation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W2D1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W2F5-1", "uniprot_id": "F8W2F5_DANRE", "mass": 50137.0, "length": 448, "protein_name": "Uncharacterized protein isoform X2", "gene_name": "si:dkey-22i16.9", "organism": "Zebrafish", "refseq_name": "si:dkey-22i16.9", "refseq_ac": "NP_001429413", "gene_names_uniprotkb": "si:dkey-22i16.9; odam; si:dkey-22i16.8", "gene_names_refseq": "si:dkey-22i16.9", "protein_names_uniprotkb": "Uncharacterized protein isoform X2", "protein_names_refseq": "si:dkey-22i16.9", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RLL3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007166 cell surface receptor signaling pathway;GO:0031295 T cell costimulation;GO:0042130 negative regulation of T cell proliferation;GO:0071222 cellular response to lipopolysaccharide", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W2F5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W2P1-1", "uniprot_id": "F8W2P1_DANRE", "mass": 21428.0, "length": 186, "protein_name": "ADP-ribosylation factor-like protein 8A", "gene_name": "arl8a", "organism": "Zebrafish", "refseq_name": "ADP-ribosylation factor-like protein 8A", "refseq_ac": "NP_001186949", "gene_names_uniprotkb": "arl8a; fe25e11; si:ch1073-204j4.2; wu:fe25e11", "gene_names_refseq": "arl8a; fe25e11; si:ch1073-204j4.2; wu:fe25e11", "protein_names_uniprotkb": "ADP-ribosylation factor-like protein 8A", "protein_names_refseq": "ADP-ribosylation factor-like protein 8A", "tax_id": 7955, "disease": "", "pathway": " (dre:567222); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003451.1, BC056568.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1, EH500770.1 and CT693669.2. On Jan 12, 2011 this sequence version replaced XP_002666403.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NXH5", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:1904115 axon cytoplasm", "go_biological_process": "GO:0015031 protein transport;GO:0051301 cell division;GO:0008089 anterograde axonal transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F8W2P1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W3H2-1", "uniprot_id": "F8W3H2_DANRE", "mass": 5709.0, "length": 51, "protein_name": "ATP synthase subunit epsilon, mitochondrial", "gene_name": "atp5f1e", "organism": "Zebrafish", "refseq_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "refseq_ac": "NP_001289671", "gene_names_uniprotkb": "atp5f1e; atp5e; si:ch211-122i22.5", "gene_names_refseq": "atp5e; atp5f1e; si:ch211-122i22.5", "protein_names_uniprotkb": "ATP synthase subunit epsilon, mitochondrial", "protein_names_refseq": "ATP synthase F(1) complex subunit epsilon, mitochondrial; ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit", "tax_id": 7955, "disease": "mitochondrial complex V (ATP synthase) deficiency nuclear type 3 (Disease Ontology:DOID:0060332)", "pathway": " (dre:798291); (R-DRE-163210); (R-DRE-8949613)", "pathway_count": 3, "publication_count": 7, "publication_id_list": "20828405;26469318;26854857;28252024;28544213;35893052;36794678", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CN511464.1, EH536860.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1, EH548062.1 and EH536860.1. On Nov 11, 2014 this sequence version replaced XP_003198878.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1M4", "ec_number_list": "", "go_molecular_function": "GO:0046933 proton-transporting ATP synthase activity, rotational mechanism", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0045259 proton-transporting ATP synthase complex", "go_biological_process": "GO:0042776 proton motive force-driven mitochondrial ATP synthesis", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F8W3H2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W3I2-1", "uniprot_id": "F8W3I2_DANRE", "mass": 27682.0, "length": 248, "protein_name": "Nuclear receptor subfamily 0 group B member 2", "gene_name": "nr0b2a", "organism": "Zebrafish", "refseq_name": "nuclear receptor subfamily 0 group B member 2a", "refseq_ac": "NP_001243120", "gene_names_uniprotkb": "nr0b2a; NR0B2-A; Nr0b2; SHP-A; gb:bc058069", "gene_names_refseq": "NR0B2-A; Nr0b2; SHP-A; gb:bc058069; nr0b2a", "protein_names_uniprotkb": "Nuclear receptor subfamily 0 group B member 2; Orphan nuclear receptor SHP; Small heterodimer partner", "protein_names_refseq": "nuclear receptor subfamily 0 group B member 2a", "tax_id": 7955, "disease": "type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:403010); (R-DRE-383280)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "17997606;18230668;23625115;25711679;26024593;27189481;32064346;32673875;33285186;35686059", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC058069.1, EH591377.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC058069.1. On Jan 12, 2012 this sequence version replaced XP_001921455.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Transcriptional regulator that acts as a negative regulator of receptor-dependent signaling pathways. Specifically inhibits transactivation of the nuclear receptor with which it interacts. Inhibits transcriptional activity of NEUROD1 on E-box-containing promoter by interfering with the coactivation function of the p300/CBP-mediated transcription complex for NEUROD1. Essential component of the liver circadian clock which via its interaction with NR1D1 and RORG regulates NPAS2-mediated hepatic lipid metabolism. Regulates the circadian expression of cytochrome P450 (CYP) enzymes. Represses: NR5A2 and HNF4A to down-regulate CYP2C38, NFLI3 to up-regulate CYP2A5, BHLHE41/HNF1A axis to up-regulate CYP1A2, CYP2E1 and CYP3A11, and NR1D1 to up-regulate CYP2B10, CYP4A10 and CYP4A14., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4B4", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003714 transcription corepressor activity;GO:0016922 nuclear receptor binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0032922 circadian regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F8W3I2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W3Q0-1", "uniprot_id": "F8W3Q0_DANRE", "mass": 34082.0, "length": 299, "protein_name": "Asialoglycoprotein receptor 1", "gene_name": "asgr1a", "organism": "Zebrafish", "refseq_name": "asialoglycoprotein receptor 1", "refseq_ac": "XP_005170656", "gene_names_uniprotkb": "asgr1a", "gene_names_refseq": "asgr1a", "protein_names_uniprotkb": "Asialoglycoprotein receptor 1", "protein_names_refseq": "asialoglycoprotein receptor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882127); (R-DRE-446203); (R-DRE-5621480)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BHX3", "ec_number_list": "", "go_molecular_function": "GO:0030246 carbohydrate binding;GO:0038187 pattern recognition receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W3Q0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W428-1", "uniprot_id": "F8W428_DANRE", "mass": 99426.0, "length": 864, "protein_name": "Cullin-4B", "gene_name": "cul4b", "organism": "Zebrafish", "refseq_name": "cullin-4B", "refseq_ac": "NP_001116316", "gene_names_uniprotkb": "cul4b; im:7140950; im:7150765", "gene_names_refseq": "cul4b; im:7140950; im:7150765", "protein_names_uniprotkb": "Cullin-4B", "protein_names_refseq": "cullin-4B", "tax_id": 7955, "disease": "syndromic X-linked intellectual disability Cabezas type (Disease Ontology:DOID:0060822); intellectual disability (Disease Ontology:DOID:1059)", "pathway": " (dre:560313); (R-DRE-110314); (R-DRE-5696394); (R-DRE-5696395); (R-DRE-5696400); (R-DRE-6781823); (R-DRE-6782135); (R-DRE-6782210); (R-DRE-8951664)", "pathway_count": 9, "publication_count": 6, "publication_id_list": "25274780;26469318;28252024;31055217;31101894;32437540", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01010799.1, GDQQ01014232.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000014.1. On Mar 27, 2008 this sequence version replaced XP_685615.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Results show that cul4a but not cul4b is required for the expression of tbx5a, an essential transcription factor in heart and limb development., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIA7", "ec_number_list": "", "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding;GO:0160072 ubiquitin ligase complex scaffold activity", "go_cellular_component": "GO:0031464 Cul4A-RING E3 ubiquitin ligase complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0031465 Cul4B-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006974 DNA damage response;GO:0042254 ribosome biogenesis;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F8W428-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W475-1", "uniprot_id": "F8W475_DANRE", "mass": 48252.0, "length": 433, "protein_name": "Serpin B6", "gene_name": "serpinb1l4", "organism": "Zebrafish", "refseq_name": "serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4", "refseq_ac": "NP_956235", "gene_names_uniprotkb": "serpinb1l4; fk92d08; wu:fk92d08; zgc:77645", "gene_names_refseq": "fk92d08; serpinb1l4; wu:fk92d08; zgc:77645", "protein_names_uniprotkb": "Serpin B6", "protein_names_refseq": "serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4", "tax_id": 7955, "disease": "", "pathway": " (dre:335229)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16055559;28252024;29666124", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC064292.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH450589.1 and EH476392.1. On Sep 28, 2011 this sequence version replaced NP_956235.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAG1", "ec_number_list": "", "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F8W475-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W477-1", "uniprot_id": "F8W477_DANRE", "mass": 20342.0, "length": 186, "protein_name": "Translocon-associated protein subunit beta", "gene_name": "ssr2", "organism": "Zebrafish", "refseq_name": "translocon-associated protein subunit beta precursor", "refseq_ac": "NP_001001399", "gene_names_uniprotkb": "ssr2; TRAP[b]; TRAPb; wu:fb75b04; zgc:92180", "gene_names_refseq": "TRAP[b]; TRAPb; ssr2; wu:fb75b04; zgc:92180", "protein_names_uniprotkb": "Translocon-associated protein subunit beta; Signal sequence receptor subunit beta; TRAP-beta", "protein_names_refseq": "translocon-associated protein beta; translocon-associated protein subunit beta precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:83414)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11204460;26469318;26891128", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075915.1, CK028681.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1, EH445458.1 and BC075915.1. On or before Oct 29, 2015 this sequence version replaced XP_005159440.1, NP_001001399.1., [RefSeq]; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1MZK6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F8W477-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W4B6-1", "uniprot_id": "F8W4B6_DANRE", "mass": 8510.0, "length": 76, "protein_name": "COX8 domain-containing protein", "gene_name": "si:dkey-85n7.8", "organism": "Zebrafish", "refseq_name": "COX8 domain-containing protein", "refseq_ac": "NP_001373245", "gene_names_uniprotkb": "si:dkey-85n7.8", "gene_names_refseq": "si:dkey-85n7.8", "protein_names_uniprotkb": "COX8 domain-containing protein", "protein_names_refseq": "COX8 domain-containing protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100330915); (R-DRE-5628897); (R-DRE-611105); (R-DRE-9707564); (R-DRE-9864848)", "pathway_count": 5, "publication_count": 2, "publication_id_list": "28837622;35710785", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01016802.1, GDQQ01007887.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On Aug 19, 2020 this sequence version replaced XP_009301947.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AUR7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0045277 respiratory chain complex IV", "go_biological_process": "GO:0006123 mitochondrial electron transport, cytochrome c to oxygen", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F8W4B6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W4F1-1", "uniprot_id": "F8W4F1_DANRE", "mass": 101287.0, "length": 881, "protein_name": "Toll-like receptor 5", "gene_name": "tlr5a", "organism": "Zebrafish", "refseq_name": "toll-like receptor 5", "refseq_ac": "XP_001919052", "gene_names_uniprotkb": "tlr5a", "gene_names_refseq": "tlr5a", "protein_names_uniprotkb": "Toll-like receptor 5", "protein_names_refseq": "toll-like receptor 5", "tax_id": 7955, "disease": "Legionnaires' disease (Disease Ontology:DOID:10457); cystic fibrosis (Disease Ontology:DOID:1485); alcohol use disorder (Disease Ontology:DOID:1574); cystitis (Disease Ontology:DOID:1679); chronic granulomatous disease (Disease Ontology:DOID:3265); melioidosis (Disease Ontology:DOID:5052); ankylosing spondylitis (Disease Ontology:DOID:7147); systemic lupus erythematosus (Disease Ontology:DOID:9074)", "pathway": " (dre:403138)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_001919052.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QK86;X1WGS9", "ec_number_list": "", "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0002253 activation of immune response;GO:0006954 inflammatory response;GO:0045087 innate immune response;GO:0002224 toll-like receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W4F1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W4R5-1", "uniprot_id": "F8W4R5_DANRE", "mass": 13799.0, "length": 121, "protein_name": "Protein yippee-like", "gene_name": "ypel5", "organism": "Zebrafish", "refseq_name": "protein yippee-like 5", "refseq_ac": "NP_001313382", "gene_names_uniprotkb": "ypel5; zgc:63662", "gene_names_refseq": "ypel5; zgc:63662", "protein_names_uniprotkb": "Protein yippee-like", "protein_names_refseq": "protein yippee-like 5", "tax_id": 7955, "disease": "", "pathway": " (dre:100332089); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "15556292;26469318;36948605", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01017121.1, SRR32588731.384047.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476735, SAMEA4476740 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On May 18, 2016 this sequence version replaced XP_002665673.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8M6", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0000151 ubiquitin ligase complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F8W4R5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W4U4-1", "uniprot_id": "F8W4U4_DANRE", "mass": 372582.0, "length": 3315, "protein_name": "Uncharacterized protein xirp2a isoform X1", "gene_name": "xirp2a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein xirp2a isoform X1", "refseq_ac": "XP_021332688", "gene_names_uniprotkb": "xirp2a", "gene_names_refseq": "xirp2a", "protein_names_uniprotkb": "Uncharacterized protein xirp2a isoform X1", "protein_names_refseq": "uncharacterized protein xirp2a isoform X1", "tax_id": 7955, "disease": "depressive disorder (Disease Ontology:DOID:1596)", "pathway": " (dre:559746)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9Q058", "ec_number_list": "", "go_molecular_function": "GO:0051015 actin filament binding;GO:0003779 actin binding", "go_cellular_component": "GO:0070161 anchoring junction", "go_biological_process": "GO:0007015 actin filament organization;GO:0030036 actin cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W4U4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W526-1", "uniprot_id": "F8W526_DANRE", "mass": 76012.0, "length": 683, "protein_name": "Ubiquitin carboxyl-terminal hydrolase MINDY", "gene_name": "mindy4", "organism": "Zebrafish", "refseq_name": "probable ubiquitin carboxyl-terminal hydrolase MINDY-4", "refseq_ac": "XP_002663449", "gene_names_uniprotkb": "mindy4", "gene_names_refseq": "mindy4", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase MINDY; 3.4.19.12", "protein_names_refseq": "probable ubiquitin carboxyl-terminal hydrolase MINDY-4", "tax_id": 7955, "disease": "", "pathway": " (dre:100537560)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002663449.2. COMPLETENESS: full length., [RefSeq]; Hydrolase that can remove 'Lys-48'-linked conjugated ubiquitin from proteins., [UniProtKB, UniProtKB]; Probable hydrolase that can remove 'Lys-48'-linked conjugated ubiquitin from proteins., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RR77", "ec_number_list": "", "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity;GO:1990380 K48-linked deubiquitinase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis;GO:0071108 protein K48-linked deubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W526-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W557-1", "uniprot_id": "F8W557_DANRE", "mass": 153343.0, "length": 1368, "protein_name": "ATP-binding cassette sub-family C member 5", "gene_name": "abcc12", "organism": "Zebrafish", "refseq_name": "ATP-binding cassette sub-family C member 12", "refseq_ac": "XP_009301629", "gene_names_uniprotkb": "abcc12", "gene_names_refseq": "abcc12", "protein_names_uniprotkb": "ATP-binding cassette sub-family C member 5; 7.6.2.2; Multidrug resistance-associated protein 5", "protein_names_refseq": "ATP-binding cassette sub-family C member 12", "tax_id": 7955, "disease": "", "pathway": " (dre:568482); (R-DRE-382556)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B1D4", "ec_number_list": "7.6.2.2;7.6.2.3;5.6.1.6", "go_molecular_function": "GO:0005524 ATP binding;GO:0008559 ABC-type xenobiotic transporter activity;GO:0016887 ATP hydrolysis activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0005796 Golgi lumen;GO:0016020 membrane;GO:0016323 basolateral plasma membrane;GO:0016324 apical plasma membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:1904192 regulation of cholangiocyte apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W557-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W580-1", "uniprot_id": "F8W580_DANRE", "mass": 418284.0, "length": 3772, "protein_name": "[histone H3]-lysine(4) N-methyltransferase", "gene_name": "kmt2bb", "organism": "Zebrafish", "refseq_name": "histone-lysine N-methyltransferase 2B isoform X1", "refseq_ac": "XP_002664717", "gene_names_uniprotkb": "kmt2bb", "gene_names_refseq": "kmt2bb", "protein_names_uniprotkb": "[histone H3]-lysine(4) N-methyltransferase; 2.1.1.364", "protein_names_refseq": "histone-lysine N-methyltransferase 2B isoform X1", "tax_id": 7955, "disease": "colorectal adenocarcinoma (Disease Ontology:DOID:0050861); dystonia 28, childhood-onset (Disease Ontology:DOID:0060936); autosomal dominant intellectual developmental disorder 68 (Disease Ontology:DOID:0061041); prostate cancer (Disease Ontology:DOID:10283); breast cancer (Disease Ontology:DOID:1612); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:566825); (R-DRE-201722)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002664717.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 5, "predicted_n_glycosites": 0, "predicted_o_glycosites": 5, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RHP2", "ec_number_list": "2.1.1.364", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0042800 histone H3K4 methyltransferase activity;GO:0140945 histone H3K4 monomethyltransferase activity", "go_cellular_component": "GO:0035097 histone methyltransferase complex;GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W580-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W5C3-1", "uniprot_id": "F8W5C3_DANRE", "mass": 47013.0, "length": 410, "protein_name": "Thyroxine-binding globulin", "gene_name": "serpina7", "organism": "Zebrafish", "refseq_name": "serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 precursor", "refseq_ac": "NP_001099059", "gene_names_uniprotkb": "serpina7; zgc:103617", "gene_names_refseq": "serpina7; zgc:103617", "protein_names_uniprotkb": "Thyroxine-binding globulin; Serpin A7; T4-binding globulin", "protein_names_refseq": "serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 precursor; serpin peptidase inhibitor-like", "tax_id": 7955, "disease": "corticosteroid-binding globulin deficiency (Disease Ontology:DOID:0090030); adult respiratory distress syndrome (Disease Ontology:DOID:11394); Creutzfeldt-Jakob disease (Disease Ontology:DOID:11949); uveitis (Disease Ontology:DOID:13141); hypothyroidism (Disease Ontology:DOID:1459); cystic fibrosis (Disease Ontology:DOID:1485); diabetic ketoacidosis (Disease Ontology:DOID:1837); severe acute respiratory syndrome (Disease Ontology:DOID:2945); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); lung adenocarcinoma (Disease Ontology:DOID:3910); hyperthyroidism (Disease Ontology:DOID:7998); vasculitis (Disease Ontology:DOID:865); diabetes mellitus (Disease Ontology:DOID:9351); type 2 diabetes mellitus (Disease Ontology:DOID:9352); type 1 diabetes mellitus (Disease Ontology:DOID:9744); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:564060)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16109975;16631158;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC083441.1, SRR32588726.1431970.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708828, SAMN02418768 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On or before Jun 7, 2016 this sequence version replaced NP_001005972.1, NP_001099059.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Major thyroid hormone transport protein in serum., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 16, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFY0", "ec_number_list": "", "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F8W5C3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W5C6-1", "uniprot_id": "F8W5C6_DANRE", "mass": 46674.0, "length": 407, "protein_name": "Sorting nexin", "gene_name": "snx6", "organism": "Zebrafish", "refseq_name": "sorting nexin-6", "refseq_ac": "NP_001025388", "gene_names_uniprotkb": "snx6; fa55b10; im:7146294; wu:fa55b10; zgc:110798", "gene_names_refseq": "fa55b10; im:7146294; snx6; wu:fa55b10; zgc:110798", "protein_names_uniprotkb": "Sorting nexin", "protein_names_refseq": "sorting nexin-6", "tax_id": 7955, "disease": "", "pathway": " (dre:567182)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "16857196;22213104;24218366;26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588724.158235.1, SRR26395028.1162857.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Jun 18, 2016 this sequence version replaced NP_001025388.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Involved in several stages of intracellular trafficking., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7C5", "ec_number_list": "", "go_molecular_function": "GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005768 endosome;GO:0005829 cytosol", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0042147 retrograde transport, endosome to Golgi", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F8W5C6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W5J9-1", "uniprot_id": "F8W5J9_DANRE", "mass": 83379.0, "length": 757, "protein_name": "Solute carrier family 26 member 6", "gene_name": "slc26a6l2", "organism": "Zebrafish", "refseq_name": "solute carrier family 26 member 6", "refseq_ac": "XP_685992", "gene_names_uniprotkb": "slc26a6l2", "gene_names_refseq": "slc26a6l2", "protein_names_uniprotkb": "Solute carrier family 26 member 6", "protein_names_refseq": "solute carrier family 26 member 6", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_685992.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T6L6;A0AC58INW3", "ec_number_list": "", "go_molecular_function": "GO:0019531 oxalate transmembrane transporter activity;GO:0008271 secondary active sulfate transmembrane transporter activity;GO:0015116 sulfate transmembrane transporter activity;GO:0140900 chloride:bicarbonate antiporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:1902476 chloride transmembrane transport;GO:1902358 sulfate transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F8W5J9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W5L7-1", "uniprot_id": "F8W5L7_DANRE", "mass": 67530.0, "length": 593, "protein_name": "Grainyhead-like transcription factor 2a", "gene_name": "grhl2a", "organism": "Zebrafish", "refseq_name": "grainyhead-like transcription factor 2a", "refseq_ac": "NP_001313462", "gene_names_uniprotkb": "grhl2a; zgc:110324", "gene_names_refseq": "grhl2a; zgc:110324", "protein_names_uniprotkb": "Grainyhead-like transcription factor 2a", "protein_names_refseq": "grainyhead-like 2a; grainyhead-like transcription factor 2a", "tax_id": 7955, "disease": "posterior polymorphous corneal dystrophy 4 (Disease Ontology:DOID:0080669); autosomal dominant nonsyndromic deafness 28 (Disease Ontology:DOID:0110557)", "pathway": " (dre:555744)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "19757382;21761484;22223680;22931925;25556858;29242584;32081936;33752003;34570762;35531980", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01017619.1, GFIL01011947.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jun 25, 2025 this sequence version replaced NP_001313462.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8R3", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007420 brain development;GO:0021915 neural tube development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F8W5L7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W5N7-1", "uniprot_id": "F8W5N7_DANRE", "mass": 84598.0, "length": 750, "protein_name": "Relaxin receptor 2b precursor", "gene_name": "rxfp2b", "organism": "Zebrafish", "refseq_name": "relaxin receptor 2b precursor", "refseq_ac": "NP_001315011", "gene_names_uniprotkb": "rxfp2b; lgr8.2; rxfp2a; si:dkey-1o1.1", "gene_names_refseq": "lgr8.2; rxfp2a; rxfp2b; si:dkey-1o1.1", "protein_names_uniprotkb": "Relaxin receptor 2b precursor", "protein_names_refseq": "relaxin receptor 2b precursor; relaxin/insulin-like family peptide receptor 2a; relaxin/insulin-like family peptide receptor 2b", "tax_id": 7955, "disease": "cryptorchidism (Disease Ontology:DOID:11383)", "pathway": " (dre:566888)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "22470432;23008798;26173401;27189481;27773705;28926587;29476039;30703485;33589679;38791457", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01020900.1, EF685706.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715719 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Jun 4, 2016 this sequence version replaced XP_005157421.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9H8", "ec_number_list": "", "go_molecular_function": "GO:0008528 G protein-coupled peptide receptor activity;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway;GO:0009755 hormone-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F8W5N7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "G1K2G6-1", "uniprot_id": "G1K2G6_DANRE", "mass": 107656.0, "length": 975, "protein_name": "G patch domain-containing protein 1", "gene_name": "gpatch1", "organism": "Zebrafish", "refseq_name": "G patch domain-containing protein 1", "refseq_ac": "NP_001191052", "gene_names_uniprotkb": "gpatch1; im:7135982; wu:fc11h11; wu:fj99h08", "gene_names_refseq": "gpatch1; im:7135982; wu:fc11h11; wu:fj99h08", "protein_names_uniprotkb": "G patch domain-containing protein 1", "protein_names_refseq": "G patch domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:448925); (R-DRE-72163)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;34338990", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3M2", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "G1K2G6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "G8JL19-1", "uniprot_id": "G8JL19_DANRE", "mass": 56171.0, "length": 511, "protein_name": "Asc-type amino acid transporter 1", "gene_name": "slc7a10a", "organism": "Zebrafish", "refseq_name": "asc-type amino acid transporter 1", "refseq_ac": "NP_001373301", "gene_names_uniprotkb": "slc7a10a; slc7a10", "gene_names_refseq": "slc7a10a; slc7a10", "protein_names_uniprotkb": "Asc-type amino acid transporter 1", "protein_names_refseq": "asc-type amino acid transporter 1; solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a; solute carrier family 7, (neutral amino acid transporter, y+ system) member 10", "tax_id": 7955, "disease": "", "pathway": " (dre:567420)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23499359;26469318;28252024;31921316;34338990", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003098.1, BC159273.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Aug 21, 2020 this sequence version replaced XP_695808.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7T9", "ec_number_list": "", "go_molecular_function": "GO:0015179 L-amino acid transmembrane transporter activity;GO:0015175 neutral L-amino acid transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0042941 D-alanine transmembrane transport;GO:0042942 D-serine transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "G8JL19-1", "record_type": "protein" }, { "uniprot_canonical_ac": "H0WED3-1", "uniprot_id": "H0WED3_DANRE", "mass": 23001.0, "length": 208, "protein_name": "Arginine vasopressin-induced protein 1", "gene_name": "avpi1", "organism": "Zebrafish", "refseq_name": "arginine vasopressin-induced protein 1", "refseq_ac": "XP_001342555", "gene_names_uniprotkb": "avpi1", "gene_names_refseq": "avpi1", "protein_names_uniprotkb": "Arginine vasopressin-induced protein 1", "protein_names_refseq": "arginine vasopressin-induced protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100002885)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in MAP kinase activation, epithelial sodium channel (ENaC) down-regulation and cell cycling., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PSN2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0043410 positive regulation of MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "H0WED3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "H0WES8-1", "uniprot_id": "H0WES8_DANRE", "mass": 6338.0, "length": 58, "protein_name": "ATP synthase membrane subunit K, mitochondrial", "gene_name": "atp5md", "organism": "Zebrafish", "refseq_name": "ATP synthase F(0) complex subunit k, mitochondrial", "refseq_ac": "NP_001186962", "gene_names_uniprotkb": "atp5md; USMG5; si:dkeyp-80c12.10", "gene_names_refseq": "USMG5; atp5md; atp5mk; si:dkeyp-80c12.10", "protein_names_uniprotkb": "ATP synthase membrane subunit K, mitochondrial", "protein_names_refseq": "ATP synthase F(0) complex subunit k, mitochondrial; ATP synthase membrane subunit DAPIT; diabetes- associated protein in insulin-sensitive tissue (DAPIT); up-regulated during skeletal muscle growth protein 5", "tax_id": 7955, "disease": "mitochondrial complex V (ATP synthase) deficiency nuclear type 6 (Disease Ontology:DOID:0111749)", "pathway": " (dre:794625); (R-DRE-163210); (R-DRE-8949613)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "25475078;27189481;28252024;29234032", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH496800.1, EH446364.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505392 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH496800.1, BC150375.1 and DR729439.1., [RefSeq]; When endogenous z-usmg5 in zebrafish was disrupted using morpholino (MO) oligonucleotides, the pericardial sac and atrial areas were larger and ventricular fractional shortening was reduced compared to in the control MO group. The expression levels of natriuretic peptides were upregulated in the z-usmg5 MO group compared to in controls. Genes in the calcium signalling pathway were downregulated in the z-usmg5 MO group. Erratum:[Sci Rep. 2018 May 14;8(1):7768. doi: 10.1038/s41598-018-26012-4. PMID: 29760517] Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NV68", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0031966 mitochondrial membrane;GO:0045259 proton-transporting ATP synthase complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "H0WES8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "H0WEU8-1", "uniprot_id": "H0WEU8_DANRE", "mass": 4164.0, "length": 37, "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4", "gene_name": "ost4", "organism": "Zebrafish", "refseq_name": "dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4", "refseq_ac": "NP_001289672", "gene_names_uniprotkb": "ost4", "gene_names_refseq": "ost4", "protein_names_uniprotkb": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4", "protein_names_refseq": "dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4; oligosaccharyltransferase 4 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:100534615); (R-DRE-9768727)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH501075.1, EH488381.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1, EH501075.1 and EH488381.1. On Nov 11, 2014 this sequence version replaced XP_003198253.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P6L7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0008250 oligosaccharyltransferase complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "H0WEU8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "H0WF55-1", "uniprot_id": "H0WF55_DANRE", "mass": 41639.0, "length": 362, "protein_name": "Uncharacterized protein znf1078 isoform X1", "gene_name": "znf1078", "organism": "Zebrafish", "refseq_name": "zinc finger protein 1078 isoform 1", "refseq_ac": "NP_001429588", "gene_names_uniprotkb": "znf1078; znf1076", "gene_names_refseq": "si:ch211-145h19.6; si:dkey-220a11.7; si:dkeyp-35e5.10; zgc:173711; zgc:174273; znf1076; znf1077; znf1078", "protein_names_uniprotkb": "Uncharacterized protein znf1078 isoform X1", "protein_names_refseq": "zinc finger protein 1076; zinc finger protein 1077; zinc finger protein 1078 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:565755)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.865509.1, SRR32588726.43869904.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476736, SAMEA4476811 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Aug 20, 2025 this sequence version replaced XP_009299032.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ARN7;E9QES6", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "H0WF55-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1R0A4-1", "uniprot_id": "F1R0A4_DANRE", "mass": 111465.0, "length": 965, "protein_name": "Syndetin isoform X3", "gene_name": "vps50", "organism": "Zebrafish", "refseq_name": "syndetin isoform 2", "refseq_ac": "NP_001352034", "gene_names_uniprotkb": "vps50", "gene_names_refseq": "ccdc132; si:ch211-128d6.1; si:ch211-287b5.1; si:ch211-77k19.1; vps50", "protein_names_uniprotkb": "Syndetin isoform X3", "protein_names_refseq": "VPS50 subunit of EARP/GARPII complex; coiled-coil domain containing 132; syndetin isoform 2", "tax_id": 7955, "disease": "", "pathway": " (dre:137490581)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395039.262232.1, SRR32588728.46454646.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Nov 24, 2025 this sequence version replaced XP_017207797.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YWH5", "ec_number_list": "", "go_molecular_function": "GO:0000149 SNARE binding", "go_cellular_component": "GO:1990745 EARP complex;GO:0005829 cytosol", "go_biological_process": "GO:0015031 protein transport;GO:0042147 retrograde transport, endosome to Golgi;GO:0032456 endocytic recycling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1R0A4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QM62-1", "uniprot_id": "F1QM62_DANRE", "mass": 110954.0, "length": 955, "protein_name": "Sorting nexin-13", "gene_name": "snx13", "organism": "Zebrafish", "refseq_name": "sorting nexin-13 isoform X2", "refseq_ac": "XP_021323914", "gene_names_uniprotkb": "snx13", "gene_names_refseq": "snx13", "protein_names_uniprotkb": "Sorting nexin-13", "protein_names_refseq": "sorting nexin-13 isoform X2", "tax_id": 7955, "disease": "autosomal recessive spinocerebellar ataxia 20 (Disease Ontology:DOID:0080066)", "pathway": " (dre:503733)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PGV3", "ec_number_list": "", "go_molecular_function": "GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005769 early endosome;GO:0031901 early endosome membrane", "go_biological_process": "GO:2001237 negative regulation of extrinsic apoptotic signaling pathway;GO:0010667 negative regulation of cardiac muscle cell apoptotic process;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QM62-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QQ05-1", "uniprot_id": "F1QQ05_DANRE", "mass": 158865.0, "length": 1412, "protein_name": "Vacuolar protein sorting-associated protein 8 homolog", "gene_name": "vps8", "organism": "Zebrafish", "refseq_name": "vacuolar protein sorting-associated protein 8 homolog", "refseq_ac": "NP_001074085", "gene_names_uniprotkb": "vps8; im:7166005; si:dkey-24b15.1; zgc:158695", "gene_names_refseq": "im:7166005; si:dkey-24b15.1; vps8; zgc:158695", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 8 homolog", "protein_names_refseq": "vacuolar protein sorting 8 homolog; vacuolar protein sorting-associated protein 8 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:791134)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "27189481;28252024;30399334;38899385", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505372 [ECO:0000350] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 25, 2025 this sequence version replaced NP_001074085.2. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript was available for the full length of the gene. The genomic coordinates used for the transcript record were based on transcript and protein alignments, including Atlantic salmon ESTs and mouse NP_001074835.1., [RefSeq]; Plays a role in vesicle-mediated protein trafficking of the endocytic membrane transport pathway. Believed to act as a component of the putative CORVET endosomal tethering complexes which is proposed to be involved in the Rab5-to-Rab7 endosome conversion probably implicating MON1A/B, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion. The CORVET complex is proposed to function as a Rab5 effector to mediate early endosome fusion probably in specific endosome subpopulations. Functions predominantly in APPL1-containing endosomes., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1TQD8", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005768 endosome", "go_biological_process": "GO:0006623 protein targeting to vacuole", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F1QQ05-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SZ59-1", "uniprot_id": "RASLC_DANRE", "mass": 28411.0, "length": 255, "protein_name": "Ras-like protein family member 12", "gene_name": "RASL12; rasl12", "organism": "Zebrafish", "refseq_name": "ras-like protein family member 12", "refseq_ac": "NP_956689", "gene_names_uniprotkb": "RASL12; rasl12; zgc:63633", "gene_names_refseq": "rasl12; zgc:63633", "protein_names_uniprotkb": "Ras-like protein family member 12; 3.6.5.2; RAS-like protein Ris", "protein_names_refseq": "RAS-like protein Ris; ras-like protein family member 12", "tax_id": 7955, "disease": "", "pathway": " (dre:393366)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054128.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505387, SAMEA4476730 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054128.1. On or before Oct 5, 2014 this sequence version replaced XP_009298303.1, XP_005172243.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "3.6.5.2;3.6.5.3;3.6.5.5;3.6.1.5;3.6.5.-;3.6.1.-;3.6.5.4", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0003925 G protein activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7SZ59-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A8M9QH25-1", "uniprot_id": "A0A8M9QH25_DANRE", "mass": 242301.0, "length": 2118, "protein_name": "Dysferlin isoform X1", "gene_name": "dysf", "organism": "Zebrafish", "refseq_name": "dysferlin isoform X1", "refseq_ac": "XP_021333230", "gene_names_uniprotkb": "dysf; si:rp71-50c18.1; wu:fb73b05", "gene_names_refseq": "dysf; si:rp71-50c18.1; wu:fb73b05", "protein_names_uniprotkb": "Dysferlin isoform X1", "protein_names_refseq": "dysferlin isoform X1", "tax_id": 7955, "disease": "Miyoshi muscular dystrophy 1 (Disease Ontology:DOID:0070199); autosomal recessive limb-girdle muscular dystrophy type 2B (Disease Ontology:DOID:0110276); distal myopathy with anterior tibial onset (Disease Ontology:DOID:0111187); distal myopathy (Disease Ontology:DOID:11720); limb-girdle muscular dystrophy (Disease Ontology:DOID:11724); muscular dystrophy (Disease Ontology:DOID:9884)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Key calcium ion sensor involved in the Ca(2+)-triggered synaptic vesicle-plasma membrane fusion. Plays a role in the sarcolemma repair mechanism of both skeletal muscle and cardiomyocytes that permits rapid resealing of membranes disrupted by mechanical stress., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0008289 lipid binding", "go_cellular_component": "GO:0012505 endomembrane system;GO:0015630 microtubule cytoskeleton;GO:0030659 cytoplasmic vesicle membrane;GO:0042383 sarcolemma;GO:0030315 T-tubule", "go_biological_process": "GO:0001778 plasma membrane repair;GO:0050765 negative regulation of phagocytosis;GO:0033292 T-tubule organization;GO:0048644 muscle organ morphogenesis;GO:0002281 macrophage activation involved in immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9QH25-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PFM1-1", "uniprot_id": "S20AB_DANRE", "mass": 72063.0, "length": 665, "protein_name": "Sodium-dependent phosphate transporter 1-B", "gene_name": "slc20a1b", "organism": "Zebrafish", "refseq_name": "sodium-dependent phosphate transporter 1-B", "refseq_ac": "NP_997753", "gene_names_uniprotkb": "slc20a1b; cb104; fa05g12; sb:cb104; slc20a1; wu:fa05g12; wu:fb18f05", "gene_names_refseq": "cb104; fa05g12; sb:cb104; slc20a1b; slc20a1; wu:fa05g12; wu:fb18f05", "protein_names_uniprotkb": "Sodium-dependent phosphate transporter 1-B; Solute carrier family 20 member 1-B", "protein_names_refseq": "sodium-dependent phosphate transporter 1-B; solute carrier family 20 (phosphate transporter), member 1b; solute carrier family 20 member 1-B", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-427652)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "16531124", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC057497.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC057497.1., [RefSeq]; Embryonic expression pattern of SLC20A1; SLC20A1 is transcribed from mid-somitogenesis in the anterior part of the pronephros where its expression corresponds to the rostral portion of the expression of other proximal tubule-specific markers, [RefSeq, PubMed]; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport., [UniProtKB]; Sodium-phosphate symporter., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0015293 symporter activity;GO:0005315 phosphate transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0035435 phosphate ion transmembrane transport;GO:0006817 phosphate ion transport", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6PFM1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IS56-1", "uniprot_id": "I3IS56_DANRE", "mass": 164213.0, "length": 1498, "protein_name": "G patch domain-containing protein 8", "gene_name": "gpatch8", "organism": "Zebrafish", "refseq_name": "G patch domain-containing protein 8", "refseq_ac": "NP_001314966", "gene_names_uniprotkb": "gpatch8; fa12a04; fb30h12; gpatc8; wu:fa12a04; wu:fb30h12; wu:fj32a09", "gene_names_refseq": "fa12a04; fb30h12; gpatc8; gpatch8; wu:fa12a04; wu:fb30h12; wu:fj32a09", "protein_names_uniprotkb": "G patch domain-containing protein 8", "protein_names_refseq": "G patch domain-containing protein 8", "tax_id": 7955, "disease": "", "pathway": " (dre:565404)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16109975;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01011811.1, SRR26395039.1162541.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 2, 2016 this sequence version replaced XP_693776.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9F2", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "I3IS56-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH86-1", "uniprot_id": "C149B_DANRE", "mass": 58279.0, "length": 522, "protein_name": "Coiled-coil domain-containing protein 149-B", "gene_name": "ccdc149b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "ccdc149b; ccdc149a; ccdc149; fi16d12; wu:fi16d12; zgc:92601", "gene_names_refseq": "", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 149-B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:436983)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23379336;27189481;31237961", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6DH86-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6GMH0-1", "uniprot_id": "PRP18_DANRE", "mass": 39541.0, "length": 342, "protein_name": "Pre-mRNA-splicing factor 18", "gene_name": "prpf18", "organism": "Zebrafish", "refseq_name": "pre-mRNA-splicing factor 18", "refseq_ac": "NP_001002204", "gene_names_uniprotkb": "prpf18; si:ch211-220f12.3; zgc:91830", "gene_names_refseq": "prpf18; zgc:91830", "protein_names_uniprotkb": "Pre-mRNA-splicing factor 18; PRP18 homolog", "protein_names_refseq": "PRP18 homolog; pre-mRNA-splicing factor 18", "tax_id": 7955, "disease": "", "pathway": " (dre:431751); (R-DRE-72163)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC074081.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC074081.1., [RefSeq]; Participates in the second step of pre-mRNA splicing., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KPM2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016607 nuclear speck;GO:0005682 U5 snRNP;GO:0046540 U4/U6 x U5 tri-snRNP complex;GO:0071021 U2-type post-spliceosomal complex;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0000350 generation of catalytic spliceosome for second transesterification step;GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6GMH0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ISV3-1", "uniprot_id": "I3ISV3_DANRE", "mass": 49253.0, "length": 440, "protein_name": "RNA-binding protein NOB1", "gene_name": "nob1", "organism": "Zebrafish", "refseq_name": "RNA-binding protein NOB1 isoform X1", "refseq_ac": "XP_683754", "gene_names_uniprotkb": "nob1", "gene_names_refseq": "nob1", "protein_names_uniprotkb": "RNA-binding protein NOB1", "protein_names_refseq": "RNA-binding protein NOB1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:557254); (R-DRE-6791226)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_683754.1. COMPLETENESS: full length., [RefSeq]; May play a role in mRNA degradation. Endonuclease required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEG7", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016787 hydrolase activity;GO:0004521 RNA endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0030688 preribosome, small subunit precursor", "go_biological_process": "GO:0042274 ribosomal small subunit biogenesis;GO:0030490 maturation of SSU-rRNA", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3ISV3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8AW58-1", "uniprot_id": "Q8AW58_DANRE", "mass": 80229.0, "length": 706, "protein_name": "2.3.2.26; G2/M phase-specific E3 ubiquitin-protein ligase", "gene_name": "g2e3", "organism": "Zebrafish", "refseq_name": "G2/M phase-specific E3 ubiquitin-protein ligase", "refseq_ac": "NP_001003822", "gene_names_uniprotkb": "g2e3; sb:cb726; si:busm1-234g15.1; si:dz234g15.1; wu:fe02a06; wu:fe24c12", "gene_names_refseq": "g2e3; sb:cb726; si:busm1-234g15.1; si:dz234g15.1; wu:fe02a06; wu:fe24c12", "protein_names_uniprotkb": "2.3.2.26; G2/M phase-specific E3 ubiquitin-protein ligase", "protein_names_refseq": "G2/M phase-specific E3 ubiquitin-protein ligase; G2/M-phase specific E3 ubiquitin ligase", "tax_id": 7955, "disease": "", "pathway": " (dre:368848)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "12045154;16109975;26469318;27189481;36846912", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC100036.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL596026.13., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F6P7Y7;Q78AN7", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004842 ubiquitin-protein transferase activity;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8AW58-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITI8-1", "uniprot_id": "I3ITI8_DANRE", "mass": 62247.0, "length": 574, "protein_name": "Abl interactor 2b isoform X1", "gene_name": "abi2b", "organism": "Zebrafish", "refseq_name": "abl interactor 2b isoform X1", "refseq_ac": "XP_005165829", "gene_names_uniprotkb": "abi2b; zgc:136560", "gene_names_refseq": "abi2b; zgc:136560", "protein_names_uniprotkb": "Abl interactor 2b isoform X1", "protein_names_refseq": "abl interactor 2b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-2029482); (R-DRE-5663213); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013423)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BDA0", "ec_number_list": "", "go_molecular_function": "GO:0035591 signaling adaptor activity", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0030027 lamellipodium;GO:0030175 filopodium;GO:0031209 SCAR complex;GO:0098858 actin-based cell projection", "go_biological_process": "GO:0001764 neuron migration;GO:0048858 cell projection morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3ITI8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYI0-1", "uniprot_id": "HERP2_DANRE", "mass": 43730.0, "length": 397, "protein_name": "Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein", "gene_name": "herpud2", "organism": "Zebrafish", "refseq_name": "homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein", "refseq_ac": "NP_956482", "gene_names_uniprotkb": "herpud2; zgc:56020; zgc:76968", "gene_names_refseq": "herpud2; zgc:56020; zgc:76968", "protein_names_uniprotkb": "Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein", "protein_names_refseq": "homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein", "tax_id": 7955, "disease": "", "pathway": " (dre:393157)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "19801576", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045865.1, BC066585.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045865.1., [RefSeq]; Could be involved in the unfolded protein response (UPR) pathway., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]; PRKCSH functions as a chaperone-like molecule, which prevents endoplasmic reticulum-associated degradation of TRPP2., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q7ZVH0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0030968 endoplasmic reticulum unfolded protein response;GO:0006986 response to unfolded protein", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NYI0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P121-1", "uniprot_id": "HYCCI_DANRE", "mass": 56428.0, "length": 518, "protein_name": "Hyccin", "gene_name": "hycc1", "organism": "Zebrafish", "refseq_name": "hyccin", "refseq_ac": "NP_991193", "gene_names_uniprotkb": "hycc1; fam126a; zgc:77228", "gene_names_refseq": "fam126a; hycc1; zgc:77228", "protein_names_uniprotkb": "Hyccin", "protein_names_refseq": "family with sequence similarity 126 member A; hyccin", "tax_id": 7955, "disease": "hypomyelinating leukodystrophy 5 (Disease Ontology:DOID:0060793)", "pathway": " (dre:402926)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065326.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065326.1., [RefSeq]; Component of a complex required to localize phosphatidylinositol 4-kinase (PI4K) to the plasma membrane. The complex acts as a regulator of phosphatidylinositol 4-phosphate (PtdIns(4)P) synthesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0072659 protein localization to plasma membrane;GO:0042552 myelination;GO:0046854 phosphatidylinositol phosphate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P121-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBT9-1", "uniprot_id": "Z385B_DANRE", "mass": 52604.0, "length": 492, "protein_name": "Zinc finger protein 385B", "gene_name": "znf385b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "znf385b; Zfp533; si:busm1-42h5.1; si:by51i9.1; si:dz145b16.1; si:dz42h5.1; si:xx-51i9.1; wu:fj47d04; zgc:73248; znf533", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger protein 385B; Zinc finger protein 533", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:368405)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "22286130;23671706;26469318;27189481;31468037", "class_list": "", "function": "May play a role in p53/TP53-mediated apoptosis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator;GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6PBT9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM89-1", "uniprot_id": "RH42A_DANRE", "mass": 91152.0, "length": 805, "protein_name": "Rho GTPase-activating protein 42", "gene_name": "arhgap42a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "arhgap42a; arhgap42; bZ1P14.10; fj51b01; si:bz1p14.10; si:rp71-1p14.10; wu:fj51b01", "gene_names_refseq": "", "protein_names_uniprotkb": "Rho GTPase-activating protein 42; Rho GTPase-activating protein 10-like; Rho-type GTPase-activating protein 42", "protein_names_refseq": "", "tax_id": 7955, "disease": "Billuart-type X-linked syndromic intellectual developmental disorder (Disease Ontology:DOID:0080311)", "pathway": " (dre:566275); (R-DRE-8980692); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013423)", "pathway_count": 6, "publication_count": 2, "publication_id_list": "23594743;27189481", "class_list": "", "function": "May influence blood pressure by functioning as a GTPase-activating protein in vascular smooth muscle., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QUD4", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6ZM89-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQT4-1", "uniprot_id": "CSN2_DANRE", "mass": 51572.0, "length": 443, "protein_name": "COP9 signalosome complex subunit 2", "gene_name": "cops2", "organism": "Zebrafish", "refseq_name": "COP9 signalosome complex subunit 2", "refseq_ac": "NP_001002055", "gene_names_uniprotkb": "cops2; csn2; wu:fc05f05; wu:fc06g10; wu:fc60f04; wu:fl94f12; zgc:86624", "gene_names_refseq": "cops2; wu:fc05f05; wu:fc06g10; wu:fc60f04; wu:fl94f12; zgc:86624", "protein_names_uniprotkb": "COP9 signalosome complex subunit 2; Signalosome subunit 2", "protein_names_refseq": "Alien; COP9 constitutive photomorphogenic homolog subunit 2; COP9 signalosome complex subunit 2; signalosome subunit 2", "tax_id": 7955, "disease": "", "pathway": " (dre:415145); (R-DRE-5696394); (R-DRE-6781823); (R-DRE-8856825); (R-DRE-8951664); (R-DRE-9013422)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071320.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071320.1., [RefSeq]; Essential component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0000338 protein deneddylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6IQT4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6TNU3-1", "uniprot_id": "INT10_DANRE", "mass": 81159.0, "length": 715, "protein_name": "Integrator complex subunit 10", "gene_name": "ints10", "organism": "Zebrafish", "refseq_name": "integrator complex subunit 10 isoform 2", "refseq_ac": "NP_997804", "gene_names_uniprotkb": "ints10; fc31c07; wu:fb96d03; wu:fc31c07; wu:fi39h05; zgc:111853; zgc:136485", "gene_names_refseq": "fc31c07; ints10; wu:fb96d03; wu:fc31c07; wu:fi39h05; zgc:111853; zgc:136485", "protein_names_uniprotkb": "Integrator complex subunit 10; Int10", "protein_names_refseq": "int10; integrator complex subunit 10 isoform 2", "tax_id": 7955, "disease": "", "pathway": " (dre:323368); (R-DRE-6807505)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.1154505.1, GDQH01019859.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA3505392 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On or before Jul 11, 2025 this sequence version replaced XP_068069265.1, NP_997804.1., [RefSeq]; Component of the integrator complex, a multiprotein complex that terminates RNA polymerase II (Pol II) transcription in the promoter-proximal region of genes. The integrator complex provides a quality checkpoint during transcription elongation by driving premature transcription termination of transcripts that are unfavorably configured for transcriptional elongation: the complex terminates transcription by (1) catalyzing dephosphorylation of the C-terminal domain (CTD) of Pol II subunit POLR2A/RPB1 and SUPT5H/SPT5, (2) degrading the exiting nascent RNA transcript via endonuclease activity and (3) promoting the release of Pol II from bound DNA. The integrator complex is also involved in terminating the synthesis of non-coding Pol II transcripts, such as enhancer RNAs (eRNAs), small nuclear RNAs (snRNAs), telomerase RNAs and long non-coding RNAs (lncRNAs)., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0032039 integrator complex;GO:0160232 INTAC complex", "go_biological_process": "GO:0016180 snRNA processing;GO:0160240 RNA polymerase II transcription initiation surveillance", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6TNU3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZZC6-1", "uniprot_id": "CENPM_DANRE", "mass": 20493.0, "length": 186, "protein_name": "Centromere protein M", "gene_name": "cenpm; pane1", "organism": "Zebrafish", "refseq_name": "centromere protein M", "refseq_ac": "NP_991153", "gene_names_uniprotkb": "cenpm; pane1; cenpm; pane1; zgc:123137", "gene_names_refseq": "cenpm; pane1; zgc:123137", "protein_names_uniprotkb": "Centromere protein M; CENP-M; Proliferation-associated nuclear element 1", "protein_names_refseq": "CENP-M; centromere protein M; proliferation-associated nuclear element 1", "tax_id": 7955, "disease": "", "pathway": " (dre:402852); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 1, "publication_id_list": "15183305", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092916.1, EH542899.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB926063.1, AY277636.1, EH564037.1 and BI672195.1. On Dec 17, 2008 this sequence version replaced NP_991153.1., [RefSeq]; Probable component of a centromeric complex involved in assembly of kinetochore proteins, mitotic progression and chromosome segregation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3B7F7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZZC6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IS77-1", "uniprot_id": "I3IS77_DANRE", "mass": 122332.0, "length": 1093, "protein_name": "Bromodomain testis-specific protein isoform X1", "gene_name": "brdt", "organism": "Zebrafish", "refseq_name": "bromodomain testis-specific protein isoform X1", "refseq_ac": "XP_002662470", "gene_names_uniprotkb": "brdt; fi25h02; si:dkeyp-85h7.3; wu:fi25h02", "gene_names_refseq": "brdt; fi25h02; si:dkeyp-85h7.3; wu:fi25h02", "protein_names_uniprotkb": "Bromodomain testis-specific protein isoform X1", "protein_names_refseq": "bromodomain testis-specific protein isoform X1", "tax_id": 7955, "disease": "spermatogenic failure 21 (Disease Ontology:DOID:0070163); azoospermia (Disease Ontology:DOID:14227); oligospermia (Disease Ontology:DOID:14228)", "pathway": " (dre:333996)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "24240475;25267534;29870789;34329618", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002662470.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGL6;A0AC58JQF9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "I3IS77-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBL0-1", "uniprot_id": "TIM16_DANRE", "mass": 14284.0, "length": 129, "protein_name": "Mitochondrial import inner membrane translocase subunit tim16", "gene_name": "pam16", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "pam16; magmas; tim16; timm16; zgc:73356", "gene_names_refseq": "", "protein_names_uniprotkb": "Mitochondrial import inner membrane translocase subunit tim16; Presequence translocated-associated motor subunit pam16", "protein_names_refseq": "", "tax_id": 7955, "disease": "spondylometaphyseal dysplasia Megarbane-Dagher-Melike type (Disease Ontology:DOID:0112304); osteochondrodysplasia (Disease Ontology:DOID:2256)", "pathway": " (dre:393777)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "28252024;36198703", "class_list": "", "function": "Regulates ATP-dependent protein translocation into the mitochondrial matrix., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005744 TIM23 mitochondrial import inner membrane translocase complex;GO:0001405 PAM complex, Tim23 associated import motor", "go_biological_process": "GO:0030150 protein import into mitochondrial matrix", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6PBL0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBY7-1", "uniprot_id": "TPC13_DANRE", "mass": 46201.0, "length": 412, "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "trappc13", "organism": "Zebrafish", "refseq_name": "trafficking protein particle complex subunit 13 isoform 2", "refseq_ac": "NP_955832", "gene_names_uniprotkb": "trappc13; cb318; sb:cb318; wu:fa04a08; zgc:73187", "gene_names_refseq": "cb318; sb:cb318; trappc13; wu:fa04a08; zgc:73187", "protein_names_uniprotkb": "Trafficking protein particle complex subunit 13", "protein_names_refseq": "UPF0533 protein C5orf44 homolog; trafficking protein particle complex 13; trafficking protein particle complex subunit 13 isoform 2", "tax_id": 7955, "disease": "", "pathway": " (dre:321203); (R-DRE-8876198)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "16109975;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059537.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH553803.1, EH541314.1, EH581545.1, EH462199.1 and EH598931.1. On Sep 23, 2011 this sequence version replaced NP_955832.1. Transcript Variant: This variant (2) lacks an exon in the coding region compared to variant 1. The resulting protein (isoform 2) is shorter but has the same N- and C-termini compared to isoform 1., [RefSeq]; Component of the multisubunit TRAPP (transport protein particle) III complex (By similarity). As a component of TRAPPIII complex, participates in the activation of RAB1 and RAB43, but not RAB11A, RAB11B, nor RAB19 (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:1990072 TRAPPIII protein complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6PBY7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DC17-1", "uniprot_id": "MZT2_DANRE", "mass": 16171.0, "length": 153, "protein_name": "Mitotic-spindle organizing protein 2", "gene_name": "mzt2b; mzt2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "mzt2b; mzt2; fam128; mozart2; mzt2; zgc:101080", "gene_names_refseq": "", "protein_names_uniprotkb": "Mitotic-spindle organizing protein 2; Mitotic-spindle organizing protein associated with a ring of gamma-tubulin 2", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:445174); (R-DRE-380320)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26147098;26469318;28252024", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0005819 spindle;GO:0000931 gamma-tubulin ring complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6DC17-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZV03-1", "uniprot_id": "VP26B_DANRE", "mass": 38627.0, "length": 331, "protein_name": "Vacuolar protein sorting-associated protein 26B", "gene_name": "vps26b", "organism": "Zebrafish", "refseq_name": "vacuolar protein sorting-associated protein 26B", "refseq_ac": "NP_998540", "gene_names_uniprotkb": "vps26b; wu:fb49d07; wu:fb50d06; zgc:56297", "gene_names_refseq": "vps26b; wu:fb49d07; wu:fb50d06; zgc:56297", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 26B; Vesicle protein sorting 26B", "protein_names_refseq": "vacuolar protein sorting 26 homolog B; vacuolar protein sorting-associated protein 26B; vesicle protein sorting 26B", "tax_id": 7955, "disease": "brain cancer (Disease Ontology:DOID:1319)", "pathway": " (dre:406684)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046056.1, EE691942.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046056.1., [RefSeq]; Acts as a component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. Retromer mediates retrograde transport of cargo proteins from endosomes to the trans-Golgi network (TGN) (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0030906 retromer, cargo-selective complex;GO:0005768 endosome;GO:0005829 cytosol", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0042147 retrograde transport, endosome to Golgi", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZV03-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DEL7-1", "uniprot_id": "KLH15_DANRE", "mass": 69506.0, "length": 604, "protein_name": "Kelch-like protein 15", "gene_name": "klhl15", "organism": "Zebrafish", "refseq_name": "kelch-like protein 15", "refseq_ac": "NP_001003580", "gene_names_uniprotkb": "klhl15; wu:fa66h10; zgc:101051", "gene_names_refseq": "klhl15; wu:fa66h10; zgc:101051", "protein_names_uniprotkb": "Kelch-like protein 15", "protein_names_refseq": "kelch-like 15; kelch-like protein 15", "tax_id": 7955, "disease": "non-syndromic X-linked intellectual disability 103 (Disease Ontology:DOID:0112020)", "pathway": " (dre:445186)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC077093.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505382, SAMEA4476730 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC077093.1., [RefSeq]; Substrate-specific adapter for an E3 ubiquitin-protein ligase complex., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:1990756 ubiquitin-like ligase-substrate adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0031463 Cul3-RING ubiquitin ligase complex", "go_biological_process": "GO:2000042 negative regulation of double-strand break repair via homologous recombination;GO:0016567 protein ubiquitination;GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DEL7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803Q4-1", "uniprot_id": "DEP1A_DANRE", "mass": 90690.0, "length": 800, "protein_name": "DEP domain-containing protein 1A", "gene_name": "depdc1a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "depdc1a; cb41; depdc1; sb:cb41; wu:fc05g03; zgc:55374", "gene_names_refseq": "", "protein_names_uniprotkb": "DEP domain-containing protein 1A", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:100003959)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803Q4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P0H6-1", "uniprot_id": "CSN4_DANRE", "mass": 46346.0, "length": 406, "protein_name": "COP9 signalosome complex subunit 4", "gene_name": "cops4", "organism": "Zebrafish", "refseq_name": "COP9 signalosome complex subunit 4", "refseq_ac": "NP_991119", "gene_names_uniprotkb": "cops4; csn4; fc90c08; wu:fc90c08; zgc:77137", "gene_names_refseq": "cops4; fc90c08; wu:fc90c08; zgc:77137", "protein_names_uniprotkb": "COP9 signalosome complex subunit 4; Signalosome subunit 4", "protein_names_refseq": "COP9 signalosome complex subunit 4; signalosome subunit 4", "tax_id": 7955, "disease": "", "pathway": " (dre:325592); (R-DRE-5696394); (R-DRE-6781823); (R-DRE-8856825); (R-DRE-8951664); (R-DRE-9013422)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065617.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065617.1., [RefSeq]; Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes (By similarity). The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PHJ7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0008021 synaptic vesicle;GO:0008180 COP9 signalosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P0H6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T006-1", "uniprot_id": "TELO2_DANRE", "mass": 91669.0, "length": 822, "protein_name": "Telomere length regulation protein TEL2 homolog", "gene_name": "telo2", "organism": "Zebrafish", "refseq_name": "telomere length regulation protein TEL2 homolog isoform 1", "refseq_ac": "NP_001071209", "gene_names_uniprotkb": "telo2; si:ch211-153c20.2; zC153C20.2; zgc:153824", "gene_names_refseq": "si:ch211-153c20.2; telo2; zC153C20.2; zgc:153824", "protein_names_uniprotkb": "Telomere length regulation protein TEL2 homolog", "protein_names_refseq": "telomere length regulation protein TEL2 homolog isoform 1; telomere length regulation protein TEL2 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:777634)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "12234666;23594743;33436952;34390914;35385752", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC125895.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505382, SAMEA3505388 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125895.1., [RefSeq]; Regulator of the DNA damage response (DDR). Part of the TTT complex that is required to stabilize protein levels of the phosphatidylinositol 3-kinase-related protein kinase (PIKK) family proteins. Promotes assembly, stabilizes and maintains the activity of TORC complexes, which regulate cell growth and survival in response to nutrient and hormonal signals. May be involved in telomere length regulation (By similarity)., [UniProtKB]; Tel2 regulates redifferentiation of bipotential progenitor cells via Hhex during zebrafish liver regeneration., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0JMI8", "ec_number_list": "", "go_molecular_function": "GO:0042162 telomeric DNA binding;GO:0051879 Hsp90 protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0016020 membrane;GO:0005737 cytoplasm", "go_biological_process": "GO:0051083 'de novo' cotranslational protein folding;GO:0097421 liver regeneration", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q7T006-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PCR6-1", "uniprot_id": "ZFR_DANRE", "mass": 116523.0, "length": 1074, "protein_name": "Zinc finger RNA-binding protein", "gene_name": "zfr", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "zfr; hnrpa1; wu:fb25b08; zgc:66235; zgc:66403", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger RNA-binding protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:321659)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "16109975;16132083;21091219;25556858;40044042", "class_list": "", "function": "Involved in postimplantation and gastrulation stages of development. Binds to DNA and RNA (By similarity)., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003725 double-stranded RNA binding;GO:0003727 single-stranded RNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q6PCR6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQ85-1", "uniprot_id": "YIPF6_DANRE", "mass": 26320.0, "length": 240, "protein_name": "Protein YIPF6", "gene_name": "yipf6", "organism": "Zebrafish", "refseq_name": "protein YIPF6", "refseq_ac": "NP_001002096", "gene_names_uniprotkb": "yipf6; zgc:86904", "gene_names_refseq": "yipf6; zgc:86904", "protein_names_uniprotkb": "Protein YIPF6; YIP1 family member 6", "protein_names_refseq": "YIP1 family member 6; protein YIPF6", "tax_id": 7955, "disease": "", "pathway": " (dre:415186)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071525.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505385, SAMEA4476783 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071525.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005797 Golgi medial cisterna;GO:0005802 trans-Golgi network;GO:0000138 Golgi trans cisterna", "go_biological_process": "GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6IQ85-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITC3-1", "uniprot_id": "I3ITC3_DANRE", "mass": 107692.0, "length": 995, "protein_name": "Protein Wiz isoform X1", "gene_name": "wiza", "organism": "Zebrafish", "refseq_name": "protein Wiz isoform X1", "refseq_ac": "XP_009300443", "gene_names_uniprotkb": "wiza", "gene_names_refseq": "wiza", "protein_names_uniprotkb": "Protein Wiz isoform X1", "protein_names_refseq": "protein Wiz isoform X1", "tax_id": 7955, "disease": "atherosclerosis (Disease Ontology:DOID:1936)", "pathway": " (dre:556689)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AT47", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3ITC3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ISA2-1", "uniprot_id": "I3ISA2_DANRE", "mass": 125936.0, "length": 1176, "protein_name": "Ubinuclein-2a isoform X1", "gene_name": "ubn2a", "organism": "Zebrafish", "refseq_name": "ubinuclein-2a isoform X1", "refseq_ac": "XP_005165772", "gene_names_uniprotkb": "ubn2a; ubn2; zgc:158248", "gene_names_refseq": "ubn2a; ubn2; zgc:158248", "protein_names_uniprotkb": "Ubinuclein-2a isoform X1", "protein_names_refseq": "ubinuclein-2a isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BCZ5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3ISA2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IMK3-1", "uniprot_id": "DJC27_DANRE", "mass": 31108.0, "length": 273, "protein_name": "DnaJ homolog subfamily C member 27", "gene_name": "dnajc27", "organism": "Zebrafish", "refseq_name": "dnaJ homolog subfamily C member 27", "refseq_ac": "NP_001007163", "gene_names_uniprotkb": "dnajc27; rbj; zgc:194263; zgc:194279", "gene_names_refseq": "dnajc27; rbj; zgc:194263; zgc:194279", "protein_names_uniprotkb": "DnaJ homolog subfamily C member 27; Rab and DnaJ domain-containing protein", "protein_names_refseq": "dnaJ homolog subfamily C member 27; rab and DnaJ domain-containing protein", "tax_id": 7955, "disease": "", "pathway": " (dre:402784)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "14980719;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC162857.1, BK001388.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC162873.1., [RefSeq]; GTPase possibly involved in regulation of the MEK/ERK pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006886 intracellular protein transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6IMK3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DC61-1", "uniprot_id": "MND1_DANRE", "mass": 25176.0, "length": 220, "protein_name": "Meiotic nuclear division protein 1 homolog", "gene_name": "mnd1", "organism": "Zebrafish", "refseq_name": "meiotic nuclear division protein 1 homolog", "refseq_ac": "NP_001003597", "gene_names_uniprotkb": "mnd1; zgc:101017", "gene_names_refseq": "mnd1; zgc:101017", "protein_names_uniprotkb": "Meiotic nuclear division protein 1 homolog", "protein_names_refseq": "meiotic nuclear division protein 1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:445203)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078223.1, CK687630.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898404, SAMN18715719 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078223.1. On Jul 6, 2005 this sequence version replaced XP_701494.1., [RefSeq]; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0007131 reciprocal meiotic recombination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DC61-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZW46-1", "uniprot_id": "S35B4_DANRE", "mass": 37221.0, "length": 331, "protein_name": "UDP-xylose and UDP-N-acetylglucosamine transporter", "gene_name": "slc35b4", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "slc35b4; fc08c12; fc29f04; fi03h11; wu:fc08c12; wu:fc29f04; wu:fi03h11; zgc:55288", "gene_names_refseq": "", "protein_names_uniprotkb": "UDP-xylose and UDP-N-acetylglucosamine transporter; Solute carrier family 35 member B4", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:323737); (R-DRE-727802)", "pathway_count": 2, "publication_count": 8, "publication_id_list": "21722753;22137762;23315130;23416188;26469318;27189481;29180630;30631305", "class_list": "", "function": "Sugar transporter that specifically mediates the transport of UDP-xylose (UDP-Xyl) and UDP-N-acetylglucosamine (UDP-GlcNAc) from cytosol into Golgi., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005462 UDP-N-acetylglucosamine transmembrane transporter activity;GO:0005464 UDP-xylose transmembrane transporter activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005789 endoplasmic reticulum membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:1990569 UDP-N-acetylglucosamine transmembrane transport;GO:0055085 transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q7ZW46-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P964-1", "uniprot_id": "P4R2A_DANRE", "mass": 46193.0, "length": 420, "protein_name": "Serine/threonine-protein phosphatase 4 regulatory subunit 2-A", "gene_name": "ppp4r2a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "ppp4r2a; fe11b04; ppp4r2; wu:fe11b04", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase 4 regulatory subunit 2-A", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:326723); (R-DRE-5693607)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "Regulatory subunit of serine/threonine-protein phosphatase 4 (PP4C)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A7MBR6", "ec_number_list": "", "go_molecular_function": "GO:0019888 protein phosphatase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0030289 protein phosphatase 4 complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6P964-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PFL8-1", "uniprot_id": "THYN1_DANRE", "mass": 26513.0, "length": 231, "protein_name": "Thymocyte nuclear protein 1", "gene_name": "thyn1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "thyn1; zgc:66269", "gene_names_refseq": "", "protein_names_uniprotkb": "Thymocyte nuclear protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:393630)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6PFL8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NXD8-1", "uniprot_id": "DEN5B_DANRE", "mass": 147701.0, "length": 1311, "protein_name": "DENN domain-containing protein 5B", "gene_name": "dennd5b", "organism": "Zebrafish", "refseq_name": "DENN domain-containing protein 5B", "refseq_ac": "NP_997809", "gene_names_uniprotkb": "dennd5b; id:ibd5082; si:ch211-11c20.2; wu:fc01g04; zgc:77218", "gene_names_refseq": "dennd5b; id:ibd5082; wu:fc01g04; zgc:77218", "protein_names_uniprotkb": "DENN domain-containing protein 5B; Rab6IP1-like protein", "protein_names_refseq": "DENN domain-containing protein 5B; RAB6IP1-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:323528)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC067136.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC067136.1., [RefSeq]; Guanine nucleotide exchange factor (GEF) which may activate the small GTPases Rab. May promote the exchange of GDP to GTP, converting inactive GDP-bound Rab proteins into their active GTP-bound form (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5RJ77", "ec_number_list": "", "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity;GO:0031267 small GTPase binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NXD8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NWF4-1", "uniprot_id": "VPS25_DANRE", "mass": 20706.0, "length": 174, "protein_name": "Vacuolar protein-sorting-associated protein 25", "gene_name": "vps25", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "vps25; im:6898134; zgc:162560", "gene_names_refseq": "", "protein_names_uniprotkb": "Vacuolar protein-sorting-associated protein 25; ESCRT-II complex subunit VPS25", "protein_names_refseq": "", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162); carcinoma (Disease Ontology:DOID:305)", "pathway": " (dre:407684); (R-DRE-917729)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. The MVB pathway mediates delivery of transmembrane proteins into the lumen of the lysosome for degradation. The ESCRT-II complex is probably involved in the recruitment of the ESCRT-III complex (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0005198 structural molecule activity", "go_cellular_component": "GO:0000814 ESCRT II complex", "go_biological_process": "GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway;GO:0016236 macroautophagy;GO:0071985 multivesicular body sorting pathway;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6NWF4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DRD4-1", "uniprot_id": "CENPL_DANRE", "mass": 40637.0, "length": 367, "protein_name": "Centromere protein L", "gene_name": "cenpl", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "cenpl; dj383j4.3l; si:dj383j4.3l", "gene_names_refseq": "", "protein_names_uniprotkb": "Centromere protein L; CENP-L", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:445401); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 2, "publication_id_list": "15256591;26469318", "class_list": "", "function": "Probable component of a centromeric complex involved in assembly of kinetochore proteins, mitotic progression and chromosome segregation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q502U4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6DRD4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PEH8-1", "uniprot_id": "MED25_DANRE", "mass": 75463.0, "length": 701, "protein_name": "Mediator of RNA polymerase II transcription subunit 25", "gene_name": "med25", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 25", "refseq_ac": "NP_999931", "gene_names_uniprotkb": "med25; zgc:63555", "gene_names_refseq": "med25; zgc:63555", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 25; Mediator complex subunit 25", "protein_names_refseq": "mediator of RNA polymerase II transcription subunit 25; mediator of RNA polymerase II transcription, subunit 25 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:406793)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC058057.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC058057.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005667 transcription regulator complex;GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0060021 roof of mouth development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PEH8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DEL2-1", "uniprot_id": "CLPT1_DANRE", "mass": 72898.0, "length": 631, "protein_name": "Putative lipid scramblase CLPTM1", "gene_name": "clptm1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "clptm1; cb102; sb:cb102; zgc:100803", "gene_names_refseq": "", "protein_names_uniprotkb": "Putative lipid scramblase CLPTM1; Cleft lip and palate transmembrane protein 1 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:795480)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23457027;28252024;40044042", "class_list": "", "function": "Involved in GABAergic but not glutamatergic transmission. Binds and traps GABAA receptors in the endoplasmic reticulum (ER). Modulates postsynaptic GABAergic transmission, and therefore inhibitory neurotransmission, by reducing the plasma membrane expression of these receptors. Altered GABAergic signaling is one among many causes of cleft palate (By similarity). Might function as a lipid scramblase, translocating lipids in membranes from one leaflet to the other one (By similarity). Required for efficient glycosylphosphatidylinositol (GPI) inositol deacylation in the ER, which is a crucial step to switch GPI-anchored proteins (GPI-APs) from protein folding to transport states (By similarity). May play a role in T-cell development (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6DEL2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "H9GXL1-1", "uniprot_id": "H9GXL1_DANRE", "mass": 93049.0, "length": 841, "protein_name": "Suppressor of tumorigenicity 14 protein homolog", "gene_name": "st14", "organism": "Zebrafish", "refseq_name": "suppressor of tumorigenicity 14 protein homolog", "refseq_ac": "XP_685356", "gene_names_uniprotkb": "st14", "gene_names_refseq": "st14", "protein_names_uniprotkb": "Suppressor of tumorigenicity 14 protein homolog", "protein_names_refseq": "suppressor of tumorigenicity 14 protein homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:557248)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_685356.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7USU9", "ec_number_list": "", "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0008236 serine-type peptidase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0009566 fertilization;GO:0016485 protein processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "H9GXL1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IRX1-1", "uniprot_id": "I3IRX1_DANRE", "mass": 84284.0, "length": 771, "protein_name": "Protein FAM171B precursor", "gene_name": "fam171b", "organism": "Zebrafish", "refseq_name": "protein FAM171B precursor", "refseq_ac": "NP_001410035", "gene_names_uniprotkb": "fam171b", "gene_names_refseq": "fam171b", "protein_names_uniprotkb": "Protein FAM171B precursor", "protein_names_refseq": "protein FAM171B precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:561242)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01023439.1, SRR26395062.607266.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Jul 5, 2023 this sequence version replaced XP_689740.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T5V6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "I3IRX1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IRX3-1", "uniprot_id": "I3IRX3_DANRE", "mass": 53627.0, "length": 466, "protein_name": "Calcitonin gene-related peptide type 1 receptor", "gene_name": "calcrlb", "organism": "Zebrafish", "refseq_name": "calcitonin gene-related peptide type 1 receptor", "refseq_ac": "XP_001920035", "gene_names_uniprotkb": "calcrlb", "gene_names_refseq": "calcrlb", "protein_names_uniprotkb": "Calcitonin gene-related peptide type 1 receptor; Calcitonin receptor-like receptor", "protein_names_refseq": "calcitonin gene-related peptide type 1 receptor", "tax_id": 7955, "disease": "hereditary lymphedema (Disease Ontology:DOID:0050580)", "pathway": " (dre:567131)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001920035.2. COMPLETENESS: full length., [RefSeq]; May function as G protein-coupled receptor for calcitonin-gene-related peptides and adrenomedullin. Specificity may be modulated by accessory proteins. May activate cAMP-dependent pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QL56", "ec_number_list": "", "go_molecular_function": "GO:0004948 calcitonin receptor activity;GO:0001605 adrenomedullin receptor activity;GO:0001635 calcitonin gene-related peptide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0001525 angiogenesis;GO:0007166 cell surface receptor signaling pathway;GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3IRX3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IRZ4-1", "uniprot_id": "I3IRZ4_DANRE", "mass": 49382.0, "length": 438, "protein_name": "Delta(14)-sterol reductase TM7SF2", "gene_name": "si:ch1073-429i10.1", "organism": "Zebrafish", "refseq_name": "delta(14)-sterol reductase TM7SF2", "refseq_ac": "XP_002664803", "gene_names_uniprotkb": "si:ch1073-429i10.1", "gene_names_refseq": "si:ch1073-429i10.1", "protein_names_uniprotkb": "Delta(14)-sterol reductase TM7SF2; 1.3.1.70; 3-beta-hydroxysterol Delta (14)-reductase; C-14 sterol reductase; Delta-14-SR; Sterol C14-reductase; Transmembrane 7 superfamily member 2", "protein_names_refseq": "delta(14)-sterol reductase TM7SF2", "tax_id": 7955, "disease": "", "pathway": " (dre:100332057)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Catalyzes the reduction of the C14-unsaturated bond of lanosterol, as part of the metabolic pathway leading to cholesterol biosynthesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RHQ1", "ec_number_list": "1.3.1.70", "go_molecular_function": "GO:0050613 Delta14-sterol reductase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0005637 nuclear inner membrane", "go_biological_process": "GO:0006695 cholesterol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3IRZ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IS28-1", "uniprot_id": "I3IS28_DANRE", "mass": 63689.0, "length": 574, "protein_name": "Perforin-1", "gene_name": "prf1.7; prf1.8", "organism": "Zebrafish", "refseq_name": "perforin-1", "refseq_ac": "XP_003200648", "gene_names_uniprotkb": "prf1.7; prf1.8", "gene_names_refseq": "prf1.7", "protein_names_uniprotkb": "Perforin-1", "protein_names_refseq": "perforin-1", "tax_id": 7955, "disease": "non-Hodgkin lymphoma (Disease Ontology:DOID:0060060); familial hemophagocytic lymphohistiocytosis 2 (Disease Ontology:DOID:0110922); aplastic anemia (Disease Ontology:DOID:12449); Fanconi anemia (Disease Ontology:DOID:13636); colon carcinoma (Disease Ontology:DOID:1520); multiple sclerosis (Disease Ontology:DOID:2377); asthma (Disease Ontology:DOID:2841); membranoproliferative glomerulonephritis (Disease Ontology:DOID:2920); glomerulonephritis (Disease Ontology:DOID:2921); non-Langerhans-cell histiocytosis (Disease Ontology:DOID:4330); human immunodeficiency virus infectious disease (Disease Ontology:DOID:526); chronic fatigue syndrome (Disease Ontology:DOID:8544); Crohn's disease (Disease Ontology:DOID:8778); systemic lupus erythematosus (Disease Ontology:DOID:9074); type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": " (dre:100535230); (dre:103909247)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 15, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RT94;I3ISE1;I3ISI3", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding;GO:0022829 wide pore channel activity;GO:0140911 pore-forming activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0016020 membrane;GO:0005579 membrane attack complex", "go_biological_process": "GO:0051607 defense response to virus;GO:0031640 killing of cells of another organism;GO:0001913 T cell mediated cytotoxicity;GO:0001771 immunological synapse formation;GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3IS28-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IS33-1", "uniprot_id": "I3IS33_DANRE", "mass": 62081.0, "length": 566, "protein_name": "Synaptotagmin-C isoform X1", "gene_name": "syt3", "organism": "Zebrafish", "refseq_name": "synaptotagmin-C isoform X1", "refseq_ac": "XP_005164031", "gene_names_uniprotkb": "syt3", "gene_names_refseq": "syt3", "protein_names_uniprotkb": "Synaptotagmin-C isoform X1", "protein_names_refseq": "synaptotagmin-C isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100000615)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BBA9", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0005544 calcium-dependent phospholipid binding;GO:0000149 SNARE binding;GO:0061891 calcium ion sensor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse;GO:0030658 transport vesicle membrane;GO:0070382 exocytic vesicle", "go_biological_process": "GO:0007268 chemical synaptic transmission;GO:0016192 vesicle-mediated transport;GO:0031340 positive regulation of vesicle fusion;GO:0017158 regulation of calcium ion-dependent exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3IS33-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IS75-1", "uniprot_id": "I3IS75_DANRE", "mass": 46050.0, "length": 396, "protein_name": "XK-related protein", "gene_name": "xkr8.2", "organism": "Zebrafish", "refseq_name": "XK-related protein 8", "refseq_ac": "XP_001922809", "gene_names_uniprotkb": "xkr8.2", "gene_names_refseq": "xkr8.2", "protein_names_uniprotkb": "XK-related protein", "protein_names_refseq": "XK-related protein 8", "tax_id": 7955, "disease": "", "pathway": " (dre:100149957)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001922809.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QKT5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0043652 engulfment of apoptotic cell;GO:0070782 phosphatidylserine exposure on apoptotic cell surface;GO:1902742 apoptotic process involved in development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3IS75-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ISA6-1", "uniprot_id": "I3ISA6_DANRE", "mass": 611719.0, "length": 5476, "protein_name": "Epiplakin", "gene_name": "eppk1", "organism": "Zebrafish", "refseq_name": "epiplakin", "refseq_ac": "NP_001313413", "gene_names_uniprotkb": "eppk1; cb159; wu:fb54f07", "gene_names_refseq": "cb159; eppk1; wu:fb54f07", "protein_names_uniprotkb": "Epiplakin", "protein_names_refseq": "epiplakin", "tax_id": 7955, "disease": "", "pathway": " (dre:101885652)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;36658633", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01009757.1, GDQH01003545.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505389, SAMEA3505392 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Jun 25, 2025 this sequence version replaced NP_001313413.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2Q9", "ec_number_list": "", "go_molecular_function": "GO:1990254 keratin filament binding;GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0016020 membrane;GO:0030054 cell junction;GO:0070161 anchoring junction", "go_biological_process": "GO:0045110 intermediate filament bundle assembly;GO:0042060 wound healing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "I3ISA6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ISJ9-1", "uniprot_id": "I3ISJ9_DANRE", "mass": 35634.0, "length": 313, "protein_name": "Olfactory receptor", "gene_name": "or61c3", "organism": "Zebrafish", "refseq_name": "olfactory receptor 4B13", "refseq_ac": "XP_002666005", "gene_names_uniprotkb": "or61c3", "gene_names_refseq": "or61c3", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "olfactory receptor 4B13", "tax_id": 7955, "disease": "", "pathway": " (dre:100332319)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1REA8", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3ISJ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITK3-1", "uniprot_id": "I3ITK3_DANRE", "mass": 21046.0, "length": 189, "protein_name": "peptidyl-tRNA hydrolase", "gene_name": "si:dkey-19e4.5", "organism": "Zebrafish", "refseq_name": "UBA_like_SF and PTH2 domain-containing protein isoform 1", "refseq_ac": "NP_001313497", "gene_names_uniprotkb": "si:dkey-19e4.5; fb82g02; wu:fb82g02", "gene_names_refseq": "fb82g02; si:dkey-19e4.5; wu:fb82g02", "protein_names_uniprotkb": "peptidyl-tRNA hydrolase; 3.1.1.29", "protein_names_refseq": "UBA_like_SF and PTH2 domain-containing protein isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:570260)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.1755896.1, SRR26395050.288177.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505379, SAMEA3505385 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2U1", "ec_number_list": "3.1.1.29", "go_molecular_function": "GO:0004045 peptidyl-tRNA hydrolase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "I3ITK3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3IT91-1", "uniprot_id": "I3IT91_DANRE", "mass": 30538.0, "length": 275, "protein_name": "Paired box protein Pax-6", "gene_name": "pax10", "organism": "Zebrafish", "refseq_name": "Paired box 10", "refseq_ac": "NP_001373372", "gene_names_uniprotkb": "pax10; pax6l; zgc:193504; zgc:193533", "gene_names_refseq": "pax10a; pax10; pax6.2; pax6l; zgc:193504; zgc:193533", "protein_names_uniprotkb": "Paired box protein Pax-6", "protein_names_refseq": "Paired box 10; paired box gene 6-like; pax6 like", "tax_id": 7955, "disease": "", "pathway": " (dre:100192208)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "19221799;20937081;23359656;24951566", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588721.4029142.1, HF567440.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Nov 28, 2025 this sequence version replaced NP_001373372.1. Sequence Note:., [RefSeq]; Novel member PAX10 gene. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PFI1", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0060041 retina development in camera-type eye;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "I3IT91-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITH9-1", "uniprot_id": "I3ITH9_DANRE", "mass": 16342.0, "length": 146, "protein_name": "Centrosomal protein 20", "gene_name": "cep20", "organism": "Zebrafish", "refseq_name": "centrosomal protein 20", "refseq_ac": "NP_001313424", "gene_names_uniprotkb": "cep20; fopnl; for20; gb:eh445560", "gene_names_refseq": "cep20; fopnl; for20; gb:eh445560", "protein_names_uniprotkb": "Centrosomal protein 20; FGFR1OP N-terminal-like protein; LisH domain-containing protein FOPNL", "protein_names_refseq": "centrosomal protein 20; fgfr1op N-terminal like; lisH domain-containing protein C16orf63 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:567944); (R-DRE-380320); (R-DRE-5610787)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "26469318;30475641", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH445560.1, EH471435.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1 and EH445560.1. On May 19, 2016 this sequence version replaced XP_696350.3., [RefSeq]; Involved in the biogenesis of cilia. Required for the recruitment of PLK1 to centrosomes and S phase progression., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8Q1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0031514 motile cilium;GO:0034451 centriolar satellite;GO:0036064 ciliary basal body", "go_biological_process": "GO:0060271 cilium assembly;GO:0007368 determination of left/right symmetry;GO:0034453 microtubule anchoring", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "I3ITH9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITI5-1", "uniprot_id": "I3ITI5_DANRE", "mass": 57211.0, "length": 527, "protein_name": "Monocarboxylate transporter 7", "gene_name": "slc16a6b", "organism": "Zebrafish", "refseq_name": "solute carrier family 16 member 6b", "refseq_ac": "NP_001352167", "gene_names_uniprotkb": "slc16a6b; fb51h06; wu:fb51h06", "gene_names_refseq": "fb51h06; slc16a6b; wu:fb51h06", "protein_names_uniprotkb": "Monocarboxylate transporter 7; Monocarboxylate transporter 6; Solute carrier family 16 member 6", "protein_names_refseq": "solute carrier family 16 (monocarboxylic acid transporters), member 6b; solute carrier family 16 member 6b", "tax_id": 7955, "disease": "", "pathway": " (dre:561766)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "17961207;22302940;26469318;28694436", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01023492.1, GDQH01004225.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Aug 10, 2018 this sequence version replaced XP_690266.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Monocarboxylate transporter selective for taurine. May associate with BSG/CD147 or EMB/GP70 ancillary proteins to mediate facilitative efflux or influx of taurine across the plasma membrane. The transport is pH- and sodium-independent. Rather low-affinity, is likely effective for taurine transport in tissues where taurine is present at high concentrations., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEU2", "ec_number_list": "", "go_molecular_function": "GO:0008028 monocarboxylic acid transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "I3ITI5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITL1-1", "uniprot_id": "I3ITL1_DANRE", "mass": 44552.0, "length": 394, "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "organism": "Zebrafish", "refseq_name": "gap junction protein isoform X1", "refseq_ac": "XP_005166273", "gene_names_uniprotkb": "gjc4a.2; si:dkey-91f15.1", "gene_names_refseq": "gjc4a.2; si:dkey-91f15.1", "protein_names_uniprotkb": "Gap junction protein", "protein_names_refseq": "gap junction protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100034658)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "28252024;35325106", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BDL7;A0AC58JPU7", "ec_number_list": "", "go_molecular_function": "GO:0005243 gap junction channel activity", "go_cellular_component": "GO:0005922 connexin complex", "go_biological_process": "GO:0007267 cell-cell signaling;GO:0007154 cell communication", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "I3ITL1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITL5-1", "uniprot_id": "I3ITL5_DANRE", "mass": 233262.0, "length": 2041, "protein_name": "Unconventional myosin-X isoform X1", "gene_name": "myo10l1", "organism": "Zebrafish", "refseq_name": "unconventional myosin-X isoform X1", "refseq_ac": "XP_001924041", "gene_names_uniprotkb": "myo10l1", "gene_names_refseq": "myo10l1", "protein_names_uniprotkb": "Unconventional myosin-X isoform X1", "protein_names_refseq": "unconventional myosin-X isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:566674)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001924041.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QRE2", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding;GO:0005524 ATP binding;GO:0003774 cytoskeletal motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016459 myosin complex;GO:0044295 axonal growth cone", "go_biological_process": "GO:0048675 axon extension", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3ITL5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITP3-1", "uniprot_id": "I3ITP3_DANRE", "mass": 15471.0, "length": 137, "protein_name": "Myelin basic protein", "gene_name": "mbpa", "organism": "Zebrafish", "refseq_name": "myelin basic protein isoform X1", "refseq_ac": "XP_001340316", "gene_names_uniprotkb": "mbpa", "gene_names_refseq": "mbpa", "protein_names_uniprotkb": "Myelin basic protein", "protein_names_refseq": "myelin basic protein isoform X1", "tax_id": 7955, "disease": "multiple sclerosis (Disease Ontology:DOID:2377)", "pathway": " (dre:326281)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_001340316.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PZE1", "ec_number_list": "", "go_molecular_function": "GO:0019911 structural constituent of myelin sheath", "go_cellular_component": "GO:0005886 plasma membrane;GO:0043209 myelin sheath", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I3ITP3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I3ITQ2-1", "uniprot_id": "I3ITQ2_DANRE", "mass": 31410.0, "length": 272, "protein_name": "Cilia- and flagella-associated protein 300", "gene_name": "cfap300", "organism": "Zebrafish", "refseq_name": "cilia- and flagella-associated protein 300", "refseq_ac": "NP_001070813", "gene_names_uniprotkb": "cfap300; bZ1P14.7; si:rp71-1p14.7; zgc:153619", "gene_names_refseq": "bZ1P14.7; cfap300; si:rp71-1p14.7; zgc:153619", "protein_names_uniprotkb": "Cilia- and flagella-associated protein 300", "protein_names_refseq": "cilia- and flagella-associated protein 300", "tax_id": 7955, "disease": "primary ciliary dyskinesia 38 (Disease Ontology:DOID:0111852)", "pathway": " (dre:497149)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12477932", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124708.1, EH456933.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476749, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On or before Nov 25, 2014 this sequence version replaced XP_005161309.1, NP_001070813.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Cilium- and flagellum-specific protein that plays a role in axonemal structure organization and motility. May play a role in outer and inner dynein arm assembly., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA87", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005930 axoneme", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "I3ITQ2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "I6L846-1", "uniprot_id": "I6L846_DANRE", "mass": 52421.0, "length": 469, "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "dnaaf3l", "organism": "Zebrafish", "refseq_name": "dynein axonemal assembly factor 3", "refseq_ac": "XP_003201392", "gene_names_uniprotkb": "dnaaf3l", "gene_names_refseq": "dnaaf3l", "protein_names_uniprotkb": "Dynein axonemal assembly factor 3", "protein_names_refseq": "dynein axonemal assembly factor 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100536527)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Required for the assembly of axonemal inner and outer dynein arms. Involved in preassembly of dyneins into complexes before their transport into cilia., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RPB5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0120293 dynein axonemal particle", "go_biological_process": "GO:0044458 motile cilium assembly;GO:0070286 axonemal dynein complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "I6L846-1", "record_type": "protein" }, { "uniprot_canonical_ac": "K7DY99-1", "uniprot_id": "K7DY99_DANRE", "mass": 95262.0, "length": 839, "protein_name": "Tetratricopeptide repeat protein 27", "gene_name": "ttc27", "organism": "Zebrafish", "refseq_name": "tetratricopeptide repeat protein 27", "refseq_ac": "NP_775392", "gene_names_uniprotkb": "ttc27; chunp6906; flj20272l; hi1257; im:7158386; wu:fj40h09", "gene_names_refseq": "chunp6906; flj20272l; hi1257; im:7158386; ttc27; wu:fj40h09", "protein_names_uniprotkb": "Tetratricopeptide repeat protein 27", "protein_names_refseq": "tetratricopeptide repeat protein 27", "tax_id": 7955, "disease": "", "pathway": " (dre:317640)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "12006978;22056673;26469318;27189481;34162866", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001521.1, SRR32588734.313983.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Jun 25, 2025 this sequence version replaced NP_775392.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P826", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "K7DY99-1", "record_type": "protein" }, { "uniprot_canonical_ac": "K7DYB2-1", "uniprot_id": "K7DYB2_DANRE", "mass": 53146.0, "length": 465, "protein_name": "Sulfotransferase", "gene_name": "chst2b", "organism": "Zebrafish", "refseq_name": "carbohydrate sulfotransferase 2", "refseq_ac": "XP_001923604", "gene_names_uniprotkb": "chst2b", "gene_names_refseq": "chst2b", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "carbohydrate sulfotransferase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100006249); (R-DRE-2022854)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_001923604.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QRB1", "ec_number_list": "2.8.2.-", "go_molecular_function": "GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0006044 N-acetylglucosamine metabolic process;GO:0006954 inflammatory response;GO:0005975 carbohydrate metabolic process;GO:0006790 sulfur compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "K7DYB2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "K7DYE4-1", "uniprot_id": "K7DYE4_DANRE", "mass": 21186.0, "length": 193, "protein_name": "Transcription factor 15", "gene_name": "si:ch211-246m6.4", "organism": "Zebrafish", "refseq_name": "transcription factor 15", "refseq_ac": "XP_001340709", "gene_names_uniprotkb": "si:ch211-246m6.4", "gene_names_refseq": "si:ch211-246m6.4", "protein_names_uniprotkb": "Transcription factor 15", "protein_names_refseq": "transcription factor 15", "tax_id": 7955, "disease": "", "pathway": " (dre:100000527)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q1X2", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0014706 striated muscle tissue development;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0032502 developmental process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "K7DYE4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "M9MM93-1", "uniprot_id": "M9MM93_DANRE", "mass": 26003.0, "length": 234, "protein_name": "H-2 class II histocompatibility antigen, A-U alpha chain", "gene_name": "mhc2d8.46a", "organism": "Zebrafish", "refseq_name": "H-2 class II histocompatibility antigen, A-U alpha chain", "refseq_ac": "XP_699949", "gene_names_uniprotkb": "mhc2d8.46a", "gene_names_refseq": "mhc2d8.46a", "protein_names_uniprotkb": "H-2 class II histocompatibility antigen, A-U alpha chain", "protein_names_refseq": "H-2 class II histocompatibility antigen, A-U alpha chain", "tax_id": 7955, "disease": "", "pathway": " (dre:571282); (R-DRE-2132295)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_699949.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVQ1", "ec_number_list": "", "go_molecular_function": "GO:0023026 MHC class II protein complex binding;GO:0042605 peptide antigen binding", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0042613 MHC class II protein complex", "go_biological_process": "GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II;GO:0002503 peptide antigen assembly with MHC class II protein complex;GO:0002250 adaptive immune response;GO:0050870 positive regulation of T cell activation;GO:0050778 positive regulation of immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "M9MM93-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P112-1", "uniprot_id": "RGL1_DANRE", "mass": 89690.0, "length": 804, "protein_name": "Ral guanine nucleotide dissociation stimulator-like 1", "gene_name": "rgl1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "rgl1; zgc:77299", "gene_names_refseq": "", "protein_names_uniprotkb": "Ral guanine nucleotide dissociation stimulator-like 1; RalGDS-like 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:402933); (R-DRE-5673001)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "15520368;17055577;19240133;25247677;36229514", "class_list": "", "function": "Probable guanine nucleotide exchange factor., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007265 Ras protein signal transduction;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6P112-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8JFQ2-1", "uniprot_id": "RBTN1_DANRE", "mass": 17711.0, "length": 155, "protein_name": "Rhombotin-1", "gene_name": "lmo1", "organism": "Zebrafish", "refseq_name": "rhombotin-1 isoform 1", "refseq_ac": "NP_775326", "gene_names_uniprotkb": "lmo1; cb524; etID41074.7; lmo1b; wu:fb76g02; zgc:109794", "gene_names_refseq": "cb524; etID41074.7; lmo1b; lmo1; wu:fb76g02; zgc:109794", "protein_names_uniprotkb": "Rhombotin-1; LIM domain only protein 1; LMO-1", "protein_names_refseq": "LIM domain only protein 1; rhombotin-1 isoform 1; rhombotin-1", "tax_id": 7955, "disease": "", "pathway": " (dre:280646); (R-DRE-8939236)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "14516683;15827121;16109975;17252014;18850331;28327131;28867147;28974511;31787979;37183825", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01014563.1, GDQQ01030887.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; May be involved in gene regulation within neural lineage cells potentially by direct DNA binding or by binding to other transcription factors., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8JFQ2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZYZ6-1", "uniprot_id": "DLGP1_DANRE", "mass": 110828.0, "length": 999, "protein_name": "Disks large-associated protein 1", "gene_name": "dlgap1a; dlgap1", "organism": "Zebrafish", "refseq_name": "disks large-associated protein 1", "refseq_ac": "NP_001189384", "gene_names_uniprotkb": "dlgap1a; dlgap1; dlgap1; si:zc142h2.3", "gene_names_refseq": "dlgap1a; dlgap1; si:zc142h2.3", "protein_names_uniprotkb": "Disks large-associated protein 1; DAP-1; Guanylate kinase-associated protein", "protein_names_refseq": "DAP-1; discs, large homolog-associated protein 1; discs, large-associated protein 1; disks large-associated protein 1; guanylate kinase-associated protein", "tax_id": 7955, "disease": "", "pathway": " (dre:569898)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from JBMGRA010000002.1. On or before Jan 30, 2011 this sequence version replaced XP_698406.2, XP_001338873.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Part of the postsynaptic scaffold in neuronal cells., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005886 plasma membrane;GO:0014069 postsynaptic density;GO:0099572 postsynaptic specialization", "go_biological_process": "GO:0050804 modulation of chemical synaptic transmission;GO:0023052 signaling", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZYZ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6AXL5-1", "uniprot_id": "HBAP1_DANRE", "mass": 50992.0, "length": 449, "protein_name": "HSPB1-associated protein 1 homolog", "gene_name": "hspbap1", "organism": "Zebrafish", "refseq_name": "HSPB1-associated protein 1 homolog", "refseq_ac": "NP_001003777", "gene_names_uniprotkb": "hspbap1; si:dkey-25l23.5; zgc:100975", "gene_names_refseq": "hspbap1; zgc:100975", "protein_names_uniprotkb": "HSPB1-associated protein 1 homolog", "protein_names_refseq": "HSPB1-associated protein 1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:445320)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC079489.1, EH540277.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC079489.1., [RefSeq]; May play a role in cellular stress response., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0S6T4", "ec_number_list": "", "go_molecular_function": "GO:0016706 2-oxoglutarate-dependent dioxygenase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6AXL5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T370-1", "uniprot_id": "CDV3_DANRE", "mass": 26229.0, "length": 236, "protein_name": "Protein CDV3 homolog", "gene_name": "cdv3", "organism": "Zebrafish", "refseq_name": "protein CDV3 homolog", "refseq_ac": "NP_997886", "gene_names_uniprotkb": "cdv3; fc34e05; wu:fa12e09; wu:fb78g07; wu:fc34e05; wu:fi31e11", "gene_names_refseq": "cdv3; fc34e05; wu:fa12e09; wu:fb78g07; wu:fc34e05; wu:fi31e11", "protein_names_uniprotkb": "Protein CDV3 homolog", "protein_names_refseq": "protein CDV3 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:334102)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053231.1, GW710472.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053231.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T370-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SXT7-1", "uniprot_id": "ZC21A_DANRE", "mass": 35849.0, "length": 327, "protein_name": "Zinc finger C2HC domain-containing protein 1A", "gene_name": "zc2hc1a", "organism": "Zebrafish", "refseq_name": "zinc finger C2HC domain-containing protein 1A", "refseq_ac": "NP_955974", "gene_names_uniprotkb": "zc2hc1a; fam164a; fc28a05; wu:fc28a05; zgc:63810", "gene_names_refseq": "fam164a; fc28a05; wu:fc28a05; zc2hc1a; zgc:63810", "protein_names_uniprotkb": "Zinc finger C2HC domain-containing protein 1A", "protein_names_refseq": "family with sequence similarity 164, member A; protein FAM164A; zinc finger C2HC domain-containing protein 1A", "tax_id": 7955, "disease": "", "pathway": " (dre:324412)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055250.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055250.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7SXT7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T2D0-1", "uniprot_id": "SGSM3_DANRE", "mass": 86319.0, "length": 755, "protein_name": "Small G protein signaling modulator 3", "gene_name": "sgsm3", "organism": "Zebrafish", "refseq_name": "small G protein signaling modulator 3", "refseq_ac": "NP_998495", "gene_names_uniprotkb": "sgsm3; rutbc3; wu:fa11c02; zgc:64026", "gene_names_refseq": "rutbc3; sgsm3; wu:fa11c02; zgc:64026", "protein_names_uniprotkb": "Small G protein signaling modulator 3; RUN and TBC1 domain-containing protein 3", "protein_names_refseq": "RUN and TBC1 domain containing 3; RUN and TBC1 domain-containing protein 3; small G protein signaling modulator 3", "tax_id": 7955, "disease": "", "pathway": " (dre:406635)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054597.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054597.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T2D0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUF2-1", "uniprot_id": "BRD9_DANRE", "mass": 71542.0, "length": 631, "protein_name": "Bromodomain-containing protein 9", "gene_name": "brd9", "organism": "Zebrafish", "refseq_name": "bromodomain-containing protein 9", "refseq_ac": "NP_956569", "gene_names_uniprotkb": "brd9; zgc:55797", "gene_names_refseq": "brd9; zgc:55797", "protein_names_uniprotkb": "Bromodomain-containing protein 9", "protein_names_refseq": "bromodomain-containing protein 9", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:393245); (R-DRE-9933947)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049140.2 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049140.2. On Jul 6, 2005 this sequence version replaced XP_702268.1., [RefSeq]; Plays a role in chromatin remodeling and regulation of transcription. Acts as a chromatin reader that recognizes and binds acylated histones: binds histones that are acetylated and/or butyrylated., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0140566 histone reader activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZUF2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYU6-1", "uniprot_id": "MIDN_DANRE", "mass": 54873.0, "length": 509, "protein_name": "Midnolin", "gene_name": "midn", "organism": "Zebrafish", "refseq_name": "midnolin", "refseq_ac": "NP_996935", "gene_names_uniprotkb": "midn; ch211-79c14.1; fc07f11; wu:fc07f11; zgc:77423", "gene_names_refseq": "fc07f11; midn; wu:fc07f11; zgc:77423", "protein_names_uniprotkb": "Midnolin; Midbrain nucleolar protein", "protein_names_refseq": "midbrain nucleolar protein; midnolin", "tax_id": 7955, "disease": "", "pathway": " (dre:323713)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066456.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066456.1., [RefSeq]; Facilitates ubiquitin-independent proteasomal degradation of polycomb protein CBX4. Plays a role in inhibiting the activity of glucokinase GCK and both glucose-induced and basal insulin secretion., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005829 cytosol", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NYU6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUV7-1", "uniprot_id": "EMSY_DANRE", "mass": 122200.0, "length": 1173, "protein_name": "BRCA2-interacting transcriptional repressor EMSY", "gene_name": "emsy", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "emsy; fj36b04; wu:fj36b04; zgc:56039", "gene_names_refseq": "", "protein_names_uniprotkb": "BRCA2-interacting transcriptional repressor EMSY", "protein_names_refseq": "", "tax_id": 7955, "disease": "asthma (Disease Ontology:DOID:2841); allergic rhinitis (Disease Ontology:DOID:4481)", "pathway": " (dre:335889)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Regulator which is able to repress transcription, possibly via its interaction with a multiprotein chromatin remodeling complex that modifies the chromatin., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005634 nucleus", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZUV7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM86-1", "uniprot_id": "GRD2I_DANRE", "mass": 113629.0, "length": 1009, "protein_name": "Delphilin", "gene_name": "grid2ipb; grid2ip", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "grid2ipb; grid2ip; grid2ip; si:ch211-147h1.3; zC147H1.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Delphilin; Glutamate receptor, ionotropic, delta 2-interacting protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:559717)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;28252024", "class_list": "", "function": "Postsynaptic scaffolding protein., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0045211 postsynaptic membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6ZM86-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803W1-1", "uniprot_id": "SCRN3_DANRE", "mass": 46974.0, "length": 417, "protein_name": "Secernin-3", "gene_name": "scrn3", "organism": "Zebrafish", "refseq_name": "secernin-3", "refseq_ac": "NP_956032", "gene_names_uniprotkb": "scrn3; wu:fd60b06; zgc:55430", "gene_names_refseq": "scrn3; wu:fd60b06; zgc:55430", "protein_names_uniprotkb": "Secernin-3", "protein_names_refseq": "secernin-3", "tax_id": 7955, "disease": "", "pathway": " (dre:326058)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044168.1, BC065907.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505378 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044168.1., [RefSeq]; Plays a role in thermal nociception., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0016805 dipeptidase activity;GO:0070004 cysteine-type exopeptidase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803W1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P6Y1-1", "uniprot_id": "RELCH_DANRE", "mass": 132131.0, "length": 1189, "protein_name": "RAB11-binding protein RELCH homolog", "gene_name": "relch", "organism": "Zebrafish", "refseq_name": "RAB11-binding protein RELCH homolog", "refseq_ac": "NP_957138", "gene_names_uniprotkb": "relch; zgc:66014", "gene_names_refseq": "relch; zgc:66014", "protein_names_uniprotkb": "RAB11-binding protein RELCH homolog; LisH domain and HEAT repeat-containing protein KIAA1468; RAB11-binding and LisH domain, coiled-coil and HEAT repeat-containing protein RELCH", "protein_names_refseq": "RAB11-binding and LisH domain, coiled-coil and HEAT repeat-containing protein RELCH; RAB11-binding protein RELCH homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:393817)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC061956.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC061956.1. On Jul 6, 2005 this sequence version replaced XP_692731.1., [RefSeq]; May regulate intracellular cholesterol transport., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0055037 recycling endosome;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0032367 intracellular cholesterol transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P6Y1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SYD9-1", "uniprot_id": "INT6_DANRE", "mass": 99866.0, "length": 892, "protein_name": "Integrator complex subunit 6", "gene_name": "ints6l", "organism": "Zebrafish", "refseq_name": "integrator complex subunit 6", "refseq_ac": "NP_956728", "gene_names_uniprotkb": "ints6l; ddx26b; ints6; zgc:63527", "gene_names_refseq": "ddx26b; ints6l; ints6; zgc:63527", "protein_names_uniprotkb": "Integrator complex subunit 6; Int6", "protein_names_refseq": "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B; int6; integrator complex subunit 6", "tax_id": 7955, "disease": "", "pathway": " (dre:393406)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054905.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476733, SAMEA4476739 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054905.1., [RefSeq]; Component of the integrator complex, a multiprotein complex that terminates RNA polymerase II (Pol II) transcription in the promoter-proximal region of genes. The integrator complex provides a quality checkpoint during transcription elongation by driving premature transcription termination of transcripts that are unfavorably configured for transcriptional elongation: the complex terminates transcription by (1) catalyzing dephosphorylation of the C-terminal domain (CTD) of Pol II subunit POLR2A/RPB1 and SUPT5H/SPT5, (2) degrading the exiting nascent RNA transcript via endonuclease activity and (3) promoting the release of Pol II from bound DNA. The integrator complex is also involved in terminating the synthesis of non-coding Pol II transcripts, such as enhancer RNAs (eRNAs), small nuclear RNAs (snRNAs), telomerase RNAs and long non-coding RNAs (lncRNAs). Within the integrator complex, INTS6 acts as a molecular adapter that promotes assembly of protein phosphatase 2A (PP2A) subunits to the integrator core complex, promoting recruitment of PP2A to transcription pause-release checkpoint., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin;GO:0032039 integrator complex;GO:0160232 INTAC complex", "go_biological_process": "GO:0071168 protein localization to chromatin;GO:0034472 snRNA 3'-end processing;GO:0160240 RNA polymerase II transcription initiation surveillance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7SYD9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P0C6-1", "uniprot_id": "LHPL2_DANRE", "mass": 24163.0, "length": 225, "protein_name": "LHFPL tetraspan subfamily member 2a protein", "gene_name": "lhfpl2a", "organism": "Zebrafish", "refseq_name": "LHFPL tetraspan subfamily member 2a protein", "refseq_ac": "NP_991226", "gene_names_uniprotkb": "lhfpl2a; lhfpl2; zgc:77456", "gene_names_refseq": "lhfpl2a; lhfpl2; zgc:77456", "protein_names_uniprotkb": "LHFPL tetraspan subfamily member 2a protein", "protein_names_refseq": "LHFPL tetraspan subfamily member 2a protein; lipoma HMGIC fusion partner-like 2 protein pseudogene; lipoma HMGIC fusion partner-like 2a", "tax_id": 7955, "disease": "", "pathway": " (dre:402962); (R-DRE-114608)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065671.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065671.1., [RefSeq]; Plays a role in fertility. Involved in distal reproductive tract development., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0007338 single fertilization;GO:0046545 development of primary female sexual characteristics;GO:0046546 development of primary male sexual characteristics;GO:1905516 positive regulation of fertilization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P0C6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBU5-1", "uniprot_id": "GRT1A_DANRE", "mass": 41623.0, "length": 356, "protein_name": "Growth hormone-regulated TBC protein 1-A", "gene_name": "grtp1a", "organism": "Zebrafish", "refseq_name": "growth hormone-regulated TBC protein 1-A", "refseq_ac": "NP_998567", "gene_names_uniprotkb": "grtp1a; grtp1; wu:fd05h02; zgc:73241", "gene_names_refseq": "grtp1a; grtp1; wu:fd05h02; zgc:73241", "protein_names_uniprotkb": "Growth hormone-regulated TBC protein 1-A", "protein_names_refseq": "growth hormone regulated TBC protein 1; growth hormone-regulated TBC protein 1-A", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162); Ewing sarcoma (Disease Ontology:DOID:3369)", "pathway": " (dre:406711)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059581.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059581.1. On Apr 16, 2011 this sequence version replaced XP_003197652.1., [RefSeq]; May act as a GTPase-activating protein for Rab family protein(s)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBU5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T2B9-1", "uniprot_id": "MTPN_DANRE", "mass": 12749.0, "length": 118, "protein_name": "Myotrophin", "gene_name": "mtpn", "organism": "Zebrafish", "refseq_name": "myotrophin", "refseq_ac": "NP_998137", "gene_names_uniprotkb": "mtpn; wu:fa10f07; zgc:64078", "gene_names_refseq": "mtpn; wu:fa10f07; zgc:64078", "protein_names_uniprotkb": "Myotrophin", "protein_names_refseq": "myotrophin", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763); hypertrophic cardiomyopathy (Disease Ontology:DOID:11984); dilated cardiomyopathy (Disease Ontology:DOID:12930); congestive heart failure (Disease Ontology:DOID:6000)", "pathway": " (dre:406240)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154009.1, SRR26395039.481589.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505382, SAMEA3505389 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1, EH440876.1, EB940788.1 and EH524721.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Regulates NF-kappa-B transcription factor activity. Promotes growth of cardiomyocytes, but not cardiomyocyte proliferation. Promotes cardiac muscle hypertrophy. Plays a role in the regulation of the growth of actin filaments. Inhibits the activity of the F-actin-capping protein complex (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:2000812 regulation of barbed-end actin filament capping;GO:0010613 positive regulation of cardiac muscle hypertrophy", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T2B9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PC91-1", "uniprot_id": "BT3L4_DANRE", "mass": 17361.0, "length": 158, "protein_name": "Transcription factor BTF3 homolog 4", "gene_name": "btf3l4", "organism": "Zebrafish", "refseq_name": "transcription factor BTF3 homolog 4", "refseq_ac": "NP_956988", "gene_names_uniprotkb": "btf3l4; zgc:73053", "gene_names_refseq": "btf3l4; zgc:73053", "protein_names_uniprotkb": "Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4", "protein_names_refseq": "transcription factor BTF3 homolog 4", "tax_id": 7955, "disease": "", "pathway": " (dre:393667)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH448447.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059432.1. On or before Jul 6, 2005 this sequence version replaced XP_709858.1, XP_686988.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PC91-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SXC6-1", "uniprot_id": "SLAIL_DANRE", "mass": 63285.0, "length": 585, "protein_name": "SLAIN motif-containing protein-like", "gene_name": "fd58c02", "organism": "Zebrafish", "refseq_name": "SLAIN motif-containing protein-like", "refseq_ac": "NP_956029", "gene_names_uniprotkb": "fd58c02; wu:fd58c02; zgc:66447", "gene_names_refseq": "fd58c02; wu:fd58c02; zgc:66447", "protein_names_uniprotkb": "SLAIN motif-containing protein-like", "protein_names_refseq": "SLAIN motif-containing protein-like", "tax_id": 7955, "disease": "", "pathway": " (dre:326023)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055660.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055660.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A7YYH2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0007020 microtubule nucleation;GO:0031116 positive regulation of microtubule polymerization;GO:0031122 cytoplasmic microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7SXC6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHS9-1", "uniprot_id": "S2548_DANRE", "mass": 34107.0, "length": 309, "protein_name": "Solute carrier family 25 member 48", "gene_name": "slc25a48", "organism": "Zebrafish", "refseq_name": "solute carrier family 25 member 48", "refseq_ac": "NP_001002367", "gene_names_uniprotkb": "slc25a48; zgc:92090", "gene_names_refseq": "slc25a48; zgc:92090", "protein_names_uniprotkb": "Solute carrier family 25 member 48", "protein_names_refseq": "putative mitochondrial carrier protein FLJ44862 homolog; solute carrier family 25 member 48", "tax_id": 7955, "disease": "", "pathway": " (dre:436640)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075888.1, CK028683.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505378 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075888.1., [RefSeq]; Mitochondrial transporter that mediates choline import across the inner mitochondrial membrane, thereby regulating mitochondrial choline levels and downstream metabolism, including betaine and purine nucleotide synthesis. Plays a key role in mitochondrial respiration, brown fat thermogenesis, and the maintenance of mitochondrial membrane integrity., [UniProtKB, UniProtKB]; Mitochondrial transporter that transports choline across the inner mitochondrial membrane., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0015220 choline transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0015871 choline transport;GO:0055085 transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DHS9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZVP1-1", "uniprot_id": "JADE3_DANRE", "mass": 89044.0, "length": 795, "protein_name": "Protein Jade-3", "gene_name": "jade3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "jade3; phf16; wu:fb53c02", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein Jade-3; Jade family PHD finger protein 3; PHD finger protein 16", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:322209); (R-DRE-3214847)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "14612400;16109975;17069464;24240475;26469318;27009152", "class_list": "", "function": "Scaffold subunit of some HBO1 complexes, which have a histone H4 acetyltransferase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0140566 histone reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000123 histone acetyltransferase complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q7ZVP1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803R2-1", "uniprot_id": "CCZ1_DANRE", "mass": 55895.0, "length": 480, "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "ccz1", "organism": "Zebrafish", "refseq_name": "vacuolar fusion protein CCZ1 homolog", "refseq_ac": "NP_956428", "gene_names_uniprotkb": "ccz1; zgc:55344", "gene_names_refseq": "ccz1; zgc:55344", "protein_names_uniprotkb": "Vacuolar fusion protein CCZ1 homolog", "protein_names_refseq": "CCZ1 homolog, vacuolar protein trafficking and biogenesis associated; CCZ1 vacuolar protein trafficking and biogenesis associated homolog; vacuolar fusion protein CCZ1 homolog", "tax_id": 7955, "disease": "Hermansky-Pudlak syndrome (Disease Ontology:DOID:3753)", "pathway": " (dre:393103); (R-DRE-8876198)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044374.1, BC152682.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044374.1. On Jul 6, 2005 this sequence version replaced XP_687747.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0035658 Mon1-Ccz1 complex", "go_biological_process": "GO:0007034 vacuolar transport;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803R2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q66I73-1", "uniprot_id": "MLRSB_DANRE", "mass": 19123.0, "length": 170, "protein_name": "Myosin regulatory light chain 2, skeletal muscle isoform B", "gene_name": "mylpfb", "organism": "Zebrafish", "refseq_name": "myosin regulatory light chain 2, skeletal muscle isoform B", "refseq_ac": "NP_001004668", "gene_names_uniprotkb": "mylpfb; zgc:103639", "gene_names_refseq": "mylpfb; zgc:103639", "protein_names_uniprotkb": "Myosin regulatory light chain 2, skeletal muscle isoform B", "protein_names_refseq": "myosin regulatory light chain 2, skeletal muscle isoform B; myosin regulatory light chain 2, skeletal muscle", "tax_id": 7955, "disease": "hypertrophic cardiomyopathy 10 (Disease Ontology:DOID:0110316); distal arthrogryposis type 1C (Disease Ontology:DOID:0112190)", "pathway": " (dre:447930)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081501.1, CN327368.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081501.1. On Jul 6, 2005 this sequence version replaced XP_700038.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016459 myosin complex", "go_biological_process": "GO:0033275 actin-myosin filament sliding;GO:0007519 skeletal muscle tissue development;GO:0060415 muscle tissue morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q66I73-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q66I84-1", "uniprot_id": "DCC1_DANRE", "mass": 44656.0, "length": 391, "protein_name": "Sister chromatid cohesion protein DCC1", "gene_name": "dscc1", "organism": "Zebrafish", "refseq_name": "sister chromatid cohesion protein DCC1", "refseq_ac": "NP_001004611", "gene_names_uniprotkb": "dscc1; dcc1; zgc:103507", "gene_names_refseq": "dscc1; zgc:103507", "protein_names_uniprotkb": "Sister chromatid cohesion protein DCC1; Defective in sister chromatid cohesion protein 1 homolog", "protein_names_refseq": "defective in sister chromatid cohesion 1 homolog; defective in sister chromatid cohesion protein 1 homolog; sister chromatid cohesion protein DCC1", "tax_id": 7955, "disease": "", "pathway": " (dre:447872); (R-DRE-174411)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081483.1, BC165209.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081483.1., [RefSeq]; Loads pcna onto primed templates regulating velocity, spacing and restart activity of replication forks. May couple DNA replication to sister chromatid cohesion (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0000775 chromosome, centromeric region;GO:0000785 chromatin;GO:0031390 Ctf18 RFC-like complex", "go_biological_process": "GO:0006260 DNA replication;GO:0006275 regulation of DNA replication;GO:0034088 maintenance of mitotic sister chromatid cohesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q66I84-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q66I85-1", "uniprot_id": "YJU2B_DANRE", "mass": 43768.0, "length": 390, "protein_name": "Probable splicing factor YJU2B", "gene_name": "yju2b", "organism": "Zebrafish", "refseq_name": "probable splicing factor YJU2B", "refseq_ac": "NP_991158", "gene_names_uniprotkb": "yju2b; ccdc130; zgc:103496", "gene_names_refseq": "ccdc130; yju2b; zgc:103496", "protein_names_uniprotkb": "Probable splicing factor YJU2B; Coiled-coil domain-containing protein 130", "protein_names_refseq": "coiled-coil domain containing 130; coiled-coil domain-containing protein 130 homolog; probable splicing factor YJU2B", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081482.1, AY391438.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1, EH546621.1 and EH567761.1. On Oct 15, 2015 this sequence version replaced NP_991158.1., [RefSeq]; May be involved in mRNA splicing., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6TNS9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0071014 post-mRNA release spliceosomal complex;GO:0005684 U2-type spliceosomal complex", "go_biological_process": "GO:0045292 mRNA cis splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q66I85-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q66IC8-1", "uniprot_id": "DYLT5_DANRE", "mass": 19982.0, "length": 173, "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "dynlt5", "organism": "Zebrafish", "refseq_name": "dynein light chain Tctex-type 5", "refseq_ac": "NP_001004623", "gene_names_uniprotkb": "dynlt5; tctex1d1; zgc:101774", "gene_names_refseq": "dynlt5; tctex1d1; zgc:101774", "protein_names_uniprotkb": "Dynein light chain Tctex-type 5; Tctex1 domain-containing protein 1", "protein_names_refseq": "Tctex1 domain containing 1; dynein light chain Tctex-type 5; tctex1 domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:447884)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081403.1, CN019804.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081403.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0045505 dynein intermediate chain binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005868 cytoplasmic dynein complex", "go_biological_process": "GO:0060271 cilium assembly;GO:0007018 microtubule-based movement", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q66IC8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q66IC9-1", "uniprot_id": "ROP1L_DANRE", "mass": 24171.0, "length": 218, "protein_name": "Ropporin-1-like protein", "gene_name": "ropn1l", "organism": "Zebrafish", "refseq_name": "ropporin-1-like protein", "refseq_ac": "NP_001004624", "gene_names_uniprotkb": "ropn1l; asp; bZ1F1.7; si:rp71-1f1.7; zgc:101773", "gene_names_refseq": "asp; bZ1F1.7; ropn1l; si:rp71-1f1.7; zgc:101773", "protein_names_uniprotkb": "Ropporin-1-like protein", "protein_names_refseq": "A-kinase anchoring protein-associated sperm protein; AKAP-associated sperm protein; ropporin 1-like; ropporin-1-like protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081402.1, BC152162.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081402.1. On or before Aug 25, 2007 this sequence version replaced XP_001336162.1, XP_001336234.1., [RefSeq]; Functions as part of axonemal radial spoke complexes that play an important part in the motility of sperm and cilia. Important for male fertility. Involved in fibrous sheath integrity and sperm motility, plays a role in PKA-dependent signaling processes required for spermatozoa capacitation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7T169", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0001534 radial spoke;GO:0005737 cytoplasm;GO:0031514 motile cilium", "go_biological_process": "GO:0030317 flagellated sperm motility;GO:0007286 spermatid development;GO:0048240 sperm capacitation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q66IC9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q66ID3-1", "uniprot_id": "SPOUT_DANRE", "mass": 42925.0, "length": 381, "protein_name": "28S rRNA (uridine-N(3))-methyltransferase", "gene_name": "spout1", "organism": "Zebrafish", "refseq_name": "28S rRNA (uridine-N(3))-methyltransferase", "refseq_ac": "NP_001004627", "gene_names_uniprotkb": "spout1; cb90; zgc:101748", "gene_names_refseq": "CENP-32; cb90; sb:cb90; spout1; zgc:101748", "protein_names_uniprotkb": "28S rRNA (uridine-N(3))-methyltransferase; 2.1.1.-; CENP-32; Centromere protein 32; Kinetochore-associated protein; SPOUT domain-containing methyltransferase 1", "protein_names_refseq": "28S rRNA (uridine-N(3))-methyltransferase; centromere protein 32; kinetochore-associated protein; putative methyltransferase C9orf114 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:447888)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;39962046", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081398.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081398.1., [RefSeq]; S-adenosyl-L-methionine-dependent RNA methyltransferase. Specifically methylates the N3 position of a uridine in 28S rRNA. Required for association of the centrosomes with the poles of the bipolar mitotic spindle during metaphase, ensuring proper spindle organization. Also involved in chromosome alignment. Binds specifically to miRNA MIR145 hairpin, regulates MIR145 expression at a postranscriptional level., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N2E4", "ec_number_list": "2.1.1.-", "go_molecular_function": "GO:0008168 methyltransferase activity;GO:0035198 miRNA binding", "go_cellular_component": "GO:0000776 kinetochore;GO:0031616 spindle pole centrosome;GO:0072686 mitotic spindle", "go_biological_process": "GO:0098900 regulation of action potential;GO:0051301 cell division;GO:0051661 maintenance of centrosome location;GO:0035196 miRNA processing;GO:0006364 rRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q66ID3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q66L58-1", "uniprot_id": "VAC14_DANRE", "mass": 87557.0, "length": 771, "protein_name": "Protein VAC14 homolog", "gene_name": "vac14", "organism": "Zebrafish", "refseq_name": "protein VAC14 homolog", "refseq_ac": "NP_001004650", "gene_names_uniprotkb": "vac14; fb68e05; wu:fb68e05; zgc:100945", "gene_names_refseq": "fb68e05; vac14; wu:fb68e05; zgc:100945", "protein_names_uniprotkb": "Protein VAC14 homolog", "protein_names_refseq": "protein VAC14 homolog", "tax_id": 7955, "disease": "striatonigral degeneration (Disease Ontology:DOID:4751)", "pathway": " (dre:447912)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078425.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078425.1. On or before Jul 6, 2005 this sequence version replaced XP_707499.1, XP_707500.1, XP_684407.1, XP_707501.1, XP_707502.1, XP_707503.1, XP_707504.1., [RefSeq]; Scaffold protein component of the PI(3,5)P2 regulatory complex which regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Pentamerizes into a star-shaped structure and nucleates the assembly of the complex. The pentamer binds a single copy each of PIKFYVE and FIG4 and coordinates both PIKfyve kinase activity and FIG4 phosphatase activity, being required to maintain normal levels of phosphatidylinositol 3-phosphate (PtdIns(3)P) and phosphatidylinositol 5-phosphate (PtdIns(5)P). Plays a role in the biogenesis of endosome carrier vesicles (ECV) / multivesicular bodies (MVB) transport intermediates from early endosomes., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0010008 endosome membrane;GO:0070772 PAS complex", "go_biological_process": "GO:0006661 phosphatidylinositol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q66L58-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6AXJ7-1", "uniprot_id": "F199X_DANRE", "mass": 41883.0, "length": 374, "protein_name": "Protein FAM199X", "gene_name": "fam199x", "organism": "Zebrafish", "refseq_name": "protein FAM199X", "refseq_ac": "NP_001003766", "gene_names_uniprotkb": "fam199x; zgc:101060", "gene_names_refseq": "fam199x; zgc:101060", "protein_names_uniprotkb": "Protein FAM199X", "protein_names_refseq": "protein FAM199X", "tax_id": 7955, "disease": "", "pathway": " (dre:445309)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC079509.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC079509.1. On Jul 6, 2005 this sequence version replaced XP_695388.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6AXJ7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6AXL8-1", "uniprot_id": "ZMAT5_DANRE", "mass": 20310.0, "length": 173, "protein_name": "Zinc finger matrin-type protein 5", "gene_name": "zmat5", "organism": "Zebrafish", "refseq_name": "zinc finger matrin-type protein 5", "refseq_ac": "NP_001003771", "gene_names_uniprotkb": "zmat5; zgc:101022", "gene_names_refseq": "zgc:101022; zmat5", "protein_names_uniprotkb": "Zinc finger matrin-type protein 5; U11/U12 small nuclear ribonucleoprotein 20 kDa protein; U11/U12 snRNP 20 kDa protein", "protein_names_refseq": "U11/U12 small nuclear ribonucleoprotein 20 kDa protein; U11/U12 snRNP 20 kDa protein; zinc finger matrin-type protein 5", "tax_id": 7955, "disease": "", "pathway": " (dre:445314); (R-DRE-72165)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC079486.1, EH543820.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC079486.1. On Jul 6, 2005 this sequence version replaced XP_701554.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005689 U12-type spliceosomal complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6AXL8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6AZB8-1", "uniprot_id": "HARB1_DANRE", "mass": 39329.0, "length": 349, "protein_name": "Putative nuclease HARBI1", "gene_name": "harbi1", "organism": "Zebrafish", "refseq_name": "putative nuclease HARBI1", "refseq_ac": "NP_001003734", "gene_names_uniprotkb": "harbi1; zgc:91866", "gene_names_refseq": "flj32675; harbi1; zgc:91866", "protein_names_uniprotkb": "Putative nuclease HARBI1; 3.1.-.-; Harbinger transposase-derived nuclease", "protein_names_refseq": "harbinger transposase-derived nuclease; putative nuclease HARBI1", "tax_id": 7955, "disease": "", "pathway": " (dre:445279)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15169610", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078390.1, BC100116.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078390.1., [RefSeq]; Transposase-derived protein that may have nuclease activity (Potential). Does not have transposase activity (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q498Q5", "ec_number_list": "", "go_molecular_function": "GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004518 nuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6AZB8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6AZD1-1", "uniprot_id": "T179A_DANRE", "mass": 26382.0, "length": 232, "protein_name": "Transmembrane protein 179", "gene_name": "tmem179", "organism": "Zebrafish", "refseq_name": "transmembrane protein 179", "refseq_ac": "NP_001003767", "gene_names_uniprotkb": "tmem179; si:dkey-85n7.1; zgc:101058", "gene_names_refseq": "tmem179aa; tmem179; zgc:101058", "protein_names_uniprotkb": "Transmembrane protein 179", "protein_names_refseq": "transmembrane protein 179", "tax_id": 7955, "disease": "", "pathway": " (dre:445310)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078227.1, EH593084.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078227.1. On Jul 6, 2005 this sequence version replaced XP_701551.1., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6AZD1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6AZW1-1", "uniprot_id": "KISHB_DANRE", "mass": 8342.0, "length": 74, "protein_name": "Protein kish-B", "gene_name": "tmem167b", "organism": "Zebrafish", "refseq_name": "protein kish-B precursor", "refseq_ac": "NP_001003761", "gene_names_uniprotkb": "tmem167b; zgc:101127", "gene_names_refseq": "im:6906967; tmem167b; zgc:101127", "protein_names_uniprotkb": "Protein kish-B; Transmembrane protein 167B", "protein_names_refseq": "protein kish-B precursor; protein kish-B", "tax_id": 7955, "disease": "", "pathway": " (dre:445304)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01041017.1, SRR26395017.962189.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Jul 6, 2005 this sequence version replaced XP_701545.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Involved in the early part of the secretory pathway., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6AZW1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DBR9-1", "uniprot_id": "KXDL1_DANRE", "mass": 20374.0, "length": 182, "protein_name": "KxDL motif-containing protein 1", "gene_name": "kxd1", "organism": "Zebrafish", "refseq_name": "kxDL motif-containing protein 1", "refseq_ac": "NP_001003469", "gene_names_uniprotkb": "kxd1; zgc:91862", "gene_names_refseq": "kxd1; zgc:91862", "protein_names_uniprotkb": "KxDL motif-containing protein 1", "protein_names_refseq": "UPF0459 protein C19orf50 homolog; kxDL motif-containing protein 1", "tax_id": 7955, "disease": "Hermansky-Pudlak syndrome (Disease Ontology:DOID:3753)", "pathway": " (dre:445075)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC150446.1, GFIL01014199.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1 and BC078391.1. On Dec 3, 2010 this sequence version replaced NP_001093913.1., [RefSeq]; As part of a BORC-like complex may play a role in lysosomes movement and localization at the cell periphery. Associated with the cytosolic face of lysosomes, this complex may couple lysosomes to microtubule plus-end-directed kinesin motor. May also be involved in the biogenesis of lysosome-related organelles such as melanosomes., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0099078 BORC complex", "go_biological_process": "GO:0016192 vesicle-mediated transport;GO:0032418 lysosome localization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DBR9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DBT3-1", "uniprot_id": "TXD17_DANRE", "mass": 14193.0, "length": 123, "protein_name": "Thioredoxin domain-containing protein 17", "gene_name": "txndc17", "organism": "Zebrafish", "refseq_name": "thioredoxin domain-containing protein 17", "refseq_ac": "NP_001003456", "gene_names_uniprotkb": "txndc17; txnl5; zgc:91920", "gene_names_refseq": "txndc17; txnl5; zgc:91920", "protein_names_uniprotkb": "Thioredoxin domain-containing protein 17; Thioredoxin-like protein 5", "protein_names_refseq": "clot; thioredoxin domain-containing protein 17; thioredoxin-like 5; thioredoxin-like protein 5", "tax_id": 7955, "disease": "", "pathway": " (dre:445062)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078373.1, EH544836.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476782 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078373.1., [RefSeq]; Disulfide reductase. May participate in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyze dithiol-disulfide exchange reactions. Has peroxidase activity and may contribute to the elimination of cellular hydrogen peroxide (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0047134 protein-disulfide reductase [NAD(P)H] activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6DBT3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DBU1-1", "uniprot_id": "P15LA_DANRE", "mass": 12167.0, "length": 110, "protein_name": "Proline-rich protein 15-like protein A", "gene_name": "prr15la", "organism": "Zebrafish", "refseq_name": "proline-rich protein 15-like protein A", "refseq_ac": "NP_001003478", "gene_names_uniprotkb": "prr15la; atad4a; fj24c06; wu:fj24c06; zgc:91833", "gene_names_refseq": "atad4a; fj24c06; prr15la; wu:fj24c06; zgc:91833", "protein_names_uniprotkb": "Proline-rich protein 15-like protein A; Protein ATAD4-A", "protein_names_refseq": "ATPase family, AAA domain containing 4a; cb1069; proline-rich protein 15-like protein A; protein atad4-A", "tax_id": 7955, "disease": "", "pathway": " (dre:445084)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078363.1, GDQH01000740.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Aug 20, 2025 this sequence version replaced NP_001003478.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045666 positive regulation of neuron differentiation;GO:0045746 negative regulation of Notch signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DBU1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DBW1-1", "uniprot_id": "RG1BB_DANRE", "mass": 55441.0, "length": 475, "protein_name": "Ras-GEF domain-containing family member 1B-B", "gene_name": "rasgef1bb", "organism": "Zebrafish", "refseq_name": "ras-GEF domain-containing family member 1B-B", "refseq_ac": "NP_001003479", "gene_names_uniprotkb": "rasgef1bb; fc34e01; im:7136415; rasgef; wu:fc34e01; zgc:91814", "gene_names_refseq": "fc34e01; im:7136415; rasgef1bb; rasgef; wu:fc34e01; zgc:91814", "protein_names_uniprotkb": "Ras-GEF domain-containing family member 1B-B", "protein_names_refseq": "ras-GEF domain-containing family member 1B-B", "tax_id": 7955, "disease": "", "pathway": " (dre:445085)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "17239665", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078340.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078340.1., [RefSeq]; Guanine nucleotide exchange factor (GEF) for Ras family proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007265 Ras protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DBW1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DBX1-1", "uniprot_id": "MED20_DANRE", "mass": 23318.0, "length": 212, "protein_name": "Mediator of RNA polymerase II transcription subunit 20", "gene_name": "med20", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 20", "refseq_ac": "NP_001003585", "gene_names_uniprotkb": "med20; MED20; si:rp71-11b17.6; trfp; zgc:101043", "gene_names_refseq": "med20; trfp; zgc:101043", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 20; Mediator complex subunit 20; TRF-proximal protein homolog", "protein_names_refseq": "TRF-proximal protein homolog; Trf (TATA binding protein-related factor)-proximal homolog; mediator of RNA polymerase II transcription subunit 20", "tax_id": 7955, "disease": "", "pathway": " (dre:445191)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078327.1, EH508522.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078327.1. On Jul 6, 2005 this sequence version replaced XP_701483.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1MTK2", "ec_number_list": "", "go_molecular_function": "GO:0003713 transcription coactivator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DBX1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DC37-1", "uniprot_id": "HNMT_DANRE", "mass": 33619.0, "length": 292, "protein_name": "Histamine N-methyltransferase", "gene_name": "hnmt", "organism": "Zebrafish", "refseq_name": "histamine N-methyltransferase", "refseq_ac": "NP_001003636", "gene_names_uniprotkb": "hnmt; HMT; zgc:100917", "gene_names_refseq": "HMT; hnmt; zgc:100917", "protein_names_uniprotkb": "Histamine N-methyltransferase; 2.1.1.8; HMT", "protein_names_refseq": "histamine N-methyltransferase", "tax_id": 7955, "disease": "autosomal recessive intellectual developmental disorder 51 (Disease Ontology:DOID:0081214); Pick's disease (Disease Ontology:DOID:11870); Huntington's disease (Disease Ontology:DOID:12858); Down syndrome (Disease Ontology:DOID:14250); Parkinson's disease (Disease Ontology:DOID:14330); asthma (Disease Ontology:DOID:2841); atopic dermatitis (Disease Ontology:DOID:3310); brain infarction (Disease Ontology:DOID:3454); essential tremor (Disease Ontology:DOID:4990); ulcerative colitis (Disease Ontology:DOID:8577)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH540529.1, CK682686.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1., [RefSeq]; Inactivates histamine by N-methylation. Plays an important role in degrading histamine and in regulating the airway response to histamine., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 10, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.1.1.8", "go_molecular_function": "GO:0046539 histamine N-methyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0032259 methylation;GO:0001695 histamine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DC37-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DC53-1", "uniprot_id": "CTU2_DANRE", "mass": 55825.0, "length": 501, "protein_name": "Cytoplasmic tRNA 2-thiolation protein 2", "gene_name": "ctu2", "organism": "Zebrafish", "refseq_name": "cytoplasmic tRNA 2-thiolation protein 2", "refseq_ac": "NP_001003560", "gene_names_uniprotkb": "ctu2; CTU2; NCS2; ncs2; zgc:101113", "gene_names_refseq": "ctu2; ncs2; zgc:101113", "protein_names_uniprotkb": "Cytoplasmic tRNA 2-thiolation protein 2", "protein_names_refseq": "cytoplasmic tRNA 2-thiolation protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:445166)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "19017811;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01007628.1, BC078233.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505382, SAMEA3505390 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Aug 18, 2023 this sequence version replaced NP_001003560.1., [RefSeq]; Identifies a similar human protein that is involved in tRNA modification., [RefSeq, PubMed]; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with ctu1/atpbd3 that ligates sulfur from thiocarboxylated urm1 onto the uridine of tRNAs at wobble position., [UniProtKB, HAMAP, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QNK0", "ec_number_list": "", "go_molecular_function": "GO:0016783 sulfurtransferase activity;GO:0000049 tRNA binding;GO:0016779 nucleotidyltransferase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005737 cytoplasm", "go_biological_process": "GO:0002143 tRNA wobble position uridine thiolation;GO:0034227 tRNA thio-modification;GO:0002098 tRNA wobble uridine modification;GO:0032447 protein urmylation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6DC53-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DC58-1", "uniprot_id": "TM223_DANRE", "mass": 28081.0, "length": 248, "protein_name": "Transmembrane protein 223", "gene_name": "tmem223", "organism": "Zebrafish", "refseq_name": "transmembrane protein 223", "refseq_ac": "NP_001003594", "gene_names_uniprotkb": "tmem223; zgc:101024", "gene_names_refseq": "tmem223; zgc:101024", "protein_names_uniprotkb": "Transmembrane protein 223", "protein_names_refseq": "transmembrane protein 223", "tax_id": 7955, "disease": "", "pathway": " (dre:445200)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078226.1, EH547016.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078226.1. On Jul 6, 2005 this sequence version replaced XP_701491.1., [RefSeq]; Mitochondrial ribosome-associated protein involved in the first steps of cytochrome c oxidase complex (complex IV) biogenesis. Stimulates the translation of MT-CO1 mRNA and is a constituent of early MT-CO1 assembly intermediates., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0097177 mitochondrial ribosome binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0033617 mitochondrial respiratory chain complex IV assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DC58-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DC77-1", "uniprot_id": "MPRGB_DANRE", "mass": 39519.0, "length": 347, "protein_name": "Membrane progestin receptor gamma-B", "gene_name": "paqr5b", "organism": "Zebrafish", "refseq_name": "membrane progestin receptor gamma-B", "refseq_ac": "NP_001003573", "gene_names_uniprotkb": "paqr5b; zgc:101065", "gene_names_refseq": "paqr5b; zgc:101065", "protein_names_uniprotkb": "Membrane progestin receptor gamma-B; Progestin and adipoQ receptor family member V-B; mPR gamma-B", "protein_names_refseq": "mPR gamma-B; membrane progestin receptor gamma-B; progestin and adipoQ receptor family member V-B", "tax_id": 7955, "disease": "", "pathway": " (dre:100007661)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "39420013", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078202.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC078202.1. On Jul 6, 2005 this sequence version replaced XP_701475.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Membrane progesterone receptor gamma (paqr5b) is essential for the formation of neurons in the zebrafish olfactory rosette. Publication Status: Online-Only, [RefSeq, PubMed]; Steroid membrane receptor. Binds progesterone. May be involved in oocyte maturation (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005496 steroid binding;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0048477 oogenesis;GO:0021772 olfactory bulb development", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DC77-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DEH7-1", "uniprot_id": "Q6DEH7_DANRE", "mass": 34234.0, "length": 297, "protein_name": "NEK6-subfamily protein kinase", "gene_name": "nek7", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase Nek7", "refseq_ac": "NP_001003617", "gene_names_uniprotkb": "nek7; wu:fj68f02; zgc:100962; zgc:92175", "gene_names_refseq": "nek7; wu:fj68f02; zgc:100962; zgc:92175", "protein_names_uniprotkb": "NEK6-subfamily protein kinase; 2.7.11.34", "protein_names_refseq": "NIMA (never in mitosis gene a)-related kinase 7; serine/threonine-protein kinase Nek7", "tax_id": 7955, "disease": "", "pathway": " (dre:445223)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "15520368;26469318;34671088", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081618.1, BC077138.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081618.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6NXJ5;Q1LWV2", "ec_number_list": "", "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0000922 spindle pole;GO:0005634 nucleus;GO:0005813 centrosome", "go_biological_process": "GO:1900227 positive regulation of NLRP3 inflammasome complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6DEH7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DEJ5-1", "uniprot_id": "AASD1_DANRE", "mass": 45517.0, "length": 412, "protein_name": "Alanyl-tRNA editing protein Aarsd1", "gene_name": "aarsd1", "organism": "Zebrafish", "refseq_name": "alanyl-tRNA editing protein Aarsd1", "refseq_ac": "NP_001003572", "gene_names_uniprotkb": "aarsd1; zgc:101066", "gene_names_refseq": "aarsd1; im:7152658; zgc:101066", "protein_names_uniprotkb": "Alanyl-tRNA editing protein Aarsd1; Alanyl-tRNA synthetase domain-containing protein 1", "protein_names_refseq": "alanyl-tRNA editing protein Aarsd1; alanyl-tRNA synthetase domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:445178)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC077118.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC077118.1., [RefSeq]; Functions in trans to edit the amino acid moiety from incorrectly charged tRNA(Ala)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0002196 Ser-tRNA(Ala) deacylase activity;GO:0004812 aminoacyl-tRNA ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006412 translation;GO:0043039 tRNA aminoacylation;GO:0006450 regulation of translational fidelity", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DEJ5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DEM5-1", "uniprot_id": "TIM8A_DANRE", "mass": 10563.0, "length": 90, "protein_name": "Mitochondrial import inner membrane translocase subunit Tim8 A", "gene_name": "timm8a", "organism": "Zebrafish", "refseq_name": "mitochondrial import inner membrane translocase subunit Tim8 A", "refseq_ac": "NP_001003637", "gene_names_uniprotkb": "timm8a; tim8a; zgc:100916", "gene_names_refseq": "im:6896085; timm8a; zgc:100916", "protein_names_uniprotkb": "Mitochondrial import inner membrane translocase subunit Tim8 A", "protein_names_refseq": "mitochondrial import inner membrane translocase subunit Tim8 A", "tax_id": 7955, "disease": "deafness-dystonia-optic neuronopathy syndrome (Disease Ontology:DOID:0050757); dystonia (Disease Ontology:DOID:543)", "pathway": " (dre:445243)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01005917.1, BC077084.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space. The TIMM8-TIMM13 complex mediates the import of some proteins while the predominant TIMM9-TIMM10 70 kDa complex mediates the import of much more proteins (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0015031 protein transport;GO:0072655 establishment of protein localization to mitochondrion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DEM5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DEN0-1", "uniprot_id": "UFC1_DANRE", "mass": 19117.0, "length": 166, "protein_name": "Ubiquitin-fold modifier-conjugating enzyme 1", "gene_name": "ufc1", "organism": "Zebrafish", "refseq_name": "ubiquitin-fold modifier-conjugating enzyme 1", "refseq_ac": "NP_001003650", "gene_names_uniprotkb": "ufc1; dkey-71l1.2; zgc:100800", "gene_names_refseq": "ufc1; zgc:100800", "protein_names_uniprotkb": "Ubiquitin-fold modifier-conjugating enzyme 1; Ufm1-conjugating enzyme 1", "protein_names_refseq": "ubiquitin-fold modifier-conjugating enzyme 1; ufm1-conjugating enzyme 1", "tax_id": 7955, "disease": "neurodevelopmental disorder with spasticity and poor growth (Disease Ontology:DOID:0070421)", "pathway": " (dre:445256)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC077079.1, EH589940.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC077079.1., [RefSeq]; E2-like enzyme which specifically catalyzes the second step in ufmylation. Accepts the ubiquitin-like modifier UFM1 from the E1 enzyme UBA5 and forms an intermediate with UFM1 via a thioester linkage. Ufmylation is involved in various processes, such as ribosome recycling, response to DNA damage, interferon response or reticulophagy (also called ER-phagy)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0071568 UFM1 transferase activity;GO:0061657 UFM1 conjugating enzyme activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0034976 response to endoplasmic reticulum stress;GO:0071569 protein ufmylation;GO:0061709 reticulophagy", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6DEN0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DFZ6-1", "uniprot_id": "NOT1B_DANRE", "mass": 15809.0, "length": 139, "protein_name": "Inactive palmitoleoyl-protein carboxylesterase notum1b", "gene_name": "notum1b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "notum1b; zgc:92474", "gene_names_refseq": "", "protein_names_uniprotkb": "Inactive palmitoleoyl-protein carboxylesterase notum1b", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:436917)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "22669824;23594743;27189481;35111746;36823429", "class_list": "", "function": "Probable inactive palmitoleoyl-protein carboxylesterase., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:1990699 palmitoleyl hydrolase activity;GO:0016787 hydrolase activity", "go_cellular_component": "", "go_biological_process": "GO:1990697 protein depalmitoleylation;GO:0030178 negative regulation of Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6DFZ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DG19-1", "uniprot_id": "MFSD5_DANRE", "mass": 52789.0, "length": 481, "protein_name": "Solute carrier family 61 member 1", "gene_name": "slc61a1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "slc61a1; mfsd5; zgc:91807", "gene_names_refseq": "", "protein_names_uniprotkb": "Solute carrier family 61 member 1; Major facilitator superfamily domain-containing protein 5; Molybdate transporter 2 homolog; Molybdate-anion transporter", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:436986)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Mediates high-affinity intracellular uptake of the rare oligo-element molybdenum., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0015098 molybdate ion transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006811 monoatomic ion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DG19-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DG32-1", "uniprot_id": "S2536_DANRE", "mass": 34505.0, "length": 311, "protein_name": "Solute carrier family 25 member 36-A", "gene_name": "slc25a36a", "organism": "Zebrafish", "refseq_name": "solute carrier family 25 member 36-A", "refseq_ac": "NP_001002667", "gene_names_uniprotkb": "slc25a36a; si:dkeyp-90g12.1; zgc:92447", "gene_names_refseq": "slc25a36a; zgc:92447", "protein_names_uniprotkb": "Solute carrier family 25 member 36-A", "protein_names_refseq": "DKEYP-90G12.1; solute carrier family 25 (pyrimidine nucleotide carrier), member 36a; solute carrier family 25 member 36-A", "tax_id": 7955, "disease": "familial hyperinsulinemic hypoglycemia 8 (Disease Ontology:DOID:0081328)", "pathway": " (dre:436940)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076521.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076521.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0S7H5", "ec_number_list": "", "go_molecular_function": "GO:0015218 pyrimidine nucleotide transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:1990519 pyrimidine nucleotide import into mitochondrion", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DG32-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DG43-1", "uniprot_id": "UBTD2_DANRE", "mass": 26723.0, "length": 240, "protein_name": "Ubiquitin domain-containing protein 2", "gene_name": "ubtd2", "organism": "Zebrafish", "refseq_name": "ubiquitin domain-containing protein 2", "refseq_ac": "NP_001002718", "gene_names_uniprotkb": "ubtd2; zgc:91797", "gene_names_refseq": "ubtd2; zgc:91797", "protein_names_uniprotkb": "Ubiquitin domain-containing protein 2", "protein_names_refseq": "ubiquitin domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:436991)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076510.1, EH590780.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC076510.1 and EH608257.1. On Nov 7, 2015 this sequence version replaced NP_001002718.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DG43-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DG91-1", "uniprot_id": "PSMG1_DANRE", "mass": 30727.0, "length": 277, "protein_name": "Proteasome assembly chaperone 1", "gene_name": "psmg1", "organism": "Zebrafish", "refseq_name": "proteasome assembly chaperone 1", "refseq_ac": "NP_001002714", "gene_names_uniprotkb": "psmg1; wu:fl12g04; wu:fu18c08; zgc:91806", "gene_names_refseq": "dscr2; psmg1; wu:fl12g04; wu:fu18c08; zgc:91806", "protein_names_uniprotkb": "Proteasome assembly chaperone 1", "protein_names_refseq": "Down syndrome critical region gene 2; proteasome assembly chaperone 1", "tax_id": 7955, "disease": "", "pathway": " (dre:436987); (R-DRE-9907900)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076460.1, EH443222.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076460.1. On Jul 6, 2005 this sequence version replaced XP_699519.1., [RefSeq]; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0070628 proteasome binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0080129 proteasome core complex assembly;GO:0051131 chaperone-mediated protein complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DG91-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DG99-1", "uniprot_id": "KCTD6_DANRE", "mass": 27632.0, "length": 237, "protein_name": "BTB/POZ domain-containing protein KCTD6", "gene_name": "kctd6", "organism": "Zebrafish", "refseq_name": "BTB/POZ domain-containing protein KCTD6", "refseq_ac": "NP_001002329", "gene_names_uniprotkb": "kctd6; zgc:91884", "gene_names_refseq": "kctd6b; kctd6; zgc:91884", "protein_names_uniprotkb": "BTB/POZ domain-containing protein KCTD6", "protein_names_refseq": "BTB/POZ domain-containing protein KCTD6; potassium channel tetramerisation domain containing 6b; potassium channel tetramerisation domain containing 6", "tax_id": 7955, "disease": "", "pathway": " (dre:436601); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076452.1, EH589276.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076452.1., [RefSeq]; Probable substrate-specific adapter of a cullin-containing E3 ubiquitin-protein ligase complex mediating the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DG99-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGA7-1", "uniprot_id": "CYBC1_DANRE", "mass": 23376.0, "length": 206, "protein_name": "Cytochrome b-245 chaperone 1 homolog", "gene_name": "cybc1", "organism": "Zebrafish", "refseq_name": "cytochrome b-245 chaperone 1 homolog", "refseq_ac": "NP_001002669", "gene_names_uniprotkb": "cybc1; eros; zgc:91940", "gene_names_refseq": "cybc1; zgc:91940", "protein_names_uniprotkb": "Cytochrome b-245 chaperone 1 homolog; Eros; Essential for reactive oxygen species protein", "protein_names_refseq": "cytochrome b-245 chaperone 1 homolog; eros; essential for reactive oxygen species protein; uncharacterized protein C17orf62 homolog", "tax_id": 7955, "disease": "autosomal recessive chronic granulomatous disease 5 (Disease Ontology:DOID:0070368)", "pathway": " (dre:436942)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076444.1, EV757870.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076444.1., [RefSeq]; Functions as a chaperone necessary for a stable expression of the CYBA and CYBB subunits of the cytochrome b-245 heterodimer., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0045087 innate immune response;GO:0045728 respiratory burst after phagocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGA7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGI3-1", "uniprot_id": "NOP16_DANRE", "mass": 20228.0, "length": 171, "protein_name": "Nucleolar protein 16", "gene_name": "nop16", "organism": "Zebrafish", "refseq_name": "nucleolar protein 16", "refseq_ac": "NP_001002534", "gene_names_uniprotkb": "nop16; zgc:92910", "gene_names_refseq": "nop16; zgc:92910", "protein_names_uniprotkb": "Nucleolar protein 16", "protein_names_refseq": "nucleolar protein 16", "tax_id": 7955, "disease": "", "pathway": " (dre:436807)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076362.1, EH554279.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476750 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076362.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0042273 ribosomal large subunit biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGI3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGJ3-1", "uniprot_id": "TIM13_DANRE", "mass": 10621.0, "length": 95, "protein_name": "Mitochondrial import inner membrane translocase subunit Tim13", "gene_name": "timm13", "organism": "Zebrafish", "refseq_name": "mitochondrial import inner membrane translocase subunit Tim13", "refseq_ac": "NP_001002465", "gene_names_uniprotkb": "timm13; tim13a; timm13a; zgc:92895", "gene_names_refseq": "fd44h11; timm13; wu:fd44h11; zgc:92895", "protein_names_uniprotkb": "Mitochondrial import inner membrane translocase subunit Tim13", "protein_names_refseq": "mitochondrial import inner membrane translocase subunit Tim13", "tax_id": 7955, "disease": "deafness-dystonia-optic neuronopathy syndrome (Disease Ontology:DOID:0050757)", "pathway": " (dre:436738)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076351.1, EH597391.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476750, SAMEA4476754 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1 and EH499699.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space. The TIMM8-TIMM13 complex mediates the import of some proteins while the predominant TIMM9-TIMM10 70 kDa complex mediates the import of much more proteins (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0042719 mitochondrial intermembrane space chaperone complex;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0015031 protein transport;GO:0045039 protein insertion into mitochondrial inner membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGJ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGL2-1", "uniprot_id": "KBRS2_DANRE", "mass": 21913.0, "length": 192, "protein_name": "NF-kappa-B inhibitor-interacting Ras-like protein 2", "gene_name": "nkiras2", "organism": "Zebrafish", "refseq_name": "NF-kappa-B inhibitor-interacting Ras-like protein 2", "refseq_ac": "NP_001003433", "gene_names_uniprotkb": "nkiras2; zgc:92870", "gene_names_refseq": "nkiras2; zgc:92870", "protein_names_uniprotkb": "NF-kappa-B inhibitor-interacting Ras-like protein 2; I-kappa-B-interacting Ras-like protein 2; Kappa B-Ras protein 2; KappaB-Ras2", "protein_names_refseq": "I-kappa-B-interacting Ras-like protein 2; NF-kappa-B inhibitor-interacting Ras-like protein 2; kappa B-Ras protein 2; kappaB-Ras2", "tax_id": 7955, "disease": "", "pathway": " (dre:445039)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076330.1, CN501705.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505387 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076330.1., [RefSeq]; Atypical Ras-like protein that acts as a potent regulator of NF-kappa-B activity by preventing the degradation of NF-kappa-B inhibitor beta (NFKBIB) by most signals, explaining why NFKBIB is more resistant to degradation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0032794 GTPase activating protein binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043124 negative regulation of canonical NF-kappaB signal transduction;GO:0032484 Ral protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGL2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGL8-1", "uniprot_id": "RT15_DANRE", "mass": 30991.0, "length": 263, "protein_name": "Small ribosomal subunit protein uS15m", "gene_name": "mrps15", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein uS15m", "refseq_ac": "NP_001002485", "gene_names_uniprotkb": "mrps15; zgc:92862", "gene_names_refseq": "mrps15; zgc:92862", "protein_names_uniprotkb": "Small ribosomal subunit protein uS15m; 28S ribosomal protein S15, mitochondrial; MRP-S15; S15mt", "protein_names_refseq": "28S ribosomal protein S15, mitochondrial; MRP-S15; S15mt; small ribosomal subunit protein uS15m", "tax_id": 7955, "disease": "", "pathway": " (dre:436758); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076324.1, EH549609.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505381 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076324.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005763 mitochondrial small ribosomal subunit", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGL8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGM1-1", "uniprot_id": "UBAD1_DANRE", "mass": 16787.0, "length": 155, "protein_name": "UBA-like domain-containing protein 1", "gene_name": "ubald1", "organism": "Zebrafish", "refseq_name": "UBA-like domain-containing protein 1", "refseq_ac": "NP_001002488", "gene_names_uniprotkb": "ubald1; fam100a; zgc:92858", "gene_names_refseq": "fam100aa; fam100a; ubald1a; ubald1; zgc:92858", "protein_names_uniprotkb": "UBA-like domain-containing protein 1", "protein_names_refseq": "UBA-like domain-containing protein 1; f100a; family with sequence similarity 100, member Aa; protein FAM100A", "tax_id": 7955, "disease": "", "pathway": " (dre:794012)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01042474.1, GDQH01001235.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476797, SAMEA4476805 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On or before Jun 26, 2025 this sequence version replaced XP_009304943.1, XP_001333097.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGM1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGM3-1", "uniprot_id": "RM15_DANRE", "mass": 33392.0, "length": 296, "protein_name": "Large ribosomal subunit protein uL15m", "gene_name": "mrpl15", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein uL15m precursor", "refseq_ac": "NP_001003435", "gene_names_uniprotkb": "mrpl15; zgc:92856", "gene_names_refseq": "mrpl15; zgc:92856", "protein_names_uniprotkb": "Large ribosomal subunit protein uL15m; 39S ribosomal protein L15, mitochondrial; L15mt; MRP-L15", "protein_names_refseq": "39S ribosomal protein L15, mitochondrial; L15mt; MRP-L15; large ribosomal subunit protein uL15m precursor; large ribosomal subunit protein uL15m", "tax_id": 7955, "disease": "DiGeorge syndrome (Disease Ontology:DOID:11198)", "pathway": " (dre:445041); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076318.1, EH502876.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505376, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076318.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGM3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGM8-1", "uniprot_id": "JDP2_DANRE", "mass": 17915.0, "length": 156, "protein_name": "Jun dimerization protein 2", "gene_name": "jdp2", "organism": "Zebrafish", "refseq_name": "jun dimerization protein 2", "refseq_ac": "NP_001002493", "gene_names_uniprotkb": "jdp2; si:ch211-153j24.2; zgc:92851", "gene_names_refseq": "fk87c02; jdp2b; jdp2; wu:fk87c02; zgc:92851", "protein_names_uniprotkb": "Jun dimerization protein 2", "protein_names_refseq": "jun dimerization protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:436766)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23594743;24582561;27713415", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076313.1, CK398708.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076313.1. Sequence Note: This sequence has been modified as follows: removed 29 bp suspected to be vector contamination from the 3' end. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Component of the AP-1 transcription factor that represses transactivation mediated by the Jun family of proteins., [UniProtKB]; The authors identify Jdp2 as a key endoglin-dependent Wnt target, sufficient to establish haematopoietic fate in early mesoderm when BMP and Wnt crosstalk is disturbed. Publication Status: Online-Only, [RefSeq, PubMed]; The kinase fragment of DCLK is translocated into the nucleus upon hyperosmotic stresses and the kinase efficiently phosphorylates JDP2, a possible target in the nucleus, with the aid of histones, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6DGM8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGN0-1", "uniprot_id": "RERGL_DANRE", "mass": 23225.0, "length": 205, "protein_name": "Ras-related and estrogen-regulated growth inhibitor-like protein A", "gene_name": "rergla", "organism": "Zebrafish", "refseq_name": "ras-related and estrogen-regulated growth inhibitor-like protein", "refseq_ac": "NP_001002494", "gene_names_uniprotkb": "rergla; zgc:92849", "gene_names_refseq": "rergla; rergl; zgc:92849", "protein_names_uniprotkb": "Ras-related and estrogen-regulated growth inhibitor-like protein A; 3.6.5.2; RERG/Ras-like protein", "protein_names_refseq": "RERG/Ras-like protein; ras-related and estrogen-regulated growth inhibitor-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:436767)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076311.1, CK355095.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076311.1., [RefSeq]; Binds GDP/GTP and may possess intrinsic GTPase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "3.6.5.2;3.6.5.3;3.6.5.5;3.6.1.5;3.6.5.-;3.6.1.-;3.6.5.4", "go_molecular_function": "GO:0005525 GTP binding;GO:0003925 G protein activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGN0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGP2-1", "uniprot_id": "SYF2_DANRE", "mass": 28309.0, "length": 238, "protein_name": "Pre-mRNA-splicing factor syf2", "gene_name": "syf2", "organism": "Zebrafish", "refseq_name": "pre-mRNA-splicing factor syf2", "refseq_ac": "NP_001003437", "gene_names_uniprotkb": "syf2; zgc:92835", "gene_names_refseq": "hm:zeh0031; syf2; zeh0031; zgc:113871; zgc:92835", "protein_names_uniprotkb": "Pre-mRNA-splicing factor syf2", "protein_names_refseq": "SYF2 homolog, RNA splicing factor; pre-mRNA-splicing factor syf2", "tax_id": 7955, "disease": "encephalitis (Disease Ontology:DOID:9588)", "pathway": " (dre:445043); (R-DRE-72163)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076298.1, BC091556.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076298.1., [RefSeq]; Involved in pre-mRNA splicing as component of the spliceosome., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5BJA7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0071013 catalytic step 2 spliceosome;GO:0071014 post-mRNA release spliceosomal complex;GO:0071007 U2-type catalytic step 2 spliceosome;GO:0000974 Prp19 complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGP2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGP8-1", "uniprot_id": "NRN1_DANRE", "mass": 15618.0, "length": 142, "protein_name": "Neuritin", "gene_name": "nrn1", "organism": "Zebrafish", "refseq_name": "neuritin precursor", "refseq_ac": "NP_001002507", "gene_names_uniprotkb": "nrn1; zgc:92828", "gene_names_refseq": "nrn1a; nrn1; zgc:92828", "protein_names_uniprotkb": "Neuritin", "protein_names_refseq": "cpg15; neuritin 1; neuritin precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:436780)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076292.1, CK360545.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076292.1., [RefSeq]; Modulates postsynaptic dendritic arbor elaboration and synaptic maturation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse;GO:0098552 side of membrane", "go_biological_process": "GO:1990138 neuron projection extension", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGP8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGR4-1", "uniprot_id": "HGH1_DANRE", "mass": 43200.0, "length": 377, "protein_name": "Co-chaperone protein HGH1 homolog", "gene_name": "hgh1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "hgh1; brp16; fam203a; zgc:92803", "gene_names_refseq": "", "protein_names_uniprotkb": "Co-chaperone protein HGH1 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:436795)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Co-chaperone involved in the folding of nascent eukaryotic elongation factor eEF2, an essential component of the translation machinery. Recognizes a non-native conformation in the central domain of eEF2 and recruits the chaperonin-containing T-complex (TRiC) to the C-terminal region of the nascent polypeptide, preventing unproductive interactions and promoting efficient folding of the N-terminal GTPase domain. May also assist in eEF2 maturation by recruiting the molecular chaperone Hsp90., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8KBP9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGR4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGV7-1", "uniprot_id": "M17L2_DANRE", "mass": 23198.0, "length": 199, "protein_name": "Mpv17-like protein 2", "gene_name": "mpv17l2", "organism": "Zebrafish", "refseq_name": "mpv17-like protein 2", "refseq_ac": "NP_001002567", "gene_names_uniprotkb": "mpv17l2; zgc:92754", "gene_names_refseq": "mpv17l2; zgc:103505; zgc:92754", "protein_names_uniprotkb": "Mpv17-like protein 2", "protein_names_refseq": "MPV17 mitochondrial membrane protein-like 2; mpv17-like protein 2", "tax_id": 7955, "disease": "mitochondrial DNA depletion syndrome 3 (Disease Ontology:DOID:0080121); mitochondrial DNA depletion syndrome 6 (Disease Ontology:DOID:0080125); mitochondrial metabolism disease (Disease Ontology:DOID:700)", "pathway": " (dre:436840)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076231.1, BC086824.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076231.1., [RefSeq]; Required for the assembly and stability of the mitochondrial ribosome (By similarity). Is a positive regulator of mitochondrial protein synthesis (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5PR53", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGV7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGX3-1", "uniprot_id": "ANR54_DANRE", "mass": 34335.0, "length": 315, "protein_name": "Ankyrin repeat domain-containing protein 54", "gene_name": "ankrd54", "organism": "Zebrafish", "refseq_name": "ankyrin repeat domain-containing protein 54", "refseq_ac": "NP_001002578", "gene_names_uniprotkb": "ankrd54; zgc:110569; zgc:92735", "gene_names_refseq": "ankrd54; fi33d09; wu:fi33d09; zgc:110569; zgc:92735", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein 54", "protein_names_refseq": "ankyrin repeat domain-containing protein 54", "tax_id": 7955, "disease": "", "pathway": " (dre:436851)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076214.1, BC092933.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076214.1., [RefSeq]; Plays an important role in regulating intracellular signaling events associated with erythroid terminal differentiation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0030496 midbody", "go_biological_process": "GO:1902531 regulation of intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGX3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGY3-1", "uniprot_id": "TCTA_DANRE", "mass": 11417.0, "length": 100, "protein_name": "T-cell leukemia translocation-altered gene protein homolog", "gene_name": "tcta", "organism": "Zebrafish", "refseq_name": "T-cell leukemia translocation-altered gene protein homolog", "refseq_ac": "NP_001002585", "gene_names_uniprotkb": "tcta; zgc:92721", "gene_names_refseq": "tcta; wu:fb06g04; zgc:92721", "protein_names_uniprotkb": "T-cell leukemia translocation-altered gene protein homolog", "protein_names_refseq": "T-cell leukemia translocation-altered gene protein homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:436858)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076201.1, CT633277.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1, EH556465.1 and CT633277.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0072675 osteoclast fusion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGY3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGY7-1", "uniprot_id": "CRGNB_DANRE", "mass": 21745.0, "length": 183, "protein_name": "Gamma-crystallin N-B", "gene_name": "crygnb", "organism": "Zebrafish", "refseq_name": "gamma-crystallin N-B", "refseq_ac": "NP_001003428", "gene_names_uniprotkb": "crygnb; crygn2; zgc:92717", "gene_names_refseq": "crygn2; crygnb; zgc:92717", "protein_names_uniprotkb": "Gamma-crystallin N-B; Gamma-N-crystallin-B; Gamma-N2-crystallin", "protein_names_refseq": "gamma-D-crystallin; gamma-N-crystallin-B; gamma-N2-crystallin; gamma-crystallin N-B; gammaN2-crystallin", "tax_id": 7955, "disease": "", "pathway": " (dre:445034)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15853812", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: DT872604.1, CN503160.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1 and EH590493.1. On Aug 31, 2013 this sequence version replaced XP_005170702.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Crystallins are the dominant structural components of the vertebrate eye lens., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005212 structural constituent of eye lens", "go_cellular_component": "", "go_biological_process": "GO:0007601 visual perception;GO:0002088 lens development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DGY7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DGZ0-1", "uniprot_id": "GPT11_DANRE", "mass": 30347.0, "length": 262, "protein_name": "G patch domain-containing protein 11", "gene_name": "gpatch11", "organism": "Zebrafish", "refseq_name": "G patch domain-containing protein 11", "refseq_ac": "NP_001002393", "gene_names_uniprotkb": "gpatch11; ccdc75; zgc:92714", "gene_names_refseq": "ccdc75; gpatch11; zgc:92714", "protein_names_uniprotkb": "G patch domain-containing protein 11; Coiled-coil domain-containing protein 75", "protein_names_refseq": "G patch domain-containing protein 11; coiled-coil domain containing 75; coiled-coil domain-containing protein 75", "tax_id": 7955, "disease": "", "pathway": " (dre:436666)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076194.1, EH549140.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076194.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0000776 kinetochore", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DGZ0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH23-1", "uniprot_id": "V26BL_DANRE", "mass": 38377.0, "length": 329, "protein_name": "Vacuolar protein sorting-associated protein 26B-like", "gene_name": "vps26bl", "organism": "Zebrafish", "refseq_name": "vacuolar protein sorting-associated protein 26B-like", "refseq_ac": "NP_001002415", "gene_names_uniprotkb": "vps26bl; zgc:92676", "gene_names_refseq": "vps26bl; zgc:92676", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 26B-like; Vesicle protein sorting 26B-like", "protein_names_refseq": "vacuolar protein sorting-associated protein 26B-like; vesicle protein sorting 26B-like", "tax_id": 7955, "disease": "brain cancer (Disease Ontology:DOID:1319)", "pathway": " (dre:436688)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076160.1, EH537225.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076160.1., [RefSeq]; Probable component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0030906 retromer, cargo-selective complex;GO:0005768 endosome;GO:0005829 cytosol", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0042147 retrograde transport, endosome to Golgi", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DH23-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH26-1", "uniprot_id": "MED31_DANRE", "mass": 16521.0, "length": 136, "protein_name": "Mediator of RNA polymerase II transcription subunit 31", "gene_name": "med31", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 31", "refseq_ac": "NP_001002417", "gene_names_uniprotkb": "med31; soh1", "gene_names_refseq": "fa04d01; med31; wu:fa04d01; zgc:92673", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 31; Mediator complex subunit 31; Mediator complex subunit soh1", "protein_names_refseq": "mediator complex subunit soh1; mediator of RNA polymerase II transcription subunit 31; mediator of RNA polymerase II transcription, subunit 31 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:436690)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH497636.1, BC076157.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476733, SAMEA4476756 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH553004.1 and EH600668.1. On Sep 30, 2011 this sequence version replaced NP_001002417.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex;GO:0070847 core mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DH26-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH29-1", "uniprot_id": "Q6DH29_DANRE", "mass": 24334.0, "length": 207, "protein_name": "Small ribosomal subunit protein mS26", "gene_name": "mrps26", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein mS26", "refseq_ac": "NP_001002418", "gene_names_uniprotkb": "mrps26; zgc:92670", "gene_names_refseq": "mrps26; zgc:92670", "protein_names_uniprotkb": "Small ribosomal subunit protein mS26; 28S ribosomal protein S26, mitochondrial", "protein_names_refseq": "small ribosomal subunit protein mS26", "tax_id": 7955, "disease": "", "pathway": " (dre:436691); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076154.1, EH545809.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476728, SAMEA4476767 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076154.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8Q5P3;F6PAP0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005763 mitochondrial small ribosomal subunit", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DH29-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH44-1", "uniprot_id": "WDR83_DANRE", "mass": 34795.0, "length": 315, "protein_name": "WD repeat domain-containing protein 83", "gene_name": "wdr83", "organism": "Zebrafish", "refseq_name": "WD repeat domain-containing protein 83", "refseq_ac": "NP_001002429", "gene_names_uniprotkb": "wdr83; morg1; zgc:92654", "gene_names_refseq": "fj29g04; morg1; wdr83; wu:fj29g04; zgc:92654", "protein_names_uniprotkb": "WD repeat domain-containing protein 83; MAPK organizer 1; Mitogen-activated protein kinase organizer 1", "protein_names_refseq": "MAPK organizer 1; WD repeat domain-containing protein 83; mitogen-activated protein kinase organizer 1", "tax_id": 7955, "disease": "", "pathway": " (dre:436702); (R-DRE-5674135)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076138.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076138.1., [RefSeq]; Molecular scaffold protein for various multimeric protein complexes. Acts as a module in the assembly of a multicomponent scaffold for the ERK pathway, linking ERK responses to specific agonists. Also involved in response to hypoxia by acting as a negative regulator of HIF1A/HIF-1-alpha (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0071013 catalytic step 2 spliceosome", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DH44-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH55-1", "uniprot_id": "Q6DH55_DANRE", "mass": 37033.0, "length": 340, "protein_name": "Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3a", "gene_name": "gnb3a", "organism": "Zebrafish", "refseq_name": "guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3a", "refseq_ac": "NP_001002437", "gene_names_uniprotkb": "gnb3a; gnb3l; zgc:92641", "gene_names_refseq": "gnb3a; gnb3l; zgc:92641", "protein_names_uniprotkb": "Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3a", "protein_names_refseq": "guanine nucleotide binding protein (G protein), beta polypeptide 3, like; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3a", "tax_id": 7955, "disease": "congenital stationary night blindness 1H (Disease Ontology:DOID:0110866); hypertension (Disease Ontology:DOID:10763); essential hypertension (Disease Ontology:DOID:10825); familial hyperlipidemia (Disease Ontology:DOID:1168); depressive disorder (Disease Ontology:DOID:1596); carotid artery disease (Disease Ontology:DOID:3407); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:436710); (R-DRE-202040); (R-DRE-381676); (R-DRE-381771); (R-DRE-392170); (R-DRE-400042); (R-DRE-416476); (R-DRE-418594); (R-DRE-418597); (R-DRE-420092); (R-DRE-428930); (R-DRE-432040); (R-DRE-456926); (R-DRE-6814122); (R-DRE-9717207); (R-DRE-9856530)", "pathway_count": 16, "publication_count": 10, "publication_id_list": "19500364;19786091;22096073;22814267;24924194;30695021;30863400;34462505;36737489;37351277", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076127.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076127.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6PBP8;Q1MT88", "ec_number_list": "", "go_molecular_function": "GO:0030159 signaling receptor complex adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005834 heterotrimeric G-protein complex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q6DH55-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH69-1", "uniprot_id": "FAH2A_DANRE", "mass": 58093.0, "length": 532, "protein_name": "Fatty-acid amide hydrolase 2-A", "gene_name": "faah2a", "organism": "Zebrafish", "refseq_name": "fatty-acid amide hydrolase 2-A", "refseq_ac": "NP_001002700", "gene_names_uniprotkb": "faah2a; zgc:92625", "gene_names_refseq": "faah2a; zgc:92625", "protein_names_uniprotkb": "Fatty-acid amide hydrolase 2-A; 3.5.1.99", "protein_names_refseq": "fatty-acid amide hydrolase 2-A", "tax_id": 7955, "disease": "Parkinson's disease 1 (Disease Ontology:DOID:0060367)", "pathway": " (dre:436973); (R-DRE-2142753)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "17256142", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076113.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076113.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "3.5.1.99", "go_molecular_function": "GO:0017064 fatty acid amide hydrolase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DH69-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH74-1", "uniprot_id": "SNR27_DANRE", "mass": 19131.0, "length": 158, "protein_name": "U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein", "gene_name": "snrnp27", "organism": "Zebrafish", "refseq_name": "U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein", "refseq_ac": "NP_001002703", "gene_names_uniprotkb": "snrnp27; zgc:92615", "gene_names_refseq": "snrnp27; zgc:92615", "protein_names_uniprotkb": "U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein; U4/U6.U5 snRNP 27 kDa protein; U4/U6.U5 tri-snRNP-associated protein 3; U4/U6.U5-27K", "protein_names_refseq": "U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein; U4/U6.U5 snRNP 27 kDa protein; U4/U6.U5 tri-snRNP-associated protein 3; U4/U6.U5-27K", "tax_id": 7955, "disease": "", "pathway": " (dre:436976)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076105.1, EH500980.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476737, SAMEA4476739 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076105.1., [RefSeq]; May play a role in mRNA splicing., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DH74-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH87-1", "uniprot_id": "FUND1_DANRE", "mass": 16744.0, "length": 152, "protein_name": "FUN14 domain-containing protein 1", "gene_name": "fundc1", "organism": "Zebrafish", "refseq_name": "FUN14 domain-containing protein 1", "refseq_ac": "NP_001002711", "gene_names_uniprotkb": "fundc1; si:ch211-222m21.2; zgc:92600", "gene_names_refseq": "fundc1; zgc:92600", "protein_names_uniprotkb": "FUN14 domain-containing protein 1", "protein_names_refseq": "FUN14 domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:436984); (R-DRE-8934903)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "23594743;31827208", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH445440.1, BC076092.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH445440.1 and EH467793.1. On Feb 8, 2011 this sequence version replaced NP_001002711.1., [RefSeq]; Acts as an activator of hypoxia-induced mitophagy, an important mechanism for mitochondrial quality control., [UniProtKB]; Fundc1 is necessary for proper body axis formation during embryogenesis in zebrafish. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B8A5Q6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane", "go_biological_process": "GO:0001666 response to hypoxia;GO:0000422 autophagy of mitochondrion", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6DH87-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DH88-1", "uniprot_id": "COX20_DANRE", "mass": 12279.0, "length": 111, "protein_name": "Cytochrome c oxidase assembly protein COX20, mitochondrial", "gene_name": "cox20", "organism": "Zebrafish", "refseq_name": "cytochrome c oxidase assembly protein COX20, mitochondrial", "refseq_ac": "NP_001002712", "gene_names_uniprotkb": "cox20; fam36a; zgc:92598", "gene_names_refseq": "cox20; fam36a; zgc:92598", "protein_names_uniprotkb": "Cytochrome c oxidase assembly protein COX20, mitochondrial", "protein_names_refseq": "COX20 cytochrome c oxidase assembly factor; cytochrome c oxidase assembly protein COX20, mitochondrial; cytochrome c oxidase protein 20 homolog; protein FAM36A", "tax_id": 7955, "disease": "mitochondrial complex IV deficiency nuclear type 11 (Disease Ontology:DOID:0070497)", "pathway": " (dre:436985); (R-DRE-9864848)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH553945.1, EH573078.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505382 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH553945.1, JBMGRA010000013.1 and EH537365.1. On or before Nov 7, 2015 this sequence version replaced XP_005174473.1, NP_001002712.1., [RefSeq]; Essential for the assembly of the mitochondrial respiratory chain complex IV (CIV), also known as cytochrome c oxidase. Acts as a chaperone in the early steps of cytochrome c oxidase subunit II (MT-CO2/COX2) maturation, stabilizing the newly synthesized protein and presenting it to metallochaperones SCO1/2 which in turn facilitates the incorporation of the mature MT-CO2/COX2 into the assembling CIV holoenzyme., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0033617 mitochondrial respiratory chain complex IV assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DH88-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHB5-1", "uniprot_id": "LHPL3_DANRE", "mass": 23499.0, "length": 216, "protein_name": "LHFPL tetraspan subfamily member 3 protein", "gene_name": "lhfpl3", "organism": "Zebrafish", "refseq_name": "LHFPL tetraspan subfamily member 3 protein", "refseq_ac": "NP_001003444", "gene_names_uniprotkb": "lhfpl3; zgc:92534", "gene_names_refseq": "lhfpl3; zgc:92534", "protein_names_uniprotkb": "LHFPL tetraspan subfamily member 3 protein; Lipoma HMGIC fusion partner-like 3 protein", "protein_names_refseq": "LHFPL tetraspan subfamily member 3 protein; lipoma HMGIC fusion partner-like 3 protein", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 67 (Disease Ontology:DOID:0110518)", "pathway": " (dre:445050)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076060.1, CK138816.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076060.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007605 sensory perception of sound", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DHB5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHC3-1", "uniprot_id": "S2540_DANRE", "mass": 39100.0, "length": 353, "protein_name": "Mitochondrial glutathione transporter SLC25A40", "gene_name": "slc25a40", "organism": "Zebrafish", "refseq_name": "mitochondrial glutathione transporter SLC25A40", "refseq_ac": "NP_001002360", "gene_names_uniprotkb": "slc25a40; zgc:92520", "gene_names_refseq": "slc25a40; zgc:92520", "protein_names_uniprotkb": "Mitochondrial glutathione transporter SLC25A40; Solute carrier family 25 member 40", "protein_names_refseq": "mitochondrial glutathione transporter SLC25A40; probable mitochondrial glutathione transporter SLC25A40", "tax_id": 7955, "disease": "neurodegenerative disease (Disease Ontology:DOID:1289)", "pathway": " (dre:436633)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076052.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076052.1., [RefSeq]; Probable mitochondrial transporter required for glutathione import into mitochondria. Glutathione, which plays key roles in oxidative metabolism, is produced exclusively in the cytosol and is imported in many organelles (By similarity). Mitochondrial glutathione is required for the activity and stability of proteins containing iron-sulfur clusters (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0034634 glutathione transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:1990542 mitochondrial transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DHC3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHF7-1", "uniprot_id": "GTPBA_DANRE", "mass": 41757.0, "length": 380, "protein_name": "GTP-binding protein 10", "gene_name": "gtpbp10", "organism": "Zebrafish", "refseq_name": "GTP-binding protein 10", "refseq_ac": "NP_001002454", "gene_names_uniprotkb": "gtpbp10; zgc:92334", "gene_names_refseq": "gtpbp10; zgc:92334", "protein_names_uniprotkb": "GTP-binding protein 10", "protein_names_refseq": "GTP-binding protein 10", "tax_id": 7955, "disease": "", "pathway": " (dre:436727)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076017.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076017.1., [RefSeq]; May be involved in the ribosome maturation process., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005739 mitochondrion", "go_biological_process": "GO:0042254 ribosome biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DHF7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHJ1-1", "uniprot_id": "TYW3_DANRE", "mass": 28798.0, "length": 251, "protein_name": "tRNA wybutosine-synthesizing protein 3 homolog", "gene_name": "tyw3", "organism": "Zebrafish", "refseq_name": "tRNA wybutosine-synthesizing protein 3 homolog", "refseq_ac": "NP_001002611", "gene_names_uniprotkb": "tyw3; si:ch211-215b16.3; zgc:92277", "gene_names_refseq": "tyw3; zgc:92277", "protein_names_uniprotkb": "tRNA wybutosine-synthesizing protein 3 homolog; 2.1.1.282; tRNA(Phe) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-methyltransferase; tRNA-yW-synthesizing protein 3", "protein_names_refseq": "tRNA wybutosine-synthesizing protein 3 homolog; tRNA(Phe) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))- methyltransferase; tRNA-yW-synthesizing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:436884)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075981.1, EE324655.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075981.1., [RefSeq]; Probable S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA., [UniProtKB, UniProtKB]; S-adenosyl-L-methionine-dependent methyltransferase involved in the biosynthesis of wybutosine, a hyper modified guanosine with a tricyclic base located at position 37 of eukaryotic phenylalanine tRNA (tRNA(Phe)) that contributes to maintenance of the translational reading frame. Catalyzes the methylation of 4-demethylwyosine, generating intermediates required for the formation of mature wybutosine., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5PN41", "ec_number_list": "2.1.1.282", "go_molecular_function": "GO:0008175 tRNA methyltransferase activity;GO:0008168 methyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0030488 tRNA methylation;GO:0031591 wybutosine biosynthetic process;GO:0008033 tRNA processing;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DHJ1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHJ6-1", "uniprot_id": "COXM2_DANRE", "mass": 9480.0, "length": 78, "protein_name": "COX assembly mitochondrial protein 2 homolog", "gene_name": "cmc2", "organism": "Zebrafish", "refseq_name": "COX assembly mitochondrial protein 2 homolog", "refseq_ac": "NP_001002614", "gene_names_uniprotkb": "cmc2; 2310061C15Rik; DC13; si:busm1-241h12.4; si:dkey-220e7.3-001; si:dz241h12.4-001; si:dz241h12.4; zgc:92271", "gene_names_refseq": "2310061C15Rik; DC13; cmc2; si:busm1-241h12.4; si:dz241h12.4; zgc:92271", "protein_names_uniprotkb": "COX assembly mitochondrial protein 2 homolog", "protein_names_refseq": "COX assembly mitochondrial protein 2 homolog", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075976.1, GDQQ01009184.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505385, SAMEA4476730 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1 and BC075976.1. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein., [RefSeq]; May be involved in cytochrome c oxidase biogenesis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q801T8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DHJ6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHL7-1", "uniprot_id": "C85CB_DANRE", "mass": 45094.0, "length": 399, "protein_name": "Coiled-coil domain-containing protein 85C-B", "gene_name": "ccdc85cb", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 85C-B", "refseq_ac": "NP_001002628", "gene_names_uniprotkb": "ccdc85cb; im:7148435; zgc:92236", "gene_names_refseq": "ccdc85cb; im:7148435; zgc:92236", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 85C-B", "protein_names_refseq": "coiled-coil domain-containing protein 85C-B", "tax_id": 7955, "disease": "hydrocephalus (Disease Ontology:DOID:10908)", "pathway": " (dre:436901)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075952.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075952.1., [RefSeq]; May play a role in cell-cell adhesion and epithelium development through its interaction with proteins of the beta-catenin family (By similarity). May play an important role in cortical development, especially in the maintenance of radial glia (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005912 adherens junction;GO:0005923 bicellular tight junction;GO:0043296 apical junction complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DHL7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHL8-1", "uniprot_id": "Q6DHL8_DANRE", "mass": 22738.0, "length": 198, "protein_name": "Troponin I, skeletal, slow d", "gene_name": "tnni1d", "organism": "Zebrafish", "refseq_name": "troponin I, skeletal, slow d", "refseq_ac": "NP_001002629", "gene_names_uniprotkb": "tnni1d; zgc:92233", "gene_names_refseq": "tnni1d; zgc:92233", "protein_names_uniprotkb": "Troponin I, skeletal, slow d", "protein_names_refseq": "troponin I, skeletal, slow d", "tax_id": 7955, "disease": "cardiomyopathy (Disease Ontology:DOID:0050700); heart disease (Disease Ontology:DOID:114); dilated cardiomyopathy (Disease Ontology:DOID:12930); adenocarcinoma (Disease Ontology:DOID:299)", "pathway": " (dre:436902); (R-DRE-390522); (R-DRE-5578775)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "23557687;25583992;26979795;29729476;34016526", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075951.1, CN329931.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075951.1., [RefSeq]; Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IY64;F6NK74", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005861 troponin complex", "go_biological_process": "GO:0003009 skeletal muscle contraction;GO:0060048 cardiac muscle contraction", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6DHL8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHN0-1", "uniprot_id": "TMM53_DANRE", "mass": 32512.0, "length": 281, "protein_name": "Transmembrane protein 53", "gene_name": "tmem53", "organism": "Zebrafish", "refseq_name": "transmembrane protein 53", "refseq_ac": "NP_001002637", "gene_names_uniprotkb": "tmem53; zgc:92204", "gene_names_refseq": "tmem53; zgc:92204", "protein_names_uniprotkb": "Transmembrane protein 53", "protein_names_refseq": "transmembrane protein 53", "tax_id": 7955, "disease": "craniotubular dysplasia Ikegawa type (Disease Ontology:DOID:0112340)", "pathway": " (dre:436910)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075937.1, CK030264.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075937.1., [RefSeq]; Ensures normal bone formation, through the negative regulation of bone morphogenetic protein (BMP) signaling in osteoblast lineage cells by blocking cytoplasm-nucleus translocation of phosphorylated SMAD proteins., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0031965 nuclear membrane;GO:0005640 nuclear outer membrane", "go_biological_process": "GO:0046822 regulation of nucleocytoplasmic transport;GO:0030514 negative regulation of BMP signaling pathway;GO:0045668 negative regulation of osteoblast differentiation;GO:0030279 negative regulation of ossification", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DHN0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHN3-1", "uniprot_id": "TM2D2_DANRE", "mass": 25377.0, "length": 229, "protein_name": "TM2 domain-containing protein 2", "gene_name": "tm2d2", "organism": "Zebrafish", "refseq_name": "TM2 domain-containing protein 2 precursor", "refseq_ac": "NP_001002640", "gene_names_uniprotkb": "tm2d2; si:dkey-49o11.3; zgc:92201", "gene_names_refseq": "tm2d2; zgc:92201", "protein_names_uniprotkb": "TM2 domain-containing protein 2", "protein_names_refseq": "TM2 domain-containing protein 2 precursor; TM2 domain-containing protein 2", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652)", "pathway": " (dre:436913)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075934.1, EH540799.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075934.1., [RefSeq]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DHN3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHP0-1", "uniprot_id": "Q6DHP0_DANRE", "mass": 20517.0, "length": 179, "protein_name": "ADP-ribosylation factor-like protein 5A", "gene_name": "arl5a", "organism": "Zebrafish", "refseq_name": "ADP-ribosylation factor-like protein 5A", "refseq_ac": "NP_001002339", "gene_names_uniprotkb": "arl5a; zgc:92193", "gene_names_refseq": "arl5a; zgc:92193", "protein_names_uniprotkb": "ADP-ribosylation factor-like protein 5A", "protein_names_refseq": "ADP-ribosylation factor-like protein 5A", "tax_id": 7955, "disease": "", "pathway": " (dre:436611)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12477932", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0R114;F6P9I6", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport;GO:1903292 protein localization to Golgi membrane", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DHP0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DHU4-1", "uniprot_id": "PR38A_DANRE", "mass": 37550.0, "length": 313, "protein_name": "Pre-mRNA-splicing factor 38A", "gene_name": "prpf38a", "organism": "Zebrafish", "refseq_name": "pre-mRNA-splicing factor 38A", "refseq_ac": "NP_001003483", "gene_names_uniprotkb": "prpf38a; zgc:92059", "gene_names_refseq": "fa04h11; fc83e08; pmp22b; prpf38a; wu:fa04h11; wu:fc83e08; zgc:92059", "protein_names_uniprotkb": "Pre-mRNA-splicing factor 38A", "protein_names_refseq": "PRP38 pre-mRNA processing factor 38 domain containing A22b; PRP38 pre-mRNA processing factor 38 domain containing A; pre-mRNA-splicing factor 38A", "tax_id": 7955, "disease": "", "pathway": " (dre:445089)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01031522.1, BC075873.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1, BC075873.1, EH538851.1 and EH560061.1. On May 24, 2009 this sequence version replaced NP_001096602.1., [RefSeq]; Involved in pre-mRNA splicing as a component of the spliceosome., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A7MCG8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0071011 precatalytic spliceosome;GO:0071005 U2-type precatalytic spliceosome", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6DHU4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DI06-1", "uniprot_id": "TIM10_DANRE", "mass": 9956.0, "length": 88, "protein_name": "Mitochondrial import inner membrane translocase subunit Tim10", "gene_name": "timm10", "organism": "Zebrafish", "refseq_name": "mitochondrial import inner membrane translocase subunit Tim10", "refseq_ac": "NP_001002678", "gene_names_uniprotkb": "timm10; tim10; zgc:86900", "gene_names_refseq": "timm10; zgc:86900", "protein_names_uniprotkb": "Mitochondrial import inner membrane translocase subunit Tim10", "protein_names_refseq": "mitochondrial import inner membrane translocase subunit Tim10", "tax_id": 7955, "disease": "", "pathway": " (dre:436951); (R-DRE-1268020)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH544410.1, SRR32588730.1103914.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Mitochondrial intermembrane chaperone that participates in the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane. May also be required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0032977 membrane insertase activity", "go_cellular_component": "GO:0042719 mitochondrial intermembrane space chaperone complex;GO:0042721 TIM22 mitochondrial import inner membrane insertion complex", "go_biological_process": "GO:0015031 protein transport;GO:0045039 protein insertion into mitochondrial inner membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6DI06-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DRG1-1", "uniprot_id": "RBM42_DANRE", "mass": 43690.0, "length": 402, "protein_name": "RNA-binding protein 42", "gene_name": "rbm42", "organism": "Zebrafish", "refseq_name": "RNA-binding protein 42", "refseq_ac": "NP_001003850", "gene_names_uniprotkb": "rbm42", "gene_names_refseq": "MGC10433l; rbm42; zgc:109907", "protein_names_uniprotkb": "RNA-binding protein 42; RNA-binding motif protein 42", "protein_names_refseq": "RNA-binding protein 42", "tax_id": 7955, "disease": "", "pathway": " (dre:445360)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15256591", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY648798.1, BC095046.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY648798.1., [RefSeq]; May bind RNA., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q504F4", "ec_number_list": "", "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0002088 lens development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DRG1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DRJ4-1", "uniprot_id": "KRI1_DANRE", "mass": 91653.0, "length": 765, "protein_name": "Protein KRI1 homolog", "gene_name": "kri1", "organism": "Zebrafish", "refseq_name": "protein KRI1 homolog", "refseq_ac": "NP_001002041", "gene_names_uniprotkb": "kri1; kri1l", "gene_names_refseq": "flj12949l; kri1l; kri1", "protein_names_uniprotkb": "Protein KRI1 homolog", "protein_names_refseq": "KRI1 homolog like; protein KRI1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:402800)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15256591;26138676", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY648765.1, BC163908.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY648765.1., [RefSeq]; Kri1l is required for normal ribosome biogenesis, expansion of definitive hematopoietic stem/progenitor cells and subsequent lineage differentiation, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus;GO:0030686 90S preribosome", "go_biological_process": "GO:0042254 ribosome biogenesis;GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0060216 definitive hemopoiesis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6DRJ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6DRL8-1", "uniprot_id": "MD19B_DANRE", "mass": 27005.0, "length": 240, "protein_name": "Mediator of RNA polymerase II transcription subunit 19-B", "gene_name": "med19b", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 19-B", "refseq_ac": "NP_001003416", "gene_names_uniprotkb": "med19b; med19; zgc:110121", "gene_names_refseq": "lcmr1l; med19b; med19; zgc:110121", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 19-B; Mediator complex subunit 19-B", "protein_names_refseq": "mediator complex subunit 19-B; mediator of RNA polymerase II transcription subunit 19-B; mediator of RNA polymerase II transcription, subunit 19 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:445021)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15256591", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092743.1, AY648741.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092743.1. On or before Jul 6, 2005 this sequence version replaced XP_700538.1, NP_001003416.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q568S3", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6DRL8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6GMG6-1", "uniprot_id": "S5A3B_DANRE", "mass": 49108.0, "length": 452, "protein_name": "Solute carrier family 52, riboflavin transporter, member 3-B", "gene_name": "slc52a3b", "organism": "Zebrafish", "refseq_name": "solute carrier family 52, riboflavin transporter, member 3-B", "refseq_ac": "NP_001002182", "gene_names_uniprotkb": "slc52a3b; rft2b; zgc:91890", "gene_names_refseq": "RFT2-B; rft2b; slc52a3-2b; slc52a3b; zgc:91890", "protein_names_uniprotkb": "Solute carrier family 52, riboflavin transporter, member 3-B; RFT2-B; Riboflavin transporter 2-B", "protein_names_refseq": "riboflavin transporter 2-B; solute carrier family 52, riboflavin transporter, member 3-B", "tax_id": 7955, "disease": "Brown-Vialetto-Van Laere syndrome (Disease Ontology:DOID:0050694)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC074088.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC074088.1., [RefSeq]; Plasma membrane transporter mediating the uptake by cells of the water soluble vitamin B2/riboflavin that plays a key role in biochemical oxidation-reduction reactions of the carbohydrate, lipid, and amino acid metabolism., [UniProtKB, UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0032217 riboflavin transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0032218 riboflavin transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6GMG6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6GMK6-1", "uniprot_id": "TSN9_DANRE", "mass": 26783.0, "length": 239, "protein_name": "Tetraspanin-9", "gene_name": "tspan9b; tspan9", "organism": "Zebrafish", "refseq_name": "tetraspanin-9", "refseq_ac": "NP_001002186", "gene_names_uniprotkb": "tspan9b; tspan9; CH73-161G10.1; TSPAN9; Tspan-9; si:ch73-161g10.1; si:dkey-153k10.10; wu:fj18d05; zgc:91880", "gene_names_refseq": "CH73-161G10.1; TSPAN9; Tspan-9; tspan9b; wu:fj18d05; zgc:91880", "protein_names_uniprotkb": "Tetraspanin-9; Tspan-9", "protein_names_refseq": "tetraspanin-9", "tax_id": 7955, "disease": "", "pathway": " (dre:431733)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC074038.1, BC142792.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC074038.1. On Jan 3, 2007 this sequence version replaced XP_694517.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6GMK6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6GMK7-1", "uniprot_id": "SH3L2_DANRE", "mass": 12131.0, "length": 105, "protein_name": "SH3 domain-binding glutamic acid-rich-like protein 2", "gene_name": "sh3bgrl2", "organism": "Zebrafish", "refseq_name": "SH3 domain-binding glutamic acid-rich-like protein 2", "refseq_ac": "NP_001002197", "gene_names_uniprotkb": "sh3bgrl2; zgc:91852", "gene_names_refseq": "sh3bgrl2; zgc:91852", "protein_names_uniprotkb": "SH3 domain-binding glutamic acid-rich-like protein 2", "protein_names_refseq": "SH3 domain binding glutamic acid-rich protein like 2; SH3 domain-binding glutamic acid-rich-like protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:431744)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC074037.1, EH501053.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC074037.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0017124 SH3 domain binding;GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6GMK7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6GQN4-1", "uniprot_id": "FA32A_DANRE", "mass": 12935.0, "length": 109, "protein_name": "Protein FAM32A-like", "gene_name": "fam32al", "organism": "Zebrafish", "refseq_name": "protein FAM32A-like", "refseq_ac": "NP_001002203", "gene_names_uniprotkb": "fam32al; fam32a; zgc:91831", "gene_names_refseq": "fam32al; fam32a; zgc:91831", "protein_names_uniprotkb": "Protein FAM32A-like", "protein_names_refseq": "family with sequence similarity 32, member A, like; protein FAM32A-like", "tax_id": 7955, "disease": "", "pathway": " (dre:431750); (R-DRE-72163)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC072708.1, CK019336.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BC072708.1., [RefSeq]; May induce G2 arrest and apoptosis. May also increase cell sensitivity to apoptotic stimuli., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6GQN4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQ63-1", "uniprot_id": "MED6_DANRE", "mass": 29250.0, "length": 254, "protein_name": "Mediator of RNA polymerase II transcription subunit 6", "gene_name": "med6", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 6", "refseq_ac": "NP_001002084", "gene_names_uniprotkb": "med6; zgc:86933", "gene_names_refseq": "fa14c11; med6; wu:fa14c11; zgc:86933", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 6; Mediator complex subunit 6", "protein_names_refseq": "mediator of RNA polymerase II transcription subunit 6", "tax_id": 7955, "disease": "", "pathway": " (dre:415174)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071547.1, EH550054.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505382, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071547.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003713 transcription coactivator activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0016592 mediator complex;GO:0070847 core mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6IQ63-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQ86-1", "uniprot_id": "BRK1_DANRE", "mass": 8731.0, "length": 75, "protein_name": "Probable protein BRICK1", "gene_name": "brk1", "organism": "Zebrafish", "refseq_name": "probable protein BRICK1", "refseq_ac": "NP_001002097", "gene_names_uniprotkb": "brk1; zgc:86903", "gene_names_refseq": "brk1; zgc:86903", "protein_names_uniprotkb": "Probable protein BRICK1", "protein_names_refseq": "BRICK1, SCAR/WAVE actin-nucleating complex subunit; probable protein BRICK1", "tax_id": 7955, "disease": "", "pathway": " (dre:415187); (R-DRE-2029482); (R-DRE-5663213); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013423)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071524.1, CN503764.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1., [RefSeq]; Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0044877 protein-containing complex binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0031209 SCAR complex", "go_biological_process": "GO:0008064 regulation of actin polymerization or depolymerization;GO:0007015 actin filament organization;GO:0007507 heart development;GO:0048870 cell motility", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6IQ86-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQA2-1", "uniprot_id": "LYSM3_DANRE", "mass": 34063.0, "length": 305, "protein_name": "LysM and putative peptidoglycan-binding domain-containing protein 3", "gene_name": "lysmd3", "organism": "Zebrafish", "refseq_name": "lysM and putative peptidoglycan-binding domain-containing protein 3", "refseq_ac": "NP_001002104", "gene_names_uniprotkb": "lysmd3; zgc:86877", "gene_names_refseq": "cb462; lysmd3; sb:cb462; wu:fb75a04; zgc:86877", "protein_names_uniprotkb": "LysM and putative peptidoglycan-binding domain-containing protein 3", "protein_names_refseq": "lysM and putative peptidoglycan-binding domain-containing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:415194)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071508.1, CN022487.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505380, SAMEA3505382 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071508.1., [RefSeq]; Essential for Golgi structural integrity., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 1, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005886 plasma membrane", "go_biological_process": "GO:0007030 Golgi organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6IQA2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQE9-1", "uniprot_id": "ALKB6_DANRE", "mass": 26433.0, "length": 234, "protein_name": "Probable RNA/DNA demethylase ALKBH6", "gene_name": "alkbh6", "organism": "Zebrafish", "refseq_name": "probable RNA/DNA demethylase ALKBH6", "refseq_ac": "NP_001005390", "gene_names_uniprotkb": "alkbh6; si:ch211-222c22.5", "gene_names_refseq": "alkbh6; zgc:86795", "protein_names_uniprotkb": "Probable RNA/DNA demethylase ALKBH6; 1.14.11.-; Alkylated DNA repair protein alkB homolog 6; Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6", "protein_names_refseq": "alkB, alkylation repair homolog 6; alkylated DNA repair protein alkB homolog 6; alpha-ketoglutarate-dependent dioxygenase alkB homolog 6; probable RNA/DNA demethylase ALKBH6; probable alpha-ketoglutarate-dependent dioxygenase ABH6", "tax_id": 7955, "disease": "", "pathway": " (dre:317736)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071457.1, DT873030.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071457.1., [RefSeq]; Probable Fe(2+)/2-oxoglutarate-dependent dioxygenase involved in oxidative demethylation of nucleic acids. Binds nucleic acids with a preference for ssDNA or ssRNA to other types of DNAs. May play a role in nucleic acid damage repair., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0016706 2-oxoglutarate-dependent dioxygenase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6IQE9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQS9-1", "uniprot_id": "RM23_DANRE", "mass": 18257.0, "length": 153, "protein_name": "Large ribosomal subunit protein uL23m", "gene_name": "mrpl23", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein uL23m", "refseq_ac": "NP_001002052", "gene_names_uniprotkb": "mrpl23; zgc:86630", "gene_names_refseq": "mrpl23; zgc:86630", "protein_names_uniprotkb": "Large ribosomal subunit protein uL23m; 39S ribosomal protein L23, mitochondrial; L23mt; MRP-L23", "protein_names_refseq": "39S ribosomal protein L23, mitochondrial; L23mt; MRP-L23; large ribosomal subunit protein uL23m", "tax_id": 7955, "disease": "", "pathway": " (dre:415142); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071325.1, BC153659.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071325.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "GO:0032543 mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6IQS9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQT6-1", "uniprot_id": "Q6IQT6_DANRE", "mass": 12697.0, "length": 113, "protein_name": "BET1 homolog", "gene_name": "bet1", "organism": "Zebrafish", "refseq_name": "BET1 homolog", "refseq_ac": "NP_001002046", "gene_names_uniprotkb": "bet1; si:ch211-262k23.5; zgc:86622", "gene_names_refseq": "bet1; si:ch211-262k23.5; zgc:86622", "protein_names_uniprotkb": "BET1 homolog; Golgi vesicular membrane-trafficking protein p18", "protein_names_refseq": "BET1 homolog; blocked early in transport 1 homolog", "tax_id": 7955, "disease": "congenital muscular dystrophy with rapid progression (Disease Ontology:DOID:0061202)", "pathway": " (dre:415135); (R-DRE-204005); (R-DRE-6807878)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "24815885;26876635;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071318.1, EH443693.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071318.1. On Dec 21, 2007 this sequence version replaced XP_001330866.1., [RefSeq]; Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE involved in the docking process of ER-derived vesicles with the cis-Golgi membrane., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LXK7", "ec_number_list": "", "go_molecular_function": "GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane;GO:0031201 SNARE complex", "go_biological_process": "GO:0015031 protein transport;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0048280 vesicle fusion with Golgi apparatus", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6IQT6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQU4-1", "uniprot_id": "CWC15_DANRE", "mass": 27804.0, "length": 243, "protein_name": "Protein CWC15 homolog", "gene_name": "acsl4b; cwc15", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "acsl4b; cwc15; acsl4l; si:dkeyp-20g2.4; wu:fj68d08; wu:fl49b07; zgc:86607", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein CWC15 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "non-syndromic X-linked intellectual disability 63 (Disease Ontology:DOID:0112050); intellectual disability (Disease Ontology:DOID:1059)", "pathway": " (dre:334561); (dre:415140); (R-DRE-72163)", "pathway_count": 3, "publication_count": 11, "publication_id_list": "16109975;17762044;24330521;24332754;26469318;27189481;35563172;37714372;38788853;38944835;39528516", "class_list": "", "function": "Involved in pre-mRNA splicing as component of the spliceosome., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "6.2.1.3;6.2.1.15", "go_molecular_function": "GO:0003723 RNA binding;GO:0004467 long-chain fatty acid-CoA ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0071013 catalytic step 2 spliceosome;GO:0071007 U2-type catalytic step 2 spliceosome;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome;GO:0045292 mRNA cis splicing, via spliceosome;GO:0051216 cartilage development", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q6IQU4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6IQU7-1", "uniprot_id": "INT12_DANRE", "mass": 49591.0, "length": 479, "protein_name": "Integrator complex subunit 12", "gene_name": "ints12", "organism": "Zebrafish", "refseq_name": "integrator complex subunit 12", "refseq_ac": "NP_001002161", "gene_names_uniprotkb": "ints12; wu:fi17f05; zgc:86602", "gene_names_refseq": "ints12; wu:fi17f05; zgc:86602", "protein_names_uniprotkb": "Integrator complex subunit 12; Int12", "protein_names_refseq": "int12; integrator complex subunit 12", "tax_id": 7955, "disease": "", "pathway": " (dre:415251); (R-DRE-6807505)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC096989.1, CT700053.2 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC096989.1. On or before Jul 6, 2005 this sequence version replaced XP_701387.1, NP_001002161.1., [RefSeq]; Component of the integrator complex, a multiprotein complex that terminates RNA polymerase II (Pol II) transcription in the promoter-proximal region of genes. The integrator complex provides a quality checkpoint during transcription elongation by driving premature transcription termination of transcripts that are unfavorably configured for transcriptional elongation: the complex terminates transcription by (1) catalyzing dephosphorylation of the C-terminal domain (CTD) of Pol II subunit POLR2A/RPB1 and SUPT5H/SPT5, (2) degrading the exiting nascent RNA transcript via endonuclease activity and (3) promoting the release of Pol II from bound DNA. The integrator complex is also involved in terminating the synthesis of non-coding Pol II transcripts, such as enhancer RNAs (eRNAs), small nuclear RNAs (snRNAs), telomerase RNAs and long non-coding RNAs (lncRNAs)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4V9A0", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0032039 integrator complex;GO:0160232 INTAC complex", "go_biological_process": "GO:0034472 snRNA 3'-end processing;GO:0160240 RNA polymerase II transcription initiation surveillance;GO:0016180 snRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6IQU7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6JIY5-1", "uniprot_id": "HXCDA_DANRE", "mass": 34701.0, "length": 306, "protein_name": "Homeobox protein Hox-C13a", "gene_name": "hoxc13a", "organism": "Zebrafish", "refseq_name": "homeobox protein Hox-C13a", "refseq_ac": "NP_571618", "gene_names_uniprotkb": "hoxc13a", "gene_names_refseq": "hoxc13a", "protein_names_uniprotkb": "Homeobox protein Hox-C13a", "protein_names_refseq": "homeo box C13a; homeobox protein Hox-C13a", "tax_id": 7955, "disease": "ectodermal dysplasia 9 (Disease Ontology:DOID:0111656)", "pathway": " (dre:58059)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "15385162;16174031;9831563", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY452737.1, BC134023.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY452737.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Has an expression pattern in the developing tail bud that is consistent with the gene playing a role in axial patterning, [RefSeq, PubMed]; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4PR83;Q9YGS9", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0031101 fin regeneration", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6JIY5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NUV0-1", "uniprot_id": "RB3GP_DANRE", "mass": 108621.0, "length": 969, "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "rab3gap1", "organism": "Zebrafish", "refseq_name": "rab3 GTPase-activating protein catalytic subunit", "refseq_ac": "NP_001071256", "gene_names_uniprotkb": "rab3gap1; fj56a04; rab3gap; wu:fj56a04; zgc:152826", "gene_names_refseq": "fj56a04; rab3gap1; rab3gap; wu:fj56a04; zgc:152826", "protein_names_uniprotkb": "Rab3 GTPase-activating protein catalytic subunit", "protein_names_refseq": "rab3 GTPase-activating protein catalytic subunit", "tax_id": 7955, "disease": "Warburg micro syndrome (Disease Ontology:DOID:0060237); Warburg micro syndrome 1 (Disease Ontology:DOID:0110716)", "pathway": " (dre:777744)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01765705, SAMN02418766 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124142.1 and BC068420.1. On or before Aug 8, 2009 this sequence version replaced XP_001918630.1, NP_001071256.1., [RefSeq]; Catalytic subunit of the Rab3 GTPase-activating (Rab3GAP) complex composed of RAB3GAP1 and RAB3GAP2, which accelerates the otherwise slow GTP hydrolysis catalyzed by Rab proteins. Has GTPase-activating protein (GAP) activity towards various Rab3 subfamily members (RAB3A, RAB3B, RAB3C and RAB3D), RAB5A and RAB43. Additionally, it has guanine nucleotide exchange factor (GEF) activity towards RAB18, promoting GDP release from RAB18 and the conversion of inactive RAB18-GDP to the active form RAB18-GTP. Recruits and stabilizes RAB18 at the cis-Golgi membrane in fibroblasts where RAB18 is most likely activated. Also involved in RAB18 recruitment at the endoplasmic reticulum (ER) membrane where it maintains proper ER structure. Required for normal eye and brain development. May participate in neurodevelopmental processes such as cell proliferation, migration and differentiation before synapse formation, and is involved in regulating non-synaptic vesicular release of neurotransmitters., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005801 cis-Golgi network", "go_biological_process": "GO:0007420 brain development;GO:2000786 positive regulation of autophagosome assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NUV0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NUW9-1", "uniprot_id": "FGGY_DANRE", "mass": 58926.0, "length": 545, "protein_name": "FGGY carbohydrate kinase domain-containing protein", "gene_name": "fggy", "organism": "Zebrafish", "refseq_name": "FGGY carbohydrate kinase domain-containing protein", "refseq_ac": "NP_998446", "gene_names_uniprotkb": "fggy; zgc:85818", "gene_names_refseq": "fggy; zgc:85818", "protein_names_uniprotkb": "FGGY carbohydrate kinase domain-containing protein; 2.7.1.-", "protein_names_refseq": "FGGY carbohydrate kinase domain-containing protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC068399.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC068399.1. On Oct 4, 2011 this sequence version replaced NP_998446.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0019150 D-ribulokinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0019321 pentose metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NUW9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NUZ2-1", "uniprot_id": "TTY2L_DANRE", "mass": 59535.0, "length": 531, "protein_name": "Protein tweety homolog 2-like", "gene_name": "ttyh2l", "organism": "Zebrafish", "refseq_name": "protein tweety homolog 2-like", "refseq_ac": "NP_998421", "gene_names_uniprotkb": "ttyh2l; zgc:85736", "gene_names_refseq": "ttyh2l; ttyh2; wu:fi03f07; zgc:85736", "protein_names_uniprotkb": "Protein tweety homolog 2-like", "protein_names_refseq": "protein tweety homolog 2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:406540); (R-DRE-2672351)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC068374.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC068374.1. Sequence Note: This sequence has been modified as follows: removed 37 bp suspected to be vector contamination from the 3' end., [RefSeq]; Probable large-conductance Ca(2+)-activated chloride channel., [UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0072320 volume-sensitive chloride channel activity;GO:0005229 intracellularly calcium-gated chloride channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034707 chloride channel complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NUZ2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NV26-1", "uniprot_id": "SDA1_DANRE", "mass": 79022.0, "length": 682, "protein_name": "Protein SDA1 homolog", "gene_name": "sdad1", "organism": "Zebrafish", "refseq_name": "protein SDA1 homolog", "refseq_ac": "NP_775337", "gene_names_uniprotkb": "sdad1", "gene_names_refseq": "chunp6864; fa94e12; flj10498; sdad1; wu:fa94e12", "protein_names_uniprotkb": "Protein SDA1 homolog; SDA1 domain-containing protein 1", "protein_names_refseq": "SDA1 domain-containing protein 1; protein SDA1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:286746)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12006978", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AF506206.1, BC068340.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF506206.1., [RefSeq]; Required for 60S pre-ribosomal subunits export to the cytoplasm., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8JHJ0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0000055 ribosomal large subunit export from nucleus;GO:0015031 protein transport;GO:0042273 ribosomal large subunit biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NV26-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NV32-1", "uniprot_id": "PTMAA_DANRE", "mass": 11493.0, "length": 105, "protein_name": "Prothymosin alpha-A", "gene_name": "ptmaa", "organism": "Zebrafish", "refseq_name": "prothymosin alpha-A", "refseq_ac": "NP_919357", "gene_names_uniprotkb": "ptmaa; cb515; fk58d04; ptma; sb:cb515; wu:fb77b12; wu:fk58d04; zgc:158634; zgc:85633", "gene_names_refseq": "cb515; fk58d04; ptmaa; ptma; sb:cb515; wu:fb77b12; wu:fk58d04; zgc:158634; zgc:85633", "protein_names_uniprotkb": "Prothymosin alpha-A", "protein_names_refseq": "prothymosin alpha-A", "tax_id": 7955, "disease": "polycystic kidney disease (Disease Ontology:DOID:0080322); pulmonary emphysema (Disease Ontology:DOID:9675)", "pathway": " (dre:335707)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "18351673;20012190;26450176", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC068334.1, CK028096.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708828, SAMEA708836 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC068334.1. On or before Mar 22, 2008 this sequence version replaced XP_694234.2, NP_919357.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Data show that prothymosin alpha (PTMA) transcripts are expressed in the testis, and localize in meiotic and post-meiotic germ cells, namely spermatocytes and spermatids., [RefSeq, PubMed]; Data show that prothymosin alpha, a single copy gene found in all organisms investigated so far, is duplicated in zebrafish, and suggest that their function in cell proliferation and differentiation is more complex in fishes than in mammals., [RefSeq, PubMed]; Overexpression of Ptmaa in zebrafish epidermal cells promotes proliferation and attenuates UVB-induced apoptosis but does not cause skin cancer., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8QGP0", "ec_number_list": "", "go_molecular_function": "GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6NV32-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NV38-1", "uniprot_id": "T41AB_DANRE", "mass": 31759.0, "length": 278, "protein_name": "Transmembrane protein 41A-B", "gene_name": "tmem41ab", "organism": "Zebrafish", "refseq_name": "transmembrane protein 41A-B precursor", "refseq_ac": "NP_998248", "gene_names_uniprotkb": "tmem41ab; si:dkey-22o12.1; si:dkey-24b15.3; tmem41a; zgc:85616", "gene_names_refseq": "tmem41ab; tmem41a; zgc:85616", "protein_names_uniprotkb": "Transmembrane protein 41A-B", "protein_names_refseq": "transmembrane protein 41A-B precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:406356)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC068328.1, EE713106.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC068328.1. On Feb 12, 2008 this sequence version replaced NP_001073314.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LY83", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NV38-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NWA8-1", "uniprot_id": "TADA1_DANRE", "mass": 36961.0, "length": 332, "protein_name": "Transcriptional adapter 1", "gene_name": "tada1", "organism": "Zebrafish", "refseq_name": "transcriptional adapter 1", "refseq_ac": "NP_991169", "gene_names_uniprotkb": "tada1; tada1l; zgc:85851", "gene_names_refseq": "STAF42; tada1l; tada1; zgc:85851", "protein_names_uniprotkb": "Transcriptional adapter 1; Transcriptional adapter 1-like protein", "protein_names_refseq": "SPT3-associated factor 42; transcriptional adapter 1-like protein; transcriptional adapter 1", "tax_id": 7955, "disease": "", "pathway": " (dre:402899)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC153454.1, GDQH01012674.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1., [RefSeq]; Probably involved in transcriptional regulation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003713 transcription coactivator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000124 SAGA complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NWA8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NWB3-1", "uniprot_id": "Q6NWB3_DANRE", "mass": 41958.0, "length": 400, "protein_name": "Splicing factor 3B subunit 4", "gene_name": "sf3b4", "organism": "Zebrafish", "refseq_name": "splicing factor 3B subunit 4", "refseq_ac": "NP_705947", "gene_names_uniprotkb": "sf3b4; chunp6902; fb36a04; wu:fb36a04", "gene_names_refseq": "chunp6902; fb36a04; sf3b4; wu:fb36a04", "protein_names_uniprotkb": "Splicing factor 3B subunit 4", "protein_names_refseq": "splicing factor 3B subunit 4; splicing factor 3b, subunit 4, 49kD", "tax_id": 7955, "disease": "pancreatic cancer (Disease Ontology:DOID:1793); cervical cancer (Disease Ontology:DOID:4362); Nager acrofacial dysostosis (Disease Ontology:DOID:5768); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:192318); (R-DRE-72165); (R-DRE-9770562); (R-DRE-9943411)", "pathway_count": 4, "publication_count": 8, "publication_id_list": "26469318;27189481;32703943;34111665;34413171;37263342;38311285;38508476", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC067655.1, BC056532.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH501773.1 and CT611775.2. On Sep 26, 2004 this sequence version replaced NP_705947.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Component of the 17S U2 SnRNP complex of the spliceosome, a large ribonucleoprotein complex that removes introns from transcribed pre-mRNAs. The 17S U2 SnRNP complex (1) directly participates in early spliceosome assembly and (2) mediates recognition of the intron branch site during pre-mRNA splicing by promoting the selection of the pre-mRNA branch-site adenosine, the nucleophile for the first step of splicing. Within the 17S U2 SnRNP complex, SF3B4 is part of the SF3B subcomplex, which is required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence in pre-mRNA. Sequence independent binding of SF3A and SF3B subcomplexes upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Also acts as a component of the minor spliceosome, which is involved in the splicing of U12-type introns in pre-mRNAs., [UniProtKB, UniProtKB]; Transcriptome alterations in sf3b4-depleted zebrafish: Insights into cataract formation in retinitis pigmentosa model., [RefSeq, PubMed]; Transcriptomic analysis reveals mitochondrial dysfunction in the pathogenesis of Nager syndrome in sf3b4-depleted zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q1LVA6", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005686 U2 snRNP;GO:0071011 precatalytic spliceosome", "go_biological_process": "GO:1902866 regulation of retina development in camera-type eye;GO:0000398 mRNA splicing, via spliceosome;GO:0007632 visual behavior", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q6NWB3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NWC9-1", "uniprot_id": "GKAP1_DANRE", "mass": 41960.0, "length": 368, "protein_name": "G kinase-anchoring protein 1", "gene_name": "gkap1", "organism": "Zebrafish", "refseq_name": "G kinase-anchoring protein 1", "refseq_ac": "NP_998237", "gene_names_uniprotkb": "gkap1; wu:fi16a08; zgc:110393; zgc:66236; zgc:85804", "gene_names_refseq": "gkap1; wu:fi16a08; zgc:110393; zgc:66236; zgc:85804", "protein_names_uniprotkb": "G kinase-anchoring protein 1", "protein_names_refseq": "G kinase-anchoring protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:406581)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095240.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CV484924.1, EH444336.1, BC067639.1 and EH503286.1. On or before Jan 20, 2010 this sequence version replaced NP_001161990.1, XP_702622.1., [RefSeq]; May play a role in the regulation of insulin-dependent IRS1 tyrosine phosphorylation in adipocytes., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q503P0;Q7SYM2", "ec_number_list": "", "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "GO:0005794 Golgi apparatus", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NWC9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NWE0-1", "uniprot_id": "CK054_DANRE", "mass": 35238.0, "length": 319, "protein_name": "Ester hydrolase C11orf54 homolog", "gene_name": "zgc:85789", "organism": "Zebrafish", "refseq_name": "ester hydrolase C11orf54 homolog", "refseq_ac": "NP_997781", "gene_names_uniprotkb": "zgc:85789", "gene_names_refseq": "bkgd; fb58g01; wu:fb58g01; wu:fc54a08; zgc:85789", "protein_names_uniprotkb": "Ester hydrolase C11orf54 homolog; 3.1.-.-", "protein_names_refseq": "ester hydrolase C11orf54 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:322350)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC067627.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505382 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC067627.1., [RefSeq]; Exhibits ester hydrolase activity on the substrate p-nitrophenyl acetate, in vitro. May regulate DNA damage and repair by regulating HIF1A degradation via chaperone-mediated autophagy (CMA)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PHI5", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016788 hydrolase activity, acting on ester bonds", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006974 DNA damage response;GO:0006282 regulation of DNA repair", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NWE0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NWH1-1", "uniprot_id": "DCA10_DANRE", "mass": 56675.0, "length": 508, "protein_name": "DDB1- and CUL4-associated factor 10", "gene_name": "dcaf10; wdr32", "organism": "Zebrafish", "refseq_name": "DDB1- and CUL4-associated factor 10", "refseq_ac": "NP_998111", "gene_names_uniprotkb": "dcaf10; wdr32; dcaf10; wdr32; zgc:85718", "gene_names_refseq": "dcaf10; wdr32; zgc:85718", "protein_names_uniprotkb": "DDB1- and CUL4-associated factor 10; WD repeat-containing protein 32", "protein_names_refseq": "DDB1- and CUL4-associated factor 10; WD repeat-containing protein 32", "tax_id": 7955, "disease": "", "pathway": " (dre:405882); (R-DRE-8951664)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC067591.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC067591.1. On Aug 13, 2006 this sequence version replaced NP_998111.1., [RefSeq]; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NWH1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NWH5-1", "uniprot_id": "TMM11_DANRE", "mass": 20967.0, "length": 187, "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "tmem11", "organism": "Zebrafish", "refseq_name": "transmembrane protein 11, mitochondrial", "refseq_ac": "NP_001017400", "gene_names_uniprotkb": "tmem11; zgc:110086", "gene_names_refseq": "tmem11; zgc:110086", "protein_names_uniprotkb": "Transmembrane protein 11, mitochondrial", "protein_names_refseq": "transmembrane protein 11, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:407695)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092726.1, EH537924.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092726.1., [RefSeq]; Plays a role in mitochondrial morphogenesis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q561Y8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005741 mitochondrial outer membrane;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0007005 mitochondrion organization;GO:0007007 inner mitochondrial membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NWH5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NWI1-1", "uniprot_id": "RSRC2_DANRE", "mass": 46602.0, "length": 407, "protein_name": "Arginine/serine-rich coiled-coil protein 2", "gene_name": "rsrc2", "organism": "Zebrafish", "refseq_name": "arginine/serine-rich coiled-coil protein 2", "refseq_ac": "NP_998445", "gene_names_uniprotkb": "rsrc2; ik:tdsubc_1d5; si:ch211-110p13.2; tdsubc_1d5; wu:fc56g08; xx:tdsubc_1d5; zgc:85695", "gene_names_refseq": "ik:tdsubc_1d5; rsrc2; si:ch211-110p13.2; tdsubc_1d5; wu:fc56g08; xx:tdsubc_1d5; zgc:85695", "protein_names_uniprotkb": "Arginine/serine-rich coiled-coil protein 2", "protein_names_refseq": "arginine/serine-rich coiled-coil protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:406566)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC067581.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC067581.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NWI1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NXB2-1", "uniprot_id": "PDZ11_DANRE", "mass": 16424.0, "length": 142, "protein_name": "PDZ domain-containing protein 11", "gene_name": "pdzd11", "organism": "Zebrafish", "refseq_name": "PDZ domain-containing protein 11", "refseq_ac": "NP_998122", "gene_names_uniprotkb": "pdzd11; pdzk11; zgc:77536", "gene_names_refseq": "pdzd11; zgc:77536", "protein_names_uniprotkb": "PDZ domain-containing protein 11", "protein_names_refseq": "PDZ domain-containing protein 11", "tax_id": 7955, "disease": "", "pathway": " (dre:405893); (R-DRE-196780); (R-DRE-199220); (R-DRE-425397); (R-DRE-6803544); (R-DRE-936837)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154539.1, GFIL01029908.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005911 cell-cell junction;GO:0016323 basolateral plasma membrane;GO:0046930 pore complex;GO:0098793 presynapse", "go_biological_process": "GO:0046931 pore complex assembly;GO:0007269 neurotransmitter secretion;GO:0048489 synaptic vesicle transport;GO:0008582 regulation of synaptic assembly at neuromuscular junction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NXB2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NY34-1", "uniprot_id": "AS1BB_DANRE", "mass": 22054.0, "length": 197, "protein_name": "Histone chaperone asf1b-B", "gene_name": "asf1bb", "organism": "Zebrafish", "refseq_name": "histone chaperone asf1b-B", "refseq_ac": "NP_999922", "gene_names_uniprotkb": "asf1bb; asb1bb; si:ch73-343l4.9; zgc:76977", "gene_names_refseq": "asb1bb; asf1a; asf1bb; wu:fb20g03; zgc:76977", "protein_names_uniprotkb": "Histone chaperone asf1b-B; Anti-silencing function protein 1 homolog Bb", "protein_names_refseq": "ASF1 anti-silencing function 1 homolog Bb; anti-silencing function protein 1 homolog Bb; anti-silencing function protein 1-A; histone chaperone asf1-A; histone chaperone asf1b-B", "tax_id": 7955, "disease": "breast cancer (Disease Ontology:DOID:1612)", "pathway": " (dre:792029)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066755.1, GDQH01021107.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505390 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 7, 2009 this sequence version replaced XP_001331768.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B8JM31", "ec_number_list": "", "go_molecular_function": "GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006335 DNA replication-dependent chromatin assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NY34-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NY73-1", "uniprot_id": "L3BPB_DANRE", "mass": 64901.0, "length": 572, "protein_name": "Galectin-3-binding protein B", "gene_name": "lgals3bpb", "organism": "Zebrafish", "refseq_name": "galectin-3-binding protein B precursor", "refseq_ac": "NP_998038", "gene_names_uniprotkb": "lgals3bpb; zgc:77059", "gene_names_refseq": "lgals3bp.1; lgals3bpb; zgc:77059", "protein_names_uniprotkb": "Galectin-3-binding protein B; Lectin galactoside-binding soluble 3-binding protein B", "protein_names_refseq": "galectin-3-binding protein B precursor; galectin-3-binding protein B; lectin galactoside-binding soluble 3-binding protein B; lectin, galactoside-binding, soluble, 3 binding protein b", "tax_id": 7955, "disease": "", "pathway": " (dre:405809); (R-DRE-114608)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066712.1, EH580957.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476732, SAMEA4476773 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066712.1., [RefSeq]; Promotes integrin-mediated cell adhesion., [UniProtKB]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NY73-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYD7-1", "uniprot_id": "OCAD1_DANRE", "mass": 29733.0, "length": 266, "protein_name": "OCIA domain-containing protein 1", "gene_name": "ociad1", "organism": "Zebrafish", "refseq_name": "OCIA domain-containing protein 1", "refseq_ac": "NP_956596", "gene_names_uniprotkb": "ociad1; si:ch211-14g4.3; zgc:56639; zgc:76992", "gene_names_refseq": "ociad1; zgc:56639; zgc:76992", "protein_names_uniprotkb": "OCIA domain-containing protein 1", "protein_names_refseq": "OCIA domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049514.1, BC066633.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049514.1., [RefSeq]; Maintains stem cell potency. Increases STAT3 phosphorylation and controls ERK phosphorylation. May act as a scaffold, increasing STAT3 recruitment onto endosomes., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q7ZW99", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005768 endosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6NYD7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYE7-1", "uniprot_id": "TM192_DANRE", "mass": 30209.0, "length": 271, "protein_name": "Transmembrane protein 192", "gene_name": "tmem192", "organism": "Zebrafish", "refseq_name": "transmembrane protein 192", "refseq_ac": "NP_001095863", "gene_names_uniprotkb": "tmem192; zgc:77068", "gene_names_refseq": "tmem192; zgc:77068", "protein_names_uniprotkb": "Transmembrane protein 192", "protein_names_refseq": "transmembrane protein 192", "tax_id": 7955, "disease": "", "pathway": " (dre:797335)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC150390.1, BC066623.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC150390.1. On or before Apr 18, 2008 this sequence version replaced NP_998053.1, XP_001334925.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A7E2K3", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0005770 late endosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NYE7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYF0-1", "uniprot_id": "LACB2_DANRE", "mass": 32404.0, "length": 289, "protein_name": "Endoribonuclease LACTB2", "gene_name": "lactb2", "organism": "Zebrafish", "refseq_name": "endoribonuclease LACTB2", "refseq_ac": "NP_998049", "gene_names_uniprotkb": "lactb2; zgc:77065", "gene_names_refseq": "lactb2; zgc:77065", "protein_names_uniprotkb": "Endoribonuclease LACTB2; 3.1.27.-; Beta-lactamase-like protein 2", "protein_names_refseq": "beta-lactamase-like protein 2; endoribonuclease LACTB2", "tax_id": 7955, "disease": "", "pathway": " (dre:405820)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066620.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505377, SAMEA3505384 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066620.1., [RefSeq]; Endoribonuclease; cleaves preferentially 3' to purine-pyrimidine dinucleotide motifs in single-stranded RNA. The cleavage product contains a free 3' -OH group. Has no activity with double-stranded RNA or DNA. Required for normal mitochondrial function and cell viability., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016787 hydrolase activity;GO:0003727 single-stranded RNA binding;GO:0004521 RNA endonuclease activity", "go_cellular_component": "GO:0005759 mitochondrial matrix", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NYF0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYF1-1", "uniprot_id": "YIPF4_DANRE", "mass": 26630.0, "length": 237, "protein_name": "Protein YIPF4", "gene_name": "yipf4", "organism": "Zebrafish", "refseq_name": "protein YIPF4", "refseq_ac": "NP_998056", "gene_names_uniprotkb": "yipf4; zgc:77069", "gene_names_refseq": "yipf4; zgc:77069", "protein_names_uniprotkb": "Protein YIPF4; YIP1 family member 4", "protein_names_refseq": "YIP1 family member 4; protein YIPF4", "tax_id": 7955, "disease": "", "pathway": " (dre:405827)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066619.1, CK028284.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066619.1., [RefSeq]; Involved in the maintenance of the Golgi structure., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0048280 vesicle fusion with Golgi apparatus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NYF1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYG4-1", "uniprot_id": "CYYR1_DANRE", "mass": 17156.0, "length": 158, "protein_name": "Cysteine and tyrosine-rich protein 1", "gene_name": "cyyr1", "organism": "Zebrafish", "refseq_name": "cysteine and tyrosine-rich protein 1 precursor", "refseq_ac": "NP_998047", "gene_names_uniprotkb": "cyyr1; zgc:77252", "gene_names_refseq": "cyyr1; zgc:77252", "protein_names_uniprotkb": "Cysteine and tyrosine-rich protein 1", "protein_names_refseq": "cysteine and tyrosine-rich protein 1 precursor; cysteine and tyrosine-rich protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:405818)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588714.33312391.1, SRR32588721.5088337.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476772, SAMEA4476774 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1 and CT700616.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NYG4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYG6-1", "uniprot_id": "TDRD3_DANRE", "mass": 81779.0, "length": 733, "protein_name": "Tudor domain-containing protein 3", "gene_name": "tdrd3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "tdrd3; zgc:77174", "gene_names_refseq": "", "protein_names_uniprotkb": "Tudor domain-containing protein 3", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:402828)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "24240475;26469318;27189481;31059868", "class_list": "", "function": "Scaffolding protein that specifically recognizes and binds dimethylarginine-containing proteins. Plays a role in the regulation of translation of target mRNAs by binding Arg/Gly-rich motifs (GAR) in dimethylarginine-containing proteins. In nucleus, acts as a coactivator: recognizes and binds asymmetric dimethylation on the core histone tails associated with transcriptional activation (H3R17me2a and H4R3me2a) and recruits proteins at these arginine-methylated loci. In cytoplasm, acts as an antiviral factor that participates in the assembly of stress granules together with G3BP1., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding;GO:0003713 transcription coactivator activity;GO:0003723 RNA binding;GO:0140008 histone H4 reader activity;GO:0140006 histone H3 reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0140225 DNA topoisomerase III-beta-TDRD3 complex", "go_biological_process": "GO:0141194 siRNA-mediated heterochromatin formation;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6NYG6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYP0-1", "uniprot_id": "TM208_DANRE", "mass": 20034.0, "length": 175, "protein_name": "Transmembrane protein 208", "gene_name": "tmem208", "organism": "Zebrafish", "refseq_name": "transmembrane protein 208", "refseq_ac": "NP_996983", "gene_names_uniprotkb": "tmem208; zgc:77041", "gene_names_refseq": "si:dkey-286h2.6; tmem208; zgc:77041", "protein_names_uniprotkb": "Transmembrane protein 208", "protein_names_refseq": "transmembrane protein 208", "tax_id": 7955, "disease": "syndromic intellectual disability (Disease Ontology:DOID:0050888)", "pathway": " (dre:404632)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01000940.1, BC066516.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1., [RefSeq]; May function as a negative regulator of endoplasmic reticulum-stress induced autophagy., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0005773 vacuole", "go_biological_process": "GO:0006914 autophagy;GO:0006624 vacuolar protein processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NYP0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYS8-1", "uniprot_id": "OST48_DANRE", "mass": 48534.0, "length": 441, "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit", "gene_name": "ddost", "organism": "Zebrafish", "refseq_name": "dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit precursor", "refseq_ac": "NP_998258", "gene_names_uniprotkb": "ddost; zgc:66068", "gene_names_refseq": "ddost; wu:fa11d01; zgc:66068; zgc:77478", "protein_names_uniprotkb": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; DDOST 48 kDa subunit; Oligosaccharyl transferase 48 kDa subunit", "protein_names_refseq": "DDOST 48 kDa subunit; dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit precursor; dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; dolichyl-diphosphooligosaccharide-protein glycosyltransferase; oligosaccharyl transferase 48 kDa subunit", "tax_id": 7955, "disease": "congenital disorder of glycosylation Ir (Disease Ontology:DOID:0080569)", "pathway": " (dre:406408); (R-DRE-6798695); (R-DRE-9768727)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066475.1, BC056559.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505382, SAMEA3505384 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066475.1. On Aug 27, 2004 this sequence version replaced NP_998299.1., [RefSeq]; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation (By similarity). N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity (By similarity). Required for the assembly of both SST3A- and SS3B-containing OST complexes (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PHG6", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0008250 oligosaccharyltransferase complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6NYS8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYU7-1", "uniprot_id": "UPP_DANRE", "mass": 28806.0, "length": 257, "protein_name": "Uracil phosphoribosyltransferase homolog", "gene_name": "uprt", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "uprt; zgc:77421", "gene_names_refseq": "", "protein_names_uniprotkb": "Uracil phosphoribosyltransferase homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:404623)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NYU7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYX8-1", "uniprot_id": "PITH1_DANRE", "mass": 24058.0, "length": 210, "protein_name": "PITH domain-containing protein 1", "gene_name": "pithd1", "organism": "Zebrafish", "refseq_name": "PITH domain-containing protein 1", "refseq_ac": "NP_996957", "gene_names_uniprotkb": "pithd1; zgc:77241", "gene_names_refseq": "pithd1; zgc:77241", "protein_names_uniprotkb": "PITH domain-containing protein 1", "protein_names_refseq": "PITH domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:404606)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066423.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066423.1., [RefSeq]; May play a role in promoting megakaryocyte differentiation by up-regulating RUNX1 expression., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0045654 positive regulation of megakaryocyte differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NYX8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NYY4-1", "uniprot_id": "AS1BA_DANRE", "mass": 21943.0, "length": 197, "protein_name": "Histone chaperone asf1b-A", "gene_name": "asf1ba", "organism": "Zebrafish", "refseq_name": "histone chaperone asf1b-A", "refseq_ac": "NP_996946", "gene_names_uniprotkb": "asf1ba; asf1b", "gene_names_refseq": "asf1ba; asf1b; fc68a10; wu:fc68a10; zgc:77178", "protein_names_uniprotkb": "Histone chaperone asf1b-A; Anti-silencing function protein 1 homolog Ba", "protein_names_refseq": "ASF1 anti-silencing function 1 homolog Ba; ASF1 anti-silencing function 1 homolog B; anti-silencing function protein 1 homolog Ba; anti-silencing function protein 1-B; histone chaperone asf1-B; histone chaperone asf1b-A", "tax_id": 7955, "disease": "breast cancer (Disease Ontology:DOID:1612)", "pathway": " (dre:386897)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EG570331.1, EE704161.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505381, SAMEA4476728 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066417.1., [RefSeq]; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006335 DNA replication-dependent chromatin assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NYY4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NZ03-1", "uniprot_id": "FBSP1_DANRE", "mass": 31298.0, "length": 291, "protein_name": "F-box/SPRY domain-containing protein 1", "gene_name": "fbxo45", "organism": "Zebrafish", "refseq_name": "F-box/SPRY domain-containing protein 1", "refseq_ac": "NP_956889", "gene_names_uniprotkb": "fbxo45; zgc:65875", "gene_names_refseq": "fbxo45; zgc:65875", "protein_names_uniprotkb": "F-box/SPRY domain-containing protein 1; F-box only protein 45", "protein_names_refseq": "F-box only protein 45; F-box/SPRY domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:393567)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056756.1, BC066397.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505390, SAMEA3505392 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056756.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PH10", "ec_number_list": "", "go_molecular_function": "GO:1990756 ubiquitin-like ligase-substrate adaptor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0045202 synapse;GO:0019005 SCF ubiquitin ligase complex;GO:0043226 organelle", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination;GO:0060386 synapse assembly involved in innervation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NZ03-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NZ06-1", "uniprot_id": "ILF2_DANRE", "mass": 42852.0, "length": 387, "protein_name": "Interleukin enhancer-binding factor 2 homolog", "gene_name": "ilf2", "organism": "Zebrafish", "refseq_name": "interleukin enhancer-binding factor 2 homolog", "refseq_ac": "NP_998401", "gene_names_uniprotkb": "ilf2", "gene_names_refseq": "ilf2; wu:fb34h01; zgc:73084; zgc:77276", "protein_names_uniprotkb": "Interleukin enhancer-binding factor 2 homolog", "protein_names_refseq": "interleukin enhancer-binding factor 2 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:406517); (R-DRE-6798695); (R-DRE-9833482)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01004704.1, BC066394.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1, EH440327.1, EH436743.1 and EH577521.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Appears to function predominantly as a heterodimeric complex with ILF3. This complex may function to regulate transcription of undefined genes (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003725 double-stranded RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0035622 intrahepatic bile duct development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6NZ06-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NZT2-1", "uniprot_id": "CDR2L_DANRE", "mass": 53038.0, "length": 464, "protein_name": "Cerebellar degeneration-related protein 2-like", "gene_name": "cdr2l", "organism": "Zebrafish", "refseq_name": "cerebellar degeneration-related protein 2-like", "refseq_ac": "NP_001303823", "gene_names_uniprotkb": "cdr2l; fj58a11; wu:fj58a11; zgc:77462", "gene_names_refseq": "cdr2l; fj58a11; wu:fj58a11; zgc:77462", "protein_names_uniprotkb": "Cerebellar degeneration-related protein 2-like", "protein_names_refseq": "cerebellar degeneration-related protein 2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:336227)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395028.1614252.1, BC155183.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1 and BC065979.1. On Nov 5, 2015 this sequence version replaced XP_005164328.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NZT2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NZW0-1", "uniprot_id": "C102A_DANRE", "mass": 66795.0, "length": 581, "protein_name": "Coiled-coil domain-containing protein 102A", "gene_name": "ccdc102a", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 102A", "refseq_ac": "NP_991115", "gene_names_uniprotkb": "ccdc102a; zgc:77294", "gene_names_refseq": "ccdc102a; si:dkey-107k2.1; wu:fc66e01; zgc:77294", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 102A", "protein_names_refseq": "coiled-coil domain-containing protein 102A", "tax_id": 7955, "disease": "", "pathway": " (dre:325319)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## CDS exon combination :: BC065950.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065950.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016459 myosin complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NZW0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NZZ3-1", "uniprot_id": "CF120_DANRE", "mass": 20982.0, "length": 186, "protein_name": "UPF0669 protein C6orf120 homolog", "gene_name": "zgc:77929", "organism": "Zebrafish", "refseq_name": "UPF0669 protein C6orf120 homolog precursor", "refseq_ac": "NP_991210", "gene_names_uniprotkb": "zgc:77929", "gene_names_refseq": "zgc:77929", "protein_names_uniprotkb": "UPF0669 protein C6orf120 homolog", "protein_names_refseq": "UPF0669 protein C6orf120 homolog precursor; UPF0669 protein C6orf120 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:402944); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065898.1, CK028336.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476766, SAMEA4476772 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065898.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NZZ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6NZZ4-1", "uniprot_id": "TM107_DANRE", "mass": 15312.0, "length": 135, "protein_name": "Transmembrane protein 107", "gene_name": "tmem107", "organism": "Zebrafish", "refseq_name": "transmembrane protein 107", "refseq_ac": "NP_998376", "gene_names_uniprotkb": "tmem107; zgc:77926", "gene_names_refseq": "tmem107; zgc:77926", "protein_names_uniprotkb": "Transmembrane protein 107", "protein_names_refseq": "transmembrane protein 107", "tax_id": 7955, "disease": "Meckel syndrome 13 (Disease Ontology:DOID:0080253); orofaciodigital syndrome XVI (Disease Ontology:DOID:0080254)", "pathway": " (dre:406492)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065897.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065897.1., [RefSeq]; May play a role in cilia formation and embryonic patterning., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0036038 MKS complex", "go_biological_process": "GO:1905515 non-motile cilium assembly;GO:1904491 protein localization to ciliary transition zone", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6NZZ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P036-1", "uniprot_id": "S2533_DANRE", "mass": 34488.0, "length": 314, "protein_name": "Solute carrier family 25 member 33", "gene_name": "slc25a33", "organism": "Zebrafish", "refseq_name": "solute carrier family 25 member 33", "refseq_ac": "NP_998322", "gene_names_uniprotkb": "slc25a33; zgc:65787", "gene_names_refseq": "slc25a33; wu:fe01d11; zgc:65787; zgc:77728", "protein_names_uniprotkb": "Solute carrier family 25 member 33", "protein_names_refseq": "mitochondrial carrier protein; solute carrier family 25 (pyrimidine nucleotide carrier), member 33; solute carrier family 25 member 33", "tax_id": 7955, "disease": "familial hyperinsulinemic hypoglycemia 8 (Disease Ontology:DOID:0081328)", "pathway": " (dre:406436)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056716.1, BC065854.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056716.1., [RefSeq]; Mitochondrial transporter that imports/exports pyrimidine nucleotides into and from mitochondria which participates in dendritic cell endocytosis., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0015218 pyrimidine nucleotide transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:1990519 pyrimidine nucleotide import into mitochondrion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P036-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P0D9-1", "uniprot_id": "CIAO1_DANRE", "mass": 36803.0, "length": 330, "protein_name": "Probable cytosolic iron-sulfur protein assembly protein ciao1", "gene_name": "ciao1", "organism": "Zebrafish", "refseq_name": "probable cytosolic iron-sulfur protein assembly protein ciao1", "refseq_ac": "NP_956441", "gene_names_uniprotkb": "ciao1; si:dkey-49H9.1; wdr39; zgc:55911; zgc:77394", "gene_names_refseq": "ciao1; wdr39; zgc:55911; zgc:77394", "protein_names_uniprotkb": "Probable cytosolic iron-sulfur protein assembly protein ciao1; WD repeat-containing protein 39", "protein_names_refseq": "WD repeat domain 39; cytosolic iron-sulfur protein assembly 1 homolog; probable cytosolic iron-sulfur protein assembly protein ciao1", "tax_id": 7955, "disease": "", "pathway": " (dre:795104)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;38411040", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065658.1, BC044534.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505387 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065658.1. On or before Jan 24, 2008 this sequence version replaced XP_001332791.1, XP_001332877.1, NP_956441.1., [RefSeq]; CIAO1 and MMS19 deficiency: A lethal neurodegenerative phenotype caused by cytosolic Fe-S cluster protein assembly disorders., [RefSeq, PubMed]; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0S611;Q803C8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0097361 cytosolic [4Fe-4S] assembly targeting complex", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0051604 protein maturation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6P0D9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P0G8-1", "uniprot_id": "PKHJ1_DANRE", "mass": 18579.0, "length": 158, "protein_name": "Pleckstrin homology domain-containing family J member 1", "gene_name": "plekhj1", "organism": "Zebrafish", "refseq_name": "pleckstrin homology domain-containing family J member 1", "refseq_ac": "NP_998453", "gene_names_uniprotkb": "plekhj1; zgc:77177", "gene_names_refseq": "plekhj1; zgc:77177", "protein_names_uniprotkb": "Pleckstrin homology domain-containing family J member 1; PH domain-containing family J member 1", "protein_names_refseq": "PH domain-containing family J member 1; pleckstrin homology domain-containing family J member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:406577)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065626.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065626.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005769 early endosome;GO:0005829 cytosol;GO:0055037 recycling endosome;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0007032 endosome organization;GO:0001881 receptor recycling;GO:0042147 retrograde transport, endosome to Golgi", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P0G8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P0S3-1", "uniprot_id": "TM45B_DANRE", "mass": 32760.0, "length": 283, "protein_name": "Transmembrane protein 45B", "gene_name": "tmem45b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 45B", "refseq_ac": "NP_991240", "gene_names_uniprotkb": "tmem45b; zgc:77892", "gene_names_refseq": "tmem45b; zgc:77892", "protein_names_uniprotkb": "Transmembrane protein 45B", "protein_names_refseq": "transmembrane protein 45B", "tax_id": 7955, "disease": "", "pathway": " (dre:402977)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065467.1, EH452072.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065467.1., [RefSeq]; Essential for inflammation- and tissue injury-induced mechanical pain hypersensitivity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0010008 endosome membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0048265 response to pain", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P0S3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P0U3-1", "uniprot_id": "RSLBB_DANRE", "mass": 26974.0, "length": 244, "protein_name": "Ras-like protein family member 11B", "gene_name": "rasl11b", "organism": "Zebrafish", "refseq_name": "ras-like protein family member 11B", "refseq_ac": "NP_956434", "gene_names_uniprotkb": "rasl11b", "gene_names_refseq": "fc21f04; rasl11b; wu:fc21f04; zgc:55750; zgc:77749", "protein_names_uniprotkb": "Ras-like protein family member 11B; 3.6.5.2", "protein_names_refseq": "ras-like protein family member 11B", "tax_id": 7955, "disease": "", "pathway": " (dre:393109)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15033445;18197245", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044471.1, BK001704.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA4476735 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044471.1., [RefSeq]; Rasl11b modifies the effect of Oep on mesendoderm development independently of the main known Oep output: the Nodal signaling pathway Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q001T7;Q803I5", "ec_number_list": "3.6.5.2;3.6.5.3;3.6.5.5;3.6.1.5;3.6.5.-;3.6.1.-;3.6.5.4", "go_molecular_function": "GO:0005525 GTP binding;GO:0003925 G protein activity", "go_cellular_component": "", "go_biological_process": "GO:0048382 mesendoderm development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6P0U3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P116-1", "uniprot_id": "RCOR2_DANRE", "mass": 59791.0, "length": 536, "protein_name": "REST corepressor 2", "gene_name": "rcor2", "organism": "Zebrafish", "refseq_name": "REST corepressor 2", "refseq_ac": "NP_991201", "gene_names_uniprotkb": "rcor2; zgc:77264", "gene_names_refseq": "rcor2; zgc:77264", "protein_names_uniprotkb": "REST corepressor 2", "protein_names_refseq": "REST corepressor 2", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652)", "pathway": " (dre:402934)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065331.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505379 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065331.1., [RefSeq]; May act as a component of a corepressor complex that represses transcription., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005667 transcription regulator complex;GO:0000118 histone deacetylase complex;GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P116-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P2U9-1", "uniprot_id": "CSN3_DANRE", "mass": 47907.0, "length": 423, "protein_name": "COP9 signalosome complex subunit 3", "gene_name": "cops3", "organism": "Zebrafish", "refseq_name": "COP9 signalosome complex subunit 3", "refseq_ac": "NP_955979", "gene_names_uniprotkb": "cops3; csn3; wu:fc32a02", "gene_names_refseq": "cops3; wu:fc32a02; wu:fk59f01; zgc:111903; zgc:55643; zgc:77615", "protein_names_uniprotkb": "COP9 signalosome complex subunit 3; Signalosome subunit 3", "protein_names_refseq": "COP9 constitutive photomorphogenic homolog subunit 3; COP9 signalosome complex subunit 3; signalosome subunit 3", "tax_id": 7955, "disease": "", "pathway": " (dre:335720); (R-DRE-5696394); (R-DRE-6781823); (R-DRE-8856825); (R-DRE-8951664)", "pathway_count": 5, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045415.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045415.1. On Jul 6, 2005 this sequence version replaced XP_702079.1., [RefSeq]; Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes (By similarity). The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7ZVT8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6P2U9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P3K3-1", "uniprot_id": "FBX9_DANRE", "mass": 49371.0, "length": 421, "protein_name": "F-box only protein 9", "gene_name": "fbxo9", "organism": "Zebrafish", "refseq_name": "F-box only protein 9", "refseq_ac": "NP_956012", "gene_names_uniprotkb": "fbxo9; si:ch211-71k24.1; wu:fc79g12; zgc:56212; zgc:77654", "gene_names_refseq": "fbxo9; wu:fc79g12; zgc:56212; zgc:77654", "protein_names_uniprotkb": "F-box only protein 9", "protein_names_refseq": "F-box only protein 9", "tax_id": 7955, "disease": "Parkinson's disease (Disease Ontology:DOID:14330)", "pathway": " (dre:325469); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC063957.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH446259.1, EH446633.1, EH503221.1, EH472486.1 and AI942954.1. On Jun 14, 2012 this sequence version replaced NP_957373.1., [RefSeq]; Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins and acts as a regulator of mTOR signaling., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DG26", "ec_number_list": "", "go_molecular_function": "GO:1990756 ubiquitin-like ligase-substrate adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0032006 regulation of TOR signaling;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6P3K3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P5I8-1", "uniprot_id": "YIPF5_DANRE", "mass": 27877.0, "length": 257, "protein_name": "Protein YIPF5", "gene_name": "yipf5", "organism": "Zebrafish", "refseq_name": "protein YIPF5", "refseq_ac": "NP_956589", "gene_names_uniprotkb": "yipf5; zgc:56513; zgc:77939", "gene_names_refseq": "SMAP-5; yipf5; zgc:56513; zgc:77939", "protein_names_uniprotkb": "Protein YIPF5; YIP1 family member 5", "protein_names_refseq": "YIP1 family member 5; golgi membrane protein SB140; protein YIPF5", "tax_id": 7955, "disease": "azoospermia (Disease Ontology:DOID:14227)", "pathway": " (dre:393265)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049469.1, BC062871.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049469.1., [RefSeq]; Plays a role in transport between endoplasmic reticulum and Golgi., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6TNQ6;Q7ZWD2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0060628 regulation of ER to Golgi vesicle-mediated transport;GO:0015031 protein transport;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0048280 vesicle fusion with Golgi apparatus", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6P5I8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P5L3-1", "uniprot_id": "RL19_DANRE", "mass": 23453.0, "length": 196, "protein_name": "Large ribosomal subunit protein eL19", "gene_name": "rpl19", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein eL19", "refseq_ac": "NP_998373", "gene_names_uniprotkb": "rpl19; zgc:77733", "gene_names_refseq": "rpl19; wu:fa91e07; wu:fb12d12; zgc:77733", "protein_names_uniprotkb": "Large ribosomal subunit protein eL19; 60S ribosomal protein L19", "protein_names_refseq": "60s ribosomal protein L19; large ribosomal subunit protein eL19", "tax_id": 7955, "disease": "", "pathway": " (dre:406489); (R-DRE-156827); (R-DRE-1799339); (R-DRE-6791226); (R-DRE-72689); (R-DRE-975956); (R-DRE-975957); (R-DRE-9954709); (R-DRE-9954714); (R-DRE-9954716)", "pathway_count": 10, "publication_count": 1, "publication_id_list": "15256591", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC062844.1, CO934795.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC062844.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DRK1", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0022625 cytosolic large ribosomal subunit", "go_biological_process": "GO:0030097 hemopoiesis;GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6P5L3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P5L8-1", "uniprot_id": "HSDL2_DANRE", "mass": 44421.0, "length": 415, "protein_name": "Hydroxysteroid dehydrogenase-like protein 2", "gene_name": "hsdl2", "organism": "Zebrafish", "refseq_name": "hydroxysteroid dehydrogenase-like protein 2", "refseq_ac": "NP_955893", "gene_names_uniprotkb": "hsdl2", "gene_names_refseq": "hsdl2; wu:fb58f08; zgc:73140; zgc:77693", "protein_names_uniprotkb": "Hydroxysteroid dehydrogenase-like protein 2; 1.-.-.-", "protein_names_refseq": "hydroxysteroid dehydrogenase-like protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:322347)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC062838.1, BC059502.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC062838.1., [RefSeq]; Has apparently no steroid dehydrogenase activity. Might act as a metabolic regulator that affects systemic adaptation to nutritional cues., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P5L8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P5M5-1", "uniprot_id": "Q6P5M5_DANRE", "mass": 20372.0, "length": 180, "protein_name": "ADP-ribosylation factor", "gene_name": "wu:fi36f11", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC334219", "refseq_ac": "NP_956170", "gene_names_uniprotkb": "wu:fi36f11; fi36f11; zgc:77650", "gene_names_refseq": "fi36f11; wu:fi36f11; zgc:77650", "protein_names_uniprotkb": "ADP-ribosylation factor", "protein_names_refseq": "uncharacterized protein LOC334219", "tax_id": 7955, "disease": "", "pathway": " (dre:334219); (R-DRE-6807878); (R-DRE-6811434)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC062831.1, EG575940.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BC062831.1., [RefSeq]; GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8Q6A7;A0A2R8QPR0", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6P5M5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P606-1", "uniprot_id": "LYSM4_DANRE", "mass": 30171.0, "length": 267, "protein_name": "LysM and putative peptidoglycan-binding domain-containing protein 4", "gene_name": "lysmd4", "organism": "Zebrafish", "refseq_name": "lysM and putative peptidoglycan-binding domain-containing protein 4", "refseq_ac": "NP_957144", "gene_names_uniprotkb": "lysmd4; si:cr925803.2; si:dkey-111m11.2; si:dkeyp-82d11.1; zgc:77861", "gene_names_refseq": "lysmd4; si:cr925803.2; si:dkey-111m11.2; zgc:77861", "protein_names_uniprotkb": "LysM and putative peptidoglycan-binding domain-containing protein 4", "protein_names_refseq": "lysM and putative peptidoglycan-binding domain-containing protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100149102)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC062528.1, GDQH01017765.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On Oct 26, 2010 this sequence version replaced NP_957144.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A5WV08;A8E7R1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6P606-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P7Y3-1", "uniprot_id": "PR38B_DANRE", "mass": 59477.0, "length": 501, "protein_name": "Pre-mRNA-splicing factor 38B", "gene_name": "prpf38b", "organism": "Zebrafish", "refseq_name": "pre-mRNA-splicing factor 38B isoform 1", "refseq_ac": "NP_998654", "gene_names_uniprotkb": "prpf38b; wu:fc43b05; zgc:63496", "gene_names_refseq": "prpf38b; wu:fc43b05; zgc:63496", "protein_names_uniprotkb": "Pre-mRNA-splicing factor 38B", "protein_names_refseq": "PRP38 pre-mRNA processing factor 38 domain containing B; pre-mRNA-splicing factor 38B isoform 1; pre-mRNA-splicing factor 38B", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395012.27439.1, SRR26395014.768255.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505378 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On or before Jul 8, 2025 this sequence version replaced XP_073771131.1, NP_998654.1., [RefSeq]; May be required for pre-mRNA splicing., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0071011 precatalytic spliceosome", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P7Y3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6P950-1", "uniprot_id": "PR3CB_DANRE", "mass": 36323.0, "length": 317, "protein_name": "Protein phosphatase 1 regulatory subunit 3C-B", "gene_name": "ppp1r3cb", "organism": "Zebrafish", "refseq_name": "protein phosphatase 1 regulatory subunit 3C-B", "refseq_ac": "NP_957128", "gene_names_uniprotkb": "ppp1r3cb; ppp1r3c; zgc:73259", "gene_names_refseq": "ppp1r3cb; ppp1r3c; zgc:73259", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 3C-B", "protein_names_refseq": "protein phosphatase 1 regulatory subunit 3C-B; protein phosphatase 1 regulatory subunit 3C; protein phosphatase 1, regulatory (inhibitor) subunit 3Cb", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:393807); (R-DRE-3322077)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CK127184.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC060926.1., [RefSeq]; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008157 protein phosphatase 1 binding;GO:0019903 protein phosphatase binding;GO:2001069 glycogen binding", "go_cellular_component": "GO:0000164 protein phosphatase type 1 complex", "go_biological_process": "GO:0005977 glycogen metabolic process;GO:0005978 glycogen biosynthetic process;GO:0005979 regulation of glycogen biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6P950-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBA2-1", "uniprot_id": "LS12A_DANRE", "mass": 21612.0, "length": 196, "protein_name": "Protein LSM12 homolog A", "gene_name": "lsm12a", "organism": "Zebrafish", "refseq_name": "protein LSM12 homolog A", "refseq_ac": "NP_998313", "gene_names_uniprotkb": "lsm12a; lsm12", "gene_names_refseq": "lsm12a; lsm12b; lsm12; wu:fe01f11; zgc:66039", "protein_names_uniprotkb": "Protein LSM12 homolog A", "protein_names_refseq": "protein LSM12 homolog A", "tax_id": 7955, "disease": "", "pathway": " (dre:406422)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059805.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476820 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059805.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBA2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBA8-1", "uniprot_id": "MNS1_DANRE", "mass": 60446.0, "length": 486, "protein_name": "Meiosis-specific nuclear structural protein 1", "gene_name": "mns1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "mns1; zgc:65845", "gene_names_refseq": "", "protein_names_uniprotkb": "Meiosis-specific nuclear structural protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "visceral heterotaxy 9 (Disease Ontology:DOID:0051023)", "pathway": " (dre:573382)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating (By similarity). May play a role in the control of meiotic division and germ cell differentiation through regulation of pairing and recombination during meiosis (By similarity). Required for sperm flagella assembly (By similarity). May play a role in the assembly and function of the outer dynein arm-docking complex (ODA-DC). ODA-DC mediates outer dynein arms (ODA) binding onto the axonemal doublet microtubules (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0031514 motile cilium;GO:0005930 axoneme;GO:0005879 axonemal microtubule", "go_biological_process": "GO:0035082 axoneme assembly;GO:0051321 meiotic cell cycle;GO:0044782 cilium organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBA8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBH5-1", "uniprot_id": "CXFA4_DANRE", "mass": 9417.0, "length": 82, "protein_name": "Cytochrome c oxidase subunit FA4", "gene_name": "coxfa4", "organism": "Zebrafish", "refseq_name": "cytochrome c oxidase subunit FA4", "refseq_ac": "NP_998190", "gene_names_uniprotkb": "coxfa4; ndufa4; zgc:73405", "gene_names_refseq": "coxfa4b; coxfa4; ndufa4b; ndufa4; zgc:73405", "protein_names_uniprotkb": "Cytochrome c oxidase subunit FA4; Cytochrome c oxidase subunit NDUFA4", "protein_names_refseq": "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4; NADH:ubiquinone oxidoreductase subunit A4; NDUFA4 mitochondrial complex associated b; cytochrome c oxidase subunit FA4; cytochrome c oxidase subunit NDUFA4", "tax_id": 7955, "disease": "mitochondrial complex IV deficiency nuclear type 21 (Disease Ontology:DOID:0070506)", "pathway": " (dre:406298); (R-DRE-5628897); (R-DRE-611105); (R-DRE-9707564); (R-DRE-9864848)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CK030409.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059706.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules unsing 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix. COXFA4 is required for complex IV maintenance., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0045277 respiratory chain complex IV", "go_biological_process": "GO:0022904 respiratory electron transport chain", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBH5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBI2-1", "uniprot_id": "PDPFB_DANRE", "mass": 12084.0, "length": 115, "protein_name": "Pancreatic progenitor cell differentiation and proliferation factor B", "gene_name": "ppdpfb", "organism": "Zebrafish", "refseq_name": "pancreatic progenitor cell differentiation and proliferation factor B", "refseq_ac": "NP_956302", "gene_names_uniprotkb": "ppdpfb; exdpfb", "gene_names_refseq": "c20orf149b; c20orf149l; ppdpfb; wu:fj62f01; zgc:73395", "protein_names_uniprotkb": "Pancreatic progenitor cell differentiation and proliferation factor B; Exocrine differentiation and proliferation factor B", "protein_names_refseq": "chromosome 20 open reading frame 149, like; endocrine differentiation and proliferation factor; endpf; exocrine differentiation and proliferation factor B; pancreatic progenitor cell differentiation and proliferation factor B", "tax_id": 7955, "disease": "metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208)", "pathway": " (dre:336303)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CO913873.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476732, SAMEA4476735 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059699.1., [RefSeq]; Probable regulator of exocrine pancreas development., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBI2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBI5-1", "uniprot_id": "RS25_DANRE", "mass": 13860.0, "length": 124, "protein_name": "Small ribosomal subunit protein eS25", "gene_name": "rps25", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein eS25", "refseq_ac": "NP_957109", "gene_names_uniprotkb": "rps25; zgc:73391", "gene_names_refseq": "rps25; zgc:73391", "protein_names_uniprotkb": "Small ribosomal subunit protein eS25; 40S ribosomal protein S25", "protein_names_refseq": "40S ribosomal protein S25; small ribosomal subunit protein eS25", "tax_id": 7955, "disease": "", "pathway": " (dre:393788); (R-DRE-156827); (R-DRE-1799339); (R-DRE-6791226); (R-DRE-72649); (R-DRE-72689); (R-DRE-72695); (R-DRE-72702); (R-DRE-975956); (R-DRE-975957); (R-DRE-9954714); (R-DRE-9954716)", "pathway_count": 12, "publication_count": 2, "publication_id_list": "31549395;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CN507189.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059695.1. On Jul 6, 2005 this sequence version replaced XP_702371.1., [RefSeq]; Component of the small ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell., [UniProtKB, UniProtKB]; Lncrps25 play an essential role in motor neuron development through controlling the expression of olig2 in zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0022627 cytosolic small ribosomal subunit", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6PBI5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBI8-1", "uniprot_id": "TM177_DANRE", "mass": 34029.0, "length": 310, "protein_name": "Transmembrane protein 177", "gene_name": "tmem177", "organism": "Zebrafish", "refseq_name": "transmembrane protein 177", "refseq_ac": "NP_955888", "gene_names_uniprotkb": "tmem177; zgc:73384", "gene_names_refseq": "fb55d01; tmem177; wu:fb55d01; zgc:73384", "protein_names_uniprotkb": "Transmembrane protein 177", "protein_names_refseq": "transmembrane protein 177", "tax_id": 7955, "disease": "", "pathway": " (dre:556875); (R-DRE-9864848)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH507366.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476799, SAMEA4476818 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059692.1. On Mar 27, 2013 this sequence version replaced NP_001099055.1., [RefSeq]; Plays a role in the early steps of cytochrome c oxidase subunit II (MT-CO2/COX2) maturation and is required for the stabilization of COX20 and the newly synthesized MT-CO2/COX2 protein., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBI8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBK1-1", "uniprot_id": "MIX23_DANRE", "mass": 16370.0, "length": 144, "protein_name": "Protein MIX23", "gene_name": "mix23", "organism": "Zebrafish", "refseq_name": "protein MIX23", "refseq_ac": "NP_957101", "gene_names_uniprotkb": "mix23; ccdc58; zgc:73369", "gene_names_refseq": "ccdc58; mix23; zgc:73369", "protein_names_uniprotkb": "Protein MIX23; Coiled-coil domain-containing protein 58", "protein_names_refseq": "coiled-coil domain containing 58; coiled-coil domain-containing protein 58; protein MIX23", "tax_id": 7955, "disease": "", "pathway": " (dre:393780)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BQ263466.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505390, SAMEA4476728 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059679.1. On Jul 6, 2005 this sequence version replaced XP_702369.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005758 mitochondrial intermembrane space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBK1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBK8-1", "uniprot_id": "RPRMB_DANRE", "mass": 11006.0, "length": 102, "protein_name": "Protein reprimo B", "gene_name": "rprmb", "organism": "Zebrafish", "refseq_name": "protein reprimo B", "refseq_ac": "NP_957100", "gene_names_uniprotkb": "rprmb; rprm; zgc:73361", "gene_names_refseq": "rprmb; rprm; zgc:73361", "protein_names_uniprotkb": "Protein reprimo B", "protein_names_refseq": "protein reprimo B", "tax_id": 7955, "disease": "", "pathway": " (dre:393779)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059672.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059672.1. On Mar 12, 2008 this sequence version replaced XP_001333739.1., [RefSeq]; May be involved in the regulation of p53-dependent G2 arrest of the cell cycle., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBK8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBM7-1", "uniprot_id": "FA76B_DANRE", "mass": 37691.0, "length": 328, "protein_name": "Protein FAM76B", "gene_name": "fam76b", "organism": "Zebrafish", "refseq_name": "protein FAM76B", "refseq_ac": "NP_956226", "gene_names_uniprotkb": "fam76b; fa11h02; wu:fa11h02; zgc:73333", "gene_names_refseq": "fa11h02; fam76b; wu:fa11h02; zgc:73333", "protein_names_uniprotkb": "Protein FAM76B", "protein_names_refseq": "protein FAM76B", "tax_id": 7955, "disease": "", "pathway": " (dre:335015)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "18307296;37838209;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059652.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059652.1. On Jul 6, 2005 this sequence version replaced XP_702171.1., [RefSeq]; Plays a role in hematopoiesis and immune system development, and participates in the inflammatory response., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016607 nuclear speck", "go_biological_process": "GO:0035162 embryonic hemopoiesis;GO:0050776 regulation of immune response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6PBM7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBM8-1", "uniprot_id": "RBM18_DANRE", "mass": 21496.0, "length": 188, "protein_name": "Probable RNA-binding protein 18", "gene_name": "rbm18", "organism": "Zebrafish", "refseq_name": "probable RNA-binding protein 18", "refseq_ac": "NP_957087", "gene_names_uniprotkb": "rbm18; zgc:73332", "gene_names_refseq": "rbm18; zgc:73332", "protein_names_uniprotkb": "Probable RNA-binding protein 18; RNA-binding motif protein 18", "protein_names_refseq": "probable RNA-binding protein 18", "tax_id": 7955, "disease": "", "pathway": " (dre:393766)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CN510447.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059651.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBM8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBN4-1", "uniprot_id": "CQ10X_DANRE", "mass": 26631.0, "length": 233, "protein_name": "Coenzyme Q-binding protein COQ10 homolog, mitochondrial", "gene_name": "zgc:73324", "organism": "Zebrafish", "refseq_name": "coenzyme Q-binding protein COQ10 homolog, mitochondrial", "refseq_ac": "NP_957083", "gene_names_uniprotkb": "zgc:73324", "gene_names_refseq": "si:ch73-141c7.1; zgc:73324", "protein_names_uniprotkb": "Coenzyme Q-binding protein COQ10 homolog, mitochondrial", "protein_names_refseq": "coenzyme Q-binding protein COQ10 homolog, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:393762)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071353.1, BC059644.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071353.1. On Jan 16, 2010 this sequence version replaced NP_957083.1., [RefSeq]; Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6IQQ1", "ec_number_list": "", "go_molecular_function": "GO:0048039 ubiquinone binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0045333 cellular respiration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBN4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBN9-1", "uniprot_id": "Q6PBN9_DANRE", "mass": 8157.0, "length": 73, "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "gngt1", "organism": "Zebrafish", "refseq_name": "guanine nucleotide-binding protein G(T) subunit gamma-T1", "refseq_ac": "NP_956261", "gene_names_uniprotkb": "gngt1; gng1; wu:fk53d06; zgc:73318", "gene_names_refseq": "gng1; gngt1; wu:fk53d06; zgc:73318", "protein_names_uniprotkb": "Guanine nucleotide-binding protein subunit gamma", "protein_names_refseq": "guanine nucleotide binding protein (G protein), gamma 1 subunit; guanine nucleotide-binding protein G(T) subunit gamma-T1", "tax_id": 7955, "disease": "obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:335656); (R-DRE-202040); (R-DRE-2485179); (R-DRE-2514859); (R-DRE-381676); (R-DRE-392170); (R-DRE-400042); (R-DRE-416476); (R-DRE-418594); (R-DRE-418597); (R-DRE-420092); (R-DRE-428930); (R-DRE-432040); (R-DRE-456926); (R-DRE-9856530)", "pathway_count": 15, "publication_count": 10, "publication_id_list": "16379021;17306630;19422270;19786091;21699975;32678143;33105605;33129528;34462505;37507475", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: DN856954.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059639.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction., [UniProtKB, UniProtKB]; The C-terminus of gngt1 is responsible for its ability to disrupt primordial germ cell migration., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6P4M1;Q1LXK9", "ec_number_list": "", "go_molecular_function": "GO:0031681 G-protein beta-subunit binding", "go_cellular_component": "GO:0005834 heterotrimeric G-protein complex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q6PBN9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBR5-1", "uniprot_id": "Q6PBR5_DANRE", "mass": 13323.0, "length": 118, "protein_name": "V-type proton ATPase subunit G", "gene_name": "atp6v1g1", "organism": "Zebrafish", "refseq_name": "V-type proton ATPase subunit G 1", "refseq_ac": "NP_956228", "gene_names_uniprotkb": "atp6v1g1; wu:fa12a02; wu:fq38h02; zgc:73282", "gene_names_refseq": "atp6v1g1; wu:fa12a02; wu:fq38h02; zgc:73282", "protein_names_uniprotkb": "V-type proton ATPase subunit G", "protein_names_refseq": "ATPase, H+ transporting, V1 subunit G; ATPase, H+ transporting, lysosomal, V1 subunit G1; V-type proton ATPase subunit G 1", "tax_id": 7955, "disease": "", "pathway": " (dre:335025); (R-DRE-1222556); (R-DRE-77387); (R-DRE-917977); (R-DRE-9639288); (R-DRE-983712)", "pathway_count": 6, "publication_count": 10, "publication_id_list": "16109975;16448862;17490614;19898487;26254189;28252024;30082823;32033529;37070960;40044042", "class_list": "", "function": "Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8PZ13;F6NPY8", "ec_number_list": "", "go_molecular_function": "GO:0046961 proton-transporting ATPase activity, rotational mechanism", "go_cellular_component": "GO:0030672 synaptic vesicle membrane;GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain", "go_biological_process": "GO:0097401 synaptic vesicle lumen acidification", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q6PBR5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBR7-1", "uniprot_id": "RT63_DANRE", "mass": 12655.0, "length": 103, "protein_name": "Large ribosomal subunit protein mL63", "gene_name": "mrpl57", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein mL63", "refseq_ac": "NP_957069", "gene_names_uniprotkb": "mrpl57; mrp63; zgc:73280", "gene_names_refseq": "mrp63; mrpl57; zgc:73280", "protein_names_uniprotkb": "Large ribosomal subunit protein mL63; Mitochondrial ribosomal protein 63; Mitochondrial ribosomal protein L57; Ribosomal protein 63, mitochondrial", "protein_names_refseq": "large ribosomal subunit protein mL63; mitochondrial ribosomal protein 63; ribosomal protein 63, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:393748); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH453794.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476756, SAMEA4476761 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059609.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:1990904 ribonucleoprotein complex;GO:0005761 mitochondrial ribosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBR7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBT6-1", "uniprot_id": "GFRP_DANRE", "mass": 10018.0, "length": 89, "protein_name": "GTP cyclohydrolase 1 feedback regulatory protein", "gene_name": "gchfr", "organism": "Zebrafish", "refseq_name": "GTP cyclohydrolase 1 feedback regulatory protein", "refseq_ac": "NP_957056", "gene_names_uniprotkb": "gchfr; zgc:73253", "gene_names_refseq": "gchfr; zgc:73253", "protein_names_uniprotkb": "GTP cyclohydrolase 1 feedback regulatory protein; GFRP; GTP cyclohydrolase I feedback regulatory protein", "protein_names_refseq": "GFRP; GTP cyclohydrolase 1 feedback regulatory protein; GTP cyclohydrolase I feedback regulatory protein", "tax_id": 7955, "disease": "", "pathway": " (dre:393735); (R-DRE-1474151)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH551858.1, EH454555.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH551858.1 and EH535515.1., [RefSeq]; Mediates tetrahydrobiopterin inhibition of GTP cyclohydrolase 1., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0044549 GTP cyclohydrolase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0031965 nuclear membrane", "go_biological_process": "GO:0009890 negative regulation of biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBT6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBV4-1", "uniprot_id": "RWDD3_DANRE", "mass": 29655.0, "length": 257, "protein_name": "RWD domain-containing protein 3", "gene_name": "rwdd3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "rwdd3; zgc:73229", "gene_names_refseq": "", "protein_names_uniprotkb": "RWD domain-containing protein 3", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:393729)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Enhancer of SUMO conjugation. Increases SUMO conjugation to proteins by promoting the: binding of E1 and E2 enzymes, thioester linkage between SUMO and ube2i/ubc9 and transfer of SUMO to specific target proteins which include hif1a, pias, nfkbia, nr3c1 and top1. Has no effect on ubiquitination (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:1902073 positive regulation of hypoxia-inducible factor-1alpha signaling pathway;GO:0010468 regulation of gene expression;GO:0033235 positive regulation of protein sumoylation;GO:0033554 cellular response to stress", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PBV4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBY3-1", "uniprot_id": "EDF1_DANRE", "mass": 16075.0, "length": 146, "protein_name": "Endothelial differentiation-related factor 1 homolog", "gene_name": "edf1", "organism": "Zebrafish", "refseq_name": "endothelial differentiation-related factor 1 homolog", "refseq_ac": "NP_957039", "gene_names_uniprotkb": "edf1; zgc:73192; zgc:86829", "gene_names_refseq": "edf1; zgc:73192; zgc:86829", "protein_names_uniprotkb": "Endothelial differentiation-related factor 1 homolog; EDF-1", "protein_names_refseq": "EDF-1; endothelial differentiation-related factor 1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:793036)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH498433.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059541.1. On Nov 15, 2007 this sequence version replaced XP_001332531.1., [RefSeq]; Probable transcriptional coactivator., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6PBY3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PBZ5-1", "uniprot_id": "Q6PBZ5_DANRE", "mass": 16933.0, "length": 148, "protein_name": "Allograft inflammatory factor 1-like", "gene_name": "aif1l", "organism": "Zebrafish", "refseq_name": "allograft inflammatory factor 1-like", "refseq_ac": "NP_942571", "gene_names_uniprotkb": "aif1l; aif1; cb10; fa04b11; sb:cb10; wu:fa04b11; wu:fi14f08; zgc:73179", "gene_names_refseq": "aif1l; aif1; cb10; fa04b11; sb:cb10; wu:fa04b11; wu:fi14f08; zgc:73179", "protein_names_uniprotkb": "Allograft inflammatory factor 1-like", "protein_names_refseq": "allograft inflammatory factor 1-like", "tax_id": 7955, "disease": "breast cancer (Disease Ontology:DOID:1612)", "pathway": " (dre:321033)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "21379331;26469318;27189481;35714800;37196825", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EE303697.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059529.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2BHD6", "ec_number_list": "", "go_molecular_function": "GO:0051015 actin filament binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0032587 ruffle membrane", "go_biological_process": "GO:0051017 actin filament bundle assembly;GO:0097178 ruffle assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6PBZ5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PC14-1", "uniprot_id": "RL23_DANRE", "mass": 14881.0, "length": 140, "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "rpl23", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein uL14", "refseq_ac": "NP_957026", "gene_names_uniprotkb": "rpl23; zgc:73149", "gene_names_refseq": "fb06e03; rpl23; wu:fb06e03; zgc:73149", "protein_names_uniprotkb": "Large ribosomal subunit protein uL14; 60S ribosomal protein L23", "protein_names_refseq": "60S ribosomal protein L23; large ribosomal subunit protein uL14", "tax_id": 7955, "disease": "", "pathway": " (dre:336812); (R-DRE-156827); (R-DRE-1799339); (R-DRE-6791226); (R-DRE-72689); (R-DRE-975956); (R-DRE-975957); (R-DRE-9954709); (R-DRE-9954714); (R-DRE-9954716)", "pathway_count": 10, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH536101.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059509.1., [RefSeq]; Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7ZWJ5", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome;GO:0070180 large ribosomal subunit rRNA binding", "go_cellular_component": "GO:0022625 cytosolic large ribosomal subunit", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6PC14-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PC40-1", "uniprot_id": "CD123_DANRE", "mass": 39887.0, "length": 348, "protein_name": "Translation initiation factor eIF2 assembly protein", "gene_name": "cdc123", "organism": "Zebrafish", "refseq_name": "translation initiation factor eIF2 assembly protein", "refseq_ac": "NP_957015", "gene_names_uniprotkb": "cdc123; c10orf7; zgc:73119", "gene_names_refseq": "c10orf7; cdc123; zgc:73119", "protein_names_uniprotkb": "Translation initiation factor eIF2 assembly protein; Cell division cycle protein 123 homolog", "protein_names_refseq": "cell division cycle protein 123 homolog; translation initiation factor eIF2 assembly protein", "tax_id": 7955, "disease": "", "pathway": " (dre:393694)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC071332.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059483.1., [RefSeq]; ATP-dependent protein-folding chaperone for the eIF2 complex (By similarity). Binds to the gamma subunit of the eIF2 complex which allows the subunit to assemble with the alpha and beta subunits (By similarity)., [UniProtKB, UniProtKB, UniProtKB]; ATP-dependent protein-folding chaperone for the eIF2 complex. Binds to the gamma subunit of the eIF2 complex which allows the subunit to assemble with the alpha and beta subunits., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0044183 protein folding chaperone;GO:0046872 metal ion binding;GO:0003743 translation initiation factor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:1905143 eukaryotic translation initiation factor 2 complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6PC40-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PC45-1", "uniprot_id": "MED30_DANRE", "mass": 20201.0, "length": 174, "protein_name": "Mediator of RNA polymerase II transcription subunit 30", "gene_name": "med30", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 30", "refseq_ac": "NP_957011", "gene_names_uniprotkb": "med30; thrap6; zgc:73113", "gene_names_refseq": "med30; thrap6; zgc:73113", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 30; Mediator complex subunit 30; Thyroid hormone receptor-associated protein 6 homolog", "protein_names_refseq": "mediator of RNA polymerase II transcription subunit 30; thyroid hormone receptor associated protein 6; thyroid hormone receptor-associated protein 6 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:393690)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EG578819.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059478.1. On Jul 6, 2005 this sequence version replaced XP_702336.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PC45-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PC62-1", "uniprot_id": "SPG21_DANRE", "mass": 35571.0, "length": 311, "protein_name": "Maspardin", "gene_name": "spg21", "organism": "Zebrafish", "refseq_name": "maspardin", "refseq_ac": "NP_998560", "gene_names_uniprotkb": "spg21; wu:fd07h02; zgc:73091", "gene_names_refseq": "spg21; wu:fd07h02; zgc:73091", "protein_names_uniprotkb": "Maspardin; Spastic paraplegia 21 autosomal recessive Mast syndrome protein homolog", "protein_names_refseq": "acid cluster protein 33; maspardin; spastic paraplegia 21 (autosomal recessive, Mast syndrome); spastic paraplegia 21 autosomal recessive Mast syndrome protein homolog", "tax_id": 7955, "disease": "Mast syndrome (Disease Ontology:DOID:0060245); hereditary spastic paraplegia (Disease Ontology:DOID:2476)", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## CDS exon combination :: BC059461.1 [ECO:0000331] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059461.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0042609 CD4 receptor binding", "go_cellular_component": "GO:0005829 cytosol;GO:0030140 trans-Golgi network transport vesicle", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6PC62-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PCS4-1", "uniprot_id": "RHG29_DANRE", "mass": 147666.0, "length": 1337, "protein_name": "Rho GTPase-activating protein 29", "gene_name": "arhgap29b; arhgap29", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "arhgap29b; arhgap29; arhgap29; sb:cb905; zgc:63950", "gene_names_refseq": "", "protein_names_uniprotkb": "Rho GTPase-activating protein 29; Rho-type GTPase-activating protein 29", "protein_names_refseq": "", "tax_id": 7955, "disease": "EEC syndrome (Disease Ontology:DOID:0060782)", "pathway": " (dre:378998); (R-DRE-8980692); (R-DRE-9013148); (R-DRE-9013149)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. Has strong activity toward RHOA, and weaker activity toward RAC1 and CDC42 (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0007165 signal transduction;GO:0051058 negative regulation of small GTPase mediated signal transduction;GO:0051056 regulation of small GTPase mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PCS4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PCS6-1", "uniprot_id": "MTFP1_DANRE", "mass": 17984.0, "length": 165, "protein_name": "Mitochondrial fission process protein 1", "gene_name": "mtfp1", "organism": "Zebrafish", "refseq_name": "mitochondrial fission process protein 1", "refseq_ac": "NP_956980", "gene_names_uniprotkb": "mtfp1; MTP18; mtp18; zgc:63910", "gene_names_refseq": "MTP18; mtfp1; zgc:63910", "protein_names_uniprotkb": "Mitochondrial fission process protein 1; MTP18; Mitochondrial 18 kDa protein", "protein_names_refseq": "mitochondrial 18 kDa protein; mitochondrial fission process protein 1; mitochondrial fission protein MTP18", "tax_id": 7955, "disease": "Parkinson's disease 6 (Disease Ontology:DOID:0060369); neuroblastoma (Disease Ontology:DOID:769)", "pathway": " (dre:393659)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01047098.1, GO938404.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA4476790 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On or before Jun 27, 2025 this sequence version replaced XP_073806126.1, NP_956980.2., [RefSeq]; Plays a role in the regulation of mitochondrial morphology. Inhibits mitochondrial fusion., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0006915 apoptotic process;GO:0000266 mitochondrial fission", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PCS6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PD83-1", "uniprot_id": "5MP2A_DANRE", "mass": 48076.0, "length": 419, "protein_name": "eIF5-mimic protein 2-A", "gene_name": "bzw1a", "organism": "Zebrafish", "refseq_name": "eIF5-mimic protein 2-A", "refseq_ac": "NP_956002", "gene_names_uniprotkb": "bzw1a; 5mp2a; bzw1; si:ch211-246m6.3; zgc:63787", "gene_names_refseq": "bzw1a; bzw1; wu:fc60e05; zgc:63787", "protein_names_uniprotkb": "eIF5-mimic protein 2-A; Basic leucine zipper and W2 domain-containing protein 1-A", "protein_names_refseq": "basic leucine zipper and W2 domain-containing protein 1-A; basic leucine zipper and W2 domains 1; eIF5-mimic protein 2-A", "tax_id": 7955, "disease": "", "pathway": " (dre:325226)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC058875.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC058875.1., [RefSeq]; Translation initiation regulator which may repress repeat-associated non-AUG (RAN) initiated translation probably by acting as a competitive inhibitor of eukaryotic translation initiation factor 5 (EIF5) function (By similarity). Enhances histone H4 gene transcription but does not seem to bind DNA directly (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006446 regulation of translational initiation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6PD83-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PEH5-1", "uniprot_id": "UB2V2_DANRE", "mass": 16324.0, "length": 145, "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "ube2v2", "organism": "Zebrafish", "refseq_name": "ubiquitin-conjugating enzyme E2 variant 2", "refseq_ac": "NP_998680", "gene_names_uniprotkb": "ube2v2; zgc:63717", "gene_names_refseq": "ube2v2; wu:fb18b11; wu:fb24d11; zgc:63717", "protein_names_uniprotkb": "Ubiquitin-conjugating enzyme E2 variant 2", "protein_names_refseq": "Drmms2; ubiquitin-conjugating enzyme E2 variant 2", "tax_id": 7955, "disease": "", "pathway": " (dre:406836); (R-DRE-5693565); (R-DRE-5693571); (R-DRE-5693607); (R-DRE-8866654); (R-DRE-983168)", "pathway_count": 6, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC058061.1, EV754994.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476740, SAMEA4476814 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC058061.1., [RefSeq]; Has no ubiquitin ligase activity on its own. The ube2v2/ube2n heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0031371 ubiquitin conjugating enzyme complex;GO:0005634 nucleus", "go_biological_process": "GO:0070534 protein K63-linked ubiquitination;GO:0006301 DNA damage tolerance", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6PEH5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PFL6-1", "uniprot_id": "CCD43_DANRE", "mass": 24559.0, "length": 213, "protein_name": "Coiled-coil domain-containing protein 43", "gene_name": "ccdc43", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 43", "refseq_ac": "NP_956952", "gene_names_uniprotkb": "ccdc43; zgc:66277", "gene_names_refseq": "ccdc43; zgc:66277", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 43", "protein_names_refseq": "coiled-coil domain-containing protein 43", "tax_id": 7955, "disease": "", "pathway": " (dre:393631)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC057502.1, BC155274.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC057502.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PFL6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PFT6-1", "uniprot_id": "TMM47_DANRE", "mass": 19947.0, "length": 181, "protein_name": "Transmembrane protein 47", "gene_name": "tmem47", "organism": "Zebrafish", "refseq_name": "transmembrane protein 47", "refseq_ac": "NP_999928", "gene_names_uniprotkb": "tmem47; tm4sf10; zgc:63990", "gene_names_refseq": "cldn12l; tmem47; wu:fb99e01; zgc:63990", "protein_names_uniprotkb": "Transmembrane protein 47; Transmembrane 4 superfamily member 10", "protein_names_refseq": "transmembrane 4 superfamily member 10; transmembrane protein 47", "tax_id": 7955, "disease": "", "pathway": " (dre:406640)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "37882518", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH543648.1, SRR32588724.2406142.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476733, SAMEA4476776 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH543648.1 and JBMGRA010000008.1. On Feb 23, 2016 this sequence version replaced XP_005166865.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Regulates cell junction organization in epithelial cells., [UniProtKB, UniProtKB, UniProtKB]; Zebrafish TMEM47 is an effective blocker of IFN production during RNA and DNA virus infection., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005911 cell-cell junction;GO:0005912 adherens junction;GO:0016020 membrane", "go_biological_process": "GO:0098609 cell-cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6PFT6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PG29-1", "uniprot_id": "SKAP2_DANRE", "mass": 39185.0, "length": 341, "protein_name": "Src kinase-associated phosphoprotein 2", "gene_name": "skap2", "organism": "Zebrafish", "refseq_name": "src kinase-associated phosphoprotein 2", "refseq_ac": "NP_956922", "gene_names_uniprotkb": "skap2; SKAP55; scap2; si:dz227h09.6; si:dz31b14.4; zgc:158223; zgc:65975", "gene_names_refseq": "SKAP55; scap2; si:dz227h09.6; si:dz31b14.4; skap2; zgc:158223; zgc:65975", "protein_names_uniprotkb": "Src kinase-associated phosphoprotein 2; Src family-associated phosphoprotein 2", "protein_names_refseq": "SKAP55 homolog; src family-associated phosphoprotein 2; src kinase-associated phosphoprotein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:368564)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC057253.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC057253.1., [RefSeq]; May be involved in B-cell and macrophage adhesion processes. May play a role in src signaling pathway., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0042113 B cell activation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PG29-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PGU2-1", "uniprot_id": "MAF1_DANRE", "mass": 27874.0, "length": 247, "protein_name": "Repressor of RNA polymerase III transcription MAF1 homolog", "gene_name": "maf1", "organism": "Zebrafish", "refseq_name": "repressor of RNA polymerase III transcription MAF1 homolog", "refseq_ac": "NP_998606", "gene_names_uniprotkb": "maf1; zgc:63803", "gene_names_refseq": "maf1a; maf1; wu:fb92h08; wu:fd61g02; zgc:63803", "protein_names_uniprotkb": "Repressor of RNA polymerase III transcription MAF1 homolog", "protein_names_refseq": "repressor of RNA polymerase III transcription MAF1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:406750)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "22333918", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056831.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056831.1., [RefSeq]; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA (By similarity)., [UniProtKB]; Multiple approaches support a central role for PP4 in Maf1 dephosphorylation., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0000994 RNA polymerase III core binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0016480 negative regulation of transcription by RNA polymerase III", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6PGU2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PGW3-1", "uniprot_id": "ARMD3_DANRE", "mass": 78779.0, "length": 689, "protein_name": "Armadillo-like helical domain-containing protein 3", "gene_name": "armh3", "organism": "Zebrafish", "refseq_name": "armadillo-like helical domain-containing protein 3", "refseq_ac": "NP_956913", "gene_names_uniprotkb": "armh3; zgc:63733", "gene_names_refseq": "CH73-173H19.1; armh3; zgc:63733", "protein_names_uniprotkb": "Armadillo-like helical domain-containing protein 3", "protein_names_refseq": "UPF0668 protein C10orf76 homolog; armadillo-like helical domain-containing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:393591)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056810.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056810.1. On Sep 30, 2011 this sequence version replaced NP_956913.1. Sequence Note: This RefSeq record was created from a transcript of different strain than the reference genome strain because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]; May be involved in Golgi maintenance and protein secretion., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005829 cytosol", "go_biological_process": "GO:1903358 regulation of Golgi organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PGW3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PH58-1", "uniprot_id": "TM39A_DANRE", "mass": 54156.0, "length": 481, "protein_name": "Transmembrane protein 39A", "gene_name": "tmem39a", "organism": "Zebrafish", "refseq_name": "transmembrane protein 39A", "refseq_ac": "NP_955926", "gene_names_uniprotkb": "tmem39a; fb92e03; wu:fb92e03; zgc:65781; zgc:77444", "gene_names_refseq": "fb92e03; tmem39a; wu:fb92e03; zgc:65781; zgc:77444", "protein_names_uniprotkb": "Transmembrane protein 39A", "protein_names_refseq": "transmembrane protein 39A", "tax_id": 7955, "disease": "", "pathway": " (dre:323208)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056707.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056707.1., [RefSeq]; Regulates autophagy by controlling the spatial distribution and levels of the intracellular phosphatidylinositol 4-phosphate (PtdIns(4)P) pools (By similarity). Modulates (PtdIns(4)P) levels by regulating the ER-to-Golgi trafficking of the phosphatidylinositide phosphatase SACM1L (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0016020 membrane", "go_biological_process": "GO:1901097 negative regulation of autophagosome maturation;GO:1902902 negative regulation of autophagosome assembly;GO:0070417 cellular response to cold;GO:0009409 response to cold;GO:0006914 autophagy", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PH58-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PH61-1", "uniprot_id": "S2534_DANRE", "mass": 34061.0, "length": 319, "protein_name": "Solute carrier family 25 member 34", "gene_name": "slc25a34", "organism": "Zebrafish", "refseq_name": "solute carrier family 25 member 34", "refseq_ac": "NP_956874", "gene_names_uniprotkb": "slc25a34; zgc:65857; zgc:77445", "gene_names_refseq": "slc25a34; zgc:65857; zgc:77445", "protein_names_uniprotkb": "Solute carrier family 25 member 34", "protein_names_refseq": "solute carrier family 25 member 34", "tax_id": 7955, "disease": "", "pathway": " (dre:393552)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056703.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056703.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PH61-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PHL4-1", "uniprot_id": "NKAI1_DANRE", "mass": 23610.0, "length": 207, "protein_name": "Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1", "gene_name": "nkain1", "organism": "Zebrafish", "refseq_name": "sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1", "refseq_ac": "NP_956839", "gene_names_uniprotkb": "nkain1; zgc:65908", "gene_names_refseq": "nkain1; zgc:65908", "protein_names_uniprotkb": "Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1; Na(+)/K(+)-transporting ATPase subunit beta-1-interacting protein 1", "protein_names_refseq": "Na(+)/K(+)-transporting ATPase subunit beta-1-interacting protein 1; Na+/K+ transporting ATPase interacting 1; sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:393517)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056509.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC056509.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0002028 regulation of sodium ion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6PHL4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PSS4-1", "uniprot_id": "Q6PSS4_DANRE", "mass": 14492.0, "length": 122, "protein_name": "GABA(A) receptor-associated protein a", "gene_name": "gabarapa", "organism": "Zebrafish", "refseq_name": "GABA(A) receptor-associated protein a", "refseq_ac": "NP_001013278", "gene_names_uniprotkb": "gabarapa; gabarap; mg:bb02b03", "gene_names_refseq": "gabarapa; gabarap; mg:bb02b03", "protein_names_uniprotkb": "GABA(A) receptor-associated protein a", "protein_names_refseq": "GABA(A) receptor associated protein; GABA(A) receptor-associated protein a", "tax_id": 7955, "disease": "syndromic intellectual disability (Disease Ontology:DOID:0050888)", "pathway": " (dre:326974); (R-DRE-1632852)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "16109975;16408288;19221467;20111057;22207143;36403304;36640352;37240050;37347427;38850536", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001034.1, GFIL01011091.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH548853.1, BC065894.1 and JBMGRA010000005.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; DLG4/PSD95 and GABARAP were analyzed using zebrafish embryos with morpholino knockdown system as a model organism., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N4E0", "ec_number_list": "", "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding;GO:0008429 phosphatidylethanolamine binding;GO:0050811 GABA receptor binding", "go_cellular_component": "GO:0000421 autophagosome membrane;GO:0005874 microtubule;GO:0012505 endomembrane system;GO:0031410 cytoplasmic vesicle", "go_biological_process": "GO:0097352 autophagosome maturation;GO:0000045 autophagosome assembly;GO:0007420 brain development;GO:0000423 mitophagy;GO:0006995 cellular response to nitrogen starvation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q6PSS4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6PUR6-1", "uniprot_id": "GPN2_DANRE", "mass": 35092.0, "length": 311, "protein_name": "GPN-loop GTPase 2", "gene_name": "gpn2", "organism": "Zebrafish", "refseq_name": "GPN-loop GTPase 2", "refseq_ac": "NP_999966", "gene_names_uniprotkb": "gpn2; atpbd1b; zgc:92877", "gene_names_refseq": "atpbd1b; gpn2; zgc:92877", "protein_names_uniprotkb": "GPN-loop GTPase 2; 3.6.5.-; ATP-binding domain 1 family member B", "protein_names_refseq": "ATP-binding domain 1 family member B; GPN-loop GTPase 2", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC083538.1, BC150450.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB797177.1, BC152270.1 and BC083538.1. On Jun 19, 2015 this sequence version replaced NP_999966.1., [RefSeq]; Small GTPase involved in the correct assembly of RNA polymerase RNA polymerase II and III (RNAPII and RNAPIII) complexes, ensuring their proper nuclear import., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5XIY1", "ec_number_list": "3.6.5.2;3.6.5.3;3.6.5.5;3.6.1.5;3.6.5.-;3.6.1.-;3.6.5.4", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6PUR6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6Q7X9-1", "uniprot_id": "KLH31_DANRE", "mass": 70806.0, "length": 635, "protein_name": "Kelch-like protein 31", "gene_name": "klhl31", "organism": "Zebrafish", "refseq_name": "kelch-like protein 31", "refseq_ac": "NP_001003727", "gene_names_uniprotkb": "klhl31; kbtbd1; klhl", "gene_names_refseq": "kbtbd1; klhl31; klhl; wu:fa31h10; wu:fb95e08", "protein_names_uniprotkb": "Kelch-like protein 31; Kelch repeat and BTB domain-containing protein 1; Kelch-like protein Klhl", "protein_names_refseq": "kelch repeat and BTB (POZ) domain containing 1; kelch repeat and BTB domain-containing protein 1; kelch-like 31; kelch-like protein 31; kelch-like protein Klhl; kelchlike", "tax_id": 7955, "disease": "centronuclear myopathy (Disease Ontology:DOID:14717)", "pathway": " (dre:407079)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15302408", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC131859.1, SRR32588734.492191.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On Apr 18, 2018 this sequence version replaced XP_005156548.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; The expression pattern of klhl, as well as the presence of the kelch repeats indicates a possible role for Klhl in the organization of striated muscle cytoarchitecture., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0046329 negative regulation of JNK cascade", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6Q7X9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6QB00-1", "uniprot_id": "HELT_DANRE", "mass": 30861.0, "length": 270, "protein_name": "Hairy and enhancer of split-related protein helt", "gene_name": "helt", "organism": "Zebrafish", "refseq_name": "hairy and enhancer of split-related protein helt", "refseq_ac": "NP_996948", "gene_names_uniprotkb": "helt; zgc:109704", "gene_names_refseq": "helt; zgc:109704", "protein_names_uniprotkb": "Hairy and enhancer of split-related protein helt; HES/HEY-like transcription factor", "protein_names_refseq": "HES/HEY-like transcription factor; HESL; Her/Hey-like protein; Hey4; hairy and enhancer of split-related protein helt; hey-like transcription factor", "tax_id": 7955, "disease": "", "pathway": " (dre:404275)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092667.1, EH590501.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092667.1., [RefSeq]; Transcriptional repressor which binds preferentially to the canonical E box sequence 5'-CACGCG-3'., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q568X6", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0007219 Notch signaling pathway;GO:0009952 anterior/posterior pattern specification;GO:0050767 regulation of neurogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q6QB00-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6T9C3-1", "uniprot_id": "Q6T9C3_DANRE", "mass": 169038.0, "length": 1540, "protein_name": "Regulator of G-protein signaling 12b", "gene_name": "rgs12b", "organism": "Zebrafish", "refseq_name": "regulator of G-protein signaling 12b", "refseq_ac": "NP_999889", "gene_names_uniprotkb": "rgs12b; RGS12TS-I; RGS12TS-L; RGS12TS-S; RGS12TS; cb958; rgs12", "gene_names_refseq": "RGS12TS-I; RGS12TS-L; RGS12TS-S; RGS12TS; cb958; rgs12b; rgs12", "protein_names_uniprotkb": "Regulator of G-protein signaling 12b", "protein_names_refseq": "regulator of G-protein signaling 12b; regulator of G-protein signalling 12", "tax_id": 7955, "disease": "", "pathway": " (dre:378970); (R-DRE-418594)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6T9C4", "ec_number_list": "", "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0008277 regulation of G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6T9C3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6TEQ0-1", "uniprot_id": "EEPD1_DANRE", "mass": 60083.0, "length": 550, "protein_name": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "gene_name": "eepd1", "organism": "Zebrafish", "refseq_name": "endonuclease/exonuclease/phosphatase family domain-containing protein 1", "refseq_ac": "NP_991322", "gene_names_uniprotkb": "eepd1; zgc:77395", "gene_names_refseq": "eepd1; zgc:77395", "protein_names_uniprotkb": "Endonuclease/exonuclease/phosphatase family domain-containing protein 1", "protein_names_refseq": "KIAA1706-like protein; endonuclease/exonuclease/phosphatase family domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:402965)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15520368;26900729", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY422999.1, BC065655.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY422999.1., [RefSeq]; The results demonstrate that EEPD1 maintains genome stability during embryonic replication stress., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6P0E2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006281 DNA repair", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6TEQ0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6TGW5-1", "uniprot_id": "OSTF1_DANRE", "mass": 23837.0, "length": 214, "protein_name": "Osteoclast-stimulating factor 1", "gene_name": "ostf1", "organism": "Zebrafish", "refseq_name": "osteoclast-stimulating factor 1", "refseq_ac": "NP_998022", "gene_names_uniprotkb": "ostf1", "gene_names_refseq": "ostf1; sb:eu842; zgc:86718", "protein_names_uniprotkb": "Osteoclast-stimulating factor 1", "protein_names_refseq": "osteoclast-stimulating factor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:405783); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "15520368;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY398391.1, SRR26395028.914616.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Aug 31, 2013 this sequence version replaced XP_005165079.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Induces bone resorption, acting probably through a signaling cascade which results in the secretion of factor(s) enhancing osteoclast formation and activity., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6TGW5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6TGZ4-1", "uniprot_id": "THA11_DANRE", "mass": 28728.0, "length": 257, "protein_name": "THAP domain-containing protein 11", "gene_name": "thap11", "organism": "Zebrafish", "refseq_name": "THAP domain-containing protein 11", "refseq_ac": "NP_998267", "gene_names_uniprotkb": "thap11; zgc:65871", "gene_names_refseq": "thap11; wu:fa14e04; wu:fc33b05; zgc:65871; zgc:76876", "protein_names_uniprotkb": "THAP domain-containing protein 11", "protein_names_refseq": "THAP domain-containing protein 11", "tax_id": 7955, "disease": "methylmalonic aciduria and homocystinuria type cblC (Disease Ontology:DOID:0050715)", "pathway": " (dre:406390)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15520368;28449119", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066471.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC066471.1., [RefSeq]; Transcription factor, which has both transcriptional activation and repression activities. Binds numerous promoters of genes and therefore can be involved in many processes (By similarity). Also modulates chromatin accessibility (By similarity). Required for normal brain development and neural precursor differentiation (PubMed:28449119)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6NYT2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6TGZ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6TLH3-1", "uniprot_id": "CUED2_DANRE", "mass": 31712.0, "length": 282, "protein_name": "CUE domain-containing protein 2", "gene_name": "cuedc2", "organism": "Zebrafish", "refseq_name": "CUE domain-containing protein 2", "refseq_ac": "NP_001017994", "gene_names_uniprotkb": "cuedc2; zgc:92255", "gene_names_refseq": "cuedc2; wu:fi42e02; zgc:92255", "protein_names_uniprotkb": "CUE domain-containing protein 2", "protein_names_refseq": "CUE domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:334351)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081633.1, CN024457.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081633.1., [RefSeq]; May play a role in targeting proteins for ubiquitination and subsequent proteasomal degradation., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6TLH3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6TNR1-1", "uniprot_id": "RHPN2_DANRE", "mass": 77057.0, "length": 683, "protein_name": "Rhophilin-2", "gene_name": "rhpn2", "organism": "Zebrafish", "refseq_name": "rhophilin-2", "refseq_ac": "NP_957472", "gene_names_uniprotkb": "rhpn2; cb668; sb:cb668; wu:fa26b12; wu:fk87d04; zgc:55960", "gene_names_refseq": "cb668; rhpn2; sb:cb668; wu:fa26b12; wu:fk87d04; zgc:55960", "protein_names_uniprotkb": "Rhophilin-2; GTP-Rho-binding protein 2", "protein_names_refseq": "GTP-Rho-binding protein 2; rhophilin-2", "tax_id": 7955, "disease": "", "pathway": " (dre:321330); (R-DRE-5666185); (R-DRE-8980692); (R-DRE-9013026)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044556.1, AY391456.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044556.1., [RefSeq]; Binds specifically to GTP-Rho., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q803B1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0051497 negative regulation of stress fiber assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6TNR1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6TNS2-1", "uniprot_id": "PK1IP_DANRE", "mass": 40901.0, "length": 368, "protein_name": "p21-activated protein kinase-interacting protein 1-like", "gene_name": "pak1ip1", "organism": "Zebrafish", "refseq_name": "p21-activated protein kinase-interacting protein 1-like", "refseq_ac": "NP_957239", "gene_names_uniprotkb": "pak1ip1; Gdpd1; fb11d05; wu:fb11d05; zgc:56683", "gene_names_refseq": "Gdpd1; fb11d05; pak1ip1; wu:fb11d05; zgc:56683", "protein_names_uniprotkb": "p21-activated protein kinase-interacting protein 1-like; PAK1-interacting protein 1-like", "protein_names_refseq": "glycerophosphodiester phosphodiesterase domain containing 1; p21-activated protein kinase-interacting protein 1-like", "tax_id": 7955, "disease": "", "pathway": " (dre:336470)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY391445.1, BC066416.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY391445.1. On Dec 22, 2004 this sequence version replaced NP_957239.1., [RefSeq]; Negatively regulates the PAK1 kinase. PAK1 is a member of the PAK kinase family, which has been shown to play a positive role in the regulation of signaling pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42. May be involved in ribosomal large subunit assembly., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6NYY5;Q7ZW90", "ec_number_list": "", "go_molecular_function": "GO:0004860 protein kinase inhibitor activity", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0042273 ribosomal large subunit biogenesis;GO:0009968 negative regulation of signal transduction;GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0042254 ribosome biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6TNS2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6TNT2-1", "uniprot_id": "ANR46_DANRE", "mass": 25121.0, "length": 228, "protein_name": "Ankyrin repeat domain-containing protein 46", "gene_name": "ankrd46", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "ankrd46; zgc:109722", "gene_names_refseq": "", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein 46", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q504K9", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6TNT2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6VEU3-1", "uniprot_id": "PNO1_DANRE", "mass": 27884.0, "length": 252, "protein_name": "RNA-binding protein PNO1", "gene_name": "pno1", "organism": "Zebrafish", "refseq_name": "RNA-binding protein PNO1", "refseq_ac": "NP_956842", "gene_names_uniprotkb": "pno1; zgc:65782", "gene_names_refseq": "pno1; zgc:65782; zgc:77265", "protein_names_uniprotkb": "RNA-binding protein PNO1", "protein_names_refseq": "RNA-binding protein PNO1", "tax_id": 7955, "disease": "", "pathway": " (dre:393520); (R-DRE-6791226)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "15497447", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC056522.1, BC065596.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476788 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC056522.1. On Sep 27, 2011 this sequence version replaced NP_956842.1., [RefSeq]; Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome. Positively regulates dimethylation of two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6P0J4;Q6PHK2", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0032040 small-subunit processome", "go_biological_process": "GO:0042274 ribosomal small subunit biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6VEU3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6XCC5-1", "uniprot_id": "Q6XCC5_DANRE", "mass": 41943.0, "length": 371, "protein_name": "Probable G-protein coupled receptor 34", "gene_name": "gpr34l", "organism": "Zebrafish", "refseq_name": "G protein-coupled receptor 34 like", "refseq_ac": "NP_001007218", "gene_names_uniprotkb": "gpr34l", "gene_names_refseq": "gpr34l", "protein_names_uniprotkb": "Probable G-protein coupled receptor 34", "protein_names_refseq": "G protein-coupled receptor 34 like", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "12835326;29270984", "class_list": "", "function": "G-protein-coupled receptor of lysophosphatidylserine (LysoPS) that plays different roles in immune response. Acts a damage-sensing receptor that triggers tissue repair upon recognition of dying neutrophils. Mechanistically, apoptotic neutrophils release lysophosphatydilserine that are recognized by type 3 innate lymphoid cells (ILC3s) via GPR34, which activates downstream PI3K-AKT and RAS-ERK signaling pathways leading to STAT3 activation and IL-22 production. Plays an important role in microglial function, controlling morphology and phagocytosis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]; PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY241106.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008142 oxysterol binding;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6XCC5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6XCC7-1", "uniprot_id": "Q6XCC7_DANRE", "mass": 44047.0, "length": 389, "protein_name": "Probable G-protein coupled receptor 34", "gene_name": "gpr34a", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 34a", "refseq_ac": "NP_001007216", "gene_names_uniprotkb": "gpr34a; fl10e05; wu:fl10e05", "gene_names_refseq": "fl10e05; gpr34a; wu:fl10e05", "protein_names_uniprotkb": "Probable G-protein coupled receptor 34", "protein_names_refseq": "probable G-protein coupled receptor 34a", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 3, "publication_id_list": "12835326;16109975;36122226", "class_list": "", "function": "G-protein-coupled receptor of lysophosphatidylserine (LysoPS) that plays different roles in immune response. Acts a damage-sensing receptor that triggers tissue repair upon recognition of dying neutrophils. Mechanistically, apoptotic neutrophils release lysophosphatydilserine that are recognized by type 3 innate lymphoid cells (ILC3s) via GPR34, which activates downstream PI3K-AKT and RAS-ERK signaling pathways leading to STAT3 activation and IL-22 production. Plays an important role in microglial function, controlling morphology and phagocytosis., [UniProtKB, UniProtKB, UniProtKB]; PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY241104.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0045028 G protein-coupled purinergic nucleotide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6XCC7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM12-1", "uniprot_id": "Q6ZM12_DANRE", "mass": 16295.0, "length": 147, "protein_name": "Hemoglobin, beta adult 2", "gene_name": "hbba2", "organism": "Zebrafish", "refseq_name": "hemoglobin, beta adult 2", "refseq_ac": "NP_001003431", "gene_names_uniprotkb": "hbba2; fj42e02; si:ch211-5k11.13; si:xx-by187g17.6; wu:fj42e02; zgc:113872; zgc:92880", "gene_names_refseq": "fj42e02; hbba2; si:ch211-5k11.13; si:xx-by187g17.6; wu:fj42e02; zgc:113872; zgc:92880", "protein_names_uniprotkb": "Hemoglobin, beta adult 2", "protein_names_refseq": "hemoglobin, beta adult 2", "tax_id": 7955, "disease": "autosomal dominant beta thalassemia (Disease Ontology:DOID:0080770); delta beta-thalassemia (Disease Ontology:DOID:0080773); sickle cell disease (Disease Ontology:DOID:0081445); Heinz body anemia (Disease Ontology:DOID:0111363); familial erythrocytosis 6 (Disease Ontology:DOID:0111632); sickle cell anemia (Disease Ontology:DOID:10923); alpha thalassemia (Disease Ontology:DOID:1099); beta thalassemia (Disease Ontology:DOID:12241); malaria (Disease Ontology:DOID:12365); Parkinson's disease (Disease Ontology:DOID:14330); acute chest syndrome (Disease Ontology:DOID:1584); anemia (Disease Ontology:DOID:2355); hemoglobin C disease (Disease Ontology:DOID:2859); hemoglobinopathy (Disease Ontology:DOID:2860); congenital hemolytic anemia (Disease Ontology:DOID:589); polycythemia (Disease Ontology:DOID:8432)", "pathway": " (dre:445037); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "18728227;20528263;22537494;23413775;28138518;28252024;28333290;29458080;33321129;38040044", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH513862.1, EH516505.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708829, SAMEA708835 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On or before Aug 18, 2018 this sequence version replaced XP_005164394.1, NP_001003431.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 16, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BBK3", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0019825 oxygen binding;GO:0005344 oxygen carrier activity", "go_cellular_component": "GO:0005833 hemoglobin complex;GO:0031838 haptoglobin-hemoglobin complex", "go_biological_process": "GO:0048821 erythrocyte development;GO:0015671 oxygen transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q6ZM12-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM23-1", "uniprot_id": "Q6ZM23_DANRE", "mass": 8480.0, "length": 76, "protein_name": "Cytochrome c oxidase subunit 6C", "gene_name": "cox6c", "organism": "Zebrafish", "refseq_name": "cytochrome c oxidase subunit 6C", "refseq_ac": "NP_001191053", "gene_names_uniprotkb": "cox6c; si:ch211-239j9.2", "gene_names_refseq": "cox6c; si:ch211-239j9.2", "protein_names_uniprotkb": "Cytochrome c oxidase subunit 6C; Cytochrome c oxidase polypeptide VIc", "protein_names_refseq": "cytochrome c oxidase subunit 6C; cytochrome c oxidase subunit VIc", "tax_id": 7955, "disease": "", "pathway": " (dre:494577)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "20233836;21562175;26469318;28138518;28252024;31787979;32931839;35993337;36794678", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH452879.1, BC124651.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH564247.1 and EH452879.1. On Feb 18, 2011 this sequence version replaced XP_001923649.1., [RefSeq]; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2M7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0045277 respiratory chain complex IV", "go_biological_process": "GO:0006123 mitochondrial electron transport, cytochrome c to oxygen;GO:1902600 proton transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6ZM23-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM24-1", "uniprot_id": "Q6ZM24_DANRE", "mass": 34290.0, "length": 305, "protein_name": "Mitochondrial import receptor subunit TOM34", "gene_name": "tomm34", "organism": "Zebrafish", "refseq_name": "mitochondrial import receptor subunit TOM34", "refseq_ac": "NP_955932", "gene_names_uniprotkb": "tomm34; wu:fb96b08; zC239J9.1; zgc:56645", "gene_names_refseq": "tomm34; wu:fb96b08; zC239J9.1; zgc:56645", "protein_names_uniprotkb": "Mitochondrial import receptor subunit TOM34", "protein_names_refseq": "mitochondrial import receptor subunit TOM34", "tax_id": 7955, "disease": "", "pathway": " (dre:323361)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27086301;28252024;32931839", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049337.1, GDQQ01003953.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB848928.1, EH519797.1 and JBMGRA010000006.1. On Feb 15, 2011 this sequence version replaced NP_955932.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9V8", "ec_number_list": "", "go_molecular_function": "GO:0031072 heat shock protein binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0006626 protein targeting to mitochondrion", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6ZM24-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM25-1", "uniprot_id": "Q6ZM25_DANRE", "mass": 79379.0, "length": 703, "protein_name": "3.4.11.9; Xaa-Pro aminopeptidase 2", "gene_name": "xpnpep2", "organism": "Zebrafish", "refseq_name": "xaa-Pro aminopeptidase 2 precursor", "refseq_ac": "NP_957326", "gene_names_uniprotkb": "xpnpep2; zK61O11.1; zgc:63528", "gene_names_refseq": "xpnpep2; zK61O11.1; zgc:63528", "protein_names_uniprotkb": "3.4.11.9; Xaa-Pro aminopeptidase 2", "protein_names_refseq": "xaa-Pro aminopeptidase 2 precursor", "tax_id": 7955, "disease": "acquired angioedema (Disease Ontology:DOID:0080941)", "pathway": " (dre:394007)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27526058", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054906.1, GFIL01043842.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Jun 11, 2025 this sequence version replaced NP_957326.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1Z3N5", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0070006 metalloaminopeptidase activity;GO:0004177 aminopeptidase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6ZM25-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM39-1", "uniprot_id": "Q6ZM39_DANRE", "mass": 29987.0, "length": 269, "protein_name": "Transcription factor LBX1a", "gene_name": "lbx1a", "organism": "Zebrafish", "refseq_name": "transcription factor LBX1a", "refseq_ac": "NP_001020703", "gene_names_uniprotkb": "lbx1a; dZ265N4.1; lbx1b; si:busm1-265n4.1; si:ch211-103o12.1", "gene_names_refseq": "dZ265N4.1; lbx1a; lbx1b; si:busm1-265n4.1; si:ch211-103o12.1", "protein_names_uniprotkb": "Transcription factor LBX1a", "protein_names_refseq": "ladybird homeobox 1b; transcription factor LBX1a", "tax_id": 7955, "disease": "congenital central hypoventilation syndrome (Disease Ontology:DOID:0060731)", "pathway": "", "pathway_count": 0, "publication_count": 10, "publication_id_list": "18541024;19216761;19562753;20091319;20112453;31023879;34411410;34435397;36533556;38017520", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4476742, SAMEA4476752 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL928816.2. On Jul 16, 2005 this sequence version replaced XP_692551.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N6Y5;A0AC58H1E8;A0AC58H1E9;A0AC58H1F1;A0AC58H1F2;A0AC58H1F7;A0AC58H1G9", "ec_number_list": "", "go_molecular_function": "GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:1990837 sequence-specific double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0042692 muscle cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q6ZM39-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM41-1", "uniprot_id": "Q6ZM41_DANRE", "mass": 11944.0, "length": 107, "protein_name": "Succinate dehydrogenase assembly factor 4, mitochondrial", "gene_name": "sdhaf4", "organism": "Zebrafish", "refseq_name": "succinate dehydrogenase assembly factor 4, mitochondrial", "refseq_ac": "NP_001025355", "gene_names_uniprotkb": "sdhaf4; dZ265N4.4; si:busm1-265n4.4; si:busm1-46p4.2; si:ch211-103o12.3", "gene_names_refseq": "dZ265N4.4; sdhaf4; si:busm1-265n4.4; si:busm1-46p4.2; si:ch211-103o12.3", "protein_names_uniprotkb": "Succinate dehydrogenase assembly factor 4, mitochondrial", "protein_names_refseq": "succinate dehydrogenase assembly factor 4, mitochondrial", "tax_id": 7955, "disease": "dilated cardiomyopathy (Disease Ontology:DOID:12930); candidiasis (Disease Ontology:DOID:1508)", "pathway": " (dre:563956); (R-DRE-9854311)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "12234666;26469318", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0034553 mitochondrial respiratory chain complex II assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q6ZM41-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM63-1", "uniprot_id": "GPN3_DANRE", "mass": 32626.0, "length": 285, "protein_name": "GPN-loop GTPase 3", "gene_name": "gpn3", "organism": "Zebrafish", "refseq_name": "GPN-loop GTPase 3", "refseq_ac": "NP_001007371", "gene_names_uniprotkb": "gpn3; atpbd1c; si:dkey-83d9.3", "gene_names_refseq": "atpbd1c; gpn3; si:dkey-83d9.3; zgc:101903", "protein_names_uniprotkb": "GPN-loop GTPase 3; 3.6.5.-; ATP-binding domain 1 family member C", "protein_names_refseq": "ATP-binding domain 1 family member C; GPN-loop GTPase 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100000326)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC085469.1, BC152613.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085469.1. On Jan 29, 2008 this sequence version replaced XP_001335642.1., [RefSeq]; Small GTPase involved in the correct assembly of RNA polymerase II (RNAPII) complex, ensuring proper nuclear import of RNAPII., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5U3M6", "ec_number_list": "3.6.5.2;3.6.5.3;3.6.5.5;3.6.1.5;3.6.5.-;3.6.1.-;3.6.5.4", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q6ZM63-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q6ZM83-1", "uniprot_id": "Q6ZM83_DANRE", "mass": 58682.0, "length": 518, "protein_name": "PiggyBac transposable element-derived protein 5", "gene_name": "pgbd5", "organism": "Zebrafish", "refseq_name": "piggyBac transposable element-derived protein 5", "refseq_ac": "NP_001139077", "gene_names_uniprotkb": "pgbd5; si:ch211-8a9.3; zC8A9.3", "gene_names_refseq": "pgbd5; si:ch211-8a9.3; zC8A9.3", "protein_names_uniprotkb": "PiggyBac transposable element-derived protein 5", "protein_names_refseq": "piggyBac transposable element-derived protein 5", "tax_id": 7955, "disease": "", "pathway": " (dre:570182)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "24683187;27189481;29420541;31560986;33757938", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01032030.1, GFIL01030064.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505390 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_698721.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRL7", "ec_number_list": "", "go_molecular_function": "GO:0004803 transposase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0098038 non-replicative DNA transposition", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6ZM83-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SX95-1", "uniprot_id": "MAD3_DANRE", "mass": 23019.0, "length": 200, "protein_name": "Max dimerization protein 3", "gene_name": "mxd3", "organism": "Zebrafish", "refseq_name": "max dimerization protein 3", "refseq_ac": "NP_957350", "gene_names_uniprotkb": "mxd3; Mad; mad3; zgc:66281", "gene_names_refseq": "Mad; mxd3; zgc:66281", "protein_names_uniprotkb": "Max dimerization protein 3; Max dimerizer 3; Max-associated protein 3; Max-interacting transcriptional repressor MAD3", "protein_names_refseq": "Mad3; max dimerization protein 3; max dimerizer 3; max-associated protein 3; max-interacting transcriptional repressor MAD3", "tax_id": 7955, "disease": "Parkinson's disease (Disease Ontology:DOID:14330)", "pathway": " (dre:394031)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "34943942", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055579.1, EH545134.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505381, SAMEA4476728 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055579.1., [RefSeq]; MXD3 Promotes Obesity and the Androgen Receptor Signaling Pathway in Gender-Disparity Hepatocarcinogenesis. Publication Status: Online-Only, [RefSeq, PubMed]; Transcriptional repressor. Binds with MAX to form a sequence-specific DNA-binding protein complex which recognizes the core sequence 5'-CAC[GA]TG-3' (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7SX95-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SXF2-1", "uniprot_id": "UBL5_DANRE", "mass": 8587.0, "length": 73, "protein_name": "Ubiquitin-like protein 5", "gene_name": "ubl5; zgc:66388", "organism": "Zebrafish", "refseq_name": "ubiquitin-like protein 5", "refseq_ac": "NP_957435", "gene_names_uniprotkb": "ubl5; zgc:66388; UBL5; zgc:66388", "gene_names_refseq": "ubl5; zgc:66388", "protein_names_uniprotkb": "Ubiquitin-like protein 5", "protein_names_refseq": "ubiquitin-like 5; ubiquitin-like protein 5", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055630.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476736, SAMEA4476740 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055630.1., [RefSeq]; Ubiquitin-like protein that plays a role in cell proliferation and sister chromatid cohesion by associating with spliceosomal proteins. Participates thereby in pre-mRNA splicing by maintaining spliceosome integrity. Promotes the functional integrity of the Fanconi anemia DNA repair pathway by interacting with FANCI component and subsequently mediating the formation of FANCI homodimers. Also plays a protective role against ER stress-induced apoptosis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0031386 protein tag activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7SXF2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SXZ1-1", "uniprot_id": "PIGB_DANRE", "mass": 62240.0, "length": 536, "protein_name": "GPI alpha-1,2-mannosyltransferase 3", "gene_name": "pigb", "organism": "Zebrafish", "refseq_name": "GPI alpha-1,2-mannosyltransferase 3", "refseq_ac": "NP_956770", "gene_names_uniprotkb": "pigb; zgc:63658", "gene_names_refseq": "pigb; zgc:63658", "protein_names_uniprotkb": "GPI alpha-1,2-mannosyltransferase 3; 2.4.1.-; GPI mannosyltransferase III; GPI-MT-III; PIG-B; Phosphatidylinositol-glycan biosynthesis class B protein", "protein_names_refseq": "GPI alpha-1,2-mannosyltransferase 3; GPI mannosyltransferase 3; GPI mannosyltransferase III; GPI-MT-III; PIG-B; phosphatidylinositol-glycan biosynthesis class B protein", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 80 (Disease Ontology:DOID:0112216); sleeping sickness (Disease Ontology:DOID:10112)", "pathway": " (dre:393448); (R-DRE-162710)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055191.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055191.1., [RefSeq]; Alpha-1,2-mannosyltransferase that catalyzes the transfer of the third mannose, via an alpha-1,2 bond, from a dolichol-phosphate-mannose (Dol-P-Man) to a 2-acyl-6-[alpha-D-mannosyl-(1->6)-2-phosphoethanolamine-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl]-1-(1-radyl,2-acyl-sn-glycero-3-phospho)-1D-myo-inositol intermediate to generate a 2-acyl-6-[alpha-D-mannosyl-(1->2)-alpha-D-mannosyl-(1->6)-2-phosphoethanolamine-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl]-1-(1-radyl,2-acyl-sn-glycero-3-phospho)-1D-myo-inositol (also termed H6) and participates in the nineth step of the glycosylphosphatidylinositol-anchor biosynthesis (By similarity). May also add the third mannose to a 2-acyl-6-[alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl]-1-(1-radyl,2-acyl-sn-glycero-3-phospho)-1D-myo-inositol (also termed H3) intermediate generating a 2-acyl-6-(alpha-D-mannosyl-(1->2)-alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl)-1-(1-radyl,2-acyl-sn-glycero-3-phospho)-1D-myo-inositol (also termed H4) (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.4.1.-", "go_molecular_function": "GO:0000026 alpha-1,2-mannosyltransferase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006506 GPI anchor biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7SXZ1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SY07-1", "uniprot_id": "EIF1A_DANRE", "mass": 19794.0, "length": 172, "protein_name": "Probable RNA-binding protein EIF1AD", "gene_name": "eif1ad", "organism": "Zebrafish", "refseq_name": "probable RNA-binding protein EIF1AD", "refseq_ac": "NP_956762", "gene_names_uniprotkb": "eif1ad; zgc:63631", "gene_names_refseq": "eif1ad; zgc:63631", "protein_names_uniprotkb": "Probable RNA-binding protein EIF1AD; Eukaryotic translation initiation factor 1A domain-containing protein", "protein_names_refseq": "eukaryotic translation initiation factor 1A domain-containing protein; probable RNA-binding protein EIF1AD", "tax_id": 7955, "disease": "", "pathway": " (dre:393440)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055173.1, CN016080.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC055173.1., [RefSeq]; May play a role into cellular response to oxidative stress. May decrease cell proliferation (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding;GO:0003743 translation initiation factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7SY07-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SYJ9-1", "uniprot_id": "SPAG7_DANRE", "mass": 26263.0, "length": 230, "protein_name": "Sperm-associated antigen 7 homolog", "gene_name": "spag7", "organism": "Zebrafish", "refseq_name": "sperm-associated antigen 7 homolog", "refseq_ac": "NP_957419", "gene_names_uniprotkb": "spag7; zgc:66397", "gene_names_refseq": "spag7; zgc:66397", "protein_names_uniprotkb": "Sperm-associated antigen 7 homolog", "protein_names_refseq": "sperm-associated antigen 7 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:394100)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "18307296", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054697.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476808 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054697.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7SYJ9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SYK0-1", "uniprot_id": "CHID1_DANRE", "mass": 44166.0, "length": 391, "protein_name": "Chitinase domain-containing protein 1", "gene_name": "chid1", "organism": "Zebrafish", "refseq_name": "chitinase domain-containing protein 1 precursor", "refseq_ac": "NP_956351", "gene_names_uniprotkb": "chid1; fb02e07; wu:fb02e07; zgc:66396", "gene_names_refseq": "chid1; fb02e07; wu:fb02e07; zgc:66396", "protein_names_uniprotkb": "Chitinase domain-containing protein 1", "protein_names_refseq": "chitinase domain-containing protein 1 precursor; chitinase domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:337225); (R-DRE-114608)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054696.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054696.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0070492 oligosaccharide binding;GO:0008061 chitin binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005764 lysosome;GO:0012505 endomembrane system", "go_biological_process": "GO:0005975 carbohydrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7SYK0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SZE8-1", "uniprot_id": "TP8L1_DANRE", "mass": 21590.0, "length": 186, "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 1", "gene_name": "tnfaip8l1", "organism": "Zebrafish", "refseq_name": "tumor necrosis factor alpha-induced protein 8-like protein 1", "refseq_ac": "NP_956626", "gene_names_uniprotkb": "tnfaip8l1; si:dkey-49m19.6; tnfaip8; zgc:55331", "gene_names_refseq": "TIPE1; si:dkey-49m19.6; tnfaip8l1; tnfaip8; zgc:55331", "protein_names_uniprotkb": "Tumor necrosis factor alpha-induced protein 8-like protein 1; TIPE1; TNF alpha-induced protein 8-like protein 1; TNFAIP8-like protein 1", "protein_names_refseq": "TNF alpha-induced protein 8-like protein 1; TNFAIP8-like protein 1; tumor necrosis factor alpha-induced protein 8-like protein 1; tumor necrosis factor, alpha-induced protein 8-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:393303); (R-DRE-1483255)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "23594743;36898854", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01013891.1, GDQQ01004765.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476743 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On or before Aug 31, 2013 this sequence version replaced XP_005161649.1, XP_696274.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Structural insight into TIPE1 functioning as a lipid transfer protein., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0032007 negative regulation of TOR signaling;GO:0042981 regulation of apoptotic process;GO:1902531 regulation of intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q7SZE8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SZP2-1", "uniprot_id": "CA052_DANRE", "mass": 24282.0, "length": 214, "protein_name": "UPF0690 protein C1orf52 homolog", "gene_name": "zgc:65873", "organism": "Zebrafish", "refseq_name": "UPF0690 protein C1orf52 homolog", "refseq_ac": "NP_956836", "gene_names_uniprotkb": "zgc:65873", "gene_names_refseq": "zgc:65873; zgc:77373", "protein_names_uniprotkb": "UPF0690 protein C1orf52 homolog", "protein_names_refseq": "UPF0690 protein C1orf52 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:393514)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "18307296", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066398.1, DT875255.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA4476739 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Apr 13, 2018 this sequence version replaced XP_021325440.1. Sequence Note:., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7SZP2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7SZX5-1", "uniprot_id": "Q7SZX5_DANRE", "mass": 74538.0, "length": 673, "protein_name": "Methyl-CpG-binding domain protein 1b", "gene_name": "mbd1b", "organism": "Zebrafish", "refseq_name": "methyl-CpG-binding domain protein 1b isoform 2", "refseq_ac": "NP_001038218", "gene_names_uniprotkb": "mbd1b; mbd1; wu:fi45g12; zK13A21.11; zK13A21.17", "gene_names_refseq": "mbd1b; mbd1; wu:fi45g12; zK13A21.11; zK13A21.17", "protein_names_uniprotkb": "Methyl-CpG-binding domain protein 1b", "protein_names_refseq": "methyl-CpG binding domain protein 1; methyl-CpG-binding domain protein 1b isoform 2", "tax_id": 7955, "disease": "lung cancer (Disease Ontology:DOID:1324); transient cerebral ischemia (Disease Ontology:DOID:224)", "pathway": " (dre:334386); (R-DRE-3899300)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "12711219;24240475;27189481;28068562", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588726.44484701.1, SRR32588718.5242642.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898400, SAMEA898401 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Jun 17, 2025 this sequence version replaced NP_001038218.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0008327 methyl-CpG binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0006346 DNA methylation-dependent constitutive heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q7SZX5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T172-1", "uniprot_id": "Q7T172_DANRE", "mass": 30576.0, "length": 268, "protein_name": "arylamine N-acetyltransferase", "gene_name": "si:rp71-1f1.4", "organism": "Zebrafish", "refseq_name": "arylamine N-acetyltransferase", "refseq_ac": "NP_001025392", "gene_names_uniprotkb": "si:rp71-1f1.4; bZ1F1.4", "gene_names_refseq": "bZ1F1.4; si:rp71-1f1.4", "protein_names_uniprotkb": "arylamine N-acetyltransferase; 2.3.1.5", "protein_names_refseq": "arylamine N-acetyltransferase 2; arylamine N-acetyltransferase", "tax_id": 7955, "disease": "", "pathway": " (dre:567991)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: SRR26395013.285327.1, SRR26395062.895514.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000024.1. On Aug 6, 2005 this sequence version replaced XP_696394.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7K6", "ec_number_list": "", "go_molecular_function": "GO:0004060 arylamine N-acetyltransferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7T172-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T2A3-1", "uniprot_id": "DDA1_DANRE", "mass": 11982.0, "length": 104, "protein_name": "DET1- and DDB1-associated protein 1", "gene_name": "dda1", "organism": "Zebrafish", "refseq_name": "DET1- and DDB1-associated protein 1", "refseq_ac": "NP_998292", "gene_names_uniprotkb": "dda1; zgc:64154", "gene_names_refseq": "dda1; wu:fa11a03; wu:fb73f11; zgc:64154", "protein_names_uniprotkb": "DET1- and DDB1-associated protein 1", "protein_names_refseq": "DET1- and DDB1-associated protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:796589); (R-DRE-8951664)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054628.1, BC155199.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476756, SAMEA4476796 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054628.1. On Feb 22, 2008 this sequence version replaced XP_001334434.1., [RefSeq]; Functions as a component of numerous distinct DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. In the DCX complexes, acts as a scaffolding subunit required to stabilize the complex., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0000209 protein polyubiquitination;GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T2A3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T2F4-1", "uniprot_id": "Q7T2F4_DANRE", "mass": 40533.0, "length": 363, "protein_name": "Signal-transducing adaptor protein 2a", "gene_name": "stap2a", "organism": "Zebrafish", "refseq_name": "signal-transducing adaptor protein 2a", "refseq_ac": "NP_942103", "gene_names_uniprotkb": "stap2a; cb901; stap2; wu:fd15d07; zgc:63913", "gene_names_refseq": "cb901; stap2a; stap2; wu:fd15d07; zgc:63913", "protein_names_uniprotkb": "Signal-transducing adaptor protein 2a", "protein_names_refseq": "signal-transducing adaptor protein 2a; signal-transducing adaptor protein-2", "tax_id": 7955, "disease": "", "pathway": " (dre:327172); (R-DRE-8849474)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "16109975;26469318;37342918", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054569.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054569.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6NR58;Q1MT70", "ec_number_list": "", "go_molecular_function": "GO:0035591 signaling adaptor activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7T2F4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T2F6-1", "uniprot_id": "WSB1_DANRE", "mass": 47086.0, "length": 423, "protein_name": "WD repeat and SOCS box-containing protein 1", "gene_name": "wsb1", "organism": "Zebrafish", "refseq_name": "WD repeat and SOCS box-containing protein 1", "refseq_ac": "NP_955927", "gene_names_uniprotkb": "wsb1", "gene_names_refseq": "wsb1; wu:fb92g11; zgc:63905", "protein_names_uniprotkb": "WD repeat and SOCS box-containing protein 1; WSB-1", "protein_names_refseq": "SOCS box-containing WD protein SWiP-1; WD repeat and SOCS box-containing protein 1; WSB-1", "tax_id": 7955, "disease": "", "pathway": " (dre:323226); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054567.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054567.1., [RefSeq]; Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0000209 protein polyubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T2F6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T316-1", "uniprot_id": "TM231_DANRE", "mass": 35538.0, "length": 309, "protein_name": "Transmembrane protein 231", "gene_name": "tmem231", "organism": "Zebrafish", "refseq_name": "transmembrane protein 231", "refseq_ac": "NP_956681", "gene_names_uniprotkb": "tmem231; zgc:64166", "gene_names_refseq": "tmem231; zgc:64166", "protein_names_uniprotkb": "Transmembrane protein 231", "protein_names_refseq": "chst5; transmembrane protein 231", "tax_id": 7955, "disease": "Meckel syndrome (Disease Ontology:DOID:0050778); Joubert syndrome 20 (Disease Ontology:DOID:0110989); orofaciodigital syndrome (Disease Ontology:DOID:4501)", "pathway": " (dre:393358)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053293.1, EG576735.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053293.1., [RefSeq]; Transmembrane component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling (By similarity)., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "E9QBY7;F1QPZ2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0036038 MKS complex;GO:0060170 ciliary membrane;GO:0035869 ciliary transition zone", "go_biological_process": "GO:0032880 regulation of protein localization;GO:0060271 cilium assembly;GO:0007224 smoothened signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7T316-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T320-1", "uniprot_id": "GORAB_DANRE", "mass": 37954.0, "length": 336, "protein_name": "RAB6-interacting golgin", "gene_name": "gorab", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "gorab; scyl1bp1; zgc:101095; zgc:64162", "gene_names_refseq": "", "protein_names_uniprotkb": "RAB6-interacting golgin; N-terminal kinase-like-binding protein 1; NTKL-BP1; NTKL-binding protein 1; SCY1-like 1-binding protein 1; SCYL1-BP1; SCYL1-binding protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "geroderma osteodysplasticum (Disease Ontology:DOID:0111266)", "pathway": " (dre:393356)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;28546340", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus", "go_biological_process": "GO:1905515 non-motile cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7T320-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T338-1", "uniprot_id": "FGOP2_DANRE", "mass": 25007.0, "length": 215, "protein_name": "FGFR1 oncogene partner 2 homolog", "gene_name": "fgfr1op2", "organism": "Zebrafish", "refseq_name": "FGFR1 oncogene partner 2 homolog", "refseq_ac": "NP_956249", "gene_names_uniprotkb": "fgfr1op2; si:ch211-203h15.2; zgc:64126", "gene_names_refseq": "fgfr1op2; wu:fj17h04; zgc:64126", "protein_names_uniprotkb": "FGFR1 oncogene partner 2 homolog", "protein_names_refseq": "FGFR1 oncogene partner 2 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:335511)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053266.1, EE325187.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053266.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009611 response to wounding", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7T338-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T347-1", "uniprot_id": "UFSP2_DANRE", "mass": 44862.0, "length": 401, "protein_name": "Ufm1-specific protease 2", "gene_name": "ufsp2", "organism": "Zebrafish", "refseq_name": "ufm1-specific protease 2 isoform 2", "refseq_ac": "NP_942105", "gene_names_uniprotkb": "ufsp2; cb891; fb05c06; fk89d04; wu:fb05c06; wu:fk89d04; zgc:64113", "gene_names_refseq": "cb891; fb05c06; fk89d04; ufsp2; wu:fb05c06; wu:fk89d04; zgc:64113", "protein_names_uniprotkb": "Ufm1-specific protease 2; 3.4.22.-; UfSP2", "protein_names_refseq": "ufm1-specific protease 2 isoform 2; ufm1-specific protease 2", "tax_id": 7955, "disease": "early infantile epileptic encephalopathy (Disease Ontology:DOID:0050709); developmental and epileptic encephalopathy 106 (Disease Ontology:DOID:0070392); Beukes hip dysplasia (Disease Ontology:DOID:0111367)", "pathway": " (dre:336782)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.18694788.1, SRR26395039.1269777.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On or before Aug 8, 2025 this sequence version replaced XP_005168394.1, NP_942105.1., [RefSeq]; Thiol-dependent isopeptidase that specifically cleaves UFM1, a ubiquitin-like modifier protein, from conjugated proteins. While it is also able to mediate the processing of UFM1 precursors, a prerequisite for conjugation reactions, ufsp2 mainly acts as a protein deUFMylase that mediates deconjugation of UFM1 from target proteins., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0071567 deUFMylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0032790 ribosome disassembly;GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T347-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T352-1", "uniprot_id": "TM263_DANRE", "mass": 11865.0, "length": 120, "protein_name": "Transmembrane protein 263", "gene_name": "tmem263", "organism": "Zebrafish", "refseq_name": "transmembrane protein 263", "refseq_ac": "NP_998306", "gene_names_uniprotkb": "tmem263; fc21f01; si:dkey-227k11.2; wu:fc21f01; zgc:64098", "gene_names_refseq": "fc21f01; tmem263; wu:fc21f01; zgc:64098", "protein_names_uniprotkb": "Transmembrane protein 263", "protein_names_refseq": "UPF0444 transmembrane protein C12orf23 homolog; transmembrane protein 263", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "15520368;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053251.1, AY398380.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476809 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053251.1., [RefSeq]; May play a role in bone development., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q7T352-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T356-1", "uniprot_id": "143BB_DANRE", "mass": 27393.0, "length": 242, "protein_name": "14-3-3 protein beta/alpha-B", "gene_name": "ywhabb", "organism": "Zebrafish", "refseq_name": "14-3-3 protein beta/alpha-B", "refseq_ac": "NP_998310", "gene_names_uniprotkb": "ywhabb; ywhab2; ywhab; zgc:64092", "gene_names_refseq": "wu:fb22g04; wu:fr86a12; ywhab2; ywhabb; ywhab; zgc:64092", "protein_names_uniprotkb": "14-3-3 protein beta/alpha-B", "protein_names_refseq": "14-3-3 protein beta/alpha-2; 14-3-3 protein beta/alpha-B; tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 2", "tax_id": 7955, "disease": "intellectual disability (Disease Ontology:DOID:1059); brain ischemia (Disease Ontology:DOID:2316)", "pathway": " (dre:406419); (R-DRE-111447); (R-DRE-165159); (R-DRE-170968); (R-DRE-2028269); (R-DRE-392517); (R-DRE-450385); (R-DRE-450513); (R-DRE-5625740); (R-DRE-5628897); (R-DRE-5673000); (R-DRE-5674135); (R-DRE-5675221); (R-DRE-75035); (R-DRE-9614399)", "pathway_count": 15, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053247.1, EH498357.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053247.1., [RefSeq]; Adapter protein implicated in the regulation of a large spectrum of both general and specialized signaling pathways. Binds to a large number of partners, usually by recognition of a phosphoserine or phosphothreonine motif. Binding generally results in the modulation of the activity of the binding partner (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0008104 intracellular protein localization", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7T356-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T364-1", "uniprot_id": "TPL2B_DANRE", "mass": 21301.0, "length": 186, "protein_name": "Tumor necrosis factor, alpha-induced protein 8-like protein 2 B", "gene_name": "tnfaip8l2b", "organism": "Zebrafish", "refseq_name": "tumor necrosis factor, alpha-induced protein 8-like protein 2 B", "refseq_ac": "NP_956668", "gene_names_uniprotkb": "tnfaip8l2b; tnfaip8l2; tnfaip8l; zgc:64074", "gene_names_refseq": "TIPE2 B; tnfaip8l2a; tnfaip8l2b; tnfaip8l2; tnfaip8l; zgc:64074", "protein_names_uniprotkb": "Tumor necrosis factor, alpha-induced protein 8-like protein 2 B; TIPE2 B; TNF alpha-induced protein 8-like protein 2 B; TNFAIP8-like protein 2 B", "protein_names_refseq": "TIPE2 A; TNF alpha-induced protein 8-like protein 2 B; TNFAIP8-like protein 2 A; TNFAIP8-like protein 2 B; tumor necrosis factor, alpha-induced protein 8, like 2; tumor necrosis factor, alpha-induced protein 8-like protein 2 A; tumor necrosis factor, alpha-induced protein 8-like protein 2 B", "tax_id": 7955, "disease": "", "pathway": " (dre:393345); (R-DRE-1483255)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053238.1, CA469826.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476752, SAMEA4476757 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053238.1., [RefSeq]; Acts as a negative regulator of innate and adaptive immunity by maintaining immune homeostasis. Negative regulator of Toll-like receptor and T-cell receptor function. Prevents hyperresponsiveness of the immune system and maintains immune homeostasis. Inhibits jun/ap1 and NF-kappa-B activation. Promotes Fas-induced apoptosis (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response;GO:0050728 negative regulation of inflammatory response;GO:0042981 regulation of apoptotic process;GO:1902531 regulation of intracellular signal transduction;GO:0050868 negative regulation of T cell activation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T364-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T385-1", "uniprot_id": "VTC1A_DANRE", "mass": 44315.0, "length": 383, "protein_name": "V-type proton ATPase subunit C 1-A", "gene_name": "atp6v1c1a", "organism": "Zebrafish", "refseq_name": "V-type proton ATPase subunit C 1-A", "refseq_ac": "NP_958479", "gene_names_uniprotkb": "atp6v1c1a; atp6v1c1; zgc:64034", "gene_names_refseq": "ATPase; atp6v1c1a; atp6v1c1; si:zc215i13.2; wu:fd12h05", "protein_names_uniprotkb": "V-type proton ATPase subunit C 1-A; V-ATPase subunit C 1-A; Vacuolar proton pump subunit C 1-A", "protein_names_refseq": "ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C; ATPase, H+ transporting, lysosomal, V1 subunit C1a; V-ATPase subunit C 1-A; V-type proton ATPase subunit C 1-A; vacuolar proton pump subunit C 1-A", "tax_id": 7955, "disease": "oral squamous cell carcinoma (Disease Ontology:DOID:0050866); cancer (Disease Ontology:DOID:162); stomach carcinoma (Disease Ontology:DOID:5517)", "pathway": " (dre:368907); (R-DRE-1222556); (R-DRE-77387); (R-DRE-917977); (R-DRE-9639288); (R-DRE-983712)", "pathway_count": 6, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053214.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053214.1., [RefSeq]; Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons (By similarity). V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it promotes acidification of the extracellular environment (By similarity). The V-ATPase complex also acts as an activator for mTORC1 on lysosomal membrane by promoting the guanine nucleotide exchange factor (GEF) of the Ragulator complex, thereby enabling mTORC1 recruitment (By similarity). Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046961 proton-transporting ATPase activity, rotational mechanism", "go_cellular_component": "GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7T385-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T392-1", "uniprot_id": "T179B_DANRE", "mass": 24546.0, "length": 219, "protein_name": "Transmembrane protein 179B", "gene_name": "tmem179b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 179B", "refseq_ac": "NP_001018325", "gene_names_uniprotkb": "tmem179b; zgc:110591", "gene_names_refseq": "im:6903984; tmem179ba; tmem179b; zgc:110591", "protein_names_uniprotkb": "Transmembrane protein 179B", "protein_names_refseq": "transmembrane protein 179B", "tax_id": 7955, "disease": "", "pathway": " (dre:402849); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01004214.1, GFIL01044384.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476732, SAMEA4476734 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Jul 6, 2005 this sequence version replaced XP_701864.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q503H7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7T392-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T3B0-1", "uniprot_id": "EIF3M_DANRE", "mass": 42699.0, "length": 375, "protein_name": "Eukaryotic translation initiation factor 3 subunit M", "gene_name": "eif3m", "organism": "Zebrafish", "refseq_name": "eukaryotic translation initiation factor 3 subunit M", "refseq_ac": "NP_001019906", "gene_names_uniprotkb": "eif3m; si:ch211-4l14.1; zgc:63996", "gene_names_refseq": "GA17; eif3m; fa16c10; fc41f09; pcid1; wu:fa16c10; wu:fc41f09; zgc:63996", "protein_names_uniprotkb": "Eukaryotic translation initiation factor 3 subunit M; eIF3m", "protein_names_refseq": "PCI domain containing 1 (herpesvirus entry mediator); dendritic cell protein; eukaryotic translation initiation factor 3 subunit M", "tax_id": 7955, "disease": "", "pathway": " (dre:334626); (R-DRE-156827); (R-DRE-72649); (R-DRE-72689); (R-DRE-72695); (R-DRE-72702)", "pathway_count": 6, "publication_count": 2, "publication_id_list": "15520368;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY398350.1, BC053188.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY398350.1. On Jul 6, 2005 this sequence version replaced XP_691690.1., [RefSeq]; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1L885", "ec_number_list": "", "go_molecular_function": "GO:0003743 translation initiation factor activity", "go_cellular_component": "GO:0016282 eukaryotic 43S preinitiation complex;GO:0033290 eukaryotic 48S preinitiation complex;GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m;GO:0005852 eukaryotic translation initiation factor 3 complex", "go_biological_process": "GO:0002183 cytoplasmic translational initiation;GO:0001732 formation of cytoplasmic translation initiation complex", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q7T3B0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T3C3-1", "uniprot_id": "CUTA_DANRE", "mass": 16935.0, "length": 150, "protein_name": "Protein CutA homolog", "gene_name": "cuta", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "cuta; zgc:63972", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein CutA homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:572862)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12234666", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005507 copper ion binding", "go_cellular_component": "", "go_biological_process": "GO:0010038 response to metal ion", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7T3C3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T3D0-1", "uniprot_id": "TP8L3_DANRE", "mass": 23200.0, "length": 202, "protein_name": "Tumor necrosis factor alpha-induced protein 8-like protein 3", "gene_name": "tnfaip8l3", "organism": "Zebrafish", "refseq_name": "tumor necrosis factor alpha-induced protein 8-like protein 3", "refseq_ac": "NP_956645", "gene_names_uniprotkb": "tnfaip8l3; si:ch211-12a1.1; zgc:63960", "gene_names_refseq": "tnfaip8l3; zgc:63960", "protein_names_uniprotkb": "Tumor necrosis factor alpha-induced protein 8-like protein 3; TNF alpha-induced protein 8-like protein 3; TNFAIP8-like protein 3", "protein_names_refseq": "TNF alpha-induced protein 8-like protein 3; TNFAIP8-like protein 3; tumor necrosis factor alpha-induced protein 8-like protein 3; tumor necrosis factor, alpha-induced protein 8-like protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:393322); (R-DRE-1483255)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01041412.1, GDQH01012390.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA4476757 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On Jun 30, 2025 this sequence version replaced XP_073785039.1., [RefSeq]; May act as a lipid transfer protein., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008526 phosphatidylinositol transfer activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0015914 phospholipid transport;GO:0042981 regulation of apoptotic process;GO:1902531 regulation of intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7T3D0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T3F7-1", "uniprot_id": "CHRD1_DANRE", "mass": 38398.0, "length": 341, "protein_name": "Cysteine and histidine-rich domain-containing protein 1", "gene_name": "chordc1", "organism": "Zebrafish", "refseq_name": "cysteine and histidine-rich domain-containing protein 1", "refseq_ac": "NP_956633", "gene_names_uniprotkb": "chordc1; zgc:63894", "gene_names_refseq": "chordc1b; chordc1; zgc:63894", "protein_names_uniprotkb": "Cysteine and histidine-rich domain-containing protein 1; CHORD domain-containing protein 1; Morgana", "protein_names_refseq": "CHORD domain-containing protein 1; cysteine and histidine-rich domain (CHORD)-containing, zinc binding protein 1; cysteine and histidine-rich domain-containing protein 1; morgana", "tax_id": 7955, "disease": "chronic myeloid leukemia (Disease Ontology:DOID:8552)", "pathway": " (dre:393310)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053137.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053137.1., [RefSeq]; Regulates centrosome duplication., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "GO:0010824 regulation of centrosome duplication;GO:0051298 centrosome duplication", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7T3F7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T3H7-1", "uniprot_id": "MED18_DANRE", "mass": 23289.0, "length": 208, "protein_name": "Mediator of RNA polymerase II transcription subunit 18", "gene_name": "med18", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 18", "refseq_ac": "NP_956629", "gene_names_uniprotkb": "med18", "gene_names_refseq": "med18; zgc:63855", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 18; Mediator complex subunit 18", "protein_names_refseq": "mediator complex subunit 18; mediator of RNA polymerase II transcription subunit 18", "tax_id": 7955, "disease": "", "pathway": " (dre:393306)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053113.1, EH546125.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA4476737 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053113.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex;GO:0070847 core mediator complex", "go_biological_process": "GO:0060261 positive regulation of transcription initiation by RNA polymerase II;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T3H7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7T3H9-1", "uniprot_id": "HYI_DANRE", "mass": 31186.0, "length": 276, "protein_name": "Putative hydroxypyruvate isomerase", "gene_name": "hyi", "organism": "Zebrafish", "refseq_name": "putative hydroxypyruvate isomerase", "refseq_ac": "NP_956628", "gene_names_uniprotkb": "hyi; zgc:63850", "gene_names_refseq": "hyi; zgc:63850", "protein_names_uniprotkb": "Putative hydroxypyruvate isomerase; 5.3.1.22", "protein_names_refseq": "hydroxypyruvate isomerase homolog; putative hydroxypyruvate isomerase", "tax_id": 7955, "disease": "", "pathway": " (dre:393305)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01002973.1, GFIL01013050.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Jun 20, 2024 this sequence version replaced NP_956628.1., [RefSeq]; May catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "5.3.1.22", "go_molecular_function": "GO:0008903 hydroxypyruvate isomerase activity", "go_cellular_component": "", "go_biological_process": "GO:0046487 glyoxylate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7T3H9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZTI5-1", "uniprot_id": "MED21_DANRE", "mass": 15626.0, "length": 145, "protein_name": "Mediator of RNA polymerase II transcription subunit 21", "gene_name": "med21", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 21", "refseq_ac": "NP_998588", "gene_names_uniprotkb": "med21; si:ch211-203h15.4; surb7", "gene_names_refseq": "fk48d02; med21; surb7; wu:fk48d02; zgc:56532", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 21; Mediator complex subunit 21; RNA polymerase II holoenzyme component SRB7; RNAPII complex component SRB7", "protein_names_refseq": "RNA polymerase II holoenzyme component SRB7; RNAPII complex component SRB7; SRB7 suppressor of RNA polymerase B homolog; mediator of RNA polymerase II transcription subunit 21", "tax_id": 7955, "disease": "", "pathway": " (dre:406732)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049042.1, EH508486.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049042.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZTI5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZTU4-1", "uniprot_id": "Q7ZTU4_DANRE", "mass": 24519.0, "length": 221, "protein_name": "Platelet-activating factor acetylhydrolase IB subunit alpha1", "gene_name": "pafah1b3", "organism": "Zebrafish", "refseq_name": "platelet-activating factor acetylhydrolase IB subunit gamma", "refseq_ac": "NP_957352", "gene_names_uniprotkb": "pafah1b3; zgc:56430", "gene_names_refseq": "pafah1b3; zgc:56430", "protein_names_uniprotkb": "Platelet-activating factor acetylhydrolase IB subunit alpha1; 3.1.1.47; PAF acetylhydrolase 29 kDa subunit; PAF-AH subunit gamma", "protein_names_refseq": "platelet-activating factor acetylhydrolase IB subunit gamma", "tax_id": 7955, "disease": "", "pathway": " (dre:394033); (R-DRE-6811436)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "15520368;26083432;28252024;31712630;40044042", "class_list": "", "function": "Alpha1 catalytic subunit of the cytosolic type I platelet-activating factor (PAF) acetylhydrolase (PAF-AH (I)) heterotetrameric enzyme that catalyzes the hydrolyze of the acetyl group at the sn-2 position of PAF and its analogs and modulates the action of PAF. The activity and substrate specificity of PAF-AH (I) are affected by its subunit composition. Both alpha1/alpha1 homodimer (PAFAH1B3/PAFAH1B3 homodimer) and alpha1/alpha2 heterodimer(PAFAH1B3/PAFAH1B2 heterodimer) hydrolyze 1-O-alkyl-2-acetyl-sn-glycero-3-phosphoric acid (AAGPA) more efficiently than PAF, but they have little hydrolytic activity towards 1-O-alkyl-2-acetyl-sn-glycero-3-phosphorylethanolamine (AAGPE). Plays an important role during the development of brain., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8QF79;F6NHX8", "ec_number_list": "3.1.1.47", "go_molecular_function": "GO:0047179 platelet-activating factor acetyltransferase activity;GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0008247 1-alkyl-2-acetylglycerophosphocholine esterase complex", "go_biological_process": "GO:0007283 spermatogenesis;GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q7ZTU4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZTY6-1", "uniprot_id": "INT15_DANRE", "mass": 52353.0, "length": 475, "protein_name": "Integrator complex subunit 15", "gene_name": "ints15", "organism": "Zebrafish", "refseq_name": "integrator complex subunit 15", "refseq_ac": "NP_956619", "gene_names_uniprotkb": "ints15; zgc:56409; zgc:77458", "gene_names_refseq": "ints15; zgc:56409; zgc:77458", "protein_names_uniprotkb": "Integrator complex subunit 15", "protein_names_refseq": "integrator complex subunit 15; uncharacterized protein C7orf26 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:393295)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC052107.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC052107.1., [RefSeq]; Component of the integrator complex, a multiprotein complex that terminates RNA polymerase II (Pol II) transcription in the promoter-proximal region of genes. The integrator complex provides a quality checkpoint during transcription elongation by driving premature transcription termination of transcripts that are unfavorably configured for transcriptional elongation: the complex terminates transcription by (1) catalyzing dephosphorylation of the C-terminal domain (CTD) of Pol II subunit POLR2A/RPB1 and SUPT5H/SPT5, (2) degrading the exiting nascent RNA transcript via endonuclease activity and (3) promoting the release of Pol II from bound DNA. The integrator complex is also involved in terminating the synthesis of non-coding Pol II transcripts, such as enhancer RNAs (eRNAs), small nuclear RNAs (snRNAs), telomerase RNAs and long non-coding RNAs (lncRNAs). INTS15 is part of the integrator tail module that acts as a platform for the recruitment of transcription factors at promoters. Within the integrator complex, INTS15 is required to bridge different integrator modules., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6NYU1", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome;GO:0032039 integrator complex;GO:0160232 INTAC complex", "go_biological_process": "GO:0160240 RNA polymerase II transcription initiation surveillance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZTY6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZTZ2-1", "uniprot_id": "RLP24_DANRE", "mass": 19147.0, "length": 161, "protein_name": "Probable ribosome biogenesis protein RLP24", "gene_name": "rsl24d1", "organism": "Zebrafish", "refseq_name": "probable ribosome biogenesis protein RLP24", "refseq_ac": "NP_998158", "gene_names_uniprotkb": "rsl24d1; zgc:56202", "gene_names_refseq": "c15orf15; rsl24d1; wu:fa94f12; wu:fa95d02; zgc:56202", "protein_names_uniprotkb": "Probable ribosome biogenesis protein RLP24; Ribosomal L24 domain-containing protein 1", "protein_names_refseq": "probable ribosome biogenesis protein RLP24; ribosomal L24 domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:406266)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC051780.1, EH448004.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC051780.1., [RefSeq]; Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of GTPBP4/NOG1 to pre-60S particles (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0042273 ribosomal large subunit biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZTZ2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZU79-1", "uniprot_id": "Q7ZU79_DANRE", "mass": 65889.0, "length": 572, "protein_name": "Cell division control protein 45 homolog", "gene_name": "cdc45", "organism": "Zebrafish", "refseq_name": "cell division control protein 45 homolog", "refseq_ac": "NP_998551", "gene_names_uniprotkb": "cdc45; cdc45l; wu:fi05h01; zgc:56264", "gene_names_refseq": "cdc45l; cdc45; wu:fi05h01; zgc:56264", "protein_names_uniprotkb": "Cell division control protein 45 homolog", "protein_names_refseq": "cell division control protein 45 homolog", "tax_id": 7955, "disease": "Meier-Gorlin syndrome (Disease Ontology:DOID:0060306); chromosome 22q11.2 deletion syndrome, distal (Disease Ontology:DOID:0060413); Meier-Gorlin syndrome 7 (Disease Ontology:DOID:0080518)", "pathway": " (dre:406695); (R-DRE-68962)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "16109975;25564650;26137170;26321646;26469318;32367800;33279959;35641933;37794116;38321933", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC050511.1, BC154772.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC050511.1. Sequence Note: This sequence has been modified as follows: removed 33 bp suspected to be vector contamination from the 5' end. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0S615;F6P5F1", "ec_number_list": "", "go_molecular_function": "GO:0003688 DNA replication origin binding;GO:0003682 chromatin binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0031261 DNA replication preinitiation complex", "go_biological_process": "GO:1902977 mitotic DNA replication preinitiation complex assembly;GO:0051301 cell division;GO:0006270 DNA replication initiation;GO:0000727 double-strand break repair via break-induced replication", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q7ZU79-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUB3-1", "uniprot_id": "TSN31_DANRE", "mass": 23270.0, "length": 212, "protein_name": "Tetraspanin-31", "gene_name": "tspan31", "organism": "Zebrafish", "refseq_name": "tetraspanin-31", "refseq_ac": "NP_956575", "gene_names_uniprotkb": "tspan31; sas; zgc:56710", "gene_names_refseq": "sas; tspan31; zgc:56710", "protein_names_uniprotkb": "Tetraspanin-31; Sarcoma-amplified sequence homolog; Tspan-31", "protein_names_refseq": "sarcoma amplified sequence; sarcoma-amplified sequence homolog; tetraspanin-31; tspan-31", "tax_id": 7955, "disease": "", "pathway": " (dre:393251)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049345.1, AY398411.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049345.1., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q6TGU5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZUB3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUG5-1", "uniprot_id": "RS21_DANRE", "mass": 8902.0, "length": 81, "protein_name": "Small ribosomal subunit protein eS21", "gene_name": "rps21", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein eS21", "refseq_ac": "NP_957485", "gene_names_uniprotkb": "rps21", "gene_names_refseq": "rps21; zgc:56642; zgc:86816", "protein_names_uniprotkb": "Small ribosomal subunit protein eS21; 40S ribosomal protein S21", "protein_names_refseq": "40S ribosomal protein S21; small ribosomal subunit protein eS21", "tax_id": 7955, "disease": "", "pathway": " (dre:394166); (R-DRE-156827); (R-DRE-1799339); (R-DRE-6791226); (R-DRE-72649); (R-DRE-72689); (R-DRE-72695); (R-DRE-72702); (R-DRE-975956); (R-DRE-975957); (R-DRE-9954714); (R-DRE-9954716)", "pathway_count": 12, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049056.1, EH441954.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049056.1., [RefSeq]; Component of the small ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005791 rough endoplasmic reticulum;GO:0022627 cytosolic small ribosomal subunit", "go_biological_process": "GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0002181 cytoplasmic translation;GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7ZUG5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUH5-1", "uniprot_id": "RM14_DANRE", "mass": 15443.0, "length": 141, "protein_name": "Large ribosomal subunit protein uL14m", "gene_name": "mrpl14", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein uL14m precursor", "refseq_ac": "NP_957441", "gene_names_uniprotkb": "mrpl14; zgc:56531", "gene_names_refseq": "mrpl14; zgc:56531", "protein_names_uniprotkb": "Large ribosomal subunit protein uL14m; 39S ribosomal protein L14, mitochondrial; L14mt; MRP-L14", "protein_names_refseq": "39S ribosomal protein L14, mitochondrial; L14mt; MRP-L14; large ribosomal subunit protein uL14m precursor; large ribosomal subunit protein uL14m", "tax_id": 7955, "disease": "", "pathway": " (dre:394122); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049041.1, BC152227.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049041.1., [RefSeq]; May form part of 2 intersubunit bridges in the assembled ribosome. Upon binding to MALSU1, intersubunit bridge formation is blocked, preventing ribosome formation and repressing translation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit;GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZUH5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUU1-1", "uniprot_id": "UNC50_DANRE", "mass": 30554.0, "length": 259, "protein_name": "Protein unc-50 homolog", "gene_name": "unc50", "organism": "Zebrafish", "refseq_name": "protein unc-50 homolog", "refseq_ac": "NP_956541", "gene_names_uniprotkb": "unc50", "gene_names_refseq": "unc50; zgc:56114", "protein_names_uniprotkb": "Protein unc-50 homolog", "protein_names_refseq": "protein unc-50 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:393217)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC047831.1, EG579245.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC047831.1., [RefSeq]; Involved in the cell surface expression of neuronal nicotinic receptors (By similarity). Binds RNA (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005637 nuclear inner membrane", "go_biological_process": "GO:0034394 protein localization to cell surface", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZUU1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUV0-1", "uniprot_id": "AN13C_DANRE", "mass": 55478.0, "length": 488, "protein_name": "Ankyrin repeat domain-containing protein 13C", "gene_name": "ankrd13c", "organism": "Zebrafish", "refseq_name": "ankyrin repeat domain-containing protein 13C", "refseq_ac": "NP_999855", "gene_names_uniprotkb": "ankrd13c; zgc:56077", "gene_names_refseq": "ankrd13c; fc57c01; wu:fc57c01; wu:fq56c05; zgc:56077", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein 13C", "protein_names_refseq": "ankyrin repeat domain-containing protein 13C", "tax_id": 7955, "disease": "", "pathway": " (dre:325167)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC047821.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC047821.1., [RefSeq]; Acts as a molecular chaperone for G protein-coupled receptors, regulating their biogenesis and exit from the ER., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005102 signaling receptor binding;GO:0140597 protein carrier chaperone", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006612 protein targeting to membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZUV0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUW4-1", "uniprot_id": "Q7ZUW4_DANRE", "mass": 20342.0, "length": 180, "protein_name": "ADP-ribosylation factor", "gene_name": "arf5", "organism": "Zebrafish", "refseq_name": "ADP-ribosylation factor 5", "refseq_ac": "NP_954969", "gene_names_uniprotkb": "arf5; cb445; cb789; sb:cb445; wu:fa06c04; wu:fb16f02", "gene_names_refseq": "arf5; cb445; cb789; sb:cb445; wu:fa06c04; wu:fb16f02", "protein_names_uniprotkb": "ADP-ribosylation factor", "protein_names_refseq": "ADP-ribosylation factor 5", "tax_id": 7955, "disease": "", "pathway": " (dre:378724); (R-DRE-6807878); (R-DRE-6811434)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "23000284;26469318;28252024;29145436", "class_list": "", "function": "GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus., [UniProtKB, UniProtKB]; When arf5 expression was reduced by morpholino knockdown, the trimethyltin chloride-induced vascular deficits were significantly less pronounced than control morphants, so arf5 plays a significant role in trimethyltin chloride-mediated vascular toxicity., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KQA2", "ec_number_list": "", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q7ZUW4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUX1-1", "uniprot_id": "RPC3_DANRE", "mass": 60489.0, "length": 539, "protein_name": "DNA-directed RNA polymerase III subunit RPC3", "gene_name": "polr3c", "organism": "Zebrafish", "refseq_name": "DNA-directed RNA polymerase III subunit RPC3", "refseq_ac": "NP_956526", "gene_names_uniprotkb": "polr3c; zgc:56348", "gene_names_refseq": "polr3c; zgc:56348", "protein_names_uniprotkb": "DNA-directed RNA polymerase III subunit RPC3; DNA-directed RNA polymerase III subunit C; RNA polymerase III subunit C3", "protein_names_refseq": "DNA-directed RNA polymerase III subunit C; DNA-directed RNA polymerase III subunit RPC3; RNA polymerase III subunit C3", "tax_id": 7955, "disease": "", "pathway": " (dre:393201); (R-DRE-76061); (R-DRE-76066); (R-DRE-76071)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046092.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046092.1., [RefSeq]; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005666 RNA polymerase III complex;GO:0000428 DNA-directed RNA polymerase complex", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZUX1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZUZ0-1", "uniprot_id": "CSN8_DANRE", "mass": 21546.0, "length": 191, "protein_name": "COP9 signalosome complex subunit 8", "gene_name": "cops8", "organism": "Zebrafish", "refseq_name": "COP9 signalosome complex subunit 8", "refseq_ac": "NP_956523", "gene_names_uniprotkb": "cops8; zgc:56319", "gene_names_refseq": "cops8; zgc:56319; zgc:86840", "protein_names_uniprotkb": "COP9 signalosome complex subunit 8; Signalosome subunit 8", "protein_names_refseq": "COP9 constitutive photomorphogenic homolog subunit 8; COP9 signalosome complex subunit 8; signalosome subunit 8", "tax_id": 7955, "disease": "", "pathway": " (dre:393198); (R-DRE-5696394); (R-DRE-6781823); (R-DRE-8856825); (R-DRE-8951664)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046071.1, EH439481.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046071.1., [RefSeq]; Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0010387 COP9 signalosome assembly;GO:0000338 protein deneddylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZUZ0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZV14-1", "uniprot_id": "GPX8_DANRE", "mass": 23806.0, "length": 210, "protein_name": "Probable glutathione peroxidase 8", "gene_name": "gpx8", "organism": "Zebrafish", "refseq_name": "probable glutathione peroxidase 8", "refseq_ac": "NP_956516", "gene_names_uniprotkb": "gpx8; zgc:56280", "gene_names_refseq": "gpx8; zgc:56280", "protein_names_uniprotkb": "Probable glutathione peroxidase 8; 1.11.1.9; GPx-8; GSHPx-8", "protein_names_refseq": "GPx-8; GSHPx-8; probable glutathione peroxidase 8", "tax_id": 7955, "disease": "", "pathway": " (dre:393191); (R-DRE-3299685)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046044.1, EE328783.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505393, SAMEA4476752 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046044.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "5.3.4.1;1.8.3.2;1.11.1.9", "go_molecular_function": "GO:0004601 peroxidase activity;GO:0004602 glutathione peroxidase activity", "go_cellular_component": "GO:0005788 endoplasmic reticulum lumen;GO:0016020 membrane", "go_biological_process": "GO:0034599 cellular response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZV14-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZV20-1", "uniprot_id": "RRP15_DANRE", "mass": 28036.0, "length": 249, "protein_name": "RRP15-like protein", "gene_name": "rrp15", "organism": "Zebrafish", "refseq_name": "RRP15-like protein", "refseq_ac": "NP_956056", "gene_names_uniprotkb": "rrp15; zgc:56269", "gene_names_refseq": "rrp15; wu:fa20e10; zgc:56269", "protein_names_uniprotkb": "RRP15-like protein", "protein_names_refseq": "RRP15-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:327053)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046037.1, EH589796.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046037.1. On or before Jul 6, 2005 this sequence version replaced XP_685469.1, XP_707995.1, XP_707996.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0030687 preribosome, large subunit precursor", "go_biological_process": "GO:0000460 maturation of 5.8S rRNA;GO:0000470 maturation of LSU-rRNA", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZV20-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZV34-1", "uniprot_id": "MCTS1_DANRE", "mass": 20609.0, "length": 181, "protein_name": "Malignant T-cell-amplified sequence 1", "gene_name": "mcts1", "organism": "Zebrafish", "refseq_name": "malignant T-cell-amplified sequence 1", "refseq_ac": "NP_957365", "gene_names_uniprotkb": "mcts1; zgc:56242", "gene_names_refseq": "mcts1; zgc:56242", "protein_names_uniprotkb": "Malignant T-cell-amplified sequence 1; MCT-1", "protein_names_refseq": "MCT-1; malignant T cell amplified sequence 1; malignant T-cell-amplified sequence 1", "tax_id": 7955, "disease": "immunodeficiency 118 (Disease Ontology:DOID:0061084)", "pathway": " (dre:394046)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046019.1, EH455552.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046019.1., [RefSeq]; Plays a role as translation enhancer and involved in cell cycle regulation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0002188 translation reinitiation;GO:0006351 DNA-templated transcription;GO:0001731 formation of translation preinitiation complex", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7ZV34-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZV35-1", "uniprot_id": "MED7_DANRE", "mass": 27519.0, "length": 241, "protein_name": "Mediator of RNA polymerase II transcription subunit 7", "gene_name": "med7", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 7", "refseq_ac": "NP_956035", "gene_names_uniprotkb": "med7; crsp9", "gene_names_refseq": "crsp9; med7; wu:fd99d12; zgc:56241", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 7; CRSP complex subunit 9; Cofactor required for Sp1 transcriptional activation subunit 9; Mediator complex subunit 7", "protein_names_refseq": "CRSP complex subunit 9; cofactor required for Sp1 transcriptional activation subunit 9; cofactor required for Sp1 transcriptional activation, subunit 9, 33kDa; mediator of RNA polymerase II transcription subunit 7", "tax_id": 7955, "disease": "", "pathway": " (dre:326098)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046018.1, BC152676.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046018.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZV35-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZV46-1", "uniprot_id": "METRL_DANRE", "mass": 31709.0, "length": 286, "protein_name": "Meteorin-like protein", "gene_name": "metrnl", "organism": "Zebrafish", "refseq_name": "meteorin-like protein precursor", "refseq_ac": "NP_998150", "gene_names_uniprotkb": "metrnl; zgc:56225", "gene_names_refseq": "fc90a08; fj23b04; metrnla; metrnl; wu:fc90a08; wu:fj23b04; zgc:56225", "protein_names_uniprotkb": "Meteorin-like protein", "protein_names_refseq": "meteorin, glial cell differentiation regulator-like a; meteorin-like protein precursor; meteorin-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:406258)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC046006.1, EE303577.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046006.1., [RefSeq]; Hormone induced following exercise or cold exposure that promotes energy expenditure. Induced either in the skeletal muscle after exercise or in adipose tissue following cold exposure and is present in the circulation. Able to stimulate energy expenditure associated with the browning of the white fat depots and improves glucose tolerance (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0009409 response to cold;GO:0050873 brown fat cell differentiation;GO:0050728 negative regulation of inflammatory response;GO:0097009 energy homeostasis;GO:0014850 response to muscle activity", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZV46-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZVC9-1", "uniprot_id": "SMAP_DANRE", "mass": 18936.0, "length": 171, "protein_name": "Small acidic protein", "gene_name": "smap", "organism": "Zebrafish", "refseq_name": "small acidic protein", "refseq_ac": "NP_956488", "gene_names_uniprotkb": "smap; zgc:56106", "gene_names_refseq": "smap; zgc:56106", "protein_names_uniprotkb": "Small acidic protein", "protein_names_refseq": "small acidic protein", "tax_id": 7955, "disease": "", "pathway": " (dre:393163)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "18307296", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045914.1, EH547138.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505390, SAMEA4476728 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045914.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZVC9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZVF0-1", "uniprot_id": "POC1A_DANRE", "mass": 45728.0, "length": 416, "protein_name": "POC1 centriolar protein homolog A", "gene_name": "poc1a", "organism": "Zebrafish", "refseq_name": "POC1 centriolar protein homolog A", "refseq_ac": "NP_998214", "gene_names_uniprotkb": "poc1a; wdr51a; wu:fl82d01; zgc:56055", "gene_names_refseq": "poc1a; wdr51a; wu:fl82d01; zgc:56055", "protein_names_uniprotkb": "POC1 centriolar protein homolog A; WD repeat domain 51A", "protein_names_refseq": "POC1 centriolar protein homolog A", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045888.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045888.1. On Jul 6, 2005 this sequence version replaced XP_702605.1., [RefSeq]; May play an important role in centriole assembly and/or stability and ciliogenesis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005814 centriole;GO:0036064 ciliary basal body", "go_biological_process": "GO:0060271 cilium assembly;GO:0007017 microtubule-based process;GO:0048871 multicellular organismal-level homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZVF0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZVH1-1", "uniprot_id": "MPRGA_DANRE", "mass": 39356.0, "length": 345, "protein_name": "Membrane progestin receptor gamma-A", "gene_name": "paqr5a", "organism": "Zebrafish", "refseq_name": "membrane progestin receptor gamma-A", "refseq_ac": "NP_956481", "gene_names_uniprotkb": "paqr5a; mprg; paqr5; zgc:56016", "gene_names_refseq": "paqr5a; paqr5; zgc:56016", "protein_names_uniprotkb": "Membrane progestin receptor gamma-A; Progestin and adipoQ receptor family member V-A; mPR gamma-A", "protein_names_refseq": "mPR gamma-A; membrane progestin receptor gamma-A; progestin and adipoQ receptor family member V-A", "tax_id": 7955, "disease": "", "pathway": " (dre:393156)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045864.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898400, SAMEA898403 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045864.1. On Jul 6, 2005 this sequence version replaced XP_702252.1., [RefSeq]; Steroid membrane receptor. Binds progesterone. May be involved in oocyte maturation (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LUF6", "ec_number_list": "", "go_molecular_function": "GO:0005496 steroid binding;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0048477 oogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZVH1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZVM9-1", "uniprot_id": "RMI1_DANRE", "mass": 57581.0, "length": 519, "protein_name": "RecQ-mediated genome instability protein 1", "gene_name": "rmi1", "organism": "Zebrafish", "refseq_name": "recQ-mediated genome instability protein 1", "refseq_ac": "NP_956474", "gene_names_uniprotkb": "rmi1; zgc:55882", "gene_names_refseq": "rmi1; zgc:55882", "protein_names_uniprotkb": "RecQ-mediated genome instability protein 1", "protein_names_refseq": "RecQ mediated genome instability 1; recQ-mediated genome instability protein 1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-5685938); (R-DRE-5685942); (R-DRE-5693537); (R-DRE-5693568); (R-DRE-5693579); (R-DRE-5693607); (R-DRE-5693616); (R-DRE-6804756); (R-DRE-69473)", "pathway_count": 9, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045482.1, EH584608.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045482.1., [RefSeq]; Essential component of the RMI complex, a complex that plays an important role in the processing of homologous recombination intermediates to limit DNA crossover formation in cells. Promotes TOP3A binding to double Holliday junctions (DHJ) and hence stimulates TOP3A-mediated dissolution. Required for BLM phosphorylation during mitosis. Within the BLM complex, required for BLM and TOP3A stability (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0000166 nucleotide binding", "go_cellular_component": "GO:0016604 nuclear body;GO:0031422 RecQ family helicase-topoisomerase III complex", "go_biological_process": "GO:0000712 resolution of meiotic recombination intermediates;GO:0006260 DNA replication;GO:0000724 double-strand break repair via homologous recombination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZVM9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZVQ8-1", "uniprot_id": "NS1BB_DANRE", "mass": 71118.0, "length": 640, "protein_name": "Influenza virus NS1A-binding protein homolog B", "gene_name": "ivns1abpb", "organism": "Zebrafish", "refseq_name": "influenza virus NS1A-binding protein homolog B", "refseq_ac": "NP_958891", "gene_names_uniprotkb": "ivns1abpb; fi13f08; fi41c09; wu:fi13f08; wu:fi41c09", "gene_names_refseq": "fi13f08; fi41c09; ivns1abpb; wu:fi13f08; wu:fi41c09", "protein_names_uniprotkb": "Influenza virus NS1A-binding protein homolog B; NS1-BP homolog B; NS1-binding protein homolog B", "protein_names_refseq": "NS1-BP homolog B; NS1-binding protein homolog B; influenza virus NS1A-binding protein homolog B", "tax_id": 7955, "disease": "immunodeficiency 70 (Disease Ontology:DOID:0112005)", "pathway": " (dre:334334)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045449.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045449.1., [RefSeq]; Plays a role in cell division and in the dynamic organization of the actin skeleton as a stabilizer of actin filaments by association with F-actin through Kelch repeats., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:1990756 ubiquitin-like ligase-substrate adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0031463 Cul3-RING ubiquitin ligase complex", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZVQ8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZVT5-1", "uniprot_id": "ROGDI_DANRE", "mass": 32267.0, "length": 284, "protein_name": "Protein rogdi homolog", "gene_name": "rogdi", "organism": "Zebrafish", "refseq_name": "protein rogdi homolog", "refseq_ac": "NP_956257", "gene_names_uniprotkb": "rogdi; zgc:55665", "gene_names_refseq": "fj32e07; rogdi; wu:fj32e07; zgc:55665", "protein_names_uniprotkb": "Protein rogdi homolog", "protein_names_refseq": "protein rogdi homolog; rogdi homolog", "tax_id": 7955, "disease": "Kohlschutter-Tonz syndrome (Disease Ontology:DOID:0111668)", "pathway": " (dre:335642)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045418.1, EH550651.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505381 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045418.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0043291 RAVE complex;GO:0005635 nuclear envelope;GO:0030424 axon;GO:0030425 dendrite;GO:0043204 perikaryon", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZVT5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZVW1-1", "uniprot_id": "TM117_DANRE", "mass": 47573.0, "length": 401, "protein_name": "Transmembrane protein 117", "gene_name": "tmem117", "organism": "Zebrafish", "refseq_name": "transmembrane protein 117 isoform 3", "refseq_ac": "NP_998619", "gene_names_uniprotkb": "tmem117; wu:fi32b02; zgc:55574", "gene_names_refseq": "tmem117; wu:fi32b02; zgc:55574", "protein_names_uniprotkb": "Transmembrane protein 117", "protein_names_refseq": "transmembrane protein 117 isoform 3", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588732.18754973.1, SRR32588717.42036920.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476734, SAMEA4476756 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Jul 8, 2025 this sequence version replaced XP_073798055.1., [RefSeq]; May be involved in endoplasmic reticulum (ER) stress-induced cell death pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZVW1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZW33-1", "uniprot_id": "UTP15_DANRE", "mass": 57726.0, "length": 517, "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "utp15", "organism": "Zebrafish", "refseq_name": "U3 small nucleolar RNA-associated protein 15 homolog", "refseq_ac": "NP_955998", "gene_names_uniprotkb": "utp15", "gene_names_refseq": "fc55e07; flj12787; utp15; wu:fc55e07; zgc:55320", "protein_names_uniprotkb": "U3 small nucleolar RNA-associated protein 15 homolog", "protein_names_refseq": "U3 small nucleolar RNA-associated protein 15 homolog; utp15, U3 small nucleolar ribonucleoprotein, homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:325106)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15520368;21949834", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC045308.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045308.1., [RefSeq]; Mutation in utp15 disrupts vascular patterning in a p53-dependent manner., [RefSeq, PubMed]; Ribosome biogenesis factor. Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I. Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q6TGY5", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus;GO:0032040 small-subunit processome", "go_biological_process": "GO:0045766 positive regulation of angiogenesis;GO:0006364 rRNA processing;GO:0045943 positive regulation of transcription by RNA polymerase I;GO:0042274 ribosomal small subunit biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q7ZW33-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZWB2-1", "uniprot_id": "UBL4A_DANRE", "mass": 17320.0, "length": 157, "protein_name": "Ubiquitin-like protein 4A", "gene_name": "ubl4a", "organism": "Zebrafish", "refseq_name": "ubiquitin-like protein 4A", "refseq_ac": "NP_956594", "gene_names_uniprotkb": "ubl4a; si:dkey-32e23.2; zgc:56596", "gene_names_refseq": "ubl4a; zgc:56596", "protein_names_uniprotkb": "Ubiquitin-like protein 4A", "protein_names_refseq": "ubiquitin-like protein 4A", "tax_id": 7955, "disease": "", "pathway": " (dre:393270)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049498.1, EH546460.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049498.1., [RefSeq]; As part of a cytosolic protein quality control complex, the bag6/bat3 complex, maintains misfolded and hydrophobic patches-containing proteins in a soluble state and participates in their proper delivery to the endoplasmic reticulum or alternatively can promote their sorting to the proteasome where they undergo degradation. The bag6/bat3 complex is involved in the post-translational delivery of tail-anchored/type II transmembrane proteins to the endoplasmic reticulum membrane. Similarly, the bag6/bat3 complex also functions as a sorting platform for proteins of the secretory pathway that are mislocalized to the cytosol either delivering them to the proteasome for degradation or to the endoplasmic reticulum. The bag6/bat3 complex also plays a role in the endoplasmic reticulum-associated degradation (ERAD), a quality control mechanism that eliminates unwanted proteins of the endoplasmic reticulum through their retrotranslocation to the cytosol and their targeting to the proteasome. It maintains these retrotranslocated proteins in an unfolded yet soluble state condition in the cytosol to ensure their proper delivery to the proteasome., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0051087 protein-folding chaperone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0071818 BAT3 complex", "go_biological_process": "GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane;GO:0071816 tail-anchored membrane protein insertion into ER membrane", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZWB2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZWD4-1", "uniprot_id": "UAP1L_DANRE", "mass": 56414.0, "length": 505, "protein_name": "UDP-N-acetylhexosamine pyrophosphorylase-like protein 1", "gene_name": "uap1l1", "organism": "Zebrafish", "refseq_name": "UDP-N-acetylhexosamine pyrophosphorylase-like protein 1", "refseq_ac": "NP_956588", "gene_names_uniprotkb": "uap1l1; zgc:56509", "gene_names_refseq": "uap1l1; zgc:56509", "protein_names_uniprotkb": "UDP-N-acetylhexosamine pyrophosphorylase-like protein 1; 2.7.7.-", "protein_names_refseq": "UDP-N-acetylhexosamine pyrophosphorylase-like protein 1; UDP-N-acteylglucosamine pyrophosphorylase 1, like 1", "tax_id": 7955, "disease": "", "pathway": " (dre:393264)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049467.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049467.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity", "go_cellular_component": "", "go_biological_process": "GO:0006048 UDP-N-acetylglucosamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7ZWD4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZWE7-1", "uniprot_id": "NOL12_DANRE", "mass": 26515.0, "length": 228, "protein_name": "Nucleolar protein 12", "gene_name": "nol12", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "nol12; zgc:56457", "gene_names_refseq": "", "protein_names_uniprotkb": "Nucleolar protein 12", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:393260)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "May bind to rRNA., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0019843 rRNA binding", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZWE7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZWI4-1", "uniprot_id": "GSKIP_DANRE", "mass": 14918.0, "length": 133, "protein_name": "GSK3-beta interaction protein", "gene_name": "gskip", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "gskip; wu:fc74a11; wu:fd02b09; zgc:55683", "gene_names_refseq": "", "protein_names_uniprotkb": "GSK3-beta interaction protein; GSKIP", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:406744)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;33316259", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0051018 protein kinase A binding;GO:0019207 kinase regulator activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0030111 regulation of Wnt signaling pathway;GO:0060828 regulation of canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q7ZWI4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZWJ3-1", "uniprot_id": "OSTC_DANRE", "mass": 16706.0, "length": 149, "protein_name": "Oligosaccharyltransferase complex subunit ostc", "gene_name": "ostc", "organism": "Zebrafish", "refseq_name": "oligosaccharyltransferase complex subunit ostc", "refseq_ac": "NP_956563", "gene_names_uniprotkb": "ostc; zgc:56559", "gene_names_refseq": "ostc; zgc:56559; zgc:86623", "protein_names_uniprotkb": "Oligosaccharyltransferase complex subunit ostc", "protein_names_refseq": "oligosaccharyltransferase complex subunit ostc", "tax_id": 7955, "disease": "", "pathway": " (dre:393239); (R-DRE-9768727)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049047.1, EG586246.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049047.1., [RefSeq]; Specific component of the STT3A-containing form of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6IQT5", "ec_number_list": "", "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0008250 oligosaccharyltransferase complex", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7ZWJ3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZWJ4-1", "uniprot_id": "RL18A_DANRE", "mass": 20680.0, "length": 176, "protein_name": "Large ribosomal subunit protein eL20", "gene_name": "rpl18a", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein eL20", "refseq_ac": "NP_957354", "gene_names_uniprotkb": "rpl18a; zgc:56546", "gene_names_refseq": "rpl-20Co; rpl18a; zgc:56546", "protein_names_uniprotkb": "Large ribosomal subunit protein eL20; 60S ribosomal protein L18a", "protein_names_refseq": "60S ribosomal protein L18a; large ribosomal subunit protein eL20", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:394035); (R-DRE-156827); (R-DRE-1799339); (R-DRE-6791226); (R-DRE-72689); (R-DRE-975956); (R-DRE-975957); (R-DRE-9954709); (R-DRE-9954714); (R-DRE-9954716)", "pathway_count": 10, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049045.1, CF549772.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049045.1., [RefSeq]; Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LVB1", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0022625 cytosolic large ribosomal subunit", "go_biological_process": "GO:0002181 cytoplasmic translation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q7ZWJ4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZWJ7-1", "uniprot_id": "RL34_DANRE", "mass": 13369.0, "length": 117, "protein_name": "Large ribosomal subunit protein eL34", "gene_name": "rpl34", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein eL34", "refseq_ac": "NP_957416", "gene_names_uniprotkb": "rpl34; zgc:56455; zgc:77706", "gene_names_refseq": "rpl34; zgc:56455; zgc:77706", "protein_names_uniprotkb": "Large ribosomal subunit protein eL34; 60S ribosomal protein L34", "protein_names_refseq": "60S ribosomal protein L34; large ribosomal subunit protein eL34", "tax_id": 7955, "disease": "", "pathway": " (dre:394097); (R-DRE-156827); (R-DRE-1799339); (R-DRE-6791226); (R-DRE-72689); (R-DRE-975956); (R-DRE-975957); (R-DRE-9954709); (R-DRE-9954714); (R-DRE-9954716)", "pathway_count": 10, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049023.1, CK400954.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049023.1., [RefSeq]; Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0022625 cytosolic large ribosomal subunit;GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q7ZWJ7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZYY4-1", "uniprot_id": "FAM3C_DANRE", "mass": 24921.0, "length": 227, "protein_name": "Protein FAM3C", "gene_name": "fam3c", "organism": "Zebrafish", "refseq_name": "protein FAM3C precursor", "refseq_ac": "NP_997890", "gene_names_uniprotkb": "fam3c; si:dkey-159a18.2", "gene_names_refseq": "fam3c; wu:fb99h11; wu:fi35h03; zgc:55444; zgc:77090", "protein_names_uniprotkb": "Protein FAM3C", "protein_names_refseq": "family with sequence similarity 3 member C; protein FAM3C precursor; protein FAM3C", "tax_id": 7955, "disease": "", "pathway": " (dre:334205); (R-DRE-114608)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044170.1, BC066710.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044170.1., [RefSeq]; Involved in retinal laminar formation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6NY75", "ec_number_list": "", "go_molecular_function": "GO:0005125 cytokine activity;GO:0030246 carbohydrate binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZYY4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZZ00-1", "uniprot_id": "ZN511_DANRE", "mass": 32242.0, "length": 277, "protein_name": "Zinc finger protein 511", "gene_name": "znf511", "organism": "Zebrafish", "refseq_name": "zinc finger protein 511", "refseq_ac": "NP_001004531", "gene_names_uniprotkb": "znf511", "gene_names_refseq": "fb47g08; si:ch211-217g15.6; si:zc217g15.6; wu:fb47g08; zgc:136441; znf511", "protein_names_uniprotkb": "Zinc finger protein 511", "protein_names_refseq": "zinc finger protein 511", "tax_id": 7955, "disease": "", "pathway": " (dre:368916)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01047963.1, GDQQ01014220.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505378 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1ED05", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZZ00-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZZ03-1", "uniprot_id": "FUCM_DANRE", "mass": 16677.0, "length": 153, "protein_name": "Fucose mutarotase", "gene_name": "fuom", "organism": "Zebrafish", "refseq_name": "fucose mutarotase", "refseq_ac": "NP_001004530", "gene_names_uniprotkb": "fuom; si:ch211-217g15.2; zgc:101698", "gene_names_refseq": "1810014F10Rik; fuom; si:ch211-217g15.2; si:zc217g15.2; zgc:101698", "protein_names_uniprotkb": "Fucose mutarotase; 5.1.3.29", "protein_names_refseq": "fucose mutarotase; protein fucU homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:447896); (R-DRE-6787639)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081387.1, CN016146.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081387.1., [RefSeq]; Involved in the interconversion between alpha- and beta-L-fucoses., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "5.1.3.29", "go_molecular_function": "GO:0042806 fucose binding;GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0036373 L-fucose mutarotase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0006004 fucose metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZZ03-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZZ60-1", "uniprot_id": "Q7ZZ60_DANRE", "mass": 25058.0, "length": 219, "protein_name": "peptidylprolyl isomerase", "gene_name": "fkbp7", "organism": "Zebrafish", "refseq_name": "peptidyl-prolyl cis-trans isomerase FKBP7 precursor", "refseq_ac": "NP_001004506", "gene_names_uniprotkb": "fkbp7; FKBP; si:dz167c3.2", "gene_names_refseq": "FKBP; fkbp7; si:dz167c3.2", "protein_names_uniprotkb": "peptidylprolyl isomerase; 5.2.1.8", "protein_names_refseq": "FK506 binding protein 7; FK506-binding; peptidyl-prolyl cis-trans isomerase FKBP7 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:368498)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23326453;26469318;27189481;33376206;37259581", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH457709.1, EH443131.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505387, SAMEA3505391 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL714003.6., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "5.2.1.8", "go_molecular_function": "GO:0005509 calcium ion binding;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q7ZZ60-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZZ64-1", "uniprot_id": "Q7ZZ64_DANRE", "mass": 37299.0, "length": 325, "protein_name": "Uncharacterized protein LOC368709 isoform 1", "gene_name": "si:busm1-105l16.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC368709", "refseq_ac": "NP_001007211", "gene_names_uniprotkb": "si:busm1-105l16.2; si:dz105l16.2; si:dz75p05.3; zgc:136420", "gene_names_refseq": "si:busm1-105l16.2; si:dz105l16.2; si:dz75p05.3; zgc:136420", "protein_names_uniprotkb": "Uncharacterized protein LOC368709 isoform 1", "protein_names_refseq": "uncharacterized protein LOC368709", "tax_id": 7955, "disease": "", "pathway": " (dre:368709)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12477932", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505379, SAMEA4476800 [ECO:0000350] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AL713869.6., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1QBF4", "ec_number_list": "", "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q7ZZ64-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q7ZZY8-1", "uniprot_id": "UTS2B_DANRE", "mass": 13992.0, "length": 125, "protein_name": "Prepro-urotensin II-beta", "gene_name": "uts2b", "organism": "Zebrafish", "refseq_name": "prepro-urotensin II-beta precursor", "refseq_ac": "NP_991154", "gene_names_uniprotkb": "uts2b", "gene_names_refseq": "uts2b", "protein_names_uniprotkb": "Prepro-urotensin II-beta", "protein_names_refseq": "UII beta; UII-b; prepro-urotensin II-beta precursor; prepro-urotensin II-beta", "tax_id": 7955, "disease": "cardiomyopathy (Disease Ontology:DOID:0050700); pre-eclampsia (Disease Ontology:DOID:10591); hypertension (Disease Ontology:DOID:10763); heart disease (Disease Ontology:DOID:114); gestational diabetes (Disease Ontology:DOID:11714); endomyocardial fibrosis (Disease Ontology:DOID:12932); asthma (Disease Ontology:DOID:2841); carotid artery disease (Disease Ontology:DOID:3407); myocardial infarction (Disease Ontology:DOID:5844); congestive heart failure (Disease Ontology:DOID:6000); pulmonary hypertension (Disease Ontology:DOID:6432); diabetic retinopathy (Disease Ontology:DOID:8947); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:402853); (R-DRE-375276); (R-DRE-416476)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "18403048;33858671", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY253851.1, EH591372.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY253851.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Adolescent Idiopathic Scoliosis: Fishy Tales of Crooked Spines., [RefSeq, PubMed]; Results describe the distribution of urotensin I, UIIalpha and UIIbeta mRNAs in different organs and the cellular localization of the three mRNAs in the spinal cord by in situ hybridization (ISH) histochemistry., [RefSeq, PubMed]; Urotensin is found in the teleost caudal neurosecretory system. It has a suggested role in osmoregulation and as a corticotropin-releasing factor (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 13, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0008217 regulation of blood pressure;GO:0097746 blood vessel diameter maintenance", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q7ZZY8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q801V3-1", "uniprot_id": "Q801V3_DANRE", "mass": 47626.0, "length": 436, "protein_name": "Antizyme inhibitor 1b", "gene_name": "azin1b", "organism": "Zebrafish", "refseq_name": "antizyme inhibitor 1b", "refseq_ac": "NP_001007160", "gene_names_uniprotkb": "azin1b; azin1; oazin; wu:fj32d12", "gene_names_refseq": "azin1b; azin1; oazin; wu:fj32d12", "protein_names_uniprotkb": "Antizyme inhibitor 1b", "protein_names_refseq": "antizyme inhibitor 1b; antizyme inhibitor 1; ornithine decarboxylase antizyme inhibitor", "tax_id": 7955, "disease": "pneumocystosis (Disease Ontology:DOID:11339); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); liver cirrhosis (Disease Ontology:DOID:5082); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (R-DRE-350562)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "12393184;18086703;18339436;19159490;19439512;27189481;28838034;36670152", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003846.1, SRR32588726.34496415.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from JBMGRA010000019.1. On or before Jul 2, 2025 this sequence version replaced XP_073786657.1, NP_001007160.2. The protein encoded by this gene belongs to the antizyme inhibitor family, which plays a role in cell growth and proliferation by maintaining polyamine homeostasis within the cell. Antizyme inhibitors are homologs of ornithine decarboxylase (ODC, the key enzyme in polyamine biosynthesis) that have lost the ability to decarboxylase ornithine; however, retain the ability to bind to antizymes. Antizymes negatively regulate intracellular polyamine levels by binding to ODC and targeting it for degradation, as well as by inhibiting polyamine uptake. Antizyme inhibitors function as positive regulators of polyamine levels by sequestering antizymes and neutralizing their effect. This gene encodes one of two copies of antizyme inhibitor 1 in zebrafish. It is expressed in embryos and adult fish and may have a role in zebrafish development. [provided by RefSeq, May 2015]. Sequence Note:., [RefSeq]; Catalyzes the first and rate-limiting step of polyamine biosynthesis that converts ornithine into putrescine, which is the precursor for the polyamines, spermidine and spermine. Polyamines are essential for cell proliferation and are implicated in cellular processes, ranging from DNA replication to apoptosis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N338", "ec_number_list": "", "go_molecular_function": "GO:0004586 ornithine decarboxylase activity;GO:0042978 ornithine decarboxylase activator activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0042177 negative regulation of protein catabolic process;GO:0033387 putrescine biosynthetic process from arginine, via ornithine;GO:1902269 positive regulation of polyamine transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q801V3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q801W2-1", "uniprot_id": "Q801W2_DANRE", "mass": 81741.0, "length": 725, "protein_name": "ABC-type antigen peptide transporter", "gene_name": "tap2a", "organism": "Zebrafish", "refseq_name": "antigen peptide transporter 2a", "refseq_ac": "NP_001006594", "gene_names_uniprotkb": "tap2a; TAP2; abcb3l1; abcb3; si:dz179b20.1; si:dz262K18.3", "gene_names_refseq": "TAP2; abcb3l1; abcb3; si:dz179b20.1; si:dz262K18.3; tap2a", "protein_names_uniprotkb": "ABC-type antigen peptide transporter; 7.4.2.14", "protein_names_refseq": "ATP-binding cassette, sub-family B (MDR/TAP), member 3 like 1; TAP; antigen peptide transporter 2a", "tax_id": 7955, "disease": "lymphoproliferative syndrome (Disease Ontology:DOID:0060704); aspirin-induced respiratory disease (Disease Ontology:DOID:0080822); tuberculoid leprosy (Disease Ontology:DOID:1025); Alzheimer's disease (Disease Ontology:DOID:10652); dengue hemorrhagic fever (Disease Ontology:DOID:12206); limited scleroderma (Disease Ontology:DOID:1577); diffuse scleroderma (Disease Ontology:DOID:1580); multiple sclerosis (Disease Ontology:DOID:2377); cervix carcinoma (Disease Ontology:DOID:2893); pulmonary tuberculosis (Disease Ontology:DOID:2957); allergic contact dermatitis (Disease Ontology:DOID:3042); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); cervical cancer (Disease Ontology:DOID:4362); reactive arthritis (Disease Ontology:DOID:6196); ankylosing spondylitis (Disease Ontology:DOID:7147); rheumatoid arthritis (Disease Ontology:DOID:7148); psoriasis (Disease Ontology:DOID:8893); systemic lupus erythematosus (Disease Ontology:DOID:9074); type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": " (dre:368771); (R-DRE-983170)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "16124856;16799861;19146232;21315451;21346254;27539703;27734548;28694436;29027256;29471808", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163447.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL672164.13. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 19, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "7.4.2.14", "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity;GO:0015440 ABC-type peptide transporter activity;GO:0015433 ABC-type peptide antigen transporter activity", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0016020 membrane;GO:0042824 MHC class I peptide loading complex", "go_biological_process": "GO:0015031 protein transport;GO:0055085 transmembrane transport;GO:0046686 response to cadmium ion;GO:0002250 adaptive immune response", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q801W2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q802D3-1", "uniprot_id": "XPO4_DANRE", "mass": 129227.0, "length": 1150, "protein_name": "Exportin-4", "gene_name": "xpo4", "organism": "Zebrafish", "refseq_name": "exportin-4", "refseq_ac": "NP_997839", "gene_names_uniprotkb": "xpo4; fc26b07; wu:fc26b07; wu:fi43b10; zgc:55678", "gene_names_refseq": "fc26b07; wu:fc26b07; wu:fi43b10; xpo4; zgc:55678", "protein_names_uniprotkb": "Exportin-4", "protein_names_refseq": "exportin-4", "tax_id": 7955, "disease": "", "pathway": " (dre:324342)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC048882.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505372, SAMEA3505391 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC048882.1., [RefSeq]; Mediates the nuclear export of proteins (cargos) with broad substrate specificity., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005049 nuclear export signal receptor activity", "go_cellular_component": "GO:0005643 nuclear pore;GO:0005737 cytoplasm", "go_biological_process": "GO:0006611 protein export from nucleus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q802D3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q802F3-1", "uniprot_id": "SEP15_DANRE", "mass": 17223.0, "length": 153, "protein_name": "Selenoprotein F", "gene_name": "selenof", "organism": "Zebrafish", "refseq_name": "selenoprotein F precursor", "refseq_ac": "NP_840079", "gene_names_uniprotkb": "selenof; cb29; sep15; zgc:86882", "gene_names_refseq": "cb29; selenof; sep15; si:dkey-43b14.10; zgc:86882", "protein_names_uniprotkb": "Selenoprotein F; 15 kDa selenoprotein", "protein_names_refseq": "15 kDa selenoprotein; selenoprotein 15; selenoprotein F precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:352923)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12915322", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003959.1, BC071511.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## protein contains selenocysteine :: inferred from conservation ##RefSeq-Attributes-END## REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from EH553008.1 and EH535677.1. The protein encoded by this gene belongs to the SEP15/selenoprotein M family. The exact function of this protein is not known; however, it has been found to associate with UDP-glucose:glycoprotein glucosyltransferase (UGTR), an endoplasmic reticulum(ER)-resident protein, which is involved in the quality control of protein folding. The association with UGTR retains this protein in the ER, where it may play a role in protein folding. This protein is a selenoprotein, containing the rare amino acid selenocysteine (Sec). Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. [provided by RefSeq, Nov 2016]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; May be involved in redox reactions associated with the formation of disulfide bonds. May contribute to the quality control of protein folding in the endoplasmic reticulum (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6IQ99", "ec_number_list": "", "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0008430 selenium binding", "go_cellular_component": "GO:0005788 endoplasmic reticulum lumen", "go_biological_process": "GO:0051084 'de novo' post-translational protein folding", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q802F3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q802W4-1", "uniprot_id": "NOL10_DANRE", "mass": 83581.0, "length": 722, "protein_name": "Nucleolar protein 10", "gene_name": "nol10", "organism": "Zebrafish", "refseq_name": "nucleolar protein 10", "refseq_ac": "NP_956531", "gene_names_uniprotkb": "nol10; zgc:55626", "gene_names_refseq": "fa05d07; flj14075; nol10; wu:fa05d07; zgc:55626", "protein_names_uniprotkb": "Nucleolar protein 10", "protein_names_refseq": "nucleolar protein 10", "tax_id": 7955, "disease": "", "pathway": " (dre:393206)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC047174.1, AY391425.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC047174.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6TNU2", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus;GO:0032040 small-subunit processome", "go_biological_process": "GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q802W4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803A6-1", "uniprot_id": "MCMBP_DANRE", "mass": 71062.0, "length": 631, "protein_name": "Mini-chromosome maintenance complex-binding protein", "gene_name": "mcmbp", "organism": "Zebrafish", "refseq_name": "mini-chromosome maintenance complex-binding protein", "refseq_ac": "NP_997743", "gene_names_uniprotkb": "mcmbp; MCM-BP; c10orf119; cb136; sb:cb136; si:dkey-192p21.2; wu:fi19h07; zgc:55981", "gene_names_refseq": "MCM-BP; c10orf119; cb136; mcmbp; sb:cb136; wu:fi19h07; zgc:55981", "protein_names_uniprotkb": "Mini-chromosome maintenance complex-binding protein; MCM-BP; MCM-binding protein", "protein_names_refseq": "MCM-binding protein; mini-chromosome maintenance complex-binding protein", "tax_id": 7955, "disease": "", "pathway": " (dre:321119)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044562.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044562.1., [RefSeq]; Associated component of the mcm complex that acts as a regulator of DNA replication. Binds to the MCM complex during late S phase and promotes the disassembly of the mcm complex from chromatin, thereby acting as a key regulator of pre-replication complex (pre-RC) unloading from replicated DNA. Can dissociate the mcm complex without addition of ATP; probably acts by destabilizing interactions of each individual subunits of the mcm complex. Required for sister chromatid cohesion (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8E7D0", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0051301 cell division;GO:0007062 sister chromatid cohesion;GO:0006261 DNA-templated DNA replication", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q803A6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803E0-1", "uniprot_id": "PALD_DANRE", "mass": 98885.0, "length": 860, "protein_name": "Paladin", "gene_name": "pald1", "organism": "Zebrafish", "refseq_name": "paladin", "refseq_ac": "NP_942106", "gene_names_uniprotkb": "pald1; pald", "gene_names_refseq": "cb942; pald1a; pald1; pald; sb:cb559", "protein_names_uniprotkb": "Paladin", "protein_names_refseq": "paladin", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044521.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044521.1. On Jul 6, 2005 this sequence version replaced XP_701116.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6NY33", "ec_number_list": "", "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0001525 angiogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803E0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803F5-1", "uniprot_id": "APMAP_DANRE", "mass": 46744.0, "length": 415, "protein_name": "Adipocyte plasma membrane-associated protein", "gene_name": "apmap", "organism": "Zebrafish", "refseq_name": "adipocyte plasma membrane-associated protein", "refseq_ac": "NP_997773", "gene_names_uniprotkb": "apmap; bscv; zgc:55833; zgc:85628", "gene_names_refseq": "apmap; bscv; cb351; wu:fb50a03; zgc:55833; zgc:85628", "protein_names_uniprotkb": "Adipocyte plasma membrane-associated protein", "protein_names_refseq": "adipocyte plasma membrane-associated protein; bscv (C20orf3) homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:266637)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044505.1, BC067549.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044505.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q6NWL2", "ec_number_list": "", "go_molecular_function": "GO:0004064 arylesterase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803F5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803K4-1", "uniprot_id": "SETD6_DANRE", "mass": 53007.0, "length": 460, "protein_name": "N-lysine methyltransferase setd6", "gene_name": "setd6", "organism": "Zebrafish", "refseq_name": "N-lysine methyltransferase setd6", "refseq_ac": "NP_955894", "gene_names_uniprotkb": "setd6; zgc:55627", "gene_names_refseq": "setd6; wu:fb58f11; zgc:55627", "protein_names_uniprotkb": "N-lysine methyltransferase setd6; 2.1.1.-; SET domain-containing protein 6", "protein_names_refseq": "N-lysine methyltransferase setd6; SET domain-containing protein 6", "tax_id": 7955, "disease": "", "pathway": " (dre:322348)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044440.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044440.1. Sequence Note: This sequence has been modified as follows: removed 16 bp suspected to be vector contamination from the 5' end., [RefSeq]; Protein-lysine N-methyltransferase., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0016279 protein-lysine N-methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0050727 regulation of inflammatory response;GO:0018026 peptidyl-lysine monomethylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803K4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803M0-1", "uniprot_id": "PPR3B_DANRE", "mass": 33712.0, "length": 293, "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "organism": "Zebrafish", "refseq_name": "protein phosphatase 1 regulatory subunit 3B", "refseq_ac": "NP_997874", "gene_names_uniprotkb": "ppp1r3b; wu:fd20c10; wu:fi66d07; zgc:55542", "gene_names_refseq": "ppp1r3b; wu:fd20c10; wu:fi66d07; zgc:55542", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 3B", "protein_names_refseq": "protein phosphatase 1 regulatory subunit 3B; protein phosphatase 1, regulatory (inhibitor) subunit 3B", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:327285)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044421.1, BC162937.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044421.1., [RefSeq]; Acts as a glycogen-targeting subunit for phosphatase PP1. Facilitates interaction of the PP1 with enzymes of the glycogen metabolism and regulates its activity. Suppresses the rate at which PP1 dephosphorylates (inactivates) glycogen phosphorylase and enhances the rate at which it activates glycogen synthase and therefore limits glycogen breakdown (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0019888 protein phosphatase regulator activity;GO:0008157 protein phosphatase 1 binding;GO:2001069 glycogen binding", "go_cellular_component": "GO:0000164 protein phosphatase type 1 complex", "go_biological_process": "GO:0005981 regulation of glycogen catabolic process;GO:0005977 glycogen metabolic process;GO:0005979 regulation of glycogen biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803M0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803M3-1", "uniprot_id": "TEX10_DANRE", "mass": 104018.0, "length": 933, "protein_name": "Testis-expressed protein 10 homolog", "gene_name": "tex10", "organism": "Zebrafish", "refseq_name": "testis-expressed protein 10 homolog", "refseq_ac": "NP_997870", "gene_names_uniprotkb": "tex10; wu:fd16d03; wu:fj02c12; zgc:55523", "gene_names_refseq": "tex10; wu:fd16d03; wu:fj02c12; zgc:55523", "protein_names_uniprotkb": "Testis-expressed protein 10 homolog", "protein_names_refseq": "testis expressed gene 10; testis-expressed protein 10 homolog; testis-expressed sequence 10 protein homolog", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-6791226)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044417.1, AY577001.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044417.1. On Jul 6, 2005 this sequence version replaced XP_702564.1., [RefSeq]; Component of the PELP1 complex involved in the nucleolar steps of 28S rRNA maturation and the subsequent nucleoplasmic transit of the pre-60S ribosomal subunit., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PUR4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0071339 MLL1 complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q803M3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803M5-1", "uniprot_id": "SAAL1_DANRE", "mass": 51205.0, "length": 469, "protein_name": "Protein saal1", "gene_name": "saal1", "organism": "Zebrafish", "refseq_name": "protein saal1", "refseq_ac": "NP_956429", "gene_names_uniprotkb": "saal1; zgc:55505", "gene_names_refseq": "saal1; zgc:55505", "protein_names_uniprotkb": "Protein saal1", "protein_names_refseq": "protein saal1", "tax_id": 7955, "disease": "", "pathway": " (dre:393104)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044415.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC044415.1 and CT654735.2. On Feb 12, 2008 this sequence version replaced NP_956429.1., [RefSeq]; Plays a role in promoting cell proliferation in response to pro-inflammatory stimuli., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "GO:1901647 positive regulation of synoviocyte proliferation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803M5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803N9-1", "uniprot_id": "5MP2B_DANRE", "mass": 48119.0, "length": 418, "protein_name": "eIF5-mimic protein 2-B", "gene_name": "bzw1b", "organism": "Zebrafish", "refseq_name": "eIF5-mimic protein 2-B", "refseq_ac": "NP_998257", "gene_names_uniprotkb": "bzw1b; 5mp2b; bzw1l; zgc:110545; zgc:55457; zgc:76909", "gene_names_refseq": "bzw1b; bzw1l; ik:tdsubc_1g3; wu:fb19e02; xx:tdsubc_1g3; zgc:110545; zgc:55457; zgc:76909", "protein_names_uniprotkb": "eIF5-mimic protein 2-B; Basic leucine zipper and W2 domain-containing protein 1-B", "protein_names_refseq": "basic leucine zipper and W2 domain-containing protein 1-B; basic leucine zipper and W2 domains 1, like; eIF5-mimic protein 2-B", "tax_id": 7955, "disease": "", "pathway": " (dre:406812)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01002918.1, BC044401.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On or before Jul 21, 2025 this sequence version replaced XP_005167447.1, NP_998656.1., [RefSeq]; Translation initiation regulator which may repress repeat-associated non-AUG (RAN) initiated translation probably by acting as a competitive inhibitor of eukaryotic translation initiation factor 5 (EIF5) function (By similarity). Enhances histone H4 gene transcription but does not seem to bind DNA directly (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q58ED0;Q6NYN0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006446 regulation of translational initiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803N9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803R7-1", "uniprot_id": "CRNL1_DANRE", "mass": 90728.0, "length": 753, "protein_name": "Crooked neck-like protein 1", "gene_name": "crnkl1", "organism": "Zebrafish", "refseq_name": "crooked neck-like protein 1", "refseq_ac": "NP_957240", "gene_names_uniprotkb": "crnkl1; zgc:55327", "gene_names_refseq": "crnkl1; zgc:55327", "protein_names_uniprotkb": "Crooked neck-like protein 1; Crooked neck pre-mRNA splicing factor 1", "protein_names_refseq": "crooked neck pre-mRNA splicing factor-like 1; crooked neck-like protein 1", "tax_id": 7955, "disease": "basal cell carcinoma (Disease Ontology:DOID:2513)", "pathway": " (dre:393920); (R-DRE-72163)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "23594743;40857589", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044369.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044369.1., [RefSeq]; Involved in pre-mRNA splicing process. As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFB6;E7FGM7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0016607 nuclear speck;GO:0071014 post-mRNA release spliceosomal complex;GO:0071007 U2-type catalytic step 2 spliceosome;GO:0000974 Prp19 complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome;GO:0000245 spliceosomal complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q803R7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803S3-1", "uniprot_id": "MEMO1_DANRE", "mass": 33403.0, "length": 297, "protein_name": "Protein MEMO1", "gene_name": "memo1", "organism": "Zebrafish", "refseq_name": "protein MEMO1", "refseq_ac": "NP_956088", "gene_names_uniprotkb": "memo1; zgc:55290", "gene_names_refseq": "fi04d12; memo1; wu:fi04d12; zgc:55290", "protein_names_uniprotkb": "Protein MEMO1; Mediator of ErbB2-driven cell motility 1; Memo-1", "protein_names_refseq": "C21orf19-like protein; mediator of ErbB2-driven cell motility 1; memo-1; protein MEMO1; protein memo", "tax_id": 7955, "disease": "", "pathway": " (dre:327360); (R-DRE-6785631)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044360.1, BC155284.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505386, SAMEA3505393 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044360.1., [RefSeq]; May control cell migration by relaying extracellular chemotactic signals to the microtubule cytoskeleton. Mediator of ERBB2 signaling (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803S3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q803Z2-1", "uniprot_id": "YIPF3_DANRE", "mass": 37858.0, "length": 344, "protein_name": "Protein YIPF3", "gene_name": "yipf3", "organism": "Zebrafish", "refseq_name": "protein YIPF3", "refseq_ac": "NP_956201", "gene_names_uniprotkb": "yipf3; zgc:55279", "gene_names_refseq": "fj97f06; wu:fj97f06; yipf3; zgc:55279", "protein_names_uniprotkb": "Protein YIPF3; YIP1 family member 3", "protein_names_refseq": "YIP1 family member 3; protein YIPF3", "tax_id": 7955, "disease": "", "pathway": " (dre:334511)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044136.1, BC164802.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044136.1., [RefSeq]; Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005886 plasma membrane", "go_biological_process": "GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q803Z2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q804W2-1", "uniprot_id": "PRV7_DANRE", "mass": 12029.0, "length": 109, "protein_name": "Parvalbumin-7", "gene_name": "pvalb7", "organism": "Zebrafish", "refseq_name": "parvalbumin-7", "refseq_ac": "NP_991137", "gene_names_uniprotkb": "pvalb7; pvalb; zgc:92782", "gene_names_refseq": "pvalb7; pvalb; zgc:92782", "protein_names_uniprotkb": "Parvalbumin-7; Parvalbumin alpha; Parvalbumin-4a", "protein_names_refseq": "parvalbumin alpha; parvalbumin-4a; parvalbumin-7", "tax_id": 7955, "disease": "", "pathway": " (dre:402807)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076256.1, EH442457.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076256.1. On Feb 4, 2007 this sequence version replaced NP_991137.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; In muscle, parvalbumin is thought to be involved in relaxation after contraction. It binds two calcium ions (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DGT3", "ec_number_list": "", "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q804W2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8AW56-1", "uniprot_id": "Q8AW56_DANRE", "mass": 60351.0, "length": 553, "protein_name": "Cochlin", "gene_name": "coch", "organism": "Zebrafish", "refseq_name": "cochlin precursor", "refseq_ac": "NP_001003823", "gene_names_uniprotkb": "coch; si:dz234g15.4", "gene_names_refseq": "coch; si:dz234g15.4", "protein_names_uniprotkb": "Cochlin", "protein_names_refseq": "cochlin precursor; cochlin", "tax_id": 7955, "disease": "autosomal dominant nonsyndromic deafness 9 (Disease Ontology:DOID:0110593); autosomal recessive nonsyndromic deafness 110 (Disease Ontology:DOID:0111644)", "pathway": "", "pathway_count": 0, "publication_count": 7, "publication_id_list": "22140076;24611545;26048245;26469318;34244442;35127702;35864190", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC162181.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL596026.13., [RefSeq]; Ciliopathy genes are required for apical secretion of Cochlin, an otolith crystallization factor., [RefSeq, PubMed]; Plays a role in the control of cell shape and motility in the trabecular meshwork., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0031012 extracellular matrix", "go_biological_process": "GO:0007605 sensory perception of sound", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8AW56-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8AWY2-1", "uniprot_id": "HXAAB_DANRE", "mass": 36947.0, "length": 330, "protein_name": "Homeobox protein Hox-A10b", "gene_name": "hoxa10b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "hoxa10b; Hoxa-10; hoxa10; z-140", "gene_names_refseq": "", "protein_names_uniprotkb": "Homeobox protein Hox-A10b; Hox-A10", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:30391)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16174031;23594743;9425136", "class_list": "", "function": "Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O57357;Q4PRA5", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q8AWY2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8AWY9-1", "uniprot_id": "HXB7A_DANRE", "mass": 25614.0, "length": 227, "protein_name": "Homeobox protein Hox-B7a", "gene_name": "hoxb7a", "organism": "Zebrafish", "refseq_name": "homeobox protein Hox-B7a", "refseq_ac": "NP_001108563", "gene_names_uniprotkb": "hoxb7a; fc39g02; hoxb7; wu:fc39g02; z-139", "gene_names_refseq": "fc39g02; hoxb7a; hoxb7; wu:fc39g02; z-139", "protein_names_uniprotkb": "Homeobox protein Hox-B7a; Hox-B7", "protein_names_refseq": "homeo box B7a; homeobox gene B-7; homeobox protein Hox-B7a; hox-B7", "tax_id": 7955, "disease": "invasive ductal carcinoma (Disease Ontology:DOID:3008); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); lung adenocarcinoma (Disease Ontology:DOID:3910)", "pathway": " (dre:58044)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16174031;23594743;9425136", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163361.1, GFIL01012803.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC163361.1 and JBMGRA010000003.1. On Mar 4, 2008 this sequence version replaced XP_688193.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O57362;Q4PRA1", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0009952 anterior/posterior pattern specification", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q8AWY9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8JFB7-1", "uniprot_id": "ORML1_DANRE", "mass": 17379.0, "length": 153, "protein_name": "ORM1-like protein 1", "gene_name": "ormdl1", "organism": "Zebrafish", "refseq_name": "ORM1-like protein 1", "refseq_ac": "NP_956387", "gene_names_uniprotkb": "ormdl1; dZ72B14.3; si:busm1-72b14.3; si:dz72b14.3; zgc:73159", "gene_names_refseq": "dZ72B14.3; ormdl1; si:busm1-72b14.3; si:dz72b14.3; zgc:73159", "protein_names_uniprotkb": "ORM1-like protein 1", "protein_names_refseq": "ORM1-like 1; ORM1-like protein 1", "tax_id": 7955, "disease": "asthma (Disease Ontology:DOID:2841)", "pathway": " (dre:368632); (R-DRE-1660661)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH451240.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059514.1., [RefSeq]; Plays an essential role in the homeostatic regulation of sphingolipid de novo biosynthesis by modulating the activity of the serine palmitoyltransferase (SPT) in response to ceramide levels (By similarity). When complexed to SPT, the binding of ceramides to its N-terminus stabilizes a conformation that block SPT substrate entry, hence preventing SPT catalytic activity. Through this mechanism, maintains ceramide levels at sufficient concentrations for the production of complex sphingolipids, but which prevents the accumulation of ceramides to levels that trigger apoptosis (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0017059 serine palmitoyltransferase complex;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:2000303 regulation of ceramide biosynthetic process;GO:0030148 sphingolipid biosynthetic process;GO:0006672 ceramide metabolic process;GO:0090156 intracellular sphingolipid homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q8JFB7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8JFT7-1", "uniprot_id": "Q8JFT7_DANRE", "mass": 57648.0, "length": 520, "protein_name": "Importin subunit alpha", "gene_name": "kpna3", "organism": "Zebrafish", "refseq_name": "importin subunit alpha-4", "refseq_ac": "NP_958477", "gene_names_uniprotkb": "kpna3; si:dz79f24.2", "gene_names_refseq": "kpna3; si:dz79f24.2", "protein_names_uniprotkb": "Importin subunit alpha", "protein_names_refseq": "importin subunit alpha-4; karyopherin (importin) alpha 3", "tax_id": 7955, "disease": "hereditary spastic paraplegia 88 (Disease Ontology:DOID:0070457)", "pathway": " (dre:368640)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15520368;16109975;17488487;26469318;26553237;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC055253.1, GDQH01003377.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH492862.1, JBMGRA010000001.1 and EH519194.1. On Sep 27, 2011 this sequence version replaced NP_958477.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7V051", "ec_number_list": "", "go_molecular_function": "GO:0008139 nuclear localization sequence binding;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0042564 NLS-dependent protein nuclear import complex", "go_biological_process": "GO:0048513 animal organ development;GO:0006607 NLS-bearing protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8JFT7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8JFV4-1", "uniprot_id": "HTR5A_DANRE", "mass": 216705.0, "length": 1998, "protein_name": "HEAT repeat-containing protein 5A", "gene_name": "heatr5a", "organism": "Zebrafish", "refseq_name": "HEAT repeat-containing protein 5A", "refseq_ac": "NP_956772", "gene_names_uniprotkb": "heatr5a; CG2747; si:busm1-142b24.3; si:dz142b24.3; zgc:63665", "gene_names_refseq": "CG2747; heatr5a; si:busm1-142b24.3; si:dz142b24.3; zgc:63665", "protein_names_uniprotkb": "HEAT repeat-containing protein 5A", "protein_names_refseq": "HEAT repeat-containing protein 5A", "tax_id": 7955, "disease": "", "pathway": " (dre:368728)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA4476738, SAMEA4476752 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL593845.5. On Jul 30, 2004 this sequence version replaced NP_956772.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q7SXY8", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0030139 endocytic vesicle", "go_biological_process": "GO:0006897 endocytosis;GO:0008104 intracellular protein localization;GO:0042147 retrograde transport, endosome to Golgi", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q8JFV4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8JFV8-1", "uniprot_id": "VAT1_DANRE", "mass": 53563.0, "length": 484, "protein_name": "NADPH-dependent quinone oxidoreductase VAT1", "gene_name": "vat1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "vat1; si:dz163l24.2", "gene_names_refseq": "", "protein_names_uniprotkb": "NADPH-dependent quinone oxidoreductase VAT1; 1.6.5.5; Synaptic vesicle membrane protein VAT-1 homolog; VAT-1; Vesicle amine transport 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-6798695)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15533823;23594743", "class_list": "", "function": "Multifunctional protein with enzymatic and transport activities. Probable NADPH-dependent quinone oxidoreductase which physiological substrates and function are unclear. Alternatively, has also been suggested to mediate the transfer of negatively charged phospholipids including phosphatidic acid (PA), phosphatidylserine (PS) and phosphatidylglycerol (PG) between endoplasmic reticulum and mitochondrial membranes. Could regulate mitochondrial fusion., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q5SF06;Q6NYU0", "ec_number_list": "3.4.21.4;2.4.1.1;3.1.27.-;1.6.5.5;4.6.1.19;3.5.3.1;3.2.1.-;3.2.1.31;5.3.4.1;3.1.6.4;3.5.4.4;3.1.3.16;1.1.1.205;6.3.4.21;3.6.4.6;5.3.99.3", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003960 quinone reductase (NADPH) activity;GO:0008753 NADPH dehydrogenase (quinone) activity", "go_cellular_component": "GO:0005741 mitochondrial outer membrane;GO:0005829 cytosol", "go_biological_process": "GO:0006869 lipid transport;GO:0010637 negative regulation of mitochondrial fusion", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q8JFV8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8JFW1-1", "uniprot_id": "ASND1_DANRE", "mass": 68298.0, "length": 612, "protein_name": "Asparagine synthetase domain-containing protein 1", "gene_name": "asnsd1", "organism": "Zebrafish", "refseq_name": "asparagine synthetase domain-containing protein 1", "refseq_ac": "NP_956389", "gene_names_uniprotkb": "asnsd1; si:dz211o13.6", "gene_names_refseq": "asnsd1; si:busm1-211o13.6; si:dz211o13.6; zgc:56584", "protein_names_uniprotkb": "Asparagine synthetase domain-containing protein 1", "protein_names_refseq": "asparagine synthetase domain-containing protein 1", "tax_id": 7955, "disease": "myopathy (Disease Ontology:DOID:423)", "pathway": " (dre:368827)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588723.2428300.1, SRR32588732.31857909.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On or before Jul 19, 2017 this sequence version replaced XP_017213149.1, NP_956389.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7ZTT7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0070981 L-asparagine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q8JFW1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8JFW4-1", "uniprot_id": "ADAT3_DANRE", "mass": 37683.0, "length": 336, "protein_name": "tRNA-specific adenosine-34 deaminase regulatory subunit adat3", "gene_name": "adat3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "adat3; si:busm1-72b14.5; si:dkey-204g5.2; si:dz72b14.5; zgc:103555", "gene_names_refseq": "", "protein_names_uniprotkb": "tRNA-specific adenosine-34 deaminase regulatory subunit adat3", "protein_names_refseq": "", "tax_id": 7955, "disease": "neurodevelopmental disorder with brain abnormalities, poor growth, and dysmorphic facies (Disease Ontology:DOID:0081099)", "pathway": " (dre:368634)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;27189481", "class_list": "", "function": "Non-catalytic subunit of the tRNA-specific adenosine-34 deaminase complex, composed of the ADAT2 catalytic subunit and the ADAT3 regulatory subunit, which deaminates adenosine-34 (the first, also called wobble position of the anticodon) to inosine in many tRNAs. Inosine-34 allows the decoding of 3 different nucleotides at the third position of mRNA codons, as inosine is able to pair with U, C, and A. Required for binding of the ADAT2-ADAT3 complex to tRNA through its N-terminus, which rotates with respect to the catalytic domain of the complex, formed by ADAT2 and the ADAT3 C-terminal domain, to position the tRNA anticodon stem-loop correctly in the ADAT2 active site., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0V342;Q8JFR8", "ec_number_list": "", "go_molecular_function": "GO:0046872 metal ion binding;GO:0003824 catalytic activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0008033 tRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q8JFW4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8JHI6-1", "uniprot_id": "MED29_DANRE", "mass": 19705.0, "length": 179, "protein_name": "Mediator of RNA polymerase II transcription subunit 29", "gene_name": "med29", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 29", "refseq_ac": "NP_775378", "gene_names_uniprotkb": "med29; ixl", "gene_names_refseq": "chunp6869; ixl; med29; zgc:109789", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29", "protein_names_refseq": "intersex-like protein; mediator of RNA polymerase II transcription subunit 29", "tax_id": 7955, "disease": "", "pathway": " (dre:797134)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12006978", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH541499.1, EH562650.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Dec 19, 2007 this sequence version replaced XP_001334603.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0021680 cerebellar Purkinje cell layer development;GO:0042462 eye photoreceptor cell development;GO:0001966 thigmotaxis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q8JHI6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q8QHJ8-1", "uniprot_id": "XPO6_DANRE", "mass": 128396.0, "length": 1128, "protein_name": "Exportin-6", "gene_name": "xpo6", "organism": "Zebrafish", "refseq_name": "exportin-6", "refseq_ac": "NP_919355", "gene_names_uniprotkb": "xpo6; Ranbp20; fi24f12; wu:fi24f12", "gene_names_refseq": "Ranbp20; fi24f12; wu:fi24f12; xpo6", "protein_names_uniprotkb": "Exportin-6; Exp6", "protein_names_refseq": "exp6; exportin-6", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "14592989;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AF395741.1, BC044132.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF395741.1. On Nov 16, 2007 this sequence version replaced XP_001345139.1., [RefSeq]; Mediates the nuclear export of actin and profilin-actin complexes in somatic cells., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0031267 small GTPase binding;GO:0005049 nuclear export signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006611 protein export from nucleus", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8QHJ8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1IH00-1", "uniprot_id": "GOGA2_DANRE", "mass": 117774.0, "length": 1028, "protein_name": "Golgin subfamily A member 2", "gene_name": "golga2", "organism": "Zebrafish", "refseq_name": "golgin subfamily A member 2", "refseq_ac": "NP_001120806", "gene_names_uniprotkb": "golga2; drgm130; si:dkey-246l19.1", "gene_names_refseq": "drgm130; golga2; si:dkey-246l19.1", "protein_names_uniprotkb": "Golgin subfamily A member 2; Golgin A2; cis-Golgi matrix protein GM130", "protein_names_refseq": "cis-Golgi matrix protein GM130; golgi autoantigen, golgin subfamily a, 2; golgin subfamily A member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:565431); (R-DRE-162658); (R-DRE-6807878); (R-DRE-9013148)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "23594743;26742501", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AB245440.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB245440.1. On Jul 31, 2008 this sequence version replaced XP_693722.3., [RefSeq]; Knockdown of golga2 in zebrafish resulted in severe skeletal muscle disorganization and microcephaly recapitulating loss of function human phenotype., [RefSeq, PubMed]; Peripheral membrane component of the cis-Golgi stack that acts as a membrane skeleton that maintains the structure of the Golgi apparatus, and as a vesicle thether that facilitates vesicle fusion to the Golgi membrane (By similarity). Required for normal protein transport from the endoplasmic reticulum to the Golgi apparatus and the cell membrane (By similarity). Plays a central role in mitotic Golgi disassembly (By similarity). Also plays a key role in spindle pole assembly and centrosome organization. It probably promotes mitotic spindle pole assembly by activating assembly factors to nucleate microtubules around the Golgi and capture them to couple mitotic membranes to the spindle (By similarity). Also required for the Golgi ribbon formation and glycosylation of membrane and secretory proteins (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NGZ4", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0000922 spindle pole;GO:0005874 microtubule;GO:0032580 Golgi cisterna membrane;GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane;GO:0005801 cis-Golgi network", "go_biological_process": "GO:0015031 protein transport;GO:0051301 cell division;GO:0007420 brain development;GO:0007030 Golgi organization;GO:0007519 skeletal muscle tissue development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A1IH00-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1XQX2-1", "uniprot_id": "NR1BA_DANRE", "mass": 161208.0, "length": 1470, "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "nrxn1b", "gene_names_refseq": "", "protein_names_uniprotkb": "Neurexin-1b; Neurexin Ib-alpha; Neurexin-1b-alpha", "protein_names_refseq": "", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); Pitt-Hopkins-like syndrome 2 (Disease Ontology:DOID:0111332); transient cerebral ischemia (Disease Ontology:DOID:224); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:555686)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "17041151;23637638;24633177;25867848;26271038;27189481;32179471;34499171;35524578;36613611", "class_list": "", "function": "Neuronal cell surface protein that may be involved in cell recognition and cell adhesion., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May play a role in formation or maintenance of synaptic junctions., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0046872 metal ion binding;GO:0097109 neuroligin family protein binding", "go_cellular_component": "GO:0048787 presynaptic active zone membrane;GO:0005886 plasma membrane;GO:0098820 trans-synaptic protein complex;GO:0016020 membrane", "go_biological_process": "GO:0097116 gephyrin clustering involved in postsynaptic density assembly;GO:0007155 cell adhesion;GO:0007165 signal transduction;GO:0007399 nervous system development;GO:0007612 learning", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A1XQX2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1XQX8-1", "uniprot_id": "NR3AA_DANRE", "mass": 187194.0, "length": 1697, "protein_name": "Neurexin-3a", "gene_name": "nrxn3a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "nrxn3a; im:7144250; nrxn3aa; nrxn3ab; wu:fj54c11", "gene_names_refseq": "", "protein_names_uniprotkb": "Neurexin-3a; Neurexin IIIa-alpha; Neurexin-3a-alpha", "protein_names_refseq": "", "tax_id": 7955, "disease": "alcohol dependence (Disease Ontology:DOID:0050741); nicotine dependence (Disease Ontology:DOID:0050742); autism spectrum disorder (Disease Ontology:DOID:0060041)", "pathway": " (dre:563598); (R-DRE-6794361)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "17041151;22073277;23637638;25386660;25867848;29195096;33276371;34499171;35221915;39254120", "class_list": "", "function": "Neuronal cell surface protein that may be involved in cell recognition and cell adhesion., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A1XQX9", "ec_number_list": "", "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0046872 metal ion binding;GO:0097109 neuroligin family protein binding", "go_cellular_component": "GO:0048787 presynaptic active zone membrane;GO:0005886 plasma membrane;GO:0098820 trans-synaptic protein complex;GO:0016020 membrane", "go_biological_process": "GO:0097116 gephyrin clustering involved in postsynaptic density assembly;GO:0007155 cell adhesion;GO:0007165 signal transduction;GO:0007399 nervous system development;GO:0007612 learning", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A1XQX8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1XQX0-1", "uniprot_id": "NR1AA_DANRE", "mass": 164313.0, "length": 1491, "protein_name": "Neurexin-1a", "gene_name": "nrxn1a", "organism": "Zebrafish", "refseq_name": "neurexin 1a isoform 1 precursor", "refseq_ac": "NP_001073490", "gene_names_uniprotkb": "nrxn1a", "gene_names_refseq": "nrxn1a", "protein_names_uniprotkb": "Neurexin-1a; Neurexin Ia-alpha; Neurexin-1a-alpha", "protein_names_refseq": "neurexin 1a isoform 1 precursor; neurexin Ia-alpha; neurexin Ia-beta; neurexin-1a-alpha", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); Pitt-Hopkins-like syndrome 2 (Disease Ontology:DOID:0111332); transient cerebral ischemia (Disease Ontology:DOID:224); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:565531); (R-DRE-6794361)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "17041151;22516065", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4476737, SAMEA4476739 [ECO:0000348] ##Evidence-Data-END## REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from JBMGRA010000012.1. On or before Nov 9, 2016 this sequence version replaced XP_009304922.1, XP_685299.2. This gene encodes a single-pass type I membrane protein that belongs to the neurexin family. Neurexins are synaptic transmembrane receptors that bind endogenous ligands that include neuroligins, dystroglycan, and neurexophilins. Neurexin complexes are required for efficient neurotransmission and are involved in synaptogenesis. In vertebrates, alternate promoter usage results in multiple isoform classes, of which the alpha and beta classes are the best characterized. In humans, allelic variants in this gene are associated with Pitt-Hopkins-like syndrome-2, while deletions have been associated with autism and schizophrenia. In zebrafish, morpholino knockdown of an alpha isoform results in defects in balance and reduced locomotor activity. Knockdown of a beta isoform results in defects in sprouting angiogenesis and vascular remodeling. Alternative splicing and promoter usage result in multiple transcript variants. [provided by RefSeq, Dec 2016]. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Coinjection of low doses of morpholinos for beta-neurexin 1a and neuroligin 1 together or in combination with morpholinos targeting the -heparin--binding isoforms of vascular endothelial growth factor A recapitulates the observed abnormalities, [RefSeq, PubMed]; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]; Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May play a role in formation or maintenance of synaptic junctions., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0046872 metal ion binding;GO:0097109 neuroligin family protein binding", "go_cellular_component": "GO:0048787 presynaptic active zone membrane;GO:0005886 plasma membrane;GO:0098820 trans-synaptic protein complex;GO:0016020 membrane", "go_biological_process": "GO:0097116 gephyrin clustering involved in postsynaptic density assembly;GO:0007155 cell adhesion;GO:0007165 signal transduction;GO:0007399 nervous system development;GO:0007612 learning", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A1XQX0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A8M9QPT3-1", "uniprot_id": "A0A8M9QPT3_DANRE", "mass": 79622.0, "length": 700, "protein_name": "Double-strand break repair protein", "gene_name": "mre11a", "organism": "Zebrafish", "refseq_name": "double-strand break repair protein MRE11", "refseq_ac": "NP_001307188", "gene_names_uniprotkb": "mre11a; fc38f05; wu:faa63d12; wu:fc38f05; zgc:64018", "gene_names_refseq": "fc38f05; mre11a; wu:faa63d12; wu:fc38f05; zgc:64018", "protein_names_uniprotkb": "Double-strand break repair protein", "protein_names_refseq": "MRE11 homolog, double strand break repair nuclease A; double-strand break repair protein MRE11; meiotic recombination 11 homolog A", "tax_id": 7955, "disease": "ataxia-telangiectasia-like disorder 1 (Disease Ontology:DOID:0081384); intestinal cancer (Disease Ontology:DOID:10155); Alzheimer's disease (Disease Ontology:DOID:10652); urinary bladder cancer (Disease Ontology:DOID:11054); endometrial cancer (Disease Ontology:DOID:1380); breast cancer (Disease Ontology:DOID:1612); rectum cancer (Disease Ontology:DOID:1993); colon cancer (Disease Ontology:DOID:219); ovarian cancer (Disease Ontology:DOID:2394); malignant astrocytoma (Disease Ontology:DOID:3069); breast carcinoma (Disease Ontology:DOID:3459); liver cancer (Disease Ontology:DOID:3571); Lynch syndrome (Disease Ontology:DOID:3883); skin cancer (Disease Ontology:DOID:4159); stomach carcinoma (Disease Ontology:DOID:5517)", "pathway": " (dre:406637); (R-DRE-1834949); (R-DRE-2559586); (R-DRE-5685938); (R-DRE-5685939); (R-DRE-5685942); (R-DRE-5693537); (R-DRE-5693548); (R-DRE-5693565); (R-DRE-5693568); (R-DRE-5693571); (R-DRE-5693579); (R-DRE-5693607); (R-DRE-5693616); (R-DRE-6804756); (R-DRE-69473)", "pathway_count": 16, "publication_count": 10, "publication_id_list": "16109975;25503746;27189481;29751158;30453236;30955321;32196499;33514542;34390914;34559557", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395039.92861.1, SRR26395017.967554.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476739 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Feb 18, 2016 this sequence version replaced XP_005157432.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by transcript and RNA-seq alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Core component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis. The MRN complex is involved in the repair of DNA double-strand breaks (DSBs) via homologous recombination (HR), an error-free mechanism which primarily occurs during S and G2 phases. The complex (1) mediates the end resection of damaged DNA, which generates proper single-stranded DNA, a key initial steps in HR, and is (2) required for the recruitment of other repair factors and efficient activation of ATM and ATR upon DNA damage. Within the MRN complex, MRE11 possesses both single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. MRE11 first endonucleolytically cleaves the 5' strand at DNA DSB ends to prevent non-homologous end joining (NHEJ) and licence HR. It then generates a single-stranded DNA gap via 3' to 5' exonucleolytic degradation, which is required for single-strand invasion and recombination., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 15, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4ITV5", "ec_number_list": "", "go_molecular_function": "GO:0008296 3'-5'-DNA exonuclease activity;GO:0030145 manganese ion binding;GO:0000014 single-stranded DNA endodeoxyribonuclease activity", "go_cellular_component": "GO:0035861 site of double-strand break;GO:0030870 Mre11 complex", "go_biological_process": "GO:0032204 regulation of telomere maintenance;GO:0000723 telomere maintenance;GO:0006303 double-strand break repair via nonhomologous end joining;GO:0000724 double-strand break repair via homologous recombination;GO:0031573 mitotic intra-S DNA damage checkpoint signaling", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A0A8M9QPT3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A8N7T7A2-1", "uniprot_id": "A0A8N7T7A2_DANRE", "mass": 583713.0, "length": 5281, "protein_name": "Ras-related protein Rab-12", "gene_name": "rab44", "organism": "Zebrafish", "refseq_name": "uncharacterized protein rab44 isoform X1", "refseq_ac": "XP_073810501", "gene_names_uniprotkb": "rab44", "gene_names_refseq": "rab44", "protein_names_uniprotkb": "Ras-related protein Rab-12; 3.6.5.2", "protein_names_refseq": "uncharacterized protein rab44 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:560799)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JVJ8", "ec_number_list": "3.6.5.2;3.6.5.3;3.6.5.5;3.6.1.5;3.6.5.-;3.6.1.-;3.6.5.4", "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0003925 G protein activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005886 plasma membrane;GO:0005765 lysosomal membrane;GO:0055038 recycling endosome membrane", "go_biological_process": "GO:0015031 protein transport;GO:0006914 autophagy;GO:0006887 exocytosis;GO:0032456 endocytic recycling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8N7T7A2-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A8N7TDV6-1", "uniprot_id": "A0A8N7TDV6_DANRE", "mass": 291780.0, "length": 2538, "protein_name": "Piezo-type mechanosensitive ion channel component 1 isoform X1", "gene_name": "piezo1", "organism": "Zebrafish", "refseq_name": "piezo-type mechanosensitive ion channel component 1 isoform X1", "refseq_ac": "XP_696355", "gene_names_uniprotkb": "piezo1", "gene_names_refseq": "piezo1", "protein_names_uniprotkb": "Piezo-type mechanosensitive ion channel component 1 isoform X1", "protein_names_refseq": "piezo-type mechanosensitive ion channel component 1 isoform X1", "tax_id": 7955, "disease": "hereditary lymphedema (Disease Ontology:DOID:0050580); dehydrated hereditary stomatocytosis (Disease Ontology:DOID:0111575); dehydrated hereditary stomatocytosis 1 (Disease Ontology:DOID:0111576); distal arthrogryposis type 5 (Disease Ontology:DOID:0111608)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_696355.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0008381 mechanosensitive monoatomic ion channel activity;GO:0140135 mechanosensitive monoatomic cation channel activity;GO:0022832 voltage-gated channel activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane", "go_biological_process": "GO:0042391 regulation of membrane potential;GO:0006884 cell volume homeostasis;GO:0048873 homeostasis of number of cells within a tissue;GO:0010482 regulation of epidermal cell division;GO:0060349 bone morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8N7TDV6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A8N7TEF8-1", "uniprot_id": "A0A8N7TEF8_DANRE", "mass": 298129.0, "length": 2633, "protein_name": "Serine/threonine-protein kinase ATR", "gene_name": "atr", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase ATR", "refseq_ac": "XP_696163", "gene_names_uniprotkb": "atr", "gene_names_refseq": "atr", "protein_names_uniprotkb": "Serine/threonine-protein kinase ATR; 2.7.11.1; Ataxia telangiectasia and Rad3-related protein", "protein_names_refseq": "serine/threonine-protein kinase ATR", "tax_id": 7955, "disease": "Seckel syndrome (Disease Ontology:DOID:0050569); non-Hodgkin lymphoma (Disease Ontology:DOID:0060060); Seckel syndrome 1 (Disease Ontology:DOID:0070007); adenoid cystic carcinoma (Disease Ontology:DOID:0080202); Alzheimer's disease (Disease Ontology:DOID:10652); ataxia telangiectasia (Disease Ontology:DOID:12704); lung cancer (Disease Ontology:DOID:1324); endometrial cancer (Disease Ontology:DOID:1380); breast cancer (Disease Ontology:DOID:1612); pancreatic cancer (Disease Ontology:DOID:1793); colon cancer (Disease Ontology:DOID:219); nasopharynx carcinoma (Disease Ontology:DOID:9261)", "pathway": " (dre:567770)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_696163.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 12, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.7.11.1;2.7.11.13;2.7.11.25;2.7.10.1;2.7.11.22;2.7.11.21;2.7.11.17;2.7.12.1;2.7.12.2;2.7.11.24;2.7.10.2;2.7.11.23;2.7.1.150;2.7.11.12;2.7.11.39;2.7.11.11;2.7.1.153;2.7.1.137;2.7.1.154;2.7.11.26;2.7.11.31", "go_molecular_function": "GO:0003677 DNA binding;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005694 chromosome", "go_biological_process": "GO:0003140 determination of left/right asymmetry in lateral mesoderm;GO:0006281 DNA repair;GO:0000723 telomere maintenance;GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage;GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8N7TEF8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A8N7TF70-1", "uniprot_id": "A0A8N7TF70_DANRE", "mass": 118894.0, "length": 1061, "protein_name": "Wolframin", "gene_name": "wfs1a", "organism": "Zebrafish", "refseq_name": "wolframin", "refseq_ac": "XP_695252", "gene_names_uniprotkb": "wfs1a", "gene_names_refseq": "wfs1a", "protein_names_uniprotkb": "Wolframin", "protein_names_refseq": "wolframin", "tax_id": 7955, "disease": "nonsyndromic deafness (Disease Ontology:DOID:0050563); autosomal dominant Wolfram syndrome (Disease Ontology:DOID:0080584); cataract 41 (Disease Ontology:DOID:0110241); autosomal dominant nonsyndromic deafness 6 (Disease Ontology:DOID:0110584); Wolfram syndrome 1 (Disease Ontology:DOID:0110629); optic atrophy 1 (Disease Ontology:DOID:0111441); sensorineural hearing loss (Disease Ontology:DOID:10003); glucose intolerance (Disease Ontology:DOID:10603); Wolfram syndrome (Disease Ontology:DOID:10632); post-traumatic stress disorder (Disease Ontology:DOID:2055); optic atrophy (Disease Ontology:DOID:5723); cataract (Disease Ontology:DOID:83); diabetic retinopathy (Disease Ontology:DOID:8947); diabetes mellitus (Disease Ontology:DOID:9351); type 2 diabetes mellitus (Disease Ontology:DOID:9352); type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": " (dre:566876)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_695252.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 16, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0003407 neural retina development;GO:0048812 neuron projection morphogenesis;GO:0010842 retina layer formation;GO:0071599 otic vesicle development;GO:0030968 endoplasmic reticulum unfolded protein response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8N7TF70-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0A8N7UW23-1", "uniprot_id": "A0A8N7UW23_DANRE", "mass": 73825.0, "length": 640, "protein_name": "Tyrosine-protein kinase", "gene_name": "btk", "organism": "Zebrafish", "refseq_name": "tyrosine-protein kinase BTK", "refseq_ac": "XP_068074880", "gene_names_uniprotkb": "btk", "gene_names_refseq": "btk", "protein_names_uniprotkb": "Tyrosine-protein kinase; 2.7.10.2", "protein_names_refseq": "tyrosine-protein kinase BTK", "tax_id": 7955, "disease": "mantle cell lymphoma (Disease Ontology:DOID:0050746); isolated growth hormone deficiency type III (Disease Ontology:DOID:0060875); COVID-19 (Disease Ontology:DOID:0080600); X-linked agammaglobulinemia (Disease Ontology:DOID:14179); agammaglobulinemia (Disease Ontology:DOID:2583); central nervous system lymphoma (Disease Ontology:DOID:3234); lung adenocarcinoma (Disease Ontology:DOID:3910); B-cell lymphoma (Disease Ontology:DOID:707); Burkitt lymphoma (Disease Ontology:DOID:8584); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:568653)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_068074880.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 10, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.7.10.1;2.7.10.2;2.7.11.1;2.7.12.1;2.7.12.2", "go_molecular_function": "GO:0004715 non-membrane spanning protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0009952 anterior/posterior pattern specification;GO:0030178 negative regulation of Wnt signaling pathway;GO:0060828 regulation of canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8N7UW23-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0JMK5-1", "uniprot_id": "MTMR2_DANRE", "mass": 71109.0, "length": 620, "protein_name": "Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR2", "gene_name": "mtmr2", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR2", "refseq_ac": "NP_571446", "gene_names_uniprotkb": "mtmr2; si:dkey-110k5.3", "gene_names_refseq": "mtmr2; zgc:153915", "protein_names_uniprotkb": "Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR2; 3.1.3.95; Myotubularin-related protein 2; Phosphatidylinositol-3-phosphate phosphatase", "protein_names_refseq": "phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR2; phosphatidylinositol-3,5-bisphosphate 3-phosphatase; phosphatidylinositol-3-phosphate phosphatase", "tax_id": 7955, "disease": "Charcot-Marie-Tooth disease type 4B1 (Disease Ontology:DOID:0110191); centronuclear myopathy X-linked (Disease Ontology:DOID:0111225); Charcot-Marie-Tooth disease (Disease Ontology:DOID:10595); myopathy (Disease Ontology:DOID:423)", "pathway": " (dre:30644); (R-DRE-1483248); (R-DRE-1660516); (R-DRE-1660517)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC125912.1, BC165469.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125912.1. On Nov 9, 2006 this sequence version replaced XP_695296.1., [RefSeq]; Lipid phosphatase that specifically dephosphorylates the D-3 position of phosphatidylinositol 3-phosphate and phosphatidylinositol 3,5-bisphosphate, generating phosphatidylinositol and phosphatidylinositol 5-phosphate. Regulates the level of these phosphoinositides critical for various biological processes including autophagy initiation and autophagosome maturation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0R0X3", "ec_number_list": "3.1.3.95;3.1.3.64", "go_molecular_function": "GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity;GO:0004725 protein tyrosine phosphatase activity;GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0016020 membrane;GO:0031901 early endosome membrane", "go_biological_process": "GO:0046856 phosphatidylinositol dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0JMK5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0JMK6-1", "uniprot_id": "SCG2B_DANRE", "mass": 65921.0, "length": 583, "protein_name": "Secretogranin-2b", "gene_name": "scg2b", "organism": "Zebrafish", "refseq_name": "secretogranin-2b precursor", "refseq_ac": "NP_001071216", "gene_names_uniprotkb": "scg2b; SgIIb; zgc:153925", "gene_names_refseq": "scg2b; scg2; sgIIb; wu:fj34e01; zgc:153925", "protein_names_uniprotkb": "Secretogranin-2b; Secretogranin II b", "protein_names_refseq": "secretogranin II (chromogranin C), b; secretogranin-2b precursor; secretogranin-2b", "tax_id": 7955, "disease": "", "pathway": " (dre:777641); (R-DRE-381426); (R-DRE-8957275)", "pathway_count": 3, "publication_count": 3, "publication_id_list": "23594743;29757409;32467166", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC125913.1, CK024830.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125913.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Neuroendocrine protein of the granin family that regulates the biogenesis of secretory granules (By similarity). Required for neurovascular modeling of the hindbrain (PubMed:29757409). Acts in a non-cell autonomous manner and is required for migration and proliferation of central artery endothelial cells (PubMed:29757409). Required for normal courting behavior and spawning (PubMed:32467166)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B2GPN7", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0030141 secretory granule", "go_biological_process": "GO:0001525 angiogenesis;GO:1903670 regulation of sprouting angiogenesis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0JMK6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A0PJT0-1", "uniprot_id": "RIPL1_DANRE", "mass": 46917.0, "length": 406, "protein_name": "RILP-like protein 1", "gene_name": "rilpl1", "organism": "Zebrafish", "refseq_name": "RILP-like protein 1", "refseq_ac": "NP_001073132", "gene_names_uniprotkb": "rilpl1; wu:fj63e01; zgc:158490", "gene_names_refseq": "rilpl1; wu:fj63e01; zgc:158490", "protein_names_uniprotkb": "RILP-like protein 1; Rab-interacting lysosomal-like protein 1", "protein_names_refseq": "RILP-like protein 1; rab-interacting lysosomal-like protein 1", "tax_id": 7955, "disease": "oculopharyngodistal myopathy 4 (Disease Ontology:DOID:0081300)", "pathway": " (dre:780843)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC127600.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC127600.1. On May 1, 2009 this sequence version replaced NP_001073132.1., [RefSeq]; Plays a role in the regulation of cell shape and polarity. Plays a role in cellular protein transport, including protein transport away from primary cilia. Neuroprotective protein (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0031267 small GTPase binding;GO:0051959 dynein light intermediate chain binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005813 centrosome;GO:0005829 cytosol;GO:0005929 cilium;GO:0016020 membrane", "go_biological_process": "GO:0007263 nitric oxide mediated signal transduction;GO:0060271 cilium assembly;GO:0003382 epithelial cell morphogenesis;GO:1903445 protein transport from ciliary membrane to plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0PJT0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1A5H6-1", "uniprot_id": "CNOT1_DANRE", "mass": 266604.0, "length": 2374, "protein_name": "CCR4-NOT transcription complex subunit 1", "gene_name": "cnot1", "organism": "Zebrafish", "refseq_name": "CCR4-NOT transcription complex subunit 1", "refseq_ac": "NP_001073420", "gene_names_uniprotkb": "cnot1; zgc:152902", "gene_names_refseq": "cdc39-like; cnot1; im:7141761; kiaa1007l; wu:fc58h04; zgc:152902", "protein_names_uniprotkb": "CCR4-NOT transcription complex subunit 1; CCR4-associated factor 1", "protein_names_refseq": "CCR4-NOT transcription complex subunit 1; CCR4-associated factor 1", "tax_id": 7955, "disease": "Vissers-Bodmer syndrome (Disease Ontology:DOID:0081397); holoprosencephaly 12 (Disease Ontology:DOID:0081398); heart disease (Disease Ontology:DOID:114)", "pathway": " (dre:448949); (R-DRE-6804115)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "15256591;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC128655.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC128655.1. On Mar 11, 2007 this sequence version replaced XP_683755.2., [RefSeq]; Scaffolding component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression. Its scaffolding function implies its interaction with the catalytic complex module and diverse RNA-binding proteins mediating the complex recruitment to selected mRNA 3'UTRs. Acts as a transcriptional repressor. Represses the ligand-dependent transcriptional activation by nuclear receptors (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q6DRB0", "ec_number_list": "", "go_molecular_function": "GO:0060090 molecular adaptor activity;GO:0030331 nuclear estrogen receptor binding;GO:0042974 nuclear retinoic acid receptor binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000932 P-body;GO:0030014 CCR4-NOT complex;GO:0030015 CCR4-NOT core complex", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0017148 negative regulation of translation;GO:0048589 developmental growth;GO:0031047 regulatory ncRNA-mediated gene silencing", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A1A5H6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1IGX5-1", "uniprot_id": "FIBIN_DANRE", "mass": 24229.0, "length": 210, "protein_name": "Fin bud initiation factor", "gene_name": "fibin", "organism": "Zebrafish", "refseq_name": "fin bud initiation factor precursor", "refseq_ac": "NP_001017873", "gene_names_uniprotkb": "fibin; zgc:110676", "gene_names_refseq": "cb374; fibinb; fibin; sb:cb374; zgc:110676", "protein_names_uniprotkb": "Fin bud initiation factor", "protein_names_refseq": "fin bud initiation factor precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:550571)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "17196583", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC092975.1, GFIL01010600.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Mar 12, 2009 this sequence version replaced NP_001017873.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Essential for the initiation of pectoral fin bud formation. Potentially acts downstream of retinoic acid and Wnt signaling and is required for tbx5 expression in the lateral plate mesoderm of presumptive pectoral fin bud regions., [UniProtKB, PubMed]; Fibin is a secreted signal essential for pectoral fin bud initiation in that it potentially acts downstream of retinoic acid and wnt signaling and is essential for tbx5 expression., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q567Y0", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0035118 embryonic pectoral fin morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A1IGX5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1L1W9-1", "uniprot_id": "MOT10_DANRE", "mass": 55005.0, "length": 505, "protein_name": "Monocarboxylate transporter 10", "gene_name": "slc16a10", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "slc16a10; MCT10; si:ch211-241j12.1; zgc:158478", "gene_names_refseq": "", "protein_names_uniprotkb": "Monocarboxylate transporter 10; MCT 10; Solute carrier family 16 member 10", "protein_names_refseq": "", "tax_id": 7955, "disease": "esophagus squamous cell carcinoma (Disease Ontology:DOID:3748)", "pathway": " (dre:566499); (R-DRE-352230)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "Sodium- and proton-independent thyroid hormones and aromatic acids transporter. Mediates both uptake and efflux of 3,5,3'-triiodothyronine (T3) and 3,5,3',5'-tetraiodothyronine (T4) with high affinity, suggesting a role in the homeostasis of thyroid hormone levels (By similarity). Responsible for low affinity bidirectional transport of the aromatic amino acids, such as phenylalanine, tyrosine, tryptophan and L-3,4-dihydroxyphenylalanine (L-dopa). Plays an important role in homeostasis of aromatic amino acids (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q5RHJ2", "ec_number_list": "", "go_molecular_function": "GO:0015196 L-tryptophan transmembrane transporter activity;GO:0022857 transmembrane transporter activity;GO:0015173 aromatic amino acid transmembrane transporter activity;GO:0015349 thyroid hormone transmembrane transporter activity;GO:0005302 L-tyrosine transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane", "go_biological_process": "GO:0015801 aromatic amino acid transport;GO:0070327 thyroid hormone transport", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A1L1W9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1L224-1", "uniprot_id": "CR3L2_DANRE", "mass": 56901.0, "length": 519, "protein_name": "Cyclic AMP-responsive element-binding protein 3-like protein 2", "gene_name": "creb3l2", "organism": "Zebrafish", "refseq_name": "cyclic AMP-responsive element-binding protein 3-like protein 2", "refseq_ac": "NP_001074120", "gene_names_uniprotkb": "creb3l2; zgc:158603", "gene_names_refseq": "creb3l2; zgc:158603", "protein_names_uniprotkb": "Cyclic AMP-responsive element-binding protein 3-like protein 2; cAMP-responsive element-binding protein 3-like protein 2", "protein_names_refseq": "cAMP-responsive element-binding protein 3-like protein 2; cyclic AMP-responsive element-binding protein 3-like protein 2; feelgood; fel", "tax_id": 7955, "disease": "", "pathway": " (dre:791169)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21729877", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.931013.1, SRR32588730.21791193.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Transcription factor involved in unfolded protein response (UPR). In the absence of endoplasmic reticulum (ER) stress, inserted into ER membranes, with N-terminal DNA-binding and transcription activation domains oriented toward the cytosolic face of the membrane. In response to ER stress, transported to the Golgi, where it is cleaved in a site-specific manner by resident proteases S1P/mbtps1 and S2P/mbtps2. The released N-terminal cytosolic domain is translocated to the nucleus to effect transcription of specific target genes. Plays a critical role in chondrogenesis. May protect neuroblastoma cells from ER stress-induced death. In vitro activates transcription of target genes via direct binding to the CRE site., [UniProtKB, UniProtKB]; Zebrafish feelgood mutation causes a single amino acid substitution within the DNA-binding domain of transcription factor Creb3l2.[Feelgood], [RefSeq, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 3, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0035497 cAMP response element binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0060628 regulation of ER to Golgi vesicle-mediated transport;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0002062 chondrocyte differentiation;GO:0034976 response to endoplasmic reticulum stress", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A1L224-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1L260-1", "uniprot_id": "CVN4A_DANRE", "mass": 36534.0, "length": 329, "protein_name": "Caveolae-associated protein 4a", "gene_name": "cavin4a", "organism": "Zebrafish", "refseq_name": "caveolae-associated protein 4a", "refseq_ac": "NP_001073667", "gene_names_uniprotkb": "cavin4a; im:6895682; murca; murc; zgc:158664", "gene_names_refseq": "cavin4a; im:6895682; murca; murc; zgc:158664", "protein_names_uniprotkb": "Caveolae-associated protein 4a; Muscle-related coiled-coil protein a; Muscle-restricted coiled-coil protein", "protein_names_refseq": "caveolae-associated protein 4a; muscle-related coiled-coil protein a; muscle-restricted coiled-coil protein", "tax_id": 7955, "disease": "", "pathway": " (dre:552940)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "18307296;34633413", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC129363.1, GDQQ01044884.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On or before Jun 20, 2025 this sequence version replaced XP_073773335.1, NP_001073667.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Cavin4 interacts with Bin1 to promote T-tubule formation and stability in developing skeletal muscle., [RefSeq, PubMed]; Induces rhoa activation and activates nppa transcription and myofibrillar organization through the rho/rock signaling pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0P480", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0030017 sarcomere;GO:0005901 caveola", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0007517 muscle organ development;GO:0010468 regulation of gene expression;GO:0033292 T-tubule organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A1L260-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1L2F3-1", "uniprot_id": "NUSAP_DANRE", "mass": 49887.0, "length": 446, "protein_name": "Nucleolar and spindle-associated protein 1", "gene_name": "nusap1", "organism": "Zebrafish", "refseq_name": "nucleolar and spindle-associated protein 1", "refseq_ac": "NP_001139166", "gene_names_uniprotkb": "nusap1", "gene_names_refseq": "YF-9; ankt; fb76a01; fi37a11; nusap1; sb:cb490; wu:fb76a01; wu:fi37a11", "protein_names_uniprotkb": "Nucleolar and spindle-associated protein 1; NuSAP", "protein_names_refseq": "nuSAP; nucleolar and spindle-associated protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:567446)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12641569;21203972", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115272.1, GFIL01028964.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1, BC124066.1 and AW777914.1. On May 9, 2009 this sequence version replaced XP_695834.2., [RefSeq]; Microtubule-associated protein with the capacity to bundle and stabilize microtubules. May associate with chromosomes and promote the organization of mitotic spindle microtubules around them (By similarity)., [UniProtKB]; When the in vivo expression of nusap1 was knocked down through antisense oligonucleotide morpholino technology, the morphants of nusap1 showed impaired morphogenesis in the trunk and yolk extension, implying the involvement of Nusap1 in cell migration., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A5D6S5;Q08CW0;Q1RLV4;Q7T2W2", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0008017 microtubule binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0072686 mitotic spindle", "go_biological_process": "GO:0001755 neural crest cell migration;GO:0007076 mitotic chromosome condensation;GO:0000281 mitotic cytokinesis;GO:0040001 establishment of mitotic spindle localization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A1L2F3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A1XQY1-1", "uniprot_id": "NR3BA_DANRE", "mass": 185768.0, "length": 1686, "protein_name": "Neurexin-3b", "gene_name": "nrxn3b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "nrxn3b", "gene_names_refseq": "", "protein_names_uniprotkb": "Neurexin-3b; Neurexin IIIb-alpha; Neurexin-3b-alpha", "protein_names_refseq": "", "tax_id": 7955, "disease": "alcohol dependence (Disease Ontology:DOID:0050741); nicotine dependence (Disease Ontology:DOID:0050742); autism spectrum disorder (Disease Ontology:DOID:0060041)", "pathway": " (dre:570698)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "17041151", "class_list": "", "function": "Neuronal cell surface protein that may be involved in cell recognition and cell adhesion., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A1XQY2", "ec_number_list": "", "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0046872 metal ion binding;GO:0097109 neuroligin family protein binding", "go_cellular_component": "GO:0048787 presynaptic active zone membrane;GO:0005886 plasma membrane;GO:0098820 trans-synaptic protein complex;GO:0016020 membrane", "go_biological_process": "GO:0097116 gephyrin clustering involved in postsynaptic density assembly;GO:0007155 cell adhesion;GO:0007165 signal transduction;GO:0007399 nervous system development;GO:0007612 learning", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A1XQY1-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A2AV36-1", "uniprot_id": "ANM7_DANRE", "mass": 76547.0, "length": 683, "protein_name": "Protein arginine N-methyltransferase 7", "gene_name": "prmt7", "organism": "Zebrafish", "refseq_name": "protein arginine N-methyltransferase 7", "refseq_ac": "NP_956797", "gene_names_uniprotkb": "prmt7; ch211-51l3.2; zgc:66172", "gene_names_refseq": "prmt7; zgc:66172", "protein_names_uniprotkb": "Protein arginine N-methyltransferase 7; 2.1.1.321; Histone-arginine N-methyltransferase PRMT7; [Myelin basic protein]-arginine N-methyltransferase PRMT7", "protein_names_refseq": "Histone-arginine N-methyltransferase PRMT7; [Myelin basic protein]-arginine N-methyltransferase PRMT7; protein arginine N-methyltransferase 7", "tax_id": 7955, "disease": "", "pathway": " (dre:393475); (R-DRE-3214858)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "23594743;26186943;30383201;31914680", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01006504.1, GDQQ01007953.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000025.1. On Apr 11, 2008 this sequence version replaced NP_956797.1., [RefSeq]; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being recruited by CTCFL at the H19 imprinted control region (ICR) and methylating histone H4 to form H4R3me2s, possibly leading to recruit DNA methyltransferases at these sites. May also play a role in embryonic stem cell (ESC) pluripotency. Also able to mediate the arginine methylation of histone H2A and myelin basic protein (MBP) in vitro; the relevance of such results is however unclear in vivo., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]; By suppressing the RIG-I-like receptors signaling, zebrafish prmt7 negatively regulates antiviral responses, indicating the vital role of prmt7 and its arginine methyltransferase activity in innate immunity, [RefSeq, PubMed]; Data show that epiboly relies on the molecular networking of protein arginine methyltransferase 7 (Prmt7) by facilitating syntenin, which acts as a regulator for cytoskeleton., [RefSeq, PubMed]; Prmt7 regulates epiboly by facilitating 2-OST and modulating actin cytoskeleton, [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q803G6", "ec_number_list": "2.1.1.321;2.1.1.319", "go_molecular_function": "GO:0016274 protein-arginine N-methyltransferase activity;GO:0042054 histone methyltransferase activity;GO:0044020 histone H4R3 methyltransferase activity;GO:0008757 S-adenosylmethionine-dependent methyltransferase activity;GO:0035241 protein-arginine omega-N monomethyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0007010 cytoskeleton organization;GO:0018216 peptidyl-arginine methylation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A2AV36-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q1LUM9-1", "uniprot_id": "Q1LUM9_DANRE", "mass": 55372.0, "length": 501, "protein_name": "Dynein light intermediate chain", "gene_name": "dync1li1", "organism": "Zebrafish", "refseq_name": "cytoplasmic dynein 1 light intermediate chain 1", "refseq_ac": "NP_001095898", "gene_names_uniprotkb": "dync1li1; dncli2; fc73a07; si:dkey-63j1.8; wu:fc73a07", "gene_names_refseq": "dncli2; dync1li1; fc73a07; si:dkey-63j1.8; wu:fc73a07", "protein_names_uniprotkb": "Dynein light intermediate chain", "protein_names_refseq": "cytoplasmic dynein 1 light intermediate chain 1; dynein, cytoplasmic, light intermediate chain 1", "tax_id": 7955, "disease": "", "pathway": " (dre:556103); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220); (R-DRE-6798695); (R-DRE-9646399)", "pathway_count": 8, "publication_count": 10, "publication_id_list": "16631158;21468032;23468645;27189481;28003657;28252024;32173581;34117063;35929537;36682603", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01009082.1, SRR32588723.1238247.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Aug 24, 2007 this sequence version replaced XP_683170.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]; Knockout of DLIC1 leads to retinal cone degeneration via disturbing Rab8 transport in zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KPZ3", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0045504 dynein heavy chain binding", "go_cellular_component": "GO:0005874 microtubule;GO:0005868 cytoplasmic dynein complex", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0060236 regulation of mitotic spindle organization;GO:0036372 opsin transport;GO:0009794 regulation of mitotic cell cycle, embryonic;GO:0097474 retinal cone cell apoptotic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LUM9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B8A530-1", "uniprot_id": "B8A530_DANRE", "mass": 32162.0, "length": 282, "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "marchf8", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase MARCHF8 isoform 1", "refseq_ac": "NP_001154907", "gene_names_uniprotkb": "marchf8; march8; zgc:171495", "gene_names_refseq": "march8; marchf8; zgc:171495", "protein_names_uniprotkb": "RING-type E3 ubiquitin transferase; 2.3.2.27", "protein_names_refseq": "E3 ubiquitin-protein ligase MARCHF8 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:567818)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15520368;24752240;26469318;27189481;35764162;37054851", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395039.1599874.1, SRR32588727.1183294.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On May 28, 2016 this sequence version replaced XP_005156706.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; March 8 functions in the embryo to modulate the strength of cell adhesion by regulating the localization of E-cadherin. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NT04;A0AC58H1R6;A0AC58H1S8", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0042287 MHC protein binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005764 lysosome;GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0031901 early endosome membrane", "go_biological_process": "GO:0006955 immune response;GO:0016567 protein ubiquitination;GO:0000209 protein polyubiquitination;GO:0050687 negative regulation of defense response to virus;GO:0002495 antigen processing and presentation of peptide antigen via MHC class II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B8A530-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QE54-1", "uniprot_id": "F1QE54_DANRE", "mass": 61296.0, "length": 562, "protein_name": "Activated leukocyte cell adhesion molecule b precursor", "gene_name": "alcamb", "organism": "Zebrafish", "refseq_name": "activated leukocyte cell adhesion molecule b precursor", "refseq_ac": "NP_997799", "gene_names_uniprotkb": "alcamb; fb53h09; fb80a10; nlcam; si:ch211-190h2.4; wu:fb53h09; wu:fb80a10; wu:fc14b01", "gene_names_refseq": "alcamb; fb53h09; fb80a10; nlcam; si:ch211-190h2.4; wu:fb53h09; wu:fb80a10; wu:fc14b01", "protein_names_uniprotkb": "Activated leukocyte cell adhesion molecule b precursor", "protein_names_refseq": "activated leukocyte cell adhesion molecule b precursor; neurolin-b; neurolin-like cell adhesion molecule", "tax_id": 7955, "disease": "", "pathway": " (dre:323919)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "16750657;17703193;19107846;20005219;20935258;27935819;27974617;29700229;30944477;36427314;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01000850.1, AY050561.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Oct 26, 2010 this sequence version replaced NP_997799.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; ALCAM-family member, NLCAM, appears to have arisen by duplication of neurolin/ALCAM., [RefSeq, PubMed]; Propose that Nlcam forms part of the guidance machinery directing rapid midline migration of forebrain precursors, where it is normally expressed, [RefSeq, PubMed]; Results suggest that the zebrafish Neurolin-a and -b paralogs are involved in distinct steps of retinotectal development., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHR6", "ec_number_list": "", "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030424 axon;GO:0030425 dendrite", "go_biological_process": "GO:0007155 cell adhesion;GO:0002250 adaptive immune response;GO:0060385 axonogenesis involved in innervation;GO:0021885 forebrain cell migration;GO:0031290 retinal ganglion cell axon guidance", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "F1QE54-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B0UXP9-1", "uniprot_id": "IMDH2_DANRE", "mass": 55696.0, "length": 514, "protein_name": "Inosine-5'-monophosphate dehydrogenase 2", "gene_name": "impdh2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "impdh2; IMPD 2; IMPDH 2; IMPDH; cb635; si:dkey-90l2.2; wu:fb64g02; wu:fc43f09", "gene_names_refseq": "", "protein_names_uniprotkb": "Inosine-5'-monophosphate dehydrogenase 2; 1.1.1.205; IMP dehydrogenase 2; IMPD 2; IMPDH 2", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-6798695); (R-DRE-73817); (R-DRE-9748787)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth., [UniProtKB, HAMAP, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "4.2.99.18;5.6.2.4;2.7.1.11;3.6.4.13;2.7.1.40;1.1.1.205;5.4.2.11;5.4.2.4;2.7.1.35;1.13.11.34;3.2.1.31;3.6.5.-;2.3.2.27;3.6.4.6;4.1.2.13;2.7.11.24;1.11.1.6", "go_molecular_function": "GO:0046872 metal ion binding;GO:0000166 nucleotide binding;GO:0003938 IMP dehydrogenase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0007623 circadian rhythm;GO:0006177 GMP biosynthetic process;GO:0006183 GTP biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0UXP9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QIB3-1", "uniprot_id": "F1QIB3_DANRE", "mass": 53997.0, "length": 476, "protein_name": "Drebrin-like b isoform X1", "gene_name": "dbnlb", "organism": "Zebrafish", "refseq_name": "drebrin-like b isoform X1", "refseq_ac": "XP_005167394", "gene_names_uniprotkb": "dbnlb; dbnl; zgc:112450", "gene_names_refseq": "dbnlb; dbnl; zgc:112450", "protein_names_uniprotkb": "Drebrin-like b isoform X1", "protein_names_refseq": "drebrin-like b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:553729)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "25014315;26469318;27189481;28252024;31560986;40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BEQ7", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005769 early endosome;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005938 cell cortex", "go_biological_process": "GO:0048812 neuron projection morphogenesis;GO:0098974 postsynaptic actin cytoskeleton organization;GO:0045773 positive regulation of axon extension;GO:0061003 positive regulation of dendritic spine morphogenesis;GO:0030833 regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F1QIB3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1Q597-1", "uniprot_id": "F1Q597_DANRE", "mass": 159333.0, "length": 1452, "protein_name": "[histone H3]-trimethyl-L-lysine(27) demethylase", "gene_name": "kdm6a", "organism": "Zebrafish", "refseq_name": "lysine-specific demethylase 6A isoform X1", "refseq_ac": "XP_005167851", "gene_names_uniprotkb": "kdm6a", "gene_names_refseq": "kdm6a", "protein_names_uniprotkb": "[histone H3]-trimethyl-L-lysine(27) demethylase; 1.14.11.68", "protein_names_refseq": "lysine-specific demethylase 6A isoform X1", "tax_id": 7955, "disease": "triple-receptor negative breast cancer (Disease Ontology:DOID:0060081); Kabuki syndrome (Disease Ontology:DOID:0060473); adenoid cystic carcinoma (Disease Ontology:DOID:0080202); prostate cancer (Disease Ontology:DOID:10283); stomach cancer (Disease Ontology:DOID:10534); breast cancer (Disease Ontology:DOID:1612); rectum adenocarcinoma (Disease Ontology:DOID:1996); colon adenocarcinoma (Disease Ontology:DOID:234); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); lung non-small cell carcinoma (Disease Ontology:DOID:3908); bladder urothelial carcinoma (Disease Ontology:DOID:4006); renal cell carcinoma (Disease Ontology:DOID:4450); lung small cell carcinoma (Disease Ontology:DOID:5409); hepatocellular carcinoma (Disease Ontology:DOID:684); malignant pleural mesothelioma (Disease Ontology:DOID:7474); colorectal cancer (Disease Ontology:DOID:9256); acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:569277); (R-DRE-3214842)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 17, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BF90", "ec_number_list": "1.14.11.68;1.14.11.-", "go_molecular_function": "GO:0046872 metal ion binding;GO:0071558 histone H3K27me2/H3K27me3 demethylase activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0031490 chromatin DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0044666 MLL3/4 complex", "go_biological_process": "GO:0007420 brain development;GO:0060324 face development;GO:0048701 embryonic cranial skeleton morphogenesis;GO:0008354 germ cell migration;GO:0048703 embryonic viscerocranium morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1Q597-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QI81-1", "uniprot_id": "F1QI81_DANRE", "mass": 24139.0, "length": 221, "protein_name": "Hairy-related 8a", "gene_name": "her8a", "organism": "Zebrafish", "refseq_name": "hairy-related 8a", "refseq_ac": "NP_955918", "gene_names_uniprotkb": "her8a; her-8a; her-8b; her8b; wu:fb75f05; wu:fc06c04; zgc:85712", "gene_names_refseq": "her-8a; her-8b; her8a; her8b; wu:fb75f05; wu:fc06c04; zgc:85712", "protein_names_uniprotkb": "Hairy-related 8a", "protein_names_refseq": "hairy-related 8a; hairy-related 8b", "tax_id": 7955, "disease": "central nervous system cancer (Disease Ontology:DOID:3620)", "pathway": " (dre:323656)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "12160468;16544152;19005681;21452233;21468032;27189481;32500975;34325655;38850245;39273123", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY007991.1, BC068368.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505386, SAMEA3505393 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Jun 25, 2025 this sequence version replaced NP_955918.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PE83;F1R6H0", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0046983 protein dimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0042063 gliogenesis;GO:0050768 negative regulation of neurogenesis;GO:0009952 anterior/posterior pattern specification", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "F1QI81-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RE66-1", "uniprot_id": "F1RE66_DANRE", "mass": 124956.0, "length": 1134, "protein_name": "Roundabout homolog 4 isoform X1", "gene_name": "robo4", "organism": "Zebrafish", "refseq_name": "roundabout homolog 4 isoform X1", "refseq_ac": "XP_689255", "gene_names_uniprotkb": "robo4", "gene_names_refseq": "robo4", "protein_names_uniprotkb": "Roundabout homolog 4 isoform X1", "protein_names_refseq": "roundabout homolog 4 isoform X1", "tax_id": 7955, "disease": "aortic valve disease 3 (Disease Ontology:DOID:0080977); pre-eclampsia (Disease Ontology:DOID:10591); thyroid gland carcinoma (Disease Ontology:DOID:3963)", "pathway": " (dre:560765)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_689255.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UV64", "ec_number_list": "", "go_molecular_function": "GO:0098632 cell-cell adhesion mediator activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0030424 axon", "go_biological_process": "GO:0051057 positive regulation of small GTPase mediated signal transduction;GO:0001525 angiogenesis;GO:0046847 filopodium assembly;GO:0030032 lamellipodium assembly;GO:0043542 endothelial cell migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1RE66-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F8W4Z6-1", "uniprot_id": "F8W4Z6_DANRE", "mass": 76390.0, "length": 671, "protein_name": "NADPH--cytochrome P450 reductase", "gene_name": "porb", "organism": "Zebrafish", "refseq_name": "P450 (cytochrome) oxidoreductase b", "refseq_ac": "NP_001307368", "gene_names_uniprotkb": "porb; POR; fb60a10; fi17c02; im:7051962; wu:fb60a10; wu:fi17c02; zgc:63480", "gene_names_refseq": "fb60a10; fi17c02; im:7051962; porb; wu:fb60a10; wu:fi17c02; zgc:63480", "protein_names_uniprotkb": "NADPH--cytochrome P450 reductase; 1.6.2.4; CPR; P450R", "protein_names_refseq": "P450 (cytochrome) oxidoreductase b", "tax_id": 7955, "disease": "Antley-Bixler syndrome with disordered steroidogenesis (Disease Ontology:DOID:0050462); congenital adrenal hyperplasia (Disease Ontology:DOID:0050811); cytochrome P450 oxidoreductase deficiency (Disease Ontology:DOID:0080925)", "pathway": " (dre:327556)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "26469318;27189481;28252024;29883909;37070960", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588728.14419839.1, SRR26395028.156611.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by partial transcript alignments and orthologous alignments., [RefSeq]; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5., [UniProtKB, HAMAP, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8C5;A0AC58HA80", "ec_number_list": "1.6.2.4", "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0010181 FMN binding;GO:0050661 NADP binding;GO:0003958 NADPH-hemoprotein reductase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0005829 cytosol", "go_biological_process": "GO:0009725 response to hormone;GO:0006809 nitric oxide biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F8W4Z6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QLF9-1", "uniprot_id": "F1QLF9_DANRE", "mass": 101638.0, "length": 912, "protein_name": "Origin recognition complex subunit 1", "gene_name": "orc1", "organism": "Zebrafish", "refseq_name": "origin recognition complex subunit 1 isoform X1", "refseq_ac": "XP_005166338", "gene_names_uniprotkb": "orc1; orc1l; wu:fa11h08; zgc:55976", "gene_names_refseq": "orc1l; orc1; wu:fa11h08; zgc:55976", "protein_names_uniprotkb": "Origin recognition complex subunit 1", "protein_names_refseq": "origin recognition complex subunit 1 isoform X1", "tax_id": 7955, "disease": "Meier-Gorlin syndrome 1 (Disease Ontology:DOID:0080512)", "pathway": " (R-DRE-68616); (R-DRE-68689); (R-DRE-68949); (R-DRE-68962)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BDS9", "ec_number_list": "", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005664 nuclear origin of replication recognition complex", "go_biological_process": "GO:0001878 response to yeast;GO:0040014 regulation of multicellular organism growth;GO:0006260 DNA replication;GO:0060271 cilium assembly;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QLF9-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B0V1H8-1", "uniprot_id": "B0V1H8_DANRE", "mass": 49669.0, "length": 430, "protein_name": "Nuclear receptor subfamily 1 group I member 2", "gene_name": "nr1i2", "organism": "Zebrafish", "refseq_name": "nuclear receptor subfamily 1 group I member 2", "refseq_ac": "NP_001092087", "gene_names_uniprotkb": "nr1i2; PXR", "gene_names_refseq": "PXR; nr1i2", "protein_names_uniprotkb": "Nuclear receptor subfamily 1 group I member 2; Orphan nuclear receptor PXR; Pregnane X receptor", "protein_names_refseq": "nuclear receptor subfamily 1 group I member 2; pregnane X receptor", "tax_id": 7955, "disease": "cholestasis (Disease Ontology:DOID:13580); epilepsy (Disease Ontology:DOID:1826)", "pathway": " (dre:565875)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11981033;15718292;15914091;16197547;17997606;34006636;34084152;34481069;34528064;36835354", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588733.82245.1, SRR32588719.572165.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On or before Apr 21, 2018 this sequence version replaced XP_005167477.1, NP_001092087.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Nuclear receptor that acts as a transcription factor regulating genes involved in the metabolism and excretion of xenobiotics, drugs, and endogenous compounds. Activated by a broad range of endogenous steroids (e.g. pregnenolone, progesterone) and xenobiotics, including the antibiotic rifampicin and certain plant-derived metabolites. Upon ligand binding, translocates to the nucleus, forms a heterodimer with the retinoid X receptor/RXR, and binds to response elements in target promoters, leading to transcriptional activation. Target genes include cytochrome P450 enzymes such as CYP3A4 and ATP-binding cassette transporters including ABCB1/MDR1., [UniProtKB, UniProtKB, UniProtKB]; Similar pattern of mRNA expression of PXR, cytochrome P4503A and multiple drug resistance 1 genes found in fish treated with different PXR inducers suggests that the intrinsic association between these three genes is conserved in zebrafish, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BET5", "ec_number_list": "", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003707 nuclear steroid receptor activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding;GO:0004879 nuclear receptor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009636 response to toxic substance;GO:0006366 transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0V1H8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "E9QGN4-1", "uniprot_id": "E9QGN4_DANRE", "mass": 61372.0, "length": 533, "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene_name": "mgat4a", "organism": "Zebrafish", "refseq_name": "alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform X1", "refseq_ac": "XP_691496", "gene_names_uniprotkb": "mgat4a", "gene_names_refseq": "mgat4a", "protein_names_uniprotkb": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A; 2.4.1.145; N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IVa; UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IVa", "protein_names_refseq": "alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform X1", "tax_id": 7955, "disease": "pancreatic cancer (Disease Ontology:DOID:1793)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_691496.2. COMPLETENESS: full length., [RefSeq]; Glycosyltransferase that catalyze the transfer of GlcNAc from UDP-GlcNAc to the GlcNAcbeta1-2Manalpha1-3 arm of the core structure of N-linked glycans through a beta1-4 linkage and participates in the production of tri- and tetra-antennary N-linked sugar chains. Involved in glucose transport by mediating SLC2A2/GLUT2 glycosylation, thereby controlling cell-surface expression of SLC2A2 in pancreatic beta cells., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A286Y8B1;A0A8N7TB45", "ec_number_list": "2.4.1.145", "go_molecular_function": "GO:0046872 metal ion binding;GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E9QGN4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QCX8-1", "uniprot_id": "F1QCX8_DANRE", "mass": 54164.0, "length": 476, "protein_name": "interstitial collagenase", "gene_name": "mmp13a.2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "mmp13a.2; cb1034; mmp13a; mmp13", "gene_names_refseq": "", "protein_names_uniprotkb": "interstitial collagenase; 3.4.24.7", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-1442490); (R-DRE-1474228); (R-DRE-1592389); (R-DRE-210991); (R-DRE-2179392); (R-DRE-381426); (R-DRE-6798695); (R-DRE-9009391)", "pathway_count": 8, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AX13", "ec_number_list": "3.1.3.48;2.7.11.13;3.4.21.4;3.4.21.10;1.8.3.2;2.7.1.35;3.5.3.1;3.4.21.7;3.4.24.7;3.2.1.166;3.5.1.3;4.1.2.13", "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0006508 proteolysis;GO:0030198 extracellular matrix organization;GO:0030574 collagen catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "F1QCX8-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A3KQ55-1", "uniprot_id": "MEPCE_DANRE", "mass": 71700.0, "length": 645, "protein_name": "7SK snRNA methylphosphate capping enzyme", "gene_name": "mepcea; mepce", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "mepcea; mepce; bcdin3; fc59f06; mepcea; mepce; si:ch211-283h6.1; wu:fc59f06; zBCDIN3", "gene_names_refseq": "", "protein_names_uniprotkb": "7SK snRNA methylphosphate capping enzyme; 2.1.1.-; Bicoid-interacting protein 3 homolog; Bin3 homolog; MePCE; zBCDIN3", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:561384)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "12234666;15520368;19416841;23594743;26469318;27189481", "class_list": "", "function": "S-adenosyl-L-methionine-dependent methyltransferase that adds a methylphosphate cap at the 5'-end of 7SK snRNA (7SK RNA), leading to stabilize it. Also has a non-enzymatic function as part of the 7SK RNP complex: the 7SK RNP complex sequesters the positive transcription elongation factor b (P-TEFb) in a large inactive 7SK RNP complex preventing RNA polymerase II phosphorylation and subsequent transcriptional elongation. The 7SK RNP complex also promotes snRNA gene transcription by RNA polymerase II via interaction with the little elongation complex (LEC). In the 7SK RNP complex, MEPCE is required to stabilize 7SK RNA and facilitate the assembly of 7SK RNP complex: it has a non-enzymatic function (By similarity). MEPCE has a non-enzymatic function in the 7SK RNP complex; interaction with LARP7 within the 7SK RNP complex occluding its catalytic center (By similarity). Also required for stability of U6 snRNAs (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.1.1.-", "go_molecular_function": "GO:0008757 S-adenosylmethionine-dependent methyltransferase activity;GO:0008171 O-methyltransferase activity;GO:0017069 snRNA binding;GO:0008173 RNA methyltransferase activity;GO:1990276 RNA 5'-gamma-phosphate methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:1904871 positive regulation of protein localization to Cajal body;GO:1905382 positive regulation of snRNA transcription by RNA polymerase II;GO:0001510 RNA methylation;GO:0016073 snRNA metabolic process;GO:0040031 snRNA modification", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A3KQ55-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q1LW89-1", "uniprot_id": "CASD1_DANRE", "mass": 88736.0, "length": 781, "protein_name": "N-acetylneuraminate (7)9-O-acetyltransferase", "gene_name": "casd1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "casd1; Cas1p; SOAT; si:dkey-104m9.2; zgc:136291", "gene_names_refseq": "", "protein_names_uniprotkb": "N-acetylneuraminate (7)9-O-acetyltransferase; 2.3.1.45; CAS1 domain-containing protein 1; CAS1 protein; Cas1p; SOAT; Sialate O-acetyltransferase", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:692268)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23594743;26469318;26876635;27189481;30135188", "class_list": "", "function": "Key enzyme in the biosynthesis of O-acetylated (O-Ac) sialoglycans such as gangliosides O-AcGD3 and O-AcGD2, which affect various processes such as cell-cell interactions, host-pathogen recognition. Catalyzes the transfer of an acetyl group from a donor, the acetyl-coenzyme-A molecule (acetyl-CoA), to the C7/8/9 OH-position of a sialic acid residue. The primary site of O-acetyl group transfer on sialic acid seems to depend on cell type and can be C7, from which the O-acetyl group could subsequently migrate to the C8 and then to the C9 position, or at C9 with possibility of migrating to the C8 and then to the C7 position. Together with ST8SIA1 (GD3 synthase) it increases the levels of ganglioside Ac-O-7-GD3. Can transfer the acetyl group from acetyl-CoA to free sialate (N-acetylneuraminate, Neu5Ac) in vitro, but has preferred substrate specificity for CMP-activated sialate (CMP-Neu5Ac), resulting in the formation of 9-O-acetylated CMP-Neu5Ac (CMP-Neu5,9Ac2). CMP-Neu5,9Ac2 may be used by sialyltransferases as a sialate donor for glycoconjugate acceptors such as ganglioside GD3. O-acetylation at position C9 of ganglioside GD3 can counteract the pro-apoptotic effects of the ganglioside GD3 in tumor cells., [UniProtKB, UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q1JQ49;Q4V8Z8", "ec_number_list": "2.3.1.45", "go_molecular_function": "GO:0047186 N-acetylneuraminate 9-O-acetyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0005975 carbohydrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1LW89-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A5PF48-1", "uniprot_id": "MYO1C_DANRE", "mass": 118063.0, "length": 1026, "protein_name": "Unconventional myosin-Ic", "gene_name": "myo1ca; myo1c", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "myo1ca; myo1c; MMI-beta; MMIb; Myo1c; Myosin-Ic; si:ch211-69i14.4", "gene_names_refseq": "", "protein_names_uniprotkb": "Unconventional myosin-Ic; MMI-beta; MMIb; Myosin I beta", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:567536)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23594743;23715127;26066004;26469318;27189481", "class_list": "", "function": "Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0000146 microfilament motor activity;GO:0003779 actin binding;GO:0003774 cytoskeletal motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005938 cell cortex;GO:0015629 actin cytoskeleton;GO:0031410 cytoplasmic vesicle", "go_biological_process": "GO:0006897 endocytosis;GO:0007015 actin filament organization;GO:0030048 actin filament-based movement;GO:0032835 glomerulus development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A5PF48-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A3KNX5-1", "uniprot_id": "BHA09_DANRE", "mass": 29911.0, "length": 271, "protein_name": "Class A basic helix-loop-helix protein 9", "gene_name": "bhlha9", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "bhlha9; bhlhf42; wu:fb99e06", "gene_names_refseq": "", "protein_names_uniprotkb": "Class A basic helix-loop-helix protein 9; Class B basic helix-loop-helix factor 42; bHLHa9; bHLHf42", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:323481)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "19449054;22147889;35134499", "class_list": "", "function": "Transcription factor, which play a role in limb development. Is an essential player in the regulatory network governing transcription of genes implicated in limb morphogenesis., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0032502 developmental process;GO:0033339 pectoral fin development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A3KNX5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q06S87-1", "uniprot_id": "HIUH_DANRE", "mass": 15486.0, "length": 138, "protein_name": "5-hydroxyisourate hydrolase", "gene_name": "uraha; urah", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "uraha; urah; urah; zgc:153543", "gene_names_refseq": "", "protein_names_uniprotkb": "5-hydroxyisourate hydrolase; 3.5.2.17; HIU hydrolase; HIUHase; Transthyretin-related protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "hyperuricemia (Disease Ontology:DOID:1920)", "pathway": " (dre:751742)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "16462750;16952372;23994290;27189481;27922051;28508122;35295584", "class_list": "", "function": "Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0P422", "ec_number_list": "3.5.2.17", "go_molecular_function": "GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;GO:0033971 hydroxyisourate hydrolase activity", "go_cellular_component": "GO:0005777 peroxisome", "go_biological_process": "GO:0019628 urate catabolic process;GO:0006144 purine nucleobase metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q06S87-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P58239-1", "uniprot_id": "CNMD_DANRE", "mass": 32235.0, "length": 286, "protein_name": "Leukocyte cell-derived chemotaxin 1", "gene_name": "cnmd", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "cnmd; cb298; chm1; chmi; fb55b05; lect1; wu:fb55b05", "gene_names_refseq": "", "protein_names_uniprotkb": "Leukocyte cell-derived chemotaxin 1; ChM-I; Chondromodulin-I; Chondromodulin", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:791772)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11429291;16109975;18590717;18654627;21144052;27189481;30840836;31336923;33501917;34397384", "class_list": "", "function": "Bifunctional growth regulator. May contribute to the rapid growth of cartilage and vascular invasion prior to the replacement of cartilage by bone during endochondral bone development. Plays a role as antiangiogenic factor in cardiac valves to suppress neovascularization (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0012505 endomembrane system", "go_biological_process": "GO:0030154 cell differentiation;GO:0001937 negative regulation of endothelial cell proliferation;GO:0016525 negative regulation of angiogenesis;GO:0051216 cartilage development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P58239-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q2XVR3-1", "uniprot_id": "SC4AA_DANRE", "mass": 207737.0, "length": 1829, "protein_name": "Sodium channel protein type 4 subunit alpha A", "gene_name": "scn4aa", "organism": "Zebrafish", "refseq_name": "sodium channel protein type 4 subunit alpha A", "refseq_ac": "NP_001034914", "gene_names_uniprotkb": "scn4aa; Na_v 1.4a; Nav1.4a; nav1.4a", "gene_names_refseq": "Nav1.4a; scn4aa; zscn3", "protein_names_uniprotkb": "Sodium channel protein type 4 subunit alpha A; Voltage-gated sodium channel subunit alpha Nav1.4a", "protein_names_refseq": "sodium channel protein type 4 subunit alpha A; voltage-gated sodium channel Nav1.4a; voltage-gated sodium channel subunit alpha Nav1.4a", "tax_id": 7955, "disease": "generalized epilepsy with febrile seizures plus (Disease Ontology:DOID:0060170); Dravet syndrome (Disease Ontology:DOID:0080422); congenital myopathy 22A (Disease Ontology:DOID:0081354); congenital myopathy 22B (Disease Ontology:DOID:0081355); congenital myasthenic syndrome 16 (Disease Ontology:DOID:0110682); generalized epilepsy with febrile seizures plus 2 (Disease Ontology:DOID:0111294); paramyotonia congenita of Von Eulenburg (Disease Ontology:DOID:0111538); hyperkalemic periodic paralysis (Disease Ontology:DOID:14451); hypokalemic periodic paralysis (Disease Ontology:DOID:14452); epilepsy (Disease Ontology:DOID:1826)", "pathway": " (dre:572442)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16303569;16830092", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01034506.1, SRR32588714.18764474.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505381, SAMEA4476731 [ECO:0000350] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On or before Jul 30, 2025 this sequence version replaced XP_017213968.1, NP_001034914.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient., [UniProtKB, UniProtKB]; Pore-forming subunit of a voltage-gated sodium (Nav) channel that directly mediates the depolarizing phase of action potentials in excitable membranes. Navs, also called VGSCs (voltage-gated sodium channels) or VDSCs (voltage-dependent sodium channels), operate by switching between closed and open conformations depending on the voltage difference across the membrane. In the open conformation they allow Na(+) ions to selectively pass through the pore, along their electrochemical gradient. The influx of Na+ ions provokes membrane depolarization, initiating the propagation of electrical signals throughout cells and tissues., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 10, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q20JQ6", "ec_number_list": "1.5.1.2", "go_molecular_function": "GO:0005248 voltage-gated sodium channel activity", "go_cellular_component": "GO:0030424 axon;GO:0001518 voltage-gated sodium channel complex", "go_biological_process": "GO:0019228 neuronal action potential;GO:0019233 sensory perception of pain;GO:0086010 membrane depolarization during action potential;GO:0035725 sodium ion transmembrane transport;GO:1905150 regulation of voltage-gated sodium channel activity", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q2XVR3-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B0R160-1", "uniprot_id": "LRWD1_DANRE", "mass": 85048.0, "length": 763, "protein_name": "Leucine-rich repeat and WD repeat-containing protein 1", "gene_name": "lrwd1", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat and WD repeat-containing protein 1", "refseq_ac": "NP_001292591", "gene_names_uniprotkb": "lrwd1; ORCA; orca; si:dkey-261j4.9; wu:fb78b03; wu:ft31b04", "gene_names_refseq": "ORCA; lrwd1; si:dkey-261j4.9; wu:fb78b03; wu:ft31b04", "protein_names_uniprotkb": "Leucine-rich repeat and WD repeat-containing protein 1; ORC-associated protein; ORCA; Origin recognition complex-associated protein", "protein_names_refseq": "ORC-associated protein; leucine-rich repeat and WD repeat-containing protein 1; origin recognition complex-associated protein", "tax_id": 7955, "disease": "", "pathway": " (dre:327124)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "18307296;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.38341234.1, SRR32588717.14854230.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476731, SAMEA4476744 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. Sequence Note:., [RefSeq]; Required for G1/S transition. Recruits and stabilizes the origin recognition complex (ORC) onto chromatin during G1 to establish pre-replication complex (preRC) and to heterochromatic sites in post-replicated cells. Binds a combination of DNA and histone methylation repressive marks on heterochromatin. Required for silencing of major satellite repeats. May be important ORC2, ORC3 and ORC4 stability (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q503J1", "ec_number_list": "", "go_molecular_function": "GO:0003682 chromatin binding;GO:0008327 methyl-CpG binding;GO:0061628 histone H3K27me3 reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005813 centrosome;GO:0000776 kinetochore;GO:0005664 nuclear origin of replication recognition complex;GO:0005721 pericentric heterochromatin", "go_biological_process": "GO:0006260 DNA replication;GO:0006325 chromatin organization;GO:0071169 establishment of protein localization to chromatin", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0R160-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F2Z4R5-1", "uniprot_id": "T163B_DANRE", "mass": 30760.0, "length": 284, "protein_name": "Transmembrane protein 163b", "gene_name": "tmem163b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 163b", "refseq_ac": "NP_001410777", "gene_names_uniprotkb": "tmem163b; si:ch73-125n14.1", "gene_names_refseq": "si:ch73-125n14.1; tmem163b", "protein_names_uniprotkb": "Transmembrane protein 163b", "protein_names_refseq": "transmembrane protein 163b", "tax_id": 7955, "disease": "hypomyelinating leukodystrophy 25 (Disease Ontology:DOID:0070401)", "pathway": " (dre:100333673)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "23594743;27189481;28252024;35455965", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.3598755.1, SRR32588730.22969236.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505376, SAMEA4476735 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Aug 16, 2023 this sequence version replaced XP_005174068.1., [RefSeq]; Zinc ion transporter that mediates zinc efflux and plays a crucial role in intracellular zinc homeostasis (By similarity). Binds the divalent cations Zn(2+), Ni(2+), and to a minor extent Cu(2+) (By similarity). Is a functional modulator of P2X purinoceptors, including P2RX1, P2RX3, P2RX4 and P2RX7 (By similarity). Plays a role in central nervous system development and is required for myelination, and survival and proliferation of oligodendrocytes (PubMed:35455965)., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BLF0", "ec_number_list": "2.7.11.1", "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0031901 early endosome membrane;GO:0030672 synaptic vesicle membrane", "go_biological_process": "GO:0042552 myelination;GO:0014003 oligodendrocyte development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F2Z4R5-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A6H8T7-1", "uniprot_id": "CBPC2_DANRE", "mass": 82236.0, "length": 721, "protein_name": "Cytosolic carboxypeptidase 2", "gene_name": "agbl2; zte25", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "agbl2; zte25; agbl2; ccp2; zgc:165648; zte25", "gene_names_refseq": "", "protein_names_uniprotkb": "Cytosolic carboxypeptidase 2; 3.4.17.-; ATP/GTP-binding protein-like 2; Protein deglutamylase CCP2; Testis-expressed protein 25", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:568152)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "18335061;24022483;24743595;26469318;27189481;30899431", "class_list": "", "function": "Metallocarboxypeptidase that mediates deglutamylation of target proteins. Catalyzes the deglutamylation of polyglutamate side chains generated by post-translational polyglutamylation in proteins such as tubulins. Also removes gene-encoded polyglutamates from the carboxy-terminus of target proteins such as MYLK. Does not show detyrosinase or deglycylase activities from the carboxy-terminus of tubulin., [UniProtKB, UniProtKB]; Metallocarboxypeptidase that mediates deglutamylation of tubulin and non-tubulin target proteins. Catalyzes the removal of polyglutamate side chains present on the gamma-carboxyl group of glutamate residues within the C-terminal tail of tubulin protein. Specifically cleaves tubulin long-side-chains, while it is not able to remove the branching point glutamate. Also catalyzes the removal of polyglutamate residues from the carboxy-terminus of non-tubulin proteins., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "3.4.17.24;3.4.17.-", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004181 metallocarboxypeptidase activity;GO:0015631 tubulin binding;GO:0004180 carboxypeptidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0015630 microtubule cytoskeleton;GO:0005814 centriole;GO:0036064 ciliary basal body", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A6H8T7-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B8JK76-1", "uniprot_id": "SDCG8_DANRE", "mass": 80437.0, "length": 701, "protein_name": "Serologically defined colon cancer antigen 8 homolog", "gene_name": "Sdccag8; sdccag8", "organism": "Zebrafish", "refseq_name": "serologically defined colon cancer antigen 8 homolog isoform X1", "refseq_ac": "XP_021336267", "gene_names_uniprotkb": "Sdccag8; sdccag8; si:dkey-60B15.1; si:dkey-60b15.1", "gene_names_refseq": "sdccag8; si:dkey-60b15.1", "protein_names_uniprotkb": "Serologically defined colon cancer antigen 8 homolog", "protein_names_refseq": "serologically defined colon cancer antigen 8 homolog isoform X1", "tax_id": 7955, "disease": "Senior-Loken syndrome (Disease Ontology:DOID:0050576); Bardet-Biedl syndrome 16 (Disease Ontology:DOID:0110138); nephronophthisis (Disease Ontology:DOID:12712)", "pathway": " (dre:556980); (R-DRE-380320)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "20835237;23594743;26469318;27189481;27486776;30929901", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays a role in the establishment of cell polarity and epithelial lumen formation (PubMed:20835237). Also plays an essential role in ciliogenesis and subsequent Hedgehog signaling pathway that requires the presence of intact primary cilia for pathway activation. Mechanistically, interacts with and mediates RABEP2 centrosomal localization which is critical for ciliogenesis (By similarity)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0005814 centriole;GO:0070161 anchoring junction", "go_biological_process": "GO:0001764 neuron migration;GO:0030030 cell projection organization;GO:0007098 centrosome cycle;GO:0030010 establishment of cell polarity;GO:0035148 tube formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B8JK76-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q0P483-1", "uniprot_id": "S2542_DANRE", "mass": 35336.0, "length": 321, "protein_name": "Mitochondrial coenzyme A transporter SLC25A42", "gene_name": "slc25a42", "organism": "Zebrafish", "refseq_name": "mitochondrial coenzyme A transporter SLC25A42", "refseq_ac": "NP_001038918", "gene_names_uniprotkb": "slc25a42; CH1073-382C16.1; zgc:153304", "gene_names_refseq": "CH1073-382C16.1; slc25a42; zgc:153304", "protein_names_uniprotkb": "Mitochondrial coenzyme A transporter SLC25A42; Solute carrier family 25 member 42", "protein_names_refseq": "mitochondrial coenzyme A transporter SLC25A42", "tax_id": 7955, "disease": "Graves' disease (Disease Ontology:DOID:12361)", "pathway": " (dre:751743); (R-DRE-199220)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "26541337", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.2378864.1, SRR32588732.4110939.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476734, SAMEA4476756 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Jun 24, 2024 this sequence version replaced NP_001038918.1., [RefSeq]; Mitochondrial carrier mediating the transport of coenzyme A (CoA) in mitochondria in exchange for intramitochondrial (deoxy)adenine nucleotides and adenosine 3',5'-diphosphate., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0043262 ADP phosphatase activity;GO:0005347 ATP transmembrane transporter activity;GO:0015217 ADP transmembrane transporter activity;GO:0015228 coenzyme A transmembrane transporter activity;GO:0080122 AMP transmembrane transporter activity", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0015866 ADP transport;GO:0035349 coenzyme A transmembrane transport;GO:0080121 AMP transport;GO:0015867 ATP transport;GO:0007006 mitochondrial membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q0P483-1", "record_type": "protein" }, { "uniprot_canonical_ac": "A8T6P4-1", "uniprot_id": "MYRIP_DANRE", "mass": 96250.0, "length": 838, "protein_name": "Rab effector MyRIP", "gene_name": "myripb; myrip", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "myripb; myrip; SlaC2-c; akap2; myrip; si:dkey-12l12.1; si:dkey-189e1.3; si:dkey-189e1.4", "gene_names_refseq": "", "protein_names_uniprotkb": "Rab effector MyRIP; Exophilin-8; Myosin VIIa- and Rab-interacting protein; SlaC2-c; Slp homolog lacking C2 domains c; Synaptotagmin-like protein lacking C2 domains C", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:567049)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "17827149;23594743;27189481", "class_list": "", "function": "May link secretory vesicles to actin filaments (By similarity). May function as a protein kinase A-anchoring protein (AKAP). May act as a scaffolding protein that links PKA to components of the exocytosis machinery, thus facilitating exocytosis (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0003779 actin binding;GO:0008270 zinc ion binding;GO:0017022 myosin binding;GO:0031267 small GTPase binding", "go_cellular_component": "GO:0048471 perinuclear region of cytoplasm;GO:0030133 transport vesicle;GO:0030864 cortical actin cytoskeleton", "go_biological_process": "GO:0006886 intracellular protein transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A8T6P4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1QFU0-1", "uniprot_id": "TMC1_DANRE", "mass": 107497.0, "length": 935, "protein_name": "Transmembrane channel-like protein 1", "gene_name": "tmc1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "tmc1; si:229d2.1; si:dkey-229d2.1", "gene_names_refseq": "", "protein_names_uniprotkb": "Transmembrane channel-like protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 7 (Disease Ontology:DOID:0110520); autosomal dominant nonsyndromic deafness 36 (Disease Ontology:DOID:0110563); sensorineural hearing loss (Disease Ontology:DOID:10003)", "pathway": " (dre:567237)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "19478994;23594743;25114259;26048245;26469318;28534737;32371604;33490059;37628888;37952940;38035267", "class_list": "", "function": "Pore-forming subunit of the mechanotransducer (MET) non-selective cation channel complex located at the tips of hair-cell stereocilia (PubMed:25114259). Highly permeable to calcium and likely transports monovalent cations (By similarity)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A076V3V4;A2BFV3", "ec_number_list": "2.7.11.1;1.5.1.2", "go_molecular_function": "GO:0005262 calcium channel activity;GO:0008381 mechanosensitive monoatomic ion channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0032421 stereocilium bundle", "go_biological_process": "GO:0060005 vestibular reflex;GO:0050910 detection of mechanical stimulus involved in sensory perception of sound;GO:0071260 cellular response to mechanical stimulus", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "F1QFU0-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B0R061-1", "uniprot_id": "SMRDA_DANRE", "mass": 110346.0, "length": 972, "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A", "gene_name": "smarcad1a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "smarcad1a; si:ch211-247l22.2; smarcad1; wu:fi25c01; zgc:113183", "gene_names_refseq": "", "protein_names_uniprotkb": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A; 3.6.4.-", "protein_names_refseq": "", "tax_id": 7955, "disease": "asphyxiating thoracic dystrophy (Disease Ontology:DOID:0050592); BASAN syndrome (Disease Ontology:DOID:0080725); adermatoglyphia (Disease Ontology:DOID:0111357)", "pathway": " (dre:557875)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "23594743;24240475;25247677;25556858;26087843;26469318;27189481;34296799", "class_list": "", "function": "Protein that possesses intrinsic ATP-dependent nucleosome-remodeling activity and is both required for DNA repair and heterochromatin organization. Combines the ATP-dependent ability to exchange histones, with the chaperone-like ATP-independent activity to deposit histones and assemble nucleosomes. Promotes DNA end resection of double-strand breaks (DSBs) following DNA damage: probably acts by weakening histone DNA interactions in nucleosomes flanking DSBs. Required for the restoration of heterochromatin organization after replication., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.3.2.-;2.3.2.27;3.6.4.-;4.2.99.18;5.6.2.4;5.6.2.3;3.6.4.12;3.6.4.13;2.7.4.3;7.6.2.2;5.6.1.6;7.6.2.3;3.6.1.5;3.6.4.6;3.6.1.15;3.6.4.10;5.6.2.-;2.7.7.7;2.7.7.49;5.6.2.5;3.6.5.-;3.6.1.-", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin;GO:0035861 site of double-strand break;GO:0005694 chromosome", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0000729 DNA double-strand break processing;GO:0031507 heterochromatin formation;GO:0006281 DNA repair;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "B0R061-1", "record_type": "protein" }, { "uniprot_canonical_ac": "B0UYH6-1", "uniprot_id": "RPAP2_DANRE", "mass": 67549.0, "length": 601, "protein_name": "Putative RNA polymerase II subunit B1 CTD phosphatase rpap2", "gene_name": "rpap2", "organism": "Zebrafish", "refseq_name": "putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform 1", "refseq_ac": "NP_001264859", "gene_names_uniprotkb": "rpap2; im:7149428; si:dkey-63k7.3; wu:fc90e06; zgc:112291", "gene_names_refseq": "im:7149428; rpap2; wu:fc90e06; zgc:112291", "protein_names_uniprotkb": "Putative RNA polymerase II subunit B1 CTD phosphatase rpap2; 3.1.3.16; RNA polymerase II-associated protein 2", "protein_names_refseq": "putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform 1; putative RNA polymerase II subunit B1 CTD phosphatase rpap2", "tax_id": 7955, "disease": "", "pathway": " (dre:554138); (R-DRE-6807505)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "23594743;26116173;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01011653.1, GDQH01020748.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Protein phosphatase that displays CTD phosphatase activity and regulates transcription of snRNA genes. Recognizes and binds phosphorylated 'Ser-7' of the C-terminal heptapeptide repeat domain (CTD) of the largest RNA polymerase II subunit POLR2A, and mediates dephosphorylation of 'Ser-5' of the CTD, thereby promoting transcription of snRNA genes (By similarity). Downstream of EIF2AK3/PERK, dephosphorylates ERN1, a sensor for the endoplasmic reticulum unfolded protein response (UPR), to abort failed ER-stress adaptation and trigger apoptosis (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "3.1.3.16;3.1.3.48;2.7.7.6;3.1.3.67;3.1.3.27;2.7.4.3;3.1.27.-;2.7.11.22;2.7.11.23", "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0043175 RNA polymerase core enzyme binding;GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity", "go_cellular_component": "GO:0097550 transcription preinitiation complex;GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0009301 snRNA transcription;GO:0036499 PERK-mediated unfolded protein response", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0UYH6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q08BR4-1", "uniprot_id": "STB1B_DANRE", "mass": 135811.0, "length": 1216, "protein_name": "Histone-lysine N-methyltransferase SETDB1-B", "gene_name": "setdb1b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "setdb1b; im:7143091; wu:fa04a12; wu:fj80h02; zgc:152899", "gene_names_refseq": "", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase SETDB1-B; 2.1.1.366; SET domain bifurcated 1B", "protein_names_refseq": "", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); autistic disorder (Disease Ontology:DOID:12849); Huntington's disease (Disease Ontology:DOID:12858); lung cancer (Disease Ontology:DOID:1324); melanoma (Disease Ontology:DOID:1909); high grade glioma (Disease Ontology:DOID:3070); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (R-DRE-3214841); (R-DRE-9843940); (R-DRE-9843970)", "pathway_count": 3, "publication_count": 7, "publication_id_list": "15520368;18231586;24240475;30407522;30458291;30912647;36577070", "class_list": "", "function": "Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3 (H3K9me3). H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. Mainly functions in euchromatin regions, thereby playing a central role in the silencing of euchromatic genes. H3 'Lys-9' trimethylation is coordinated with DNA methylation. Plays a role in promoter hypermethylation and transcriptional silencing of tumor suppressor genes (TSGs) or other tumor-related genes. Also required to maintain a transcriptionally repressive state of genes in undifferentiated embryonic stem cells (ESCs). Associates at promoter regions of tumor suppressor genes (TSGs) leading to their gene silencing. Also catalyzes mono- and dimethylation of 'Lys-9' of free histone H3 (H3K9me1 and H3K9me2) during translation in the cytoplasm, which is then transported to the nucleus and incorporated into nucleosomes., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q06ZW4", "ec_number_list": "2.1.1.-;2.1.1.366;2.1.1.354", "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:1990841 promoter-specific chromatin binding;GO:0046974 histone H3K9 methyltransferase activity;GO:0062072 histone H3K9me2/3 reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000785 chromatin;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010629 negative regulation of gene expression;GO:0032259 methylation;GO:0006346 DNA methylation-dependent constitutive heterochromatin formation;GO:0070828 heterochromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q08BR4-1", "record_type": "protein" }, { "uniprot_canonical_ac": "Q1RLY6-1", "uniprot_id": "KMO_DANRE", "mass": 54247.0, "length": 474, "protein_name": "Kynurenine 3-monooxygenase", "gene_name": "kmo", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "kmo; KMO; cb362; zgc:136684", "gene_names_refseq": "", "protein_names_uniprotkb": "Kynurenine 3-monooxygenase; 1.14.13.9; Kynurenine 3-hydroxylase", "protein_names_refseq": "", "tax_id": 7955, "disease": "depressive disorder (Disease Ontology:DOID:1596); schizophrenia (Disease Ontology:DOID:5419); amino acid metabolic disorder (Disease Ontology:DOID:9252)", "pathway": " (dre:368242); (R-DRE-71240)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "23947337;26469318;27020856", "class_list": "", "function": "Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid, a neurotoxic NMDA receptor antagonist and potential endogenous inhibitor of NMDA receptor signaling in axonal targeting, synaptogenesis and apoptosis during brain development. Quinolinic acid may also affect NMDA receptor signaling in pancreatic beta cells, osteoblasts, myocardial cells, and the gastrointestinal tract., [UniProtKB, UniProtKB, UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "1.14.13.9", "go_molecular_function": "GO:0071949 FAD binding;GO:0004502 kynurenine 3-monooxygenase activity", "go_cellular_component": "GO:0005741 mitochondrial outer membrane", "go_biological_process": "GO:0001878 response to yeast;GO:0006569 L-tryptophan catabolic process;GO:0070189 kynurenine metabolic process;GO:0019674 NAD+ metabolic process;GO:0019805 quinolinate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1RLY6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "F1RCR6-1", "uniprot_id": "TRIPC_DANRE", "mass": 223044.0, "length": 2026, "protein_name": "E3 ubiquitin-protein ligase TRIP12", "gene_name": "trip12", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "trip12; im:7149446; si:ch211-272f3.4", "gene_names_refseq": "", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase TRIP12; 2.3.2.26; HECT-type E3 ubiquitin transferase TRIP12; TR-interacting protein 12; TRIP-12; Thyroid receptor-interacting protein 12", "protein_names_refseq": "", "tax_id": 7955, "disease": "Clark-Baraitser syndrome (Disease Ontology:DOID:0080234); cancer (Disease Ontology:DOID:162)", "pathway": " (dre:564866); (R-DRE-983168)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "23594743;28252024;35929537;40044042", "class_list": "", "function": "E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardless of the presence of lysine residues in target proteins., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A3KPN5", "ec_number_list": "2.3.2.-;2.3.2.27;3.6.4.-;2.3.2.34;2.3.2.26;6.2.1.45;2.3.2.31;2.3.2.23;3.4.19.12;2.3.2.25", "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0016607 nuclear speck", "go_biological_process": "GO:0006281 DNA repair;GO:0006974 DNA damage response;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0000209 protein polyubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "F1RCR6-1", "record_type": "protein" }, { "uniprot_canonical_ac": "P79742-1", "uniprot_id": "TBX6L_DANRE", "mass": 53477.0, "length": 473, "protein_name": "T-box transcription factor TBX6L", "gene_name": "tbx16l; tbx6l", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": "", "gene_names_uniprotkb": "tbx16l; tbx6l; ZF-TBX6; cb123; etID309793.5; sb:cb123; tbx6l; tbx6; z.TBX6", "gene_names_refseq": "", "protein_names_uniprotkb": "T-box transcription factor TBX6L; T-box protein 6L; T-box protein 6; T-box transcription factor TBX6", "protein_names_refseq": "", "tax_id": 7955, "disease": "spondylocostal dysostosis 5 (Disease Ontology:DOID:0112363)", "pathway": " (dre:30254)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10207156;10331981;10491258;31330852;32345657;32934222;35132142;37968389;9119115;9503012;9693141", "class_list": "", "function": "Probable transcriptional regulator involved in developmental processes., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "", "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0001708 cell fate specification;GO:0048341 paraxial mesoderm formation;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P79742-1", "record_type": "protein" }, { "uniprot_canonical_ac": "E7F1C4-1", "uniprot_id": "SMRDB_DANRE", "mass": 108122.0, "length": 954, "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B", "gene_name": "smarcad1b", "organism": "Zebrafish", "refseq_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b", "refseq_ac": "NP_001340797", "gene_names_uniprotkb": "smarcad1b; si:dkey-76p7.6", "gene_names_refseq": "si:dkey-76p7.6; smarcad1b", "protein_names_uniprotkb": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B; 3.6.4.-", "protein_names_refseq": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b; SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 b", "tax_id": 7955, "disease": "asphyxiating thoracic dystrophy (Disease Ontology:DOID:0050592); BASAN syndrome (Disease Ontology:DOID:0080725); adermatoglyphia (Disease Ontology:DOID:0111357)", "pathway": " (dre:563175)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "23594743;24240475;25556858;26469318;27189481;34296799", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01039062.1, SRR26395014.450904.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jul 27, 2017 this sequence version replaced XP_009303506.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Protein that possesses intrinsic ATP-dependent nucleosome-remodeling activity and is both required for DNA repair and heterochromatin organization. Combines the ATP-dependent ability to exchange histones, with the chaperone-like ATP-independent activity to deposit histones and assemble nucleosomes. Promotes DNA end resection of double-strand breaks (DSBs) following DNA damage: probably acts by weakening histone DNA interactions in nucleosomes flanking DSBs. Required for the restoration of heterochromatin organization after replication., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": "2.3.2.-;2.3.2.27;3.6.4.-;4.2.99.18;5.6.2.4;5.6.2.3;3.6.4.12;3.6.4.13;2.7.4.3;7.6.2.2;5.6.1.6;7.6.2.3;3.6.1.5;3.6.4.6;3.6.1.15;3.6.4.10;5.6.2.-;2.7.7.7;2.7.7.49;5.6.2.5;3.6.5.-;3.6.1.-", "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin;GO:0035861 site of double-strand break;GO:0005694 chromosome", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0000729 DNA double-strand break processing;GO:0031507 heterochromatin formation;GO:0006281 DNA repair;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "E7F1C4-1", "record_type": "protein" } ]