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"id": "GO:0009408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009408", "evidence": [ { "database": "UniProtKB", "id": "Q9FK72", "url": "https://www.uniprot.org/uniprotkb/Q9FK72" } ], "pmid": "" }, { "name": "response to auxin", "id": "GO:0009733", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009733", "evidence": [ { "database": "UniProtKB", "id": "Q9FK72", "url": "https://www.uniprot.org/uniprotkb/Q9FK72" } ], "pmid": "" }, { "name": "positive gravitropism", "id": "GO:0009958", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009958", "evidence": [ { "database": "UniProtKB", "id": "Q9FK72", "url": "https://www.uniprot.org/uniprotkb/Q9FK72" } ], "pmid": "" }, { "name": "root development", "id": "GO:0048364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048364", "evidence": [ { "database": "UniProtKB", "id": "Q9FK72", "url": "https://www.uniprot.org/uniprotkb/Q9FK72" } ], "pmid": "" }, { "name": "lateral root development", "id": "GO:0048527", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048527", "evidence": [ { "database": "UniProtKB", "id": "Q9FK72", "url": "https://www.uniprot.org/uniprotkb/Q9FK72" } ], "pmid": "" }, { "name": "fruit morphogenesis", "id": "GO:0048530", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048530", "evidence": [ { "database": "UniProtKB", "id": "Q9FK72", "url": "https://www.uniprot.org/uniprotkb/Q9FK72" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "Q9FK72-1" }, { "uniprot_canonical_ac": "Q682V0-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 264, "chemical_mass": 29854.0, "gene_names": "XRCC4;MXC7.14;XRCC4;homolog of X-ray repair cross complementing 4;homolog of human DNA ligase iv-binding protein XRCC4", "protein_name": "DNA repair protein XRCC4", "disease": [], "cellular_component": [ { "name": "DNA ligase IV complex", "id": "GO:0032807", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032807", "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "pmid": "" }, { "name": "DNA-dependent protein kinase-DNA ligase 4 complex", "id": "GO:0005958", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005958", "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "pmid": "" } ], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA recombination", "id": "GO:0006310", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006310", "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "pmid": "" }, { "name": "double-strand break repair via nonhomologous end joining", "id": "GO:0006303", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006303", "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "pmid": "" }, { "name": "response to X-ray", "id": "GO:0010165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010165", "evidence": [ { "database": "UniProtKB", "id": "Q682V0", "url": "https://www.uniprot.org/uniprotkb/Q682V0" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q682V0-1", "start_pos": "225", "end_pos": "225", "site_lbl": "Ser225", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q682V0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q682V0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q682V0-1", "start_pos": "226", "end_pos": "226", "site_lbl": "Thr226", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q682V0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q682V0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q682V0-1", "start_pos": "231", "end_pos": "231", "site_lbl": "Ser231", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q682V0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q682V0" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "Q682V0-1", "start_pos": "237", "end_pos": "237", "site_lbl": "Ser237", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q682V0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q682V0" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] } ], "record_id": "Q682V0-1" }, { "uniprot_canonical_ac": "Q6LA42-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 558, "chemical_mass": 62301.0, "gene_names": "APRR5;APRR5;PRR5;T31K7.5;T31K7_5;pseudo-response regulator 5", "protein_name": "Two-component response regulator-like APRR5", "disease": [], "molecular_function": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" } ], "cellular_component": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" } ], "biological_process": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated transcription", "id": "GO:0045892", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045892", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "import into nucleus", "id": "GO:0051170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051170", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "circadian rhythm", "id": "GO:0007623", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007623", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "phosphorelay signal transduction system", "id": "GO:0000160", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000160", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "response to red light", "id": "GO:0010114", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010114", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "cytokinin-activated signaling pathway", "id": "GO:0009736", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009736", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "photomorphogenesis", "id": "GO:0009640", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009640", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" }, { "name": "response to far red light", "id": "GO:0010218", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010218", "evidence": [ { "database": "UniProtKB", "id": "Q6LA42", "url": "https://www.uniprot.org/uniprotkb/Q6LA42" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q6LA42-1", "start_pos": "405", "end_pos": "405", "site_lbl": "Thr405", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 405, "start_aa": "Thr", "end_pos": 405, "end_aa": "Thr", "residue": "Thr", 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"Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 271, "chemical_mass": 29624.0, "gene_names": "ABCI10;ABCI10;ATNAP13;ATP-binding cassette I10;EMB2751;F17M5.220;F17M5_220;NAP13;embryo defective 2751", "protein_name": "ABC transporter I family member 10", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q8H1R4", "url": "https://www.uniprot.org/uniprotkb/Q8H1R4" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "Q8H1R4", "url": "https://www.uniprot.org/uniprotkb/Q8H1R4" } ], "pmid": "" } ], "biological_process": [ { "name": "transmembrane transport", "id": "GO:0055085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055085", "evidence": [ { "database": 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"https://www.uniprot.org/uniprotkb/Q94AN2" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q94AN2", "url": "https://www.uniprot.org/uniprotkb/Q94AN2" } ], "pmid": "" }, { "name": "phragmoplast", "id": "GO:0009524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009524", "evidence": [ { "database": "UniProtKB", "id": "Q94AN2", "url": "https://www.uniprot.org/uniprotkb/Q94AN2" } ], "pmid": "" }, { "name": "plant-type vacuole membrane", "id": "GO:0009705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009705", "evidence": [ { "database": "UniProtKB", "id": "Q94AN2", "url": "https://www.uniprot.org/uniprotkb/Q94AN2" } ], "pmid": "" }, { "name": "secondary plasmodesma", "id": "GO:0009551", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009551", "evidence": [ { "database": "UniProtKB", "id": "Q94AN2", "url": "https://www.uniprot.org/uniprotkb/Q94AN2" } ], "pmid": "" }, { 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}, { "uniprot_canonical_ac": "Q94AN2-1", "start_pos": "403", "end_pos": "403", "site_lbl": "Asn403", "weight": 0.0, "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 403, "start_aa": "Asn", "end_pos": 403, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn403", "evidence": [ { "id": "Q94AN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AN2#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ] } ] }, { "uniprot_canonical_ac": "Q94AN2-1", "start_pos": "247", "end_pos": "247", "site_lbl": "Gly247", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "E", "comment": "In cher1-5 and sic1; impaired secondary plasmodesmata (PD) 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"binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q94AP3-1", "start_pos": "372", "end_pos": "372", "site_lbl": "Ser372", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q94AP3", "url": "https://www.uniprot.org/uniprotkb/Q94AP3" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "iPTMnet", "id": "Q94AP3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q94AP3" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] } ] } ], "record_id": "Q94AP3-1" }, { "uniprot_canonical_ac": "Q94AR8-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94AR8", "url": "https://www.uniprot.org/uniprotkb/Q94AR8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", 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"gene_names": "PUKI;F13F21.22;F13F21_22", "protein_name": "Pseudouridine kinase", "disease": [], "molecular_function": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q94AT3", "url": "https://www.uniprot.org/uniprotkb/Q94AT3" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q94AT3", "url": "https://www.uniprot.org/uniprotkb/Q94AT3" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "Q94AT3", "url": "https://www.uniprot.org/uniprotkb/Q94AT3" } ], "pmid": "" }, { "name": "pseudouridine kinase activity", "id": "GO:0050225", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050225", "evidence": [ { "database": "UniProtKB", "id": "Q94AT3", "url": 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"database": "PubMed", "id": "33290549", "url": "https://glygen.org/publication/PubMed/33290549" } ] } ] }, { "uniprot_canonical_ac": "Q94AT3-1", "start_pos": "298", "end_pos": "298", "site_lbl": "Thr298", "weight": 0.0, "mutagenesis": [ { "sequence_org": "T", "sequence_mut": "A", "comment": "Reduces kinase activity 2-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q94AT3", "url": "https://www.uniprot.org/uniprotkb/Q94AT3" }, { "database": "PubMed", "id": "33290549", "url": "https://glygen.org/publication/PubMed/33290549" } ] }, { "sequence_org": "T", "sequence_mut": "V", "comment": "No effect on kinase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q94AT3", "url": "https://www.uniprot.org/uniprotkb/Q94AT3" }, { "database": "PubMed", "id": "33290549", "url": "https://glygen.org/publication/PubMed/33290549" } ] } ] }, { "uniprot_canonical_ac": "Q94AT3-1", "start_pos": "303", "end_pos": "303", "site_lbl": "Val303", "weight": 0.0, "mutagenesis": [ { "sequence_org": 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"chemical_mass": 25332.0, "gene_names": "SEC221;ATSEC22;F12F1.27;F12F1_27;SEC22;SECRETION 22", "protein_name": "25.3 kDa vesicle transport protein SEC22-1", "disease": [], "cellular_component": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "Q94AU2", "url": "https://www.uniprot.org/uniprotkb/Q94AU2" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q94AU2", "url": "https://www.uniprot.org/uniprotkb/Q94AU2" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q94AU2", "url": "https://www.uniprot.org/uniprotkb/Q94AU2" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": 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"" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "Q9LFP1", "url": "https://www.uniprot.org/uniprotkb/Q9LFP1" } ], "pmid": "" } ], "biological_process": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "Q9LFP1", "url": "https://www.uniprot.org/uniprotkb/Q9LFP1" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "Q9LFP1", "url": "https://www.uniprot.org/uniprotkb/Q9LFP1" } ], "pmid": "" }, { "name": "response to salt stress", "id": "GO:0009651", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009651", "evidence": [ { "database": "UniProtKB", "id": "Q9LFP1", "url": "https://www.uniprot.org/uniprotkb/Q9LFP1" } ], "pmid": "" } ], "binding_glycans": [], 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"id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] } ] }, { "uniprot_canonical_ac": "Q9LNE6-1", "start_pos": "148", "end_pos": "148", "site_lbl": "Ile148", "weight": 0.0, "mutagenesis": [ { "sequence_org": "I", "sequence_mut": "A", "comment": "Reduces catalytic activity 4.3-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" } ] }, { "sequence_org": "I", "sequence_mut": "S", "comment": "Reduces catalytic activity 4.3-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" } ] } ] }, { "uniprot_canonical_ac": "Q9LNE6-1", "start_pos": "163", "end_pos": "163", "site_lbl": "Ser163", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Slight decrease in catalytic activity.", "evidence": [ { "database": "UniProtKB", 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"30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] }, { "sequence_org": "H", "sequence_mut": "N", "comment": "Reduces catalytic activity 5.4-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] } ] }, { "uniprot_canonical_ac": "Q9LNE6-1", "start_pos": "335", "end_pos": "335", "site_lbl": "Trp335", "weight": 0.0, "mutagenesis": [ { "sequence_org": "W", "sequence_mut": "A", "comment": "Reduces catalytic activity 6.5-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] } ] }, { "uniprot_canonical_ac": "Q9LNE6-1", "start_pos": "336", "end_pos": "336", "site_lbl": "Gly336", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "N", "comment": "Slight decrease in catalytic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] } ] }, { "uniprot_canonical_ac": "Q9LNE6-1", "start_pos": "354", "end_pos": "354", "site_lbl": "Gln354", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Q", "sequence_mut": "A", "comment": "Reduces catalytic activity 2.2-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" } ] } ] }, { "uniprot_canonical_ac": "Q9LNE6-1", "start_pos": "356", "end_pos": "356", "site_lbl": "Asp356", "weight": 0.0, "mutagenesis": [ { "sequence_org": "D", "sequence_mut": "A", "comment": "Complete loss of catalytic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] } ] }, { "uniprot_canonical_ac": "Q9LNE6-1", "start_pos": "357", "end_pos": "357", "site_lbl": "His357", "weight": 0.0, "mutagenesis": [ { "sequence_org": "H", "sequence_mut": "A", "comment": "No effect on catalytic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] }, { "sequence_org": "H", "sequence_mut": "Q", "comment": "No effect on catalytic activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] } ] }, { "uniprot_canonical_ac": "Q9LNE6-1", "start_pos": "88", "end_pos": "88", "site_lbl": "Leu88", "weight": 0.0, "mutagenesis": [ { "sequence_org": "L", "sequence_mut": "A", "comment": "Reduces catalytic activity 1.6-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] }, { "sequence_org": "L", "sequence_mut": "G", "comment": "Reduces catalytic activity 1.6-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] }, { "sequence_org": "L", "sequence_mut": "S", "comment": "Reduces catalytic activity 1.6-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q9LNE6", "url": "https://www.uniprot.org/uniprotkb/Q9LNE6" }, { "database": "PubMed", "id": "30893500", "url": "https://glygen.org/publication/PubMed/30893500" } ] } ] } ], "record_id": "Q9LNE6-1" }, { "uniprot_canonical_ac": "Q9LNE8-1", "species": [ { "name": "Arabidopsis 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], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 711, "chemical_mass": 81895.0, "gene_names": "CNGC10;ACBK1;ATCNGC10;CNGC10;F6F3.13;F6F3_13;cyclic nucleotide gated channel 10", "protein_name": "Probable cyclic nucleotide-gated ion channel 10", "disease": [], "molecular_function": [ { "name": "monoatomic ion channel activity", "id": "GO:0005216", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005216", "evidence": [ { "database": "UniProtKB", "id": "Q9LNJ0", "url": "https://www.uniprot.org/uniprotkb/Q9LNJ0" } ], "pmid": "" }, { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "Q9LNJ0", "url": "https://www.uniprot.org/uniprotkb/Q9LNJ0" } ], "pmid": "" }, { "name": "cAMP binding", "id": "GO:0030552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030552", "evidence": [ { "database": "UniProtKB", "id": 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}, { "database": "iPTMnet", "id": "Q9XIE2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIE2" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9XIE2-1", "start_pos": "844", "end_pos": "844", "site_lbl": "Ser844", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9XIE2", "url": "https://www.uniprot.org/uniprotkb/Q9XIE2" }, { "database": "PubMed", "id": "28910579", "url": "https://glygen.org/publication/PubMed/28910579" }, { "database": "iPTMnet", "id": "Q9XIE2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIE2" }, { "database": "PubMed", "id": "15308754", "url": "https://glygen.org/publication/PubMed/15308754" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ], "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "A", "comment": "Normal resistance against Blumeria graminis and translocation to the host-pathogen interface.", "evidence": [ { "database": "UniProtKB", "id": "Q9XIE2", "url": "https://www.uniprot.org/uniprotkb/Q9XIE2" }, { "database": "PubMed", "id": "28910579", "url": "https://glygen.org/publication/PubMed/28910579" } ] } ] }, { "uniprot_canonical_ac": "Q9XIE2-1", "start_pos": "849", "end_pos": "849", "site_lbl": "Ser849", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XIE2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIE2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "Q9XIE2-1", "start_pos": "960", "end_pos": "960", "site_lbl": "Thr960", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XIE2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIE2" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] } ] }, { "uniprot_canonical_ac": "Q9XIE2-1", "start_pos": "1357", "end_pos": "1357", "site_lbl": "Ala1357", "weight": 0.0, "mutagenesis": [ { "sequence_org": "A", "sequence_mut": "V", "comment": "In pdr8-115 and pen3-6; slight overaccumulation in leaves of 4-O-beta-D-glucosyl-indol-3-yl formamide (4OGlcI3F) upon Blumeria graminis conidiospore inoculation, a pathogen-inducible tryptophan-derived compound, which biosynthesis is dependent on the PEN2 metabolic pathway. Hypersensitivity to root growth inhibition by 2,4-dichlorophenoxybutyric acid (2,4-DB), an analog of indole 3-butyric acid (IBA), an auxin precursor. Fully defective in preinvasive defense to nonadapted powdery mildews (e.g. Blumeria graminis and Erysiphe pisi). Normal susceptibility to the host-adapted pathogen Golovinomyces orontii associated with normal salicylic acid (SA), and pathogen-inducible hydrogen peroxides levels. Retained microbe-associated molecular patterns (MAMPs)-induced (e.g. flg22) callose deposition. Suppressor of a subset of ibr5 mutant phenotypes including IBA sensitivity but without suppressing ibr5 resistance to indole-3-acetic acid (IAA). Normal accumulation (at protein level).", "evidence": [ { "database": "UniProtKB", "id": "Q9XIE2", "url": "https://www.uniprot.org/uniprotkb/Q9XIE2" }, { "database": "PubMed", "id": "26023163", "url": "https://glygen.org/publication/PubMed/26023163" }, { "database": "PubMed", "id": "19648296", "url": "https://glygen.org/publication/PubMed/19648296" } ] } ] }, { "uniprot_canonical_ac": "Q9XIE2-1", "start_pos": "354", "end_pos": "354", "site_lbl": "Gly354", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "D", "comment": "In pen3-1; overaccumulation in leaves of 4-O-beta-D-glucosyl-indol-3-yl formamide (4OGlcI3F) upon Blumeria graminis conidiospore inoculation, a pathogen-inducible tryptophan-derived compound, which biosynthesis is dependent on the PEN2 metabolic pathway. More susceptible to the necrotrophic pathogen Plectosphaerella cucumerina, with higher frequency of fungal penetration and increased formation of elongating secondary hyphae after the first haustorium development. Fully defective in preinvasive defense to nonadapted powdery mildews (e.g. Blumeria graminis and Erysiphe pisi). Extensive leaf chlorosis and reduced fungal growth upon infection by the host-adapted pathogen Golovinomyces orontii associated with a hyperaccumulation of both free and total salicylic acid (SA) as well as pathogen-inducible hydrogen peroxides in leaves. Impaired microbe-associated molecular patterns (MAMPs)-induced (e.g. flg22) callose deposition. Hypersensitivity to root growth inhibition by indole 3-butyric acid (IBA), an auxin precursor. Reduced accumulation (at protein level).", "evidence": [ { "database": "UniProtKB", "id": "Q9XIE2", "url": "https://www.uniprot.org/uniprotkb/Q9XIE2" }, { "database": "PubMed", "id": "26023163", "url": "https://glygen.org/publication/PubMed/26023163" }, { "database": "PubMed", "id": "16473969", "url": "https://glygen.org/publication/PubMed/16473969" } ] } ] }, { "uniprot_canonical_ac": "Q9XIE2-1", "start_pos": "704", "end_pos": "704", "site_lbl": "Leu704", "weight": 0.0, "mutagenesis": [ { "sequence_org": "L", "sequence_mut": "F", "comment": "In pen3-5; slight overaccumulation in leaves of 4-O-beta-D-glucosyl-indol-3-yl formamide (4OGlcI3F) upon Blumeria graminis conidiospore inoculation, a pathogen-inducible tryptophan-derived compound, which biosynthesis is dependent on the PEN2 metabolic pathway. Fully defective in preinvasive defense to nonadapted powdery mildews (e.g. Blumeria graminis and Erysiphe pisi). Normal susceptibility to the host-adapted pathogen Golovinomyces orontii associated with normal salicylic acid (SA) pathogen-inducible hydrogen peroxides levels. Retained microbe-associated molecular patterns (MAMPs)-induced (e.g. flg22) callose deposition. Increased susceptibility to the necrotrophic pathogen Plectosphaerella cucumerina. Enhancer mutation of the mutant pen2-dependent invasive growth of Blumeria graminis. Normal insensitivity to indole-3-butyric acid (IBA), an auxin precursor. Normal accumulation (at protein level).", "evidence": [ { "database": "UniProtKB", "id": "Q9XIE2", "url": "https://www.uniprot.org/uniprotkb/Q9XIE2" }, { "database": "PubMed", "id": "26023163", "url": "https://glygen.org/publication/PubMed/26023163" } ] } ] }, { "uniprot_canonical_ac": "Q9XIE2-1", "start_pos": "915", "end_pos": "915", "site_lbl": "Gly915", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "S", "comment": "In pen3-2; overaccumulation in leaves of 4-O-beta-D-glucosyl-indol-3-yl formamide (4OGlcI3F) upon Blumeria graminis conidiospore inoculation, a pathogen-inducible tryptophan-derived compound, which biosynthesis is dependent on the PEN2 metabolic pathway. More susceptible to the necrotrophic pathogen P.cucumerina, with higher frequency of fungal penetration and increased formation of elongating secondary hyphae after the first haustorium development. Fully defective in preinvasive defense to nonadapted powdery mildews (e.g. Blumeria graminis and Erysiphe pisi). Extensive leaf chlorosis and reduced fungal growth upon infection by the host-adapted pathogen Golovinomyces orontii associated with an hyperaccumulation of both free and total salicylic acid (SA) as well as pathogen-inducible hydrogen peroxides in leaves. Impaired microbe-associated molecular patterns (MAMPs)-induced (e.g. flg22) callose deposition. Hypersensitivity to root growth inhibition by indole 3-butyric acid (IBA), an auxin precursor. Reduced accumulation (at protein level).", "evidence": [ { "database": "UniProtKB", "id": "Q9XIE2", "url": "https://www.uniprot.org/uniprotkb/Q9XIE2" }, { "database": "PubMed", "id": "26023163", "url": "https://glygen.org/publication/PubMed/26023163" }, { "database": "PubMed", "id": "16473969", "url": "https://glygen.org/publication/PubMed/16473969" } ] } ] } ], "record_id": "Q9XIE2-1" }, { "uniprot_canonical_ac": "Q9XII1-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 307, "chemical_mass": 33641.0, "gene_names": "PDV2;F7H1.9;F7H1_9;PD116;PDV2;PLASTID DIVISION2", "protein_name": "Plastid division protein PDV2", "disease": [], "cellular_component": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" } ], "pmid": "" }, { "name": "plastid", "id": "GO:0009536", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009536", "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" } ], "pmid": "" }, { "name": "chloroplast outer membrane", "id": "GO:0009707", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009707", "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" } ], "pmid": "" } ], "molecular_function": [ { "name": "phosphatidylinositol-4-phosphate binding", "id": "GO:0070273", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070273", "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" } ], "pmid": "" } ], "biological_process": [ { "name": "response to gibberellin", "id": "GO:0009739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009739", "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" } ], "pmid": "" }, { "name": "chloroplast fission", "id": "GO:0010020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010020", "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "188", "end_pos": "188", "site_lbl": "Ser188", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XII1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XII1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] } ] }, { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "199", "end_pos": "199", "site_lbl": "Ser199", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XII1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XII1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "204", "end_pos": "204", "site_lbl": "Ser204", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XII1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XII1" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ] }, { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "33", "end_pos": "33", "site_lbl": "Ser33", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XII1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XII1" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] } ] }, { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "50", "end_pos": "50", "site_lbl": "Ser50", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "iPTMnet", "id": "Q9XII1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XII1" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" } ] } ] }, { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "62", "end_pos": "62", "site_lbl": "Ser62", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XII1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XII1" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] } ] }, { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "64", "end_pos": "64", "site_lbl": "Ser64", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XII1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XII1" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": 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"PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ] }, { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "288", "end_pos": "288", "site_lbl": "Arg288", "weight": 0.0, "mutagenesis": [ { "sequence_org": "R", "sequence_mut": "K", "comment": "In pdv2-4; impaired interaction with PDV2 leading to altered chloroplast division and fewer but larger chloroplasts.", "evidence": [ { "database": "UniProtKB", "id": "Q9XII1", "url": "https://www.uniprot.org/uniprotkb/Q9XII1" }, { "database": "PubMed", "id": "28248291", "url": "https://glygen.org/publication/PubMed/28248291" } ] } ] }, { "uniprot_canonical_ac": "Q9XII1-1", "start_pos": "307", "end_pos": "307", "site_lbl": "Gly307", "weight": 0.0, "mutagenesis": [ { "sequence_org": "G", "sequence_mut": "D", "comment": "Impaired ARC6 interaction, and reduced number of constricted and large chloroplasts.", 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Causes severe dwarfism and seedlings death.", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRE2", "url": "https://www.uniprot.org/uniprotkb/Q9ZRE2" }, { "database": "PubMed", "id": "19789181", "url": "https://glygen.org/publication/PubMed/19789181" } ] } ] }, { "uniprot_canonical_ac": "Q9ZRE2-1", "start_pos": "22", "end_pos": "22", "site_lbl": "Ser22", "weight": 0.0, "mutagenesis": [ { "sequence_org": "S", "sequence_mut": "N", "comment": "Dominant negative (GDP-bound form); no effect on trafficking between the ER and Golgi.", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRE2", "url": "https://www.uniprot.org/uniprotkb/Q9ZRE2" }, { "database": "PubMed", "id": "19789181", "url": "https://glygen.org/publication/PubMed/19789181" } ] } ] }, { "uniprot_canonical_ac": "Q9ZRE2-1", "start_pos": "67", "end_pos": "67", "site_lbl": "Gln67", "weight": 0.0, "mutagenesis": [ { "sequence_org": "Q", "sequence_mut": "L", "comment": "No effect on trafficking between the ER and Golgi.", "evidence": [ { "database": "UniProtKB", "id": "Q9ZRE2", "url": "https://www.uniprot.org/uniprotkb/Q9ZRE2" }, { "database": "PubMed", "id": "19789181", "url": "https://glygen.org/publication/PubMed/19789181" } ] } ] } ], "record_id": "Q9ZRE2-1" }, { "uniprot_canonical_ac": "Q9ZSA2-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 531, "chemical_mass": 59894.0, "gene_names": "CPK21;AtCPK21;CPK21;T4B21.13;T4B21_13;calcium-dependent protein kinase 21", "protein_name": "Calcium-dependent protein kinase 21", "disease": [], "molecular_function": [ { "name": "calcium-dependent protein serine/threonine kinase activity", "id": "GO:0009931", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009931", "evidence": [ { "database": "UniProtKB", "id": 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} ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA2" } ], "pmid": "" }, { "name": "plasmodesma", "id": "GO:0009506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009506", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA2" } ], "pmid": "" } ], "biological_process": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA2" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [ { "uniprot_canonical_ac": "Q9ZSA2-1", "start_pos": "244", "end_pos": "244", "site_lbl": "Ser244", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA2", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA2" } ] } ] }, { "uniprot_canonical_ac": "Q9ZSA2-1", "start_pos": "27", "end_pos": "27", "site_lbl": "Thr27", "weight": 0.0, "phosphorylation": [ { "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZSA2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZSA2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] } ] }, { 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[ { "database": "UniProtKB", "id": "Q9ZSA8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 349, "chemical_mass": 39234.0, "gene_names": "DLO1;DLO1;DMR6-LIKE OXYGENASE 1;F3H7.16;F7L13.80;F7L13_80;SAG108", "protein_name": "Protein DMR6-LIKE OXYGENASE 1", "disease": [], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA8" } ], "pmid": "" }, { "name": "dioxygenase activity", "id": "GO:0051213", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051213", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSA8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSA8" } ], "pmid": "" } ], "biological_process": [ { "name": "response to bacterium", "id": "GO:0009617", "url": 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"uniprot_canonical_ac": "Q9ZT84-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZT84", "url": "https://www.uniprot.org/uniprotkb/Q9ZT84" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "length": 347, "chemical_mass": 38782.0, "gene_names": "GA3OX2;ARABIDOPSIS THALIANA GIBBERELLIN-3-OXIDASE 2;ATGA3OX2;F5I6.9;F5I6_9;GA3OX2;GA4H;GIBBERELLIN 3 BETA-HYDROXYLASE;gibberellin 3-oxidase 2", "protein_name": "Gibberellin 3-beta-dioxygenase 2", "disease": [], "molecular_function": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q9ZT84", "url": "https://www.uniprot.org/uniprotkb/Q9ZT84" } ], "pmid": "" }, { "name": "gibberellin 3-beta-dioxygenase activity", "id": "GO:0016707", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016707", "evidence": [ { 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"database": "UniProtKB", "id": "Q9ZT84", "url": "https://www.uniprot.org/uniprotkb/Q9ZT84" } ], "pmid": "" }, { "name": "seed germination", "id": "GO:0009845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009845", "evidence": [ { "database": "UniProtKB", "id": "Q9ZT84", "url": "https://www.uniprot.org/uniprotkb/Q9ZT84" } ], "pmid": "" } ], "cellular_component": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9ZT84", "url": "https://www.uniprot.org/uniprotkb/Q9ZT84" } ], "pmid": "" } ], "binding_glycans": [], "biomarkers": [], "sites": [], "record_id": "Q9ZT84-1" }, { "uniprot_canonical_ac": "Q9ZTC3-1", "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZTC3", "url": "https://www.uniprot.org/uniprotkb/Q9ZTC3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana 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