{
    "bcoid": "GLY_001734",
    "title": "GlyGen-CFDE Glycans and Glycoenzymes Submission",
    "description": "The GlyGen-CFDE Glycans and Glycoenzymes Submission dataset contains Homo sapiens [taxid:9606] glycans ...",
    "filename_list": "glygen_glycan_synthesizing_enzymes.gmt",
    "filename": "glygen_glycan_synthesizing_enzymes.gmt",
    "filetype": "gmt",
    "categories": {
        "molecule": [
            "Glycan"
        ],
        "tag": [
            "GlyGen-CFDE Glycans and Glycoenzymes"
        ],
        "file_type": [
            "gmt"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "others"
        ]
    },
    "iconfilename": "gmt_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>Please implement service for gmt preview!</pre>"
    },
    "readme": "Name\n   - GlyGen-CFDE Glycans and Glycoenzymes Submission\n\nVersion\n   - v-2.12.1\n\nModified on\n   - 2026-08-25T11:56:48.117Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The GlyGen-CFDE Glycans and Glycoenzymes Submission dataset contains Homo sapiens [taxid:9606] glycans and their glycan synthesizing enzymes identified in GlyGen. The dataset is formatted as a XMT file for gene sets, i.e. '.gmt', for submission to the CFDE Workbench Metadata & Processed Data Matrix. If you use this dataset please provide proper attribution to GlyGen and CFDE.\n\nDescription Domain\n   Keywords\n   - CFDE\n   - GlyGen\n   - Glycans\n   - Glycosyltransferases\n   - Glycohydrolases\n   - Glycoenzymes\n   - Enzymes\n   - crossreferences\n\n   Pipeline Steps\n   - Step-1: The script maps fully-defined glycans to their synthesizing enzymes gene names, and formats the dataset into a gmt (XMT) format.\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-species-agnostic-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Output Subdomain\n      Name: glygen_glycan_synthesizing_enzymes.gmt\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/glygen_glycan_synthesizing_enzymes.gmt\n      Name: glygen_glycan_synthesizing_enzymes.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/glygen_glycan_synthesizing_enzymes.stat.csv\n\nFields\n      Name: \"misc_field\"\n     Description: \"Misc field type\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/glygen_glycan_synthesizing_enzymes.gmt"
}