{
    "bcoid": "GLY_001589",
    "title": "Ebola (BDBV) Protein Information (NCBI RefSeq)",
    "description": "The Ebola (BDBV) Protein Information (NCBI RefSeq) dataset contains Bundibugyo virus [taxid:565995] protein ...",
    "filename_list": "bdbv_protein_info_refseq.csv",
    "filename": "bdbv_protein_info_refseq.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Bundibugyo virus"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Protein Information"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "annotation"
        ]
    },
    "minitable": {
        "content": [
            [
                "B8XCM7-1...",
                "YP_003815432..."
            ],
            [
                "B8XCM8-1...",
                "YP_003815433..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "p_refseq_ac_..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "p_refseq_ac_best_match"
                },
                {
                    "type": "string",
                    "label": "refseq_protein_name"
                },
                {
                    "type": "string",
                    "label": "refseq_protein_length"
                },
                {
                    "type": "string",
                    "label": "refseq_protein_summary"
                }
            ],
            [
                "B8XCM7-1",
                "YP_003815432",
                "nucleoprotein",
                "739",
                ""
            ],
            [
                "B8XCM8-1",
                "YP_003815433",
                "polymerase complex protein",
                "341",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Ebola (BDBV) Protein Information (NCBI RefSeq)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - \n\nModified on\n   - \n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Ebola (BDBV) Protein Information (NCBI RefSeq) dataset contains Bundibugyo virus [taxid:565995] protein information such as protein accession, name, length and protein function summary from NCBI RefSeq database. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen.\n\nDescription Domain\n   Keywords\n   - protein information\n   - protein length\n   - NCBI RefSeq\n   - protein summary\n\n   Pipeline Steps\n   - Step-1: The script parses the NCBI RefSeq gpff files to extract the accession, length, protein summary and then maps the NCBI RefSeq accesion to the UniProtKB Canonical accessions\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: bdbv_protein_xref_refseq.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/bdbv_protein_xref_refseq.csv\n      Name: refseq_protein_all_viral.gpff\n      URI: https:/data.glygen.org/ln2downloads/ncbi/refseq/2026_06_01/refseq_protein_all_viral.gpff\n   Output Subdomain\n      Name: bdbv_protein_info_refseq.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/bdbv_protein_info_refseq.csv\n      Name: bdbv_protein_info_refseq.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/bdbv_protein_info_refseq.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"8\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/bdbv_protein_info_refseq.csv"
}