{
    "bcoid": "GLY_001184",
    "title": "Bovine Proteoform Phosphorylation Citations (iPTMnet)",
    "description": "The Bovine Proteoform Citations (iPTMNet) contains Bos taurus [taxid:9913] publication information of ...",
    "filename_list": "bovine_proteoform_citations_phosphorylation_sites_iptmnet.csv",
    "filename": "bovine_proteoform_citations_phosphorylation_sites_iptmnet.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Bos taurus"
        ],
        "molecule": [
            "Proteoform"
        ],
        "tag": [
            "Phosphorylation Citations (iPTMnet)"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "citations"
        ]
    },
    "minitable": {
        "content": [
            [
                "P08487-1...",
                "A new functi..."
            ],
            [
                "P00517-1...",
                "Protein kina..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                },
                {
                    "type": "string",
                    "label": "isoform_mapping_notes"
                }
            ],
            [
                "P08487-1",
                "A new function for phospholipase C-gamma1: coupling to the adaptor protein GRB2.",
                "Archives of biochemistry and biophysics",
                "1997-09-01",
                "Pei Z, Maloney J A, Yang L, Williamson J R",
                "protein_xref_pubmed",
                "9281317",
                "protein_xref_iptmnet",
                "P08487",
                ""
            ],
            [
                "P00517-1",
                "Protein kinase A in complex with Rho-kinase inhibitors Y-27632, Fasudil, and H-1152P: structural basis of selectivity.",
                "Structure (London, England : 1993)",
                "2003-12",
                "Breitenlechner Christine, Gassel Michael, Hidaka Hiroyoshi, Kinzel Volker, Huber Robert, Engh Richard A, Bossemeyer Dirk",
                "protein_xref_pubmed",
                "14656443",
                "protein_xref_iptmnet",
                "P00517-1",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Bovine Proteoform Phosphorylation Citations (iPTMnet)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2021-06-03T17:29:17.656153\n\nModified on\n   - 2024-12-05T19:42:09.782Z\n\nCreated by\n   -  [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Bovine Proteoform Citations (iPTMNet) contains Bos taurus [taxid:9913] publication information of phosphorylated proteins from iPTMnet. The script accesses the NCBI ENTREZ infrastructure to retrieve the publication information of the given PMID from iPTMnet. If you use this dataset please provide proper attribution to iPTMnet and GlyGen.\n\nExecution Domain\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: all_blacklisted_pmids.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/compiled/all_blacklisted_pmids.csv\n      Name: bovine_proteoform_phosphorylation_sites_iptmnet.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/bovine_proteoform_phosphorylation_sites_iptmnet.csv\n   Output Subdomain\n      Name: bovine_proteoform_citations_phosphorylation_sites_iptmnet.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/bovine_proteoform_citations_phosphorylation_sites_iptmnet.csv\n      Name: bovine_proteoform_citations_phosphorylation_sites_iptmnet.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/bovine_proteoform_citations_phosphorylation_sites_iptmnet.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\"\n     Description: \"\"\n      Unique Values: \"88\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/bovine_proteoform_citations_phosphorylation_sites_iptmnet.csv"
}