{
    "bcoid": "GLY_001055",
    "title": "Arabidopsis Protein Canonical sequences (UniProtKB)",
    "description": "The Arabidopsis Protein Canonical (UniProtKB) Sequences dataset contains Arabidopsis thaliana [taxid:3702] ...",
    "filename_list": "arabidopsis_protein_canonicalsequences.fasta",
    "filename": "arabidopsis_protein_canonicalsequences.fasta",
    "filetype": "fasta",
    "categories": {
        "species": [
            "Arabidopsis thaliana"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Canonical Protein fasta Sequences"
        ],
        "file_type": [
            "fasta"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "file_category": [
            "sequence"
        ]
    },
    "iconfilename": "fasta_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>\n>tr|A0A1P8B0W0-1|A0A1P8B0W0_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=A0A1P8B0W0-1\nMANETASKVAGYLSNQDSRHQNRH\n\n\n>tr|F4INW8-1|A0A1P8B0W1_ARATH Isoform 1 of Callose synthase-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=F4INW8-1\nMASVQPVMNRDLSSFKRTMNTLAVSSDVAFFNITLRFWIRRNDETREQGKFKPHTDLPRL\nQSFYLDYYQKNVMDVIKIIGNQYTILKEIESSAHSAAIRAIHAALPPHKINGDSRKQADS\nYIQHACDTAGVLFRVLELLSEDVQLPSEFLEADADVKQLAEIFRPYNIIPLYICGKYSMK\nRLPELQAAIDALSFPLCTILPLRVAYNPSPARDSEDLPAVFEISPREPILSLLFSSILSL\nFFSSVFFFLLFSIDYTFHYIVSYLRLKRCRLTTM\n\n\n>tr|Q9ZVK7-1|A0A1P8B0X7_ARATH Isoform 1 of Myosin heavy chain-like protein OS=Arabidopsis thaliana OX=3702 GN=MEE13 PE=1 SV=1 CANONICAL=Q9ZVK7-1\nMDLNLDENENLKARIKQLEHERNELQKDIEQLCMQQGGPSILGVAARMHFQRTASLEQEI\nESLKLKLAACTREKHNLQEELAEAYRVKAQLADLHAGEVAKNLEAEKQVRFFQGSVAAAF\nSERDKSVMEAEKAEENAEMMSQKLSEIEMRLEELSSDCLVQKRLNDTLQADLAKLEEQTR\nTYAGVIEKFYDIRKASLCESLEMSLHEKCASLLDDPIESWTFNDPSTSDYVAALEGELGK\nVKNTVDNLQSKLRVGLEIENHLKKRVRALEKKNIVADGLIVNGITDIRHHHSQLRAYIIA\nLLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDVHMTTVVESCQVTK\nLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEENVNAALQQKVDELQ\nRNILQVTNEKVRTLMELAQLRQEYQSLRDKMSGTREEESTGNSGRIVISNEKDGRLKNMW\nKKSYINRWIDPSSRGGSHLNTEADYASNIEYSRMKVEYAAIKENLESMGHLTTSIRRLRL\nALLKVKELNDTETTARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGESSC\nERTDSVSAAGFEMVELVILAAEIMKEQHH\n\n\n>tr|A0A1P8B0X8-1|A0A1P8B0X8_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=A0A1P8B0X8-1\nMMYLSRRMQSGGFAVYRQGLAEVLQIYNKVERKTSMNPCPAIIRFGRDYHNQICPQGLKL\nSNPLNAGRYFSNVSNDSKMQPSPPNQWFNFPSWGRWVIGSAISLVLSFWNNERLQKLKRI\nEGEAELVVEGVEAVAEMVEKVATATDEMAEEMAEKLPEKNKLKQVALVLEHISEVAAHEA\nHLTQDFLHKVHHNTLSLEKLIYEIYIKILLKSNTNKG\n\n\n>tr|A0A1P8B104-1|A0A1P8B104_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=A0A1P8B104-1\nMNSPTFLVKKEKTKTSQLEDNDTKEDVTLEDVVRRQGEVEEKQVKNVENQSHIRASHRRV\nTMDSSRKYVKLLDRILDLDKKVEDLSARIGGNELMESKEEDSSPHVLCDAVTTYQELHDL\nEEGESTKGMRNLPGEQAFTTGSPF\n\n\n>tr|A0A1P8B118-1|A0A1P8B117_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=A0A1P8B118-1\nMYSSSSSSSIFLQFPPARITTASPFILRRSRKRGARFKRQSRNLVLVNSSIFPPPFDGSV\nPLDSSLAPSLAGIASGLAVYLSSRFFGKSLEKISDKIVDDVVVGEWILFTTPTPFNRFVL\nLRCSLLSFDDDSEKSLSDRLVTEERHFVTLDSGKIVRDGAVTDEKTPLEYQRVCITMEDG\nGVVSLDWPANLDIREERGLDTTVVFIPGTPEGSMEEGVRSFVCEALRRGVFPVVMNPRGC\nAGSPLTTPRLFTAGDSDDISTALRFLSKTRPWTTLTAVGRGYGANMLTKYLAEAGERTPL\nTAAVCIDNPFDLEEITRTSPYSTSLDQQLTRGLVEILLANKELFQGRAKAFDVGKALCSK\nSVREFDKALSMVTYGCESIEDFYSSCATREVIGEVKVPLLFIQNDDVVPPYTIPRSSIAE\nNPFTSLLLCSSSPNLIDGRTVAVSWCQDLASEWLTAVELGLLKGRHPLLEDVDVTVNPSK\nGLVFSEARAPEKSIGAKKLVQAAHEKTVNGYHLDPFRETLEDSDMTPNSNLSPETDLEKN\nVKIDYGSDETENNIVSTRVESIEDNESNVEESDRGQVLQTAEVVVSMLDVTMPGTLKAEE\nKKKVMDAVGRGETVLTALQDAVPEDVREKLTTAVTGILQSGGTKLNLENLKLPSIAPGLK\nKAEEEKKETSSAIGQSDSYSPDPKDKSDGLVSGSDETISGSDNSPGGVELEHSPSKVSQR\nNSDSGKSQPVDNDQDDSPGNHESHTNEKTSAADDSEMASEAKSDSANQGPIGAEAVTNND\nDKVEQGSGVATHQGQVETSKNDEKGAPIANEKSSVADGFEKASDAKNDSTNPQPVGADDI\nTSDGDKVDQGVVLAQQQRKDETSKSDENAKQSATDQNKVTSTDNEGDAGKSSASQPVEKD\nESNDQSKETKVMQPVSDQTKPAIQEPNQPNFNVSQAFEALTGMDDSTQVAVNSVFGVLEN\nMISQLDEEKKEGNEVSDEKNLKDEKNLKDAKNVTNEVVSPSEEEIPYKRETKSLMPSAKS\nRDPACSVSETEKCSDNDKVTGVVIEKQLGRDEFVIGKHSPKILPERKTDSIENSSHDGYL\nGEELSKEKIAKQLDLDTTTALMLDYYPEEGKWKLLDQQPKRLDDDYYPEEGKWKLLDQQP\nEYLGNVADNAAASRNTHDNVQVHSLSVDNEETIEPSYVIVDHEQELELSGMHDAADNQND\nGPHKLDEGCEELEHLINVIVSDSLNVEIQRRMGSAGMRQIESQLSRDIKKVAKTFSYAVV\nYSEPTWTFKRNSKTSNVPAGKVGKLRGDAIIRAIASAVQEAHFLRQVLPIGVVVGSVLAA\nLRKYFDVSTTTNNAKRDVVPGRRQKYENNGAMASVLPDKVSKETKQNNSSIGEMVESGLQ\nSINNKSAMVGAVTAALGASAMLVQHEDPQRGGIMSKSSDKDSQQKESGQLDQSSMVGSFA\nEKAMSIAGPAVPTKETGEVDQDRIVAMLADLGQRGGILSLVGKLALLWGGLRGAMSLTDR\nLIQFLHMDEWPLLKRAVGFIGMVLVLWSPVVIPLLPTLLQNWSTSNPSRVAELASVVGLY\nVAVFILVMLWGKRVRKYENPFKQYGLDLKASNKEKIQEFLKAFAGGITVVLLIQFINAIS\nGAAFLSRPPYFPHSFDAMKWLKGCGQFLLLIIRGFTAATFVVLVEELLFRSWMPAEIAID\nLGYHQSIIITGLIFALFQRSLRSIPGFWLLSLALTWARERSQGNLIVPIGLRAGIIASSF\nILQSGGFLTYNPSSPVWIAGSRPSQPFSGVVGLMVSLALALILYPKQGKLIYYAQKNKKR\nIGESIENEDRRRASDLHAFRVRKLEVHAGCTSAAATCKRYELKHNKMLEFSRKAGMRRRL\nIFSCRIMQLRKNVNKLNTEITRLAHGGY\n\n\n>tr|Q8RUZ5-1|A0A1P8B120_ARATH Isoform 1 of Transcription factor SCREAM-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q8RUZ5-1\nMVSREQKRGSLQEKFQLLRSITNSHAENDTSIIMDASKYIQKLKQKVERFNQDPTAEQSS\nSEPTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFS\nLHAMGLENEDGENMDAEAVKQAVTDAIRSWGEINDPQN\n\n\n>tr|A8MSG0-1|A0A1P8B123_ARATH Isoform 1 of D-tagatose-1,6-bisphosphate aldolase subunit OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=A8MSG0-1\nMAETSTLLFSTFSSHLTISPFRQSHPSAARFSSLLSRVRPSRFAVKASHYGNFSDDDAFN\nFFPWSDANNEIEWVPEERITLFTSDGLVQIGGNMVPRRIKSSNKHGRSRSLEKHQKFHES\nAYMDPAQGLCLGALFDIAATNGLDMGRRLCIFGFCRSVEMLSDVVEDTVLEHGGEIVATE\nTESTSGLQEKLTMTVAVPYLWGVPPAAERLHLAVRTGGGIVDKVYWQWHFL\n\n\n>tr|A0A1P8B135-1|A0A1P8B135_ARATH Isoform 1 of MATH domain/coiled-coil protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=A0A1P8B135-1\nMKHPDIATGFKLNGKGLKTAYMSLLLSLIETLRRPPLSFSDIELSKANSTLRELTEAGFK\nLDWLKKKLEEVSLKRKNAVDDGSRVKQVEERIKILKVDIVGTQR\n\n\n</pre>"
    },
    "readme": "Name\n   - Arabidopsis Protein Canonical sequences (UniProtKB)\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2024-07-08T13:28:04\n\nModified on\n   - 2024-07-08T13:30:22.604Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Arabidopsis Protein Canonical (UniProtKB) Sequences dataset contains Arabidopsis thaliana [taxid:3702] canonical protein fasta sequences from the UniProtKB database. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - protein sequence\n   - fasta\n   - UniProtKB canonical accessions\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB fasta sequence for all chicken canonical accessions data from the triplestore containing triples from nt file and extracts it into a dataset as fasta format\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-arabidopsis-thaliana.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2026_06_13/uniprot-proteome-arabidopsis-thaliana.nt\n   Output Subdomain\n      Name: arabidopsis_protein_canonicalsequences.fasta\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/arabidopsis_protein_canonicalsequences.fasta\n      Name: arabidopsis_protein_canonicalsequences.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/arabidopsis_protein_canonicalsequences.stat.csv\n\nFields\n      Name: \"sequence\"\n     Description: \"Amino acid sequence\"\n      Unique Values: \"25054\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/arabidopsis_protein_canonicalsequences.fasta"
}