{
    "bcoid": "GLY_000282",
    "title": "Glycan Classification",
    "description": "The dataset provides information on the glycan classification such as glycan type and sub-type for the ...",
    "filename_list": "glycan_classification.csv",
    "filename": "glycan_classification.csv",
    "filetype": "csv",
    "categories": {
        "molecule": [
            "Glycan"
        ],
        "tag": [
            "Classification"
        ],
        "status": [
            "Reviewed"
        ],
        "file_type": [
            "csv"
        ],
        "scope": [
            "internal"
        ],
        "species": [
            "Mus musculus",
            "Homo sapiens",
            "Sus scrofa",
            "Drosophila melanogaster",
            "Rattus norvegicus",
            "Severe acute respiratory syndrome coronavirus 2",
            "Rattus",
            "Saccharomyces cerevisiae",
            "Hepacivirus C",
            "Severe acute respiratory syndrome-related coronavirus",
            "Hepatitis C virus (isolate H77)",
            "Dictyostelium discoideum",
            "Sus scrofa domesticus"
        ],
        "file_category": [
            "others"
        ]
    },
    "minitable": {
        "content": [
            [
                "G00002CF...",
                "Human Milk O..."
            ],
            [
                "G00008SX...",
                "N-linked..."
            ]
        ],
        "headers": [
            "glytoucan_ac...",
            "glycan_type..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "glycan_type"
                },
                {
                    "type": "string",
                    "label": "glycan_type_source"
                },
                {
                    "type": "string",
                    "label": "glycan_type_source_id"
                },
                {
                    "type": "string",
                    "label": "glycan_subtype"
                },
                {
                    "type": "string",
                    "label": "glycan_subtype_source"
                },
                {
                    "type": "string",
                    "label": "glycan_subtype_source_id"
                }
            ],
            [
                "G00002CF",
                "Human Milk Oligosaccharide",
                "GlycoMotif",
                "GGC.000103",
                "",
                "",
                ""
            ],
            [
                "G00008SX",
                "N-linked",
                "GlycoMotif",
                "GGC.000004",
                "Complex",
                "GlycoMotif",
                "GGC.000004"
            ]
        ]
    },
    "readme": "Name\n   - Glycan Classification\n\nVersion\n   - v-2.12.1\n\nCreated on\n  - 2019-11-13T12:59:46.920689\n\nModified on\n   - 2024-05-17T11:23:54.861Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Nathan Edwards [nje5@georgetown.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The dataset provides information on the glycan classification such as glycan type and sub-type for the associated glycan (GlyTouCan Accession). The listed GlyTouCan Accessions are derived from the GlyTouCan accession master list (https://data.glygen.org/GLYDS000281). Source database: https://glytoucan.org/\n\nDescription Domain\n   Keywords\n   - Glycan\n   - GlyTouCan Accession\n   - Classification\n\n   Pipeline Steps\n   - Step-1: The input file was downloaded from the author and a python script is used to extract the data for the GlyTouCan accessions based on the acession master list. \n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-species-agnostic-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: glycan_masterlist.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/glycan_masterlist.csv\n      Name: classification.tsv\n      URI: https:/data.glygen.org/ln2downloads/glytoucan/2026_07_27/export/classification.tsv\n   Output Subdomain\n      Name: glycan_classification.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/glycan_classification.csv\n      Name: glycan_classification.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.12.1/reviewed/glycan_classification.stat.csv\n\nFields\n      Name: \"glytoucan_ac\"\"\n     Description: \"\"\n      Unique Values: \"47866\"",
    "downloadurl": "/ln2data/releases/data/v-2.12.1/reviewed/glycan_classification.csv"
}