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"https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of colorectum", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "CRC", "description": "" }, { "id": "MIM:114500", "resource": "MIM", "url": "https://www.omim.org/entry/114500", "name": "Colorectal cancer", "description": "Colorectal cancer" } ], "unlinked_id_list": [], "evidence": [ { "id": "9256", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:9256" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "Q8WZ42", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/Q8WZ42" } ], "glycoeffect": [ "o-glyco-site-loss" ], "start_pos": 7151, "end_pos": 7151, "subjects_tested": "2053", "subjects_positive": "2", "frequency": "0.1", "sequence_org": "S", "sequence_mut": "L", "comment": "Somatic mutation passed 0 out of 6 filters: .", "chr_id": "2", "chr_pos": "178722384", "ref_nt": "G", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "S7151", "disease": [ { "disease_id": "DOID:4159", "recommended_name": { "id": "DOID:4159", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:4159", "name": "skin cancer", "description": "An integumentary system cancer located_in the skin that is the uncontrolled growth of abnormal skin cells." }, "synonyms": [ { "id": "DOID:4159", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:4159", "name": "CA - skin cancer", "description": "" }, { "id": "DOID:4159", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:4159", "name": "malignant neoplasm of skin", "description": "" }, { "id": "DOID:4159", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:4159", "name": "melanoma and Non-melanoma skin cancer", "description": "" } ], "unlinked_id_list": [ "DOID:3149", "DOID:3451" ], "evidence": [ { "id": "4159", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:4159" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "rs759713604", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs759713604" }, { "id": "rs759713604", "database": "ExAC", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs759713604" }, { "id": "rs759713604", "database": "TOPMed", "url": "https://www.ncbi.nlm.nih.gov/snp/rs759713604#frequency_tab" }, { "id": "rs759713604", "database": "gnomAD", "url": "http://gnomad.broadinstitute.org/awesome?query=rs759713604" } ], "glycoeffect": [ "n-glyco-sequon-gain" ], "start_pos": 7157, "end_pos": 7157, "sequence_org": "A", "sequence_mut": "T", "comment": "Germline mutation passed 1 filters: n-glyco-sequon-gain (NVA->NVT).", "chr_id": "2", "chr_pos": "178722367", "ref_nt": "T", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "A7157", "disease": [ { "disease_id": "DOID:0110283", "recommended_name": { "id": "DOID:0110283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110283", "name": "autosomal recessive limb-girdle muscular dystrophy type 2J", "description": "An autosomal recessive limb-girdle muscular dystrophy that has_material_basis_in homozygous mutation in the titin gene (TTN)." }, "synonyms": [ { "id": "DOID:0110283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110283", "name": "LGMD2J", "description": "" }, { "id": "DOID:0110283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110283", "name": "muscular dystrophy, limb-girdle, type 2J", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": 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Some patients may remain ambulatory but most are wheelchair dependant 20 years after onset." }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "LGMD2J", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "TTN autosomal recessive limb-girdle muscular dystrophy", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "autosomal recessive limb-girdle muscular dystrophy caused by mutation in TTN", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "muscular dystrophy, limb-girdle, autosomal recessive 10", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "muscular dystrophy, limb-girdle, type 2J", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "limb-girdle muscular dystrophy type 2J", "description": "" }, { "id": "MIM:608807", "resource": "MIM", "url": "https://www.omim.org/entry/608807", "name": "Muscular dystrophy, limb-girdle, autosomal recessive 10", "description": "Muscular dystrophy, limb-girdle, autosomal recessive 10" } ], "unlinked_id_list": [], "evidence": [ { "id": "608807", "database": "MIM", "url": "https://www.omim.org/entry/608807" }, { "id": "0110283", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0110283" } ] }, { "disease_id": "DOID:0110430", "recommended_name": { "id": "DOID:0110430", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110430", "name": "dilated cardiomyopathy 1G", "description": "A dilated cardiomyopathy that has_material_basis_in mutation in the TTN gene on chromosome 2q31." }, "synonyms": [ { "id": "DOID:0110430", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110430", "name": "CMD1G", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "dilated cardiomyopathy 1G", "description": "Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TTN gene." }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "CMD1G", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "TTN familial isolated dilated cardiomyopathy", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "cardiomyopathy, dilated, type 1G", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "dilated cardiomyopathy type 1G", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "familial isolated dilated cardiomyopathy caused by mutation in TTN", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "cardiomyopathy, dilated, 1G", "description": "" }, { "id": "MIM:604145", "resource": "MIM", "url": "https://www.omim.org/entry/604145", "name": "Cardiomyopathy, dilated, 1G", "description": "Cardiomyopathy, dilated, 1G" } ], "unlinked_id_list": [], "evidence": [ { "id": "604145", "database": "MIM", "url": "https://www.omim.org/entry/604145" }, { "id": "0110430", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0110430" } ] }, { "disease_id": "DOID:0081341", "recommended_name": { "id": "DOID:0081341", "resource": "Disease 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"resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012714", "name": "Salih myopathy", "description": "" }, { "id": "MONDO:0012714", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012714", "name": "EOMFC", "description": "" }, { "id": "MONDO:0012714", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012714", "name": "SALMY", "description": "" }, { "id": "MIM:611705", "resource": "MIM", "url": "https://www.omim.org/entry/611705", "name": "Congenital myopathy 5 with cardiomyopathy", "description": "Congenital myopathy 5 with cardiomyopathy" } ], "unlinked_id_list": [], "evidence": [ { "id": "611705", "database": "MIM", "url": "https://www.omim.org/entry/611705" }, { "id": "0081341", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081341" } ] }, { "disease_id": "DOID:0111188", "recommended_name": { "id": "DOID:0111188", "resource": "Disease Ontology", "url": 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"DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "MFM9", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "MPRM", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "Myofibrillar myopathy-titinopathy", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "Hereditary inclusion body myopathy with early respiratory failure", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "hereditary myopathy with early respiratory failure", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "proximal myopathy with early respiratory muscle involvement", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "autosomal dominant distal myopathy with early respiratory failure", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "myofibrillar myopathy 9 with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, myofibrillar, 9, with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "ADMERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "Edstrom myopathy", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "Edstrm myopathy", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HIBM-ERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HMERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HMERF-ERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "distal myopathy with early respiratory muscle involvement", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "hereditary inclusion body myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "hereditary proximal myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myofibrillar myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, distal, with early respiratory failure, autosomal dominant", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, proximal, with early respiratory muscle involvement", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, myofibrillar, 9, with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "ADMERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "Edstrom myopathy", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "Edstrm myopathy", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HIBM-ERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HMERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HMERF-ERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "distal myopathy with early respiratory muscle involvement", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "hereditary inclusion body myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "hereditary proximal myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myofibrillar myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, distal, with early respiratory failure, autosomal dominant", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", 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"MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "nonsmall cell lung cancer, somatic", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "nonsmall cell lung cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility 1", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "LNCR1", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility 1", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "lung cancer susceptibility 3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "LNCR3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "lung cancer susceptibility 3", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "lung cancer susceptibility 4", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "LNCR4", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "lung cancer susceptibility 4", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "lung cancer susceptibility 5", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "LNCR5", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "lung cancer susceptibility 5", "description": "" }, { "id": "MIM:211980", "resource": "MIM", "url": "https://www.omim.org/entry/211980", "name": "Lung cancer", "description": "Lung cancer" } ], "unlinked_id_list": [ "DOID:4765" ], "evidence": [ { "id": "1324", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:1324" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "Q8WZ42", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/Q8WZ42" } ], "glycoeffect": [], "start_pos": 736, "end_pos": 736, "subjects_tested": "2053", "subjects_positive": "4", "frequency": "0.2", "sequence_org": "G", "sequence_mut": "R", "comment": "Somatic mutation passed 0 out of 6 filters: .", "chr_id": "2", "chr_pos": "178786012", "ref_nt": "C", "alt_nt": "T", "minor_allelic_frequency": "", "site_lbl": "G736", "disease": [ { "disease_id": "DOID:4159", "recommended_name": { "id": "DOID:4159", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:4159", "name": "skin cancer", "description": "An integumentary system cancer located_in the skin that is the uncontrolled growth of abnormal skin cells." }, "synonyms": [ { "id": "DOID:4159", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:4159", "name": "CA - skin cancer", "description": "" }, { "id": "DOID:4159", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:4159", "name": "malignant neoplasm of skin", "description": "" }, { "id": "DOID:4159", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:4159", "name": "melanoma and Non-melanoma skin cancer", "description": "" } ], "unlinked_id_list": [ "DOID:3149", "DOID:3451" ], "evidence": [ { "id": "4159", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:4159" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "rs727505052", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs727505052" }, { "id": "rs727505052", "database": "ExAC", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs727505052" }, { "id": "rs727505052", "database": "TOPMed", "url": "https://www.ncbi.nlm.nih.gov/snp/rs727505052#frequency_tab" }, { "id": "rs727505052", "database": "gnomAD", "url": "http://gnomad.broadinstitute.org/awesome?query=rs727505052" } ], "glycoeffect": [ "n-glyco-sequon-gain" ], "start_pos": 7372, "end_pos": 7372, "sequence_org": "D", "sequence_mut": "N", "comment": "Germline mutation passed 1 filters: n-glyco-sequon-gain (DAS->NAS).", "chr_id": "2", "chr_pos": "178720954", "ref_nt": "T", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "D7372", "disease": [ { "disease_id": "DOID:0110283", "recommended_name": { "id": "DOID:0110283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110283", "name": "autosomal recessive limb-girdle muscular dystrophy type 2J", "description": "An autosomal recessive limb-girdle muscular dystrophy that has_material_basis_in homozygous mutation in the titin gene (TTN)." }, "synonyms": [ { "id": "DOID:0110283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110283", "name": "LGMD2J", "description": "" }, { "id": "DOID:0110283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110283", "name": "muscular dystrophy, limb-girdle, type 2J", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "autosomal recessive limb-girdle muscular dystrophy type 2J", "description": "Autosomal recessive limb-girdle muscular dystrophy type 2J (LGMD2J) is a form of limb-girdle muscular dystrophy that usually has a childhood onset (but can range from the first to third decade of life) of severe progressive proximal weakness, eventually involving the distal muscles. Some patients may remain ambulatory but most are wheelchair dependant 20 years after onset." }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "LGMD2J", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "TTN autosomal recessive limb-girdle muscular dystrophy", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "autosomal recessive limb-girdle muscular dystrophy caused by mutation in TTN", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "muscular dystrophy, limb-girdle, autosomal recessive 10", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "muscular dystrophy, limb-girdle, type 2J", "description": "" }, { "id": "MONDO:0012127", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012127", "name": "limb-girdle muscular dystrophy type 2J", "description": "" }, { "id": "MIM:608807", "resource": "MIM", "url": "https://www.omim.org/entry/608807", "name": "Muscular dystrophy, limb-girdle, autosomal recessive 10", "description": "Muscular dystrophy, limb-girdle, autosomal recessive 10" } ], "unlinked_id_list": [], "evidence": [ { "id": "608807", "database": "MIM", "url": "https://www.omim.org/entry/608807" }, { "id": "0110283", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0110283" } ] }, { "disease_id": "DOID:0110430", "recommended_name": { "id": "DOID:0110430", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110430", "name": "dilated cardiomyopathy 1G", "description": "A dilated cardiomyopathy that has_material_basis_in mutation in the TTN gene on chromosome 2q31." }, "synonyms": [ { "id": "DOID:0110430", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110430", "name": "CMD1G", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "dilated cardiomyopathy 1G", "description": "Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TTN gene." }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "CMD1G", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "TTN familial isolated dilated cardiomyopathy", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "cardiomyopathy, dilated, type 1G", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "dilated cardiomyopathy type 1G", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "familial isolated dilated cardiomyopathy caused by mutation in TTN", "description": "" }, { "id": "MONDO:0011400", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011400", "name": "cardiomyopathy, dilated, 1G", "description": "" }, { "id": "MIM:604145", "resource": "MIM", "url": "https://www.omim.org/entry/604145", "name": "Cardiomyopathy, dilated, 1G", "description": "Cardiomyopathy, dilated, 1G" } ], "unlinked_id_list": [], "evidence": [ { "id": "604145", "database": "MIM", "url": "https://www.omim.org/entry/604145" }, { "id": "0110430", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0110430" } ] }, { "disease_id": "DOID:0081341", "recommended_name": { "id": "DOID:0081341", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081341", "name": "congenital myopathy 5", "description": "A congenital myopathy that is characterized by the onset of muscle weakness in infancy manifest as neonatal hypotonia, delayed motor development, and often distal contractures and that has_material_basis_in homozygous or compound heterozygous mutation in the gene encoding titin (TTN) on chromosome 2q31." }, "synonyms": [ { "id": "DOID:0081341", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081341", "name": "Salih myopathy", "description": "" }, { "id": "DOID:0081341", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0081341", "name": "congenital myopathy-5 with cardiomyopathy", "description": "" }, { "id": "MONDO:0012714", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012714", "name": "early-onset myopathy with fatal cardiomyopathy", "description": "" }, { "id": "MONDO:0012714", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012714", "name": "Salih myopathy", "description": "" }, { "id": "MONDO:0012714", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012714", "name": "EOMFC", "description": "" }, { "id": "MONDO:0012714", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012714", "name": "SALMY", "description": "" }, { "id": "MIM:611705", "resource": "MIM", "url": "https://www.omim.org/entry/611705", "name": "Congenital myopathy 5 with cardiomyopathy", "description": "Congenital myopathy 5 with cardiomyopathy" } ], "unlinked_id_list": [], "evidence": [ { "id": "611705", "database": "MIM", "url": "https://www.omim.org/entry/611705" }, { "id": "0081341", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0081341" } ] }, { "disease_id": "DOID:0110315", "recommended_name": { "id": "DOID:0110315", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110315", "name": "hypertrophic cardiomyopathy 9", "description": "A familial hypertrophic cardiomyopathy that has_material_basis_in heterozygous mutation in the TTN gene on chromosome 2q31." }, "synonyms": [ { "id": "DOID:0110315", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110315", "name": "CMH9", "description": "" }, { "id": "DOID:0110315", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0110315", "name": "cardiomyopathy, familial hypertrophic, 9", "description": "" }, { "id": "MONDO:0013412", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013412", "name": "hypertrophic cardiomyopathy 9", "description": "Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TTN gene." }, { "id": "MONDO:0013412", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013412", "name": "CMH9", "description": "" }, { "id": "MONDO:0013412", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013412", "name": "TTN hypertrophic cardiomyopathy", "description": "" }, { "id": "MONDO:0013412", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013412", "name": "cardiomyopathy, familial hypertrophic, 9", "description": "" }, { "id": "MONDO:0013412", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013412", "name": "cardiomyopathy, familial hypertrophic, type 9", "description": "" }, { "id": "MONDO:0013412", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013412", "name": "hypertrophic cardiomyopathy caused by mutation in TTN", "description": "" }, { "id": "MONDO:0013412", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013412", "name": "hypertrophic cardiomyopathy type 9", "description": "" }, { "id": "MIM:613765", "resource": "MIM", "url": "https://www.omim.org/entry/613765", "name": "Cardiomyopathy, familial hypertrophic, 9", "description": "Cardiomyopathy, familial hypertrophic, 9" } ], "unlinked_id_list": [], "evidence": [ { "id": "613765", "database": "MIM", "url": "https://www.omim.org/entry/613765" }, { "id": "0110315", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0110315" } ] }, { "disease_id": "DOID:0111188", "recommended_name": { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "myofibrillar myopathy 9", "description": "A myofibrillar myopathy characterized by adult onset of slowly progressive muscle weakness involving the diaphragm and resulting in respiratory insufficiency that has_material_basis_in heterozygous mutation in the TTN gene on chromosome 2q31." }, "synonyms": [ { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "Edstrom myopathy", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "HIBM-ERF", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "HMERF", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "MFM-titinopathy", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "MFM9", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "MPRM", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "Myofibrillar myopathy-titinopathy", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "Hereditary inclusion body myopathy with early respiratory failure", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "hereditary myopathy with early respiratory failure", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "proximal myopathy with early respiratory muscle involvement", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "autosomal dominant distal myopathy with early respiratory failure", "description": "" }, { "id": "DOID:0111188", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0111188", "name": "myofibrillar myopathy 9 with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, myofibrillar, 9, with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "ADMERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "Edstrom myopathy", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "Edstrm myopathy", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HIBM-ERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HMERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "HMERF-ERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "distal myopathy with early respiratory muscle involvement", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "hereditary inclusion body myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "hereditary proximal myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myofibrillar myopathy with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, distal, with early respiratory failure, autosomal dominant", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, proximal, with early respiratory muscle involvement", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "myopathy, myofibrillar, 9, with early respiratory failure", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "ADMERF", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "Edstrom myopathy", "description": "" }, { "id": "MONDO:0011362", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011362", "name": "Edstrm myopathy", 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"biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "Q8WZ42", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/Q8WZ42" } ], "glycoeffect": [], "start_pos": 7412, "end_pos": 7412, "subjects_tested": "4177", "subjects_positive": "1", "frequency": "0.0", "sequence_org": "P", "sequence_mut": "S", "comment": "Somatic mutation passed 0 out of 6 filters: .", "chr_id": "2", "chr_pos": "178720577", "ref_nt": "G", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "P7412", "disease": [ { "disease_id": "DOID:10283", "recommended_name": { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "prostate cancer", "description": "A male reproductive organ cancer that is located_in the prostate." }, "synonyms": [ { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "NGP - new growth of prostate", "description": "" }, { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "hereditary prostate cancer", "description": "" }, { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "malignant tumor of the prostate", "description": "" }, { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "prostate cancer, familial", "description": "" }, { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "prostate neoplasm", "description": "" }, { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "prostatic cancer", "description": "" }, { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "prostatic neoplasm", "description": "" }, { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "tumor of the prostate", "description": "" }, { "id": "MONDO:0010257", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010257", "name": "prostate cancer, hereditary, X-linked 1", "description": "" }, { "id": "MONDO:0010257", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010257", "name": "HPCX1", "description": "" }, { "id": "MONDO:0010257", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010257", "name": "prostate cancer, hereditary, X-linked 1", "description": "" }, { "id": "MONDO:0010405", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010405", "name": "prostate cancer, hereditary, X-linked 2", "description": "" }, { "id": "MONDO:0010405", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010405", "name": "HPCX2", "description": "" }, { "id": "MONDO:0010405", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010405", "name": "prostate cancer, hereditary, X-linked 2", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer, hereditary, 1", "description": "Any familial prostate cancer in which the cause of the disease is a mutation in the RNASEL gene." }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "RNASEL familial prostate cancer", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "familial prostate cancer caused by mutation in RNASEL", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer, hereditary, 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer, hereditary, type 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "HPC1", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "prostate cancer, hereditary, 8", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "prostate cancer, hereditary, 8", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "prostate cancer, hereditary, type 8", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "HPC8", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "prostate cancer, hereditary, 3", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "prostate cancer, hereditary, 3", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "prostate cancer, hereditary, type 3", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "prostate cancer, susceptibility to, 3", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "HPC3", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "prostate cancer, hereditary, 4", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "prostate cancer, hereditary, 4", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "prostate cancer, hereditary, type 4", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "prostate cancer, susceptibility to, 4", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "HPC4", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, type 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "HPC5", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, type 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "HPC6", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "prostate cancer, hereditary, 7", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "HPC7", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "prostate cancer, hereditary, 7", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, type 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "HPC9", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "prostate cancer, hereditary, 10", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "HPC10", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "prostate cancer, hereditary, 10", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, 12", "description": "Any familial prostate cancer in which the cause of the disease is a mutation in the EHBP1 gene." }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "EHBP1 familial prostate cancer", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "familial prostate cancer caused by mutation in EHBP1", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, 12", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, type 12", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "HPC12", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, 13", "description": "Any familial prostate cancer in which the cause of the disease is a mutation in the MSMB gene." }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "MSMB familial prostate cancer", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "familial prostate cancer caused by mutation in MSMB", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, 13", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, type 13", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "HPC13", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "prostate cancer, hereditary, 11", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "HPC11", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "prostate cancer, hereditary, 11", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "prostate cancer, hereditary, 14", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "HPC14", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "prostate cancer, hereditary, 14", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "prostate cancer, hereditary, 15", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "HPC15", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "prostate cancer, hereditary, 15", "description": "" }, { "id": "MONDO:0700275", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0700275", "name": "prostate cancer, hereditary", "description": "An instance of prostate cancer that is caused by an inherited genomic modification in an individual. Familial prostate cancer (FPC) is a malignant tumor of the prostate with an early onset. FPC is either asymptomatic or causes mictionary symptoms, erectile dysfunction, bone pain, venous compression and infectious or inflammatory syndrome (for the metastatic forms). It is also characterized by familial antecedents." }, { "id": "MIM:601518", "resource": "MIM", "url": "https://www.omim.org/entry/601518", "name": "Prostate cancer, hereditary, 1", "description": "Prostate cancer, hereditary, 1" }, { "id": "MIM:610997", "resource": "MIM", "url": "https://www.omim.org/entry/610997", "name": "Prostate cancer, hereditary, 9", "description": "Prostate cancer, hereditary, 9" }, { "id": "MIM:611868", "resource": "MIM", "url": "https://www.omim.org/entry/611868", "name": "Prostate cancer, hereditary, 12", "description": "Prostate cancer, hereditary, 12" }, { "id": "MIM:611928", "resource": "MIM", "url": "https://www.omim.org/entry/611928", "name": "Prostate cancer, hereditary, 13", "description": "Prostate cancer, hereditary, 13" }, { "id": "MIM:611955", "resource": "MIM", "url": "https://www.omim.org/entry/611955", "name": "Prostate cancer, hereditary, 11", "description": "Prostate cancer, hereditary, 11" }, { "id": "MIM:176807", "resource": "MIM", "url": "https://www.omim.org/entry/176807", "name": "Prostate cancer", "description": "Prostate cancer" } ], "unlinked_id_list": [], "evidence": [ { "id": "10283", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:10283" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "Q8WZ42", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/Q8WZ42" } ], "glycoeffect": [], "start_pos": 7417, "end_pos": 7417, "subjects_tested": "1704", "subjects_positive": "1", "frequency": "0.1", "sequence_org": "V", "sequence_mut": "L", "comment": "Somatic mutation passed 0 out of 6 filters: .", "chr_id": "2", "chr_pos": "178720562", "ref_nt": "C", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "V7417", "disease": [ { "disease_id": "DOID:363", "recommended_name": { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterine cancer", "description": "A female reproductive organ cancer that is located_in the uterus." }, "synonyms": [ { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "CA - cancer of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "Tumour of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "malignant neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "malignant uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "neoplasm of uterus", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterine tumor", "description": "" }, { "id": "DOID:363", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:363", "name": "uterus neoplasm", "description": "" } ], "unlinked_id_list": [ "DOID:9460", "DOID:5166", "DOID:2021", "DOID:4114" ], "evidence": [ { "id": "363", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:363" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "Q8WZ42", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/Q8WZ42" } ], "glycoeffect": [], "start_pos": 7420, "end_pos": 7420, "subjects_tested": "2003", "subjects_positive": "1", "frequency": "0.0", "sequence_org": "K", "sequence_mut": "N", "comment": "Somatic mutation passed 0 out of 6 filters: .", "chr_id": "2", "chr_pos": "178720551", "ref_nt": "T", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "K7420", "disease": [ { "disease_id": "DOID:3571", "recommended_name": { "id": "DOID:3571", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:3571", "name": "liver cancer", "description": "A hepatobiliary system cancer that is located_in the liver." }, "synonyms": [ { "id": "DOID:3571", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:3571", "name": "Ca liver - 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"https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of colorectum", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of large bowel", "description": "" 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"name": "familial prostate cancer caused by mutation in RNASEL", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer, hereditary, 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer, hereditary, type 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "HPC1", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "prostate cancer, hereditary, 8", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": 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"MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "HPC4", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, type 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "HPC5", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, type 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "HPC6", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "prostate cancer, hereditary, 7", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "HPC7", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "prostate cancer, hereditary, 7", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, type 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "HPC9", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "prostate cancer, hereditary, 10", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "HPC10", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "prostate cancer, hereditary, 10", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, 12", "description": "Any familial prostate cancer in which the cause of the disease is a mutation in the EHBP1 gene." }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "EHBP1 familial prostate cancer", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "familial prostate cancer caused by mutation in EHBP1", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, 12", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, type 12", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "HPC12", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, 13", "description": "Any familial prostate cancer in which the cause of the disease is a mutation in the MSMB gene." }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "MSMB familial prostate cancer", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "familial prostate cancer caused by mutation in MSMB", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, 13", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, type 13", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "HPC13", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "prostate cancer, hereditary, 11", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "HPC11", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "prostate cancer, hereditary, 11", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "prostate cancer, hereditary, 14", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "HPC14", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "prostate cancer, hereditary, 14", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "prostate cancer, hereditary, 15", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "HPC15", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "prostate cancer, hereditary, 15", "description": "" }, { "id": "MONDO:0700275", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0700275", "name": "prostate cancer, hereditary", "description": "An instance of prostate cancer that is caused by an inherited genomic modification in an individual. Familial prostate cancer (FPC) is a malignant tumor of the prostate with an early onset. FPC is either asymptomatic or causes mictionary symptoms, erectile dysfunction, bone pain, venous compression and infectious or inflammatory syndrome (for the metastatic forms). It is also characterized by familial antecedents." }, { "id": "MIM:601518", "resource": "MIM", "url": "https://www.omim.org/entry/601518", "name": "Prostate cancer, hereditary, 1", "description": "Prostate cancer, hereditary, 1" }, { "id": "MIM:610997", "resource": "MIM", "url": "https://www.omim.org/entry/610997", "name": "Prostate cancer, hereditary, 9", "description": "Prostate cancer, hereditary, 9" }, { "id": "MIM:611868", "resource": "MIM", "url": "https://www.omim.org/entry/611868", "name": "Prostate cancer, hereditary, 12", "description": "Prostate cancer, hereditary, 12" }, { "id": "MIM:611928", "resource": "MIM", "url": "https://www.omim.org/entry/611928", "name": "Prostate cancer, hereditary, 13", "description": "Prostate cancer, hereditary, 13" }, { "id": "MIM:611955", "resource": "MIM", "url": "https://www.omim.org/entry/611955", "name": "Prostate cancer, hereditary, 11", "description": "Prostate cancer, hereditary, 11" }, { "id": "MIM:176807", "resource": "MIM", "url": "https://www.omim.org/entry/176807", "name": "Prostate cancer", "description": "Prostate cancer" } ], "unlinked_id_list": [], "evidence": [ { "id": "10283", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:10283" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "Q8WZ42", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/Q8WZ42" } ], "glycoeffect": [], "start_pos": 7483, "end_pos": 7483, "subjects_tested": "4799", "subjects_positive": "1", "frequency": "0.0", "sequence_org": "K", "sequence_mut": "M", "comment": "Somatic mutation passed 0 out of 6 filters: .", "chr_id": "2", "chr_pos": "178720243", "ref_nt": "T", "alt_nt": "A", "minor_allelic_frequency": "", "site_lbl": "K7483", "disease": [ { "disease_id": "DOID:1324", "recommended_name": { "id": "DOID:1324", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:1324", "name": "lung cancer", "description": "A respiratory system cancer that is located_in the lung." }, "synonyms": [ { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer", "description": "A malignant neoplasm involving the lung." }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "adenocarcinoma of lung, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "adenocarcinoma of lung, somatic", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "cancer of lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer, protection against, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer, resistance to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer, somatic", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "lung cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant lung neoplasm", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant lung tumor", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant lung tumour", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant neoplasm of lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant neoplasm of the lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant tumor of lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant tumor of the lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant tumour of lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant tumour of the lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "nonsmall cell lung cancer, somatic", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "nonsmall cell lung cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility 1", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "LNCR1", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility 1", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "lung cancer susceptibility 3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "LNCR3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "lung cancer susceptibility 3", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "lung cancer susceptibility 4", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "LNCR4", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "lung cancer susceptibility 4", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "lung cancer susceptibility 5", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "LNCR5", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "lung cancer susceptibility 5", "description": "" }, { "id": "MIM:211980", "resource": "MIM", "url": "https://www.omim.org/entry/211980", "name": "Lung cancer", "description": "Lung cancer" } ], "unlinked_id_list": [ "DOID:4765" ], "evidence": [ { "id": "1324", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:1324" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "Q8WZ42", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/Q8WZ42" } ], "glycoeffect": [], "start_pos": 7486, "end_pos": 7486, "subjects_tested": "3601", "subjects_positive": "1", "frequency": "0.0", "sequence_org": "D", "sequence_mut": "G", "comment": "Somatic mutation passed 0 out of 6 filters: .", "chr_id": "2", "chr_pos": "178720234", "ref_nt": "T", "alt_nt": "C", "minor_allelic_frequency": "", "site_lbl": "D7486", "disease": [ { "disease_id": "DOID:9256", "recommended_name": { "id": "DOID:9256", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:9256", "name": "colorectal cancer", "description": "A large intestine cancer that is located_in the colon and/or located_in the rectum." }, "synonyms": [ { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer", "description": "A primary or metastatic malignant neoplasm that affects the colon or rectum. Representative examples include carcinoma, lymphoma, and sarcoma." }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of colorectum", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "cancer of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colon cancer, advanced, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colon cancer, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer with chromosomal instability, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer, somatic", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectal cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "colorectum cancer", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant colorectal neoplasm", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant colorectal tumor", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant colorectal tumour", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant colorectum neoplasm", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large bowel neoplasm", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large bowel tumor", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large bowel tumour", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large intestine neoplasm", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large intestine tumor", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant large intestine tumour", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of colorectum", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant neoplasm of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumor of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of the large bowel", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "malignant tumour of the large intestine", "description": "" }, { "id": "MONDO:0005575", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0005575", "name": "CRC", "description": "" }, { "id": "MIM:114500", "resource": "MIM", "url": "https://www.omim.org/entry/114500", "name": "Colorectal cancer", "description": "Colorectal cancer" } ], "unlinked_id_list": [], "evidence": [ { "id": "9256", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:9256" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] }, { "evidence": [ { "id": "Q8WZ42", "database": "BioMuta", "url": "https://hivelab.biochemistry.gwu.edu/biomuta/proteinview/Q8WZ42" } ], "glycoeffect": [ "o-glyco-site-loss" ], "start_pos": 7488, "end_pos": 7488, "subjects_tested": "4799", "subjects_positive": 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"MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant tumor of lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant tumor of the lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant tumour of lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "malignant tumour of the lung", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "nonsmall cell lung cancer, somatic", "description": "" }, { "id": "MONDO:0008903", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008903", "name": "nonsmall cell lung cancer, susceptibility to, autosomal dominant, somatic mutation", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility 1", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "LNCR1", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility", "description": "" }, { "id": "MONDO:0012159", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012159", "name": "lung cancer susceptibility 1", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "lung cancer susceptibility 3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "LNCR3", "description": "" }, { "id": "MONDO:0012942", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012942", "name": "lung cancer susceptibility 3", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "lung cancer susceptibility 4", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "LNCR4", "description": "" }, { "id": "MONDO:0012955", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012955", "name": "lung cancer susceptibility 4", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "lung cancer susceptibility 5", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "LNCR5", "description": "" }, { "id": "MONDO:0013631", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013631", "name": "lung cancer susceptibility 5", "description": "" }, { "id": "MIM:211980", "resource": "MIM", "url": "https://www.omim.org/entry/211980", "name": "Lung cancer", "description": "Lung cancer" } ], "unlinked_id_list": [ "DOID:4765" ], "evidence": [ { "id": "1324", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:1324" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease" ] } ] } }