{ "uniprot_canonical_ac": "A0A0R4IXD9-1", "uniprot_ac": "A0A0R4IXD9", "uniprot_id": "A0A0R4IXD9_DANRE", "mass": { "chemical_mass": 133010.0, "monoisotopic_mass": 133010.0 }, "refseq": {}, "gene_names": [ { "name": "tbcd", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9", "id": "A0A0R4IXD9" } ], "protein_names": [ { "name": "Tubulin-specific chaperone D", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9/entry#names_and_taxonomy", "id": "A0A0R4IXD9" }, { "name": "Beta-tubulin cofactor D", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9/entry#names_and_taxonomy", "id": "A0A0R4IXD9" }, { "name": "Tubulin-folding cofactor D", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9/entry#names_and_taxonomy", "id": "A0A0R4IXD9" } ], "function": [ { "annotation": "Tubulin-folding protein implicated in the first step of the tubulin folding pathway and required for tubulin complex assembly. Involved in the regulation of microtubule polymerization or depolymerization, it modulates microtubule dynamics by capturing GTP-bound beta-tubulin (TUBB). Its ability to interact with beta tubulin is regulated via its interaction with ARL2. Acts as a GTPase-activating protein (GAP) for ARL2. Induces microtubule disruption in absence of ARL2. Increases degradation of beta tubulin, when overexpressed in polarized cells. Promotes epithelial cell detachment, a process antagonized by ARL2. Induces tight adherens and tight junctions disassembly at the lateral cell membrane. Required for correct assembly and maintenance of the mitotic spindle, and proper progression of mitosis. Involved in neuron morphogenesis.", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9#function" }, { "database": "UniProtKB", "id": "ARBA00057349", "url": "https://www.uniprot.org/uniprotkb/ARBA00057349#function" } ] } ], "disease": [ { "disease_id": "DOID:0070423", "recommended_name": { "id": "DOID:0070423", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0070423", "name": "early onset progressive encephalopathy with brain atrophy and thin corpus callosum", "description": "An autosomal recessive intellectual developmental disorder characterized by onset at birth or in infancy of developmental delay, intellectual disability, seizures, secondary hypomyelination, cerebral atrophy, and thin corpus callosum that has_material_basis_in homozygous or compound heterozygous mutation in the TBCD gene on chromosome 17q25." }, "synonyms": [ { "id": "DOID:0070423", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0070423", "name": "PEBAT", "description": "" }, { "id": "DOID:0070423", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0070423", "name": "early-onset progressive encephalopathy with brain atrophy and thin corpus callosum", "description": "" }, { "id": "MONDO:0044646", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0044646", "name": "early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome", "description": "" }, { "id": "MONDO:0044646", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0044646", "name": "PEBAT", "description": "" }, { "id": "MONDO:0044646", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0044646", "name": "encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum", "description": "" }, { "id": "MONDO:0044646", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0044646", "name": "encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum; PEBAT", "description": "" }, { "id": "MIM:617193", "resource": "MIM", "url": "https://www.omim.org/entry/617193", "name": "Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum", "description": "Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum" } ], "unlinked_id_list": [], "evidence": [ { "id": "0070423", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0070423" } ] } ], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "gene": [ { "name": "tbcd", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9", "locus": {} } ], "crossref": [ { "id": "ZFIN:ZDB-GENE-060823-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-060823-1", "database": "AGR", "categories": [ "Protein Classification" ] }, { "id": "ENSDARG00000098749", "url": "https://bgee.org/?page=gene&gene_id=ENSDARG00000098749", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "553265", "url": "https://www.ncbi.nlm.nih.gov/gene/553265", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022577", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022577", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033162", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033162", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "dre:553265", "url": "https://www.genome.jp/dbget-bin/www_bget?dre:553265", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EPHEAWH", "url": "https://omabrowser.org/oma/group/EPHEAWH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A0R4IXD9", "url": "https://www.orthodb.org/?gene=A0A0R4IXD9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12658", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12658", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12658:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12658:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12612", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12612", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF23579", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23579", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "XP_001922584", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001922584", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A0R4IXD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "ZDB-GENE-060823-1", "url": "https://zfin.org/ZDB-GENE-060823-1", "database": "ZFIN", "categories": [ "Protein", "Organism-specific" ] } ], "sequence": { "sequence": "MSVMEGACNGEDAEVLAQACVLSEFTESTETRALISSLPDIHHDTVSREATIEKFVVIMDRYQEQPHLLDPHLEWMLNMLLEMIRSEKSPPLLVHLCFKFLYIISKVRGYKIFMQLFPHEVSDVQPVLDLLCRQDQKDTETWETRYILLLWLSMTCLIPFDLSRLDGHLSTVPGTNRESTMDRILEVAKSFLRVSDKSRDAASVLVSKFVTRPDVKQKRLGDFLDWCLTTISQSSEMTMEGTVILDGALQSLAQLFKHGKRDDFLQYAPTVLECLNQKKIAESNQATLRKLGVKVVQRLGLTFLKPRLAKWRYQRGSRSLAVNLAQSSVTESVEATKPDLESVSQEEDYDIPQEVENVIEQLLLGLKDKETIVRWSSAKGIGRVTGRLPKELADDVVESVLDCFSFQETDNAWHGGCLALAELGRRGLLLPSRLSDVVPLILKALTYDEKRGACSLGSNVRDAGCYVCWAFARAYEPTELKPYVNQIASSLVIATVFDRNVTCRKAASAAFQENVGRQGTFPHGIDIITAADYFTVGNLNNCYLTISVYIAGFEEYTKPLIDHLVAMKINHWDGAIRELATKALHNLTIQAPEYMANTVLPQLLPMATGMDLHSRHGAILACAEITHALYKLAAQNNRSVTDLMSSDTIEGLKDIHQKLSDRKQYRGFGGELMRPAVCSLIEKLSLSKMPFKDEPVIAGWQWLIDDSLKNLHLFSSGVRRGIQDAAVSALAALCWQYYQVEPGVADVKMQEELVSQYLSALQSPEVLTRCGCALALGSLPPFMIHNKLQQILSGLQATCRVAQKGESLTEARRDAATAMSQVCVAVGVCAQGRSDQVLCEDNIRPVYEALLGCMNDYSTDSRGDVGAWVRAAAMSSLMDVTLLVVASAPELLSSDLVLRMMCCLAQQAAEKIDRYRAHAGTVFLRLLHGTDPAVPHIPHHEELLSIFPPETGNSLNWNAASQAFPHITQLLRLPQYQYHTLLGLCVSVGGLTESTVRFSSQSLFDYLKGIQQDFTMLQQFGDTLLRIFRDNLRNDRVSVPLLKMVDQILANGCFDLFTRQESHPFCVELLSLCKEEIKKSKDVQKLLSCIAVFCGLVQFPGDVRKKVLVQLLMLLCHPFPLIRKTTASQVYEMLLTYDDVIEDEQVLADVMASLSDTNWESDIATVRSHRNQLCDWLGVPKPTLVAKTSPQ", "length": 1191, "header": "tr|A0A0R4IXD9-1|A0A0R4IXD9_DANRE Isoform 1 of Tubulin-specific chaperone D OS=Danio rerio OX=7955 GN=tbcd PE=1 SV=1 CANONICAL=A0A0R4IXD9-1" }, "isoforms": [ { "isoform_ac": "A0A0R4IXD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9/entry#A0A0R4IXD9-1", "sequence": { "sequence": "MSVMEGACNGEDAEVLAQACVLSEFTESTETRALISSLPDIHHDTVSREATIEKFVVIMDRYQEQPHLLDPHLEWMLNMLLEMIRSEKSPPLLVHLCFKFLYIISKVRGYKIFMQLFPHEVSDVQPVLDLLCRQDQKDTETWETRYILLLWLSMTCLIPFDLSRLDGHLSTVPGTNRESTMDRILEVAKSFLRVSDKSRDAASVLVSKFVTRPDVKQKRLGDFLDWCLTTISQSSEMTMEGTVILDGALQSLAQLFKHGKRDDFLQYAPTVLECLNQKKIAESNQATLRKLGVKVVQRLGLTFLKPRLAKWRYQRGSRSLAVNLAQSSVTESVEATKPDLESVSQEEDYDIPQEVENVIEQLLLGLKDKETIVRWSSAKGIGRVTGRLPKELADDVVESVLDCFSFQETDNAWHGGCLALAELGRRGLLLPSRLSDVVPLILKALTYDEKRGACSLGSNVRDAGCYVCWAFARAYEPTELKPYVNQIASSLVIATVFDRNVTCRKAASAAFQENVGRQGTFPHGIDIITAADYFTVGNLNNCYLTISVYIAGFEEYTKPLIDHLVAMKINHWDGAIRELATKALHNLTIQAPEYMANTVLPQLLPMATGMDLHSRHGAILACAEITHALYKLAAQNNRSVTDLMSSDTIEGLKDIHQKLSDRKQYRGFGGELMRPAVCSLIEKLSLSKMPFKDEPVIAGWQWLIDDSLKNLHLFSSGVRRGIQDAAVSALAALCWQYYQVEPGVADVKMQEELVSQYLSALQSPEVLTRCGCALALGSLPPFMIHNKLQQILSGLQATCRVAQKGESLTEARRDAATAMSQVCVAVGVCAQGRSDQVLCEDNIRPVYEALLGCMNDYSTDSRGDVGAWVRAAAMSSLMDVTLLVVASAPELLSSDLVLRMMCCLAQQAAEKIDRYRAHAGTVFLRLLHGTDPAVPHIPHHEELLSIFPPETGNSLNWNAASQAFPHITQLLRLPQYQYHTLLGLCVSVGGLTESTVRFSSQSLFDYLKGIQQDFTMLQQFGDTLLRIFRDNLRNDRVSVPLLKMVDQILANGCFDLFTRQESHPFCVELLSLCKEEIKKSKDVQKLLSCIAVFCGLVQFPGDVRKKVLVQLLMLLCHPFPLIRKTTASQVYEMLLTYDDVIEDEQVLADVMASLSDTNWESDIATVRSHRNQLCDWLGVPKPTLVAKTSPQ", "length": 1191, "header": "tr|A0A0R4IXD9-1|A0A0R4IXD9_DANRE Isoform 1 of Tubulin-specific chaperone D OS=Danio rerio OX=7955 GN=tbcd PE=1 SV=1 CANONICAL=A0A0R4IXD9-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "The zebrafish reference genome sequence and its relationship to the human genome.", "journal": "Nature", "date": "2013", "authors": "Howe Kerstin, Clark Matthew D, Torroja Carlos F, Torrance James, Berthelot Camille, Muffato Matthieu, Collins John E, Humphray Sean, McLaren Karen, Matthews Lucy, McLaren Stuart, Sealy Ian, Caccamo Mario, Churcher Carol, Scott Carol, Barrett Jeffrey C, Koch Romke, Rauch Gerd-J\u00f6rg, White Simon, Chow William, Kilian Britt, Quintais Leonor T, Guerra-Assun\u00e7\u00e3o Jos\u00e9 A, Zhou Yi, Gu Yong, Yen Jennifer, Vogel Jan-Hinnerk, Eyre Tina, Redmond Seth, Banerjee Ruby, Chi Jianxiang, Fu Beiyuan, Langley Elizabeth, Maguire Sean F, Laird Gavin K, Lloyd David, Kenyon Emma, Donaldson Sarah, Sehra Harminder, Almeida-King Jeff, Loveland Jane, Trevanion Stephen, Jones Matt, Quail Mike, Willey Dave, Hunt Adrienne, Burton John, Sims Sarah, McLay Kirsten, Plumb Bob, Davis Joy, Clee Chris, Oliver Karen, Clark Richard, Riddle Clare, Elliot David, Eliott David, Threadgold Glen, Harden Glenn, Ware Darren, Begum Sharmin, Mortimore Beverley, Mortimer Beverly, Kerry Giselle, Heath Paul, Phillimore Benjamin, Tracey Alan, Corby Nicole, Dunn Matthew, Johnson Christopher, Wood Jonathan, Clark Susan, Pelan Sarah, Griffiths Guy, Smith Michelle, Glithero Rebecca, Howden Philip, Barker Nicholas, Lloyd Christine, Stevens Christopher, Harley Joanna, Holt Karen, Panagiotidis Georgios, Lovell Jamieson, Beasley Helen, Henderson Carl, Gordon Daria, Auger Katherine, Wright Deborah, Collins Joanna, Raisen Claire, Dyer Lauren, Leung Kenric, Robertson Lauren, Ambridge Kirsty, Leongamornlert Daniel, McGuire Sarah, Gilderthorp Ruth, Griffiths Coline, Manthravadi Deepa, Nichol Sarah, Barker Gary, Whitehead Siobhan, Kay Michael, Brown Jacqueline, Murnane Clare, Gray Emma, Humphries Matthew, Sycamore Neil, Barker Darren, Saunders David, Wallis Justene, Babbage Anne, Hammond Sian, Mashreghi-Mohammadi Maryam, Barr Lucy, Martin Sancha, Wray Paul, Ellington Andrew, Matthews Nicholas, Ellwood Matthew, Woodmansey Rebecca, Clark Graham, Cooper James D, Cooper James, Tromans Anthony, Grafham Darren, Skuce Carl, Pandian Richard, Andrews Robert, Harrison Elliot, Kimberley Andrew, Garnett Jane, Fosker Nigel, Hall Rebekah, Garner Patrick, Kelly Daniel, Bird Christine, Palmer Sophie, Gehring Ines, Berger Andrea, Dooley Christopher M, Ersan-\u00dcr\u00fcn Z\u00fcbeyde, Eser Cigdem, Geiger Horst, Geisler Maria, Karotki Lena, Kirn Anette, Konantz Judith, Konantz Martina, Oberl\u00e4nder Martina, Rudolph-Geiger Silke, Teucke Mathias, Lanz Christa, Raddatz G\u00fcnter, Osoegawa Kazutoyo, Zhu Baoli, Rapp Amanda, Widaa Sara, Langford Cordelia, Yang Fengtang, Schuster Stephan C, Carter Nigel P, Harrow Jennifer, Ning Zemin, Herrero Javier, Searle Steve M J, Enright Anton, Geisler Robert, Plasterk Ronald H A, Lee Charles, Westerfield Monte, de Jong Pieter J, Zon Leonard I, Postlethwait John H, N\u00fcsslein-Volhard Christiane, Hubbard Tim J P, Roest Crollius Hugues, Rogers Jane, Stemple Derek L", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "reference": [ { "type": "PubMed", "id": "23594743", "url": "https://glygen.org/publication/PubMed/23594743" } ] } ], "pathway": [ { "id": "dre:553265", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?dre:553265", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZJB6-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "Tbcd", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVLSNEPAASAAEEEVEDDALVRASTLEAFGESAETRALLRSLPAVHRERAAREVAEERFRVIMDKYQEQPHLLDPHLEWMMNSLLDIVQDETSLPDLVHLAFKFLYIITKVRGYKVFLRLFPHEVADVQPVLDMFTGQNPKDHETWETRYMLLLWLSVTCLIPFDFSRLDGNLPTQSGETRMPIMDRILQIAQSYLVVSDKARDAAAVLVSKFITRPDVKQRKMASFLDWSLCTLAHSSFQTIDGVITMDGMLQALAQIFKHGKREDCLPYANTVLQCLDGCRLPESSHTLLRKLGVKLVQRLGLTFLKPKVATWRYQRGCRSLAANLQLRAPGKSEQKLLSDSLTSDGDEDYDVPEGVETVIEQLLVGLKDKDTIVRWSAAKGIGRMAGRLPRELADDVVGSVLDCFSFQETDKAWHGGCLALAELGRRGLLLPSRLSEVVTVILKALTYDEKRGACSVGANVRDAACYVCWAFARAYEPQELTPFVTAISSALVIAAVFDRNVNCRRAASAAFQENVGRQGTFPHGIDILTTADYFAVGNISNCFLIISVFIAGFQEYTKPMIDHLVSMKINHWDGAIRELSAKALHNLTSLVPEYMATHVFPALLLMTQSPDLHTRHGAILACAEVTYALYELAAQSNRLVTDYLDEKAVQSLKQIHQQVCVSYKSLFGKIMCCFFSFSFSIVCILIEKLSLSRMPFKGDTVIEGWQWLINDTLRSLHLVSSHSREQIKHCPGLPGRPLLNTSFFPEELIPQYLAELRSPEEMTRCGFSSALGALPCFLLRGHLQQVLSGLRRVTCTTSPMDVSFAEARRDGLKAISRICQTVGVNTQGPPDEVICQENISEVYAALLGCMSDYTTDSRGDVGAWVREASMTSLMDLMLLLAQTEPVLIEAHICERVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRKELESLFPRSDVATVNWNAPSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLESFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIKKSKDIQKLRSSIAVLCGMVQFSGDVRKKVLLQLFLLLGHPFPVIRKSTASQVYEMVLTYSDLVDAEVLDEVMSVLSDTAWDSELPVVRGQRNHLCDLLGVPRPQLVPKVILVVVPVLPVVLSSGLK", "length": 1205 }, "evidence": [ { "id": "HGNC:11581", "url": "https://alliancegenome.org/gene/HGNC:11581#orthology", "database": "AGR" }, { "id": "MGI:1919686", "url": "https://alliancegenome.org/gene/MGI:1919686#orthology", "database": "AGR" }, { "id": "A0A0R4IXD9", "url": "https://omabrowser.org/oma/group/A0A0R4IXD9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V1ANP8-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "TBCD", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAVGETDGAGSEESGSREADVISRGNILESFTESQEVRALLGNLRTVYGDPVAQEVIVEKFIVIMDKYQEQPHLLDRHLEWMMNMLLDIIRDSGSPPVLFHLAFKFLYIITKVRGYKLFLRLFPHEVTDLQPVLDMIVDQNPKDCETWETRYMLLLWLSMICLIPFDLARFDGNILSEEGHTRMPTMDRILEIAKCYLVVSDKARDAAAVLVSKFIVRPDVRQKRMADFLDWTLSMLSKSSFQSMEGTVVMNGMLQALAQLFKHGKREDCLPYAATVLECLDNCKLSESNQMVLRKLGMKLVQRLGLTFVKPKVAKWRYQRGCRSLAANLQAQSSVMQSQKITVAANEAEDDEEYDIPGEIENVVEQLLVGLKDKDTIVRWSAAKGIGRITGRLPKELADDVVGSLLDCFSFQETDNAWHGGCLALAELGRRGLLLPSRISDGGLHEVHACCLCVPLINLTRICKVMLLLYLEVVPVILKALTYDEKRGSCSVGSNVRDAACYLSWAFARAYDPSELIPFINQISSALVIAAVFDRDVNCRRAASAAFQENVGRQGTFPHGIDILTAADYFAVGNRVNCYLTISVYIAGFPEYTQPMIDHLVNMKINHWDSVIRELSTKALHNLTPRAPEYMANVVLPRLLPLSVGTDLHTRHGAILACAEITHALCKLAEENNRSITYYFNGKSLEGLKQIHQELCSRQLYRGLGGELMRPAVCTLIEKLSLSKMPFKGDPIIEGWQWLINDSLRSLPLASCAARQHVKESAVSALSALCNEYYINENGEADPALQGELVTQYISELQSTEQMIRCGFSLALGALPRFLLKGRLQQVLEGLRKVTLITPRDVSFAESRRDALIAIAEICQTVGVKGEGSQEEYICKDNVAQIYATLLNCVTDYTTDSRGDVGGWVREAAMTSLMKVTLLLVQNEAELINANICKQIMCWLAQQSAEKIDKFRAHAGSVFLTLLHFDSPPVPHIPHREELERIFPRSEAETLNWNAASEAFPRITQLLALPAYQYYVLLGLSVSVGGLTETTLRYSAQSLFDYMKNIQNDSSAMEGFCETLLKVFEDNLRNDRVSVPLLTMLDQMLANGCFDIFTTQGNHPFPVKLLHLCKEEIKRSKDVRKLRSSIGVFCGLIQFQGDMREKVLFQLLLLLCHPFPVIRKTTASQVYEMLITYSEIIDPAIVDEVMAILSDSNWEAEVAELREKRNRLCDLMKVPKPQLVTKPAGTHTGAHIS", "length": 1234 }, "evidence": [ { "id": "A0A0R4IXD9", "url": "https://omabrowser.org/oma/group/A0A0R4IXD9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P40987-1", "protein_name": "Chromosome instability protein 1", "gene_name": "CIN1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MNNIRALLDSIQSGVQTVSPEKHQQTIAAINKFQDDPALLDTILPRCVPLLTKSFFCMSQRDQKLVAELFYNLDKISHSKVLKSLDTSIFRLNEILNYLQDRASPSSFSDVLCVYLNLSWLSVILLSPYAFKDKFNKTLQVSSRFENYPICIPPINKIKAVLYFKNFTDAFDQLPEREQANVPFLNQFLKLFIQSSEKANYYFSNENLRHLQQVALSNDGIKLLPKLFQISFNHGSHDILDAIVEFFHDHLSSNSTDTRFQLAHSFAKIAKFLHQADPASFIELIDYTIENTVSLLQAPCDSIDSNELHTSLLIIAEVALAKILPIDLVDRVLTLIIPKTCHFQKSHFQIIKGHHIRDSTNFIIWSVIRSNRSNSLSPQVLQSLLSHLLINAFFDPELIIRYSSFAALQELLGRSNKSLALNQNDIALILQANWKDLPRSFEENSGLIRRLFNPENTSKSAVCVWKVFRDWSFNWNLLENLHLTTMKLNIDYNLVPLIKSKLSSPALLQEVLNKAGSSVTQNCQILYLYLKLFENDVNCPKISEICIDIYQKKIKFQLTTQAKRQFNDNSPELFQIFVILKYWQLTGQNDFNQELFWKFVDIVSPQKKLNLYNEFIPIIQQIISQCVSLNYTRIVQLIKSDNELTCRSICHMPDQEKMCSLFFSQFPLLSPQSRSLLIGELDHHWDVRISLLPSNSYRKFRNIIINCLDDYTITQQGDVGRLVRIQALKLMQSHPDFLSGDCDSINPKLTRLLAEPVPEIRKLSYQLLASATSQITVLSDSSILNFRHKQGLSEEFWKGYAVSAGAIHFTDSQLTSSIDSFIVYYRSLSPSQQLELCHDLIRIIPSAKQIAESRIRDRNKDPLTGGMRFDTIKFTIHCVKFWTRIMESGLVVLHPNFNFQGVFAKFYNLHLLDCTTLRVSVIKFFPFLAISCYHTMRENADQKNLSNIILKRLLVLVKREYAATKSKFMTDQNVALQGMFQIFLELGVTRQLQALQVACQKHELANILESDITL", "length": 1014 }, "evidence": [ { "id": "HGNC:11581", "url": "https://alliancegenome.org/gene/HGNC:11581#orthology", "database": "AGR" }, { "id": "MGI:1919686", "url": "https://alliancegenome.org/gene/MGI:1919686#orthology", "database": "AGR" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q8BYA0-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "Tbcd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLSNEPAASAAEEEVEDDALVRASALEAFGESAETRALLRSLPAVHRERASREVAEERFRVIMDKYQEQPHLLDPHLEWMMNSLLDLVQDETSLPDLVHLAFKFLYIITKVRGYKVFLRLFPHEVANVQPVLDMFTGQNPKDHETWETRYMLLLWLSVTCLIPFDFSRLDGNLSTQTGETRVPTMDRILQIAESYLVVSDKARDAAAVLVSKFITRPDVKQRKMASFLDWSLCTLAHSSFQTIEGVITMDGMLQALAQIFKHGKREDCLPYANTVLQCLDGCRLPESSHTSLRKLGVKLVQRLGLTFLKPKVATWRYQRGCRSLAANLKLCAPGKSDQKLLSDSLTSDGDEDYDVPEGVETVIEQLLVGLKDKDTVVRWSAAKGIGRMAGRLPRELADDVVGSVLDCFSFQETDKAWHGGCLALAELGRRGLLLPSRLSEVVTVILKALTYDEKRGACSVGANVRDAACYVCWAFARAYEPQELTPFVTAISSALVIAAVFDRNVNCRRAASAAFQENVGRQGTFPHGIDILTTADYFAVGNISNCFLIISVFIAGFQEYTKPMIDHLVSMKINHWDGAIRELSAKALHNLTPQVPEYIAMHVFPALLLMTQSPDLHTRHGAILACAEVTYALYKLATQSNRLVTDYLDEKAVQSLKQIHQQLCDRHLYRGLGGELMRQAVCILIEKLSLSRMPFKGDATVEGWQWLINDTLRSLHLVSSHSRQQIKEVAVSALTALCSEYYVKEPGEAGSSIAKELIPQYLAELQSPEEMARCGFSSALGALPGFLLRGHLQQVLSGLRRVTCISPNDVSFAEARRDGLKAISRICQTVGVNTRGPPDEVICKENISEVYAALLGCMSDYTTDSRGDVGAWVREAAMTSLMDLMLLLARTEPVLIEAHICERVMCCVAQQASEKIDRFRAHAARVFLTLLHFDSPPIPHVPHRQELESLFPRSDVATVNWNAPSQAFPLITQLLGLPTYRYHVLLGLAVSVGGLTESTVRHSTQSLFEYMKGIQKDAQVLQSFSETLLKVFEDNLLNDRVSVSLLKMLDQLLANGCFDIFTAEENHPFCVKLLTLCKEEIKKSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYSDLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGVPRPQLVPKPIPGS", "length": 1196 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-060823-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-060823-1#orthology", "database": "AGR" }, { "id": "HGNC:11581", "url": "https://alliancegenome.org/gene/HGNC:11581#orthology", "database": "AGR" }, { "id": "MGI:1919686", "url": "https://alliancegenome.org/gene/MGI:1919686#orthology", "database": "AGR" }, { "id": "A0A0R4IXD9", "url": "https://omabrowser.org/oma/group/A0A0R4IXD9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8L5R3-1", "protein_name": "Tubulin-folding cofactor D", "gene_name": "TFCD", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASRAEEMSPTKIEIETAVKIEEEEDDEHDSKERVLQRYFLQEWKLVKSLLDDIVSNGRVVDPTSVHKIRSIMDKYQEQGQLVEPYLESIVSPLMFIIRSKTVDLEAKPDEILEIIKPISIIIYALVTVCGYKAVIKFFPHQVSDLELAVLLLEKCHSTNSVSALRQESTGEMEAKCVTLLWLSILVLVPFDISSVDTSIADDKTFGVDDLAPLVLKILGFCKDYLCSAGPMRRISGLLLSKLLTRPDMGKAFSSFFEWTYEVLSCKEDSVTNHFRLLGVMEALSAIFKTASRKVLLDVLPIVLNDVTVLSKSNAAAKSSLLRKYLIKLTQRIGLVCLPHRSPSWRYVAQTASLSENMSTSSSQRLAPDHTVTAILQPESLDDQEDEDMDVPEILEEIIEMLLSGLRDTDTVVRWSAAKGIGRVTSRLTSVLSDEVLSSVLELFSPGEGDGSWHGGCLALAELARRGLLLPRSFPLVVPVIVKALHYDVRRGPHSVGSHVRDAAAYVCWAFGRAYSHKDMKNVLDQLAPDLLIVGSFDREVNCRRAAAAAFQENVGRQGNYPHGIDIVSIADYFSLSSRVNSYLQVAVSIAQYEGYLYPFVDELLYNKICHWDKSLRELAAEALAPLVKYEPKHFANYVLEKLIPCTLSTDLCMRHGATLAAGEVVLALHQCGYVLSADSQKRMAGIVPSIEKARLYRGKGGEIMRLAVSRFIECISLSHVTLAERTERILLDTLTENLRHPNSQIQNAAVSAVKQLVQSYLVGNDKKSVDLILKHLKHLTDPNVAVRRGSALALGVLPYELLTAKWKDIVLKLCSACKIEVNPEDRDAEARVNAVKGLTSVCETLTQKRASDPGNDDLSLFLLIKTEVMDTLLKALDDYSVDNRGDVGSWVREAAVHGLEKCTYILCKKMETYSEGDYNDDTSSLFDSNLATRLIGGMLKQGVEKMDKLRETAAKVLQRILYHKSVSVPHVPYREKLEEILPNKANLQWAVPAFSFPRFVQLLKLRCYSKEVMSGLVISIGGLQDSLRKASLVALLEYMREGEAKDPKEQQSRESALGDDILWILQEYKKCDRVMVPCLQTIEILFSSKIFLNQESYTFSFYAGVMDSLAIELRASKDFTKLKAGLAILGYIASVSHFISTKAFSQLLSFLGHRYPMIRKAAAEQVYLALLQNGILVTEEKMEKVIEIISESCWEADMETTKTQRLELCELAGLDHEVVFKTRNRLVIKDIAGNKSAADENASYSSLVDSSGF", "length": 1254 }, "evidence": [ { "id": "A0A0R4IXD9", "url": "https://omabrowser.org/oma/group/A0A0R4IXD9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9BTW9-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "TBCD", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALSDEPAAGGPEEEAEDETLAFGAALEAFGESAETRALLGRLREVHGGGAEREVALERFRVIMDKYQEQPHLLDPHLEWMMNLLLDIVQDQTSPASLVHLAFKFLYIITKVRGYKTFLRLFPHEVADVEPVLDLVTIQNPKDHEAWETRYMLLLWLSVTCLIPFDFSRLDGNLLTQPGQARMSIMDRILQIAESYLIVSDKARDAAAVLVSRFITRPDVKQSKMAEFLDWSLCNLARSSFQTMQGVITMDGTLQALAQIFKHGKREDCLPYAATVLRCLDGCRLPESNQTLLRKLGVKLVQRLGLTFLKPKVAAWRYQRGCRSLAANLQLLTQGQSEQKPLILTEDDDEDDDVPEGVERVIEQLLVGLKDKDTVVRWSAAKGIGRMAGRLPRALADDVVGSVLDCFSFQETDKAWHGGCLALAELGRRGLLLPSRLVDVVAVILKALTYDEKRGACSVGTNVRDAACYVCWAFARAYEPQELKPFVTAISSALVIAAVFDRDINCRRAASAAFQENVGRQGTFPHGIDILTTADYFAVGNRSNCFLVISVFIAGFPEYTQPMIDHLVTMKISHWDGVIRELAARALHNLAQQAPEFSATQVFPRLLSMTLSPDLHMRHGSILACAEVAYALYKLAAQENRPVTDHLDEQAVQGLKQIHQQLYDRQLYRGLGGQLMRQAVCVLIEKLSLSKMPFRGDTVIDGWQWLINDTLRHLHLISSHSRQQMKDAAVSALAALCSEYYMKEPGEADPAIQEELITQYLAELRNPEEMTRCGFSLALGALPGFLLKGRLQQVLTGLRAVTHTSPEDVSFAESRRDGLKAIARICQTVGVKAGAPDEAVCGENVSQIYCALLGCMDDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCERIMCCVAQQASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTIRHSTQSLFEYMKGIQSDPQALGSFSGTLLQIFEDNLLNERVSVPLLKTLDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIKNSKDIQKLLSGIAVFCEMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDVVGADVLDEVVTVLSDTAWDAELAVVREQRNRLCDLLGVPRPQLVPQPGAC", "length": 1192 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-060823-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-060823-1#orthology", "database": "AGR" }, { "id": "HGNC:11581", "url": "https://alliancegenome.org/gene/HGNC:11581#orthology", "database": "AGR" }, { "id": "MGI:1919686", "url": "https://alliancegenome.org/gene/MGI:1919686#orthology", "database": "AGR" }, { "id": "A0A0R4IXD9", "url": "https://omabrowser.org/oma/group/A0A0R4IXD9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VQ78-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "Tbcd", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSNSVEECKDEDLPANTLEHFTELQQVLEMIDNIKSIAANTFEREFEQYAQVLSRYQEQPHLLDPHLEELLGKLLHKIRKPDLDTGELHAAFKYLYIICKVRTYKVLVKFMPHELSDLEFVLDLLGQQNPKEFEQWETRYILLLWMSILVLNPFHMSRLDAYDTSTSAPTTNCSPVNHVQSKNTKMDRIFELIQLYVSSNDTCSSMAAFLAAKYFIRSDIKDLYLERFLDWIMEQHQADTLNVKFGQLAAVAAILKHGKREDLLPYADKLLQWITSCQYKDDNDFLKYKNYVKIIQRIGLVHLKPRIASWRYKRGTRSLATNLNQTTAAGGEPVVLEQSLEEGEEIVVPDAIEEVIEELLQALRSGGNDIRWSAAKGLGRVTNRLPKELADEVIGSVIDILNPLEPHEAWHGACLALAELAKRGLLLPHRLEELVPLLMQALFYDEMKGYMSVGQHIRDSACYMCWAFARAYNPDDVKPFVHKISSGLLTVAVFDREVNCRRAASAAFQESVGRLGNFPFGIEISTTTDFYSVGIRQNSYLNISDYIAQFEVYREPLINHLVQHKVSHWDSAIRELTAKALHKLSLWEPEYMAAVVLPQLLAKTDTIDINCRHGCVLAMGEITLTLRKLEEKSDPQVVYLSNQRVAELNELIITFLDKNFYRGMSGDLMKSCTSSYIKNCSLAKLQATPECLVSWQKVIDSCLITKSNAIRDGAVEAFGELCTTYYCSDSRHGENEAIINTYLTGADNDLEEHIRMGYIAALGVLPSFMIRCHLQAILDSLVKHSLTPLQAVLVGEMGDRENIQAYRWSEARTQSVLALTKLVKTVGYGGGIDSFAEPKNFNKVIECLLRALQEYTLDNRGDIGAWVREAAMSSLYEIVTTCPPDLLAPEQVHEIVVGFMQQAVEKIDRTRGLGGRLCCQLIHHQPRIPYIREHSKLLEIFPADADSVLWLFADHTFPLFCELLSLPDYSKRVLLGLSASIGQLTESLIKYASSALFHFLRSNPETVPRLCSEVVQIFEEHLLNERVTYPLLSFLDILIGSGTVESVLHDEANPFAEDIFRLLNLEVKGYKKLYKTATSISAFCQLLQVPRLSKRILSKLSVFLGLQHVHVRKTAATKLYEALALHGDVTEVPEENMDEILTLLSETDWTQPLVEVRPLRNQLCQLMDIKPPVSGAAAAAALQQASADK", "length": 1189 }, "evidence": [ { "id": "HGNC:11581", "url": "https://alliancegenome.org/gene/HGNC:11581#orthology", "database": "AGR" }, { "id": "MGI:1919686", "url": "https://alliancegenome.org/gene/MGI:1919686#orthology", "database": "AGR" }, { "id": "A0A0R4IXD9", "url": "https://omabrowser.org/oma/group/A0A0R4IXD9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" }, { "name": "beta-tubulin binding", "id": "GO:0048487", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048487", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "brain development", "id": "GO:0007420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007420", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" }, { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" }, { "name": "retina layer formation", "id": "GO:0010842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010842", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" }, { "name": "bicellular tight junction assembly", "id": "GO:0070830", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070830", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" }, { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" }, { "name": "tubulin complex assembly", "id": "GO:0007021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007021", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" }, { "name": "adherens junction assembly", "id": "GO:0034333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034333", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" }, { "name": "post-chaperonin tubulin folding pathway", "id": "GO:0007023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007023", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "lateral plasma membrane", "id": "GO:0016328", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016328", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IXD9", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IXD9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 500, "end_pos": 502, "annotation": "n_glycosylation_sequon" }, { "start_pos": 586, "end_pos": 588, "annotation": "n_glycosylation_sequon" }, { "start_pos": 637, "end_pos": 639, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.agr", "label": "AGR Homologs" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 500, "end_pos": 502 }, { "start_pos": 586, "end_pos": 588 }, { "start_pos": 637, "end_pos": 639 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }