{ "uniprot_canonical_ac": "A0A0R4IM99-1", "uniprot_ac": "A0A0R4IM99", "uniprot_id": "A0A0R4IM99_DANRE", "mass": { "chemical_mass": 32716.0, "monoisotopic_mass": 32716.0 }, "refseq": {}, "gene_names": [ { "name": "tpm2", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99", "id": "A0A0R4IM99" }, { "name": "cb836", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99", "id": "A0A0R4IM99" }, { "name": "fj63f03", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99", "id": "A0A0R4IM99" }, { "name": "tpm4l", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99", "id": "A0A0R4IM99" }, { "name": "wu:fj63f03", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99", "id": "A0A0R4IM99" }, { "name": "zgc:86810", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99", "id": "A0A0R4IM99" } ], "protein_names": [ { "name": "Tropomyosin 2 (beta)", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#names_and_taxonomy", "id": "A0A0R4IM99" }, { "name": "Tropomyosin beta chain isoform X1", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#names_and_taxonomy", "id": "A0A0R4IM99" } ], "function": [], "disease": [ { "disease_id": "DOID:0110932", "recommended_name": { "id": "DOID:0110932", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0110932", "name": "nemaline myopathy 4", "description": "A nemaline myopathy that has_material_basis_in heterozygous mutation in the TPM2 gene on chromosome 9p13." }, "synonyms": [ { "id": "DOID:0110932", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0110932", "name": "NEM4", "description": "" }, { "id": "DOID:0110932", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0110932", "name": "nemaline myopathy 4, autosomal dominant", "description": "" }, { "id": "DOID:0110932", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0110932", "name": "CAP myopathy 2", "description": "" }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "congenital myopathy 23", "description": "Any nemaline myopathy in which the cause of the disease is a mutation in the TPM2 gene." }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "CAPM2", "description": "" }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "NEM4", "description": "" }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "TPM2 nemaline myopathy", "description": "" }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "cap myopathy 2", "description": "" }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "nemaline myopathy 4", "description": "" }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "nemaline myopathy 4, autosomal dominant", "description": "" }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "nemaline myopathy caused by mutation in TPM2", "description": "" }, { "id": "MONDO:0012240", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012240", "name": "nemaline myopathy type 4", "description": "" }, { "id": "MIM:609285", "resource": "MIM", "url": "https://www.omim.org/entry/609285", "name": "Congenital myopathy 23", "description": "Congenital myopathy 23" } ], "unlinked_id_list": [], "evidence": [ { "id": "0110932", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0110932" } ] }, { "disease_id": "DOID:0111597", "recommended_name": { "id": "DOID:0111597", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0111597", "name": "distal arthrogryposis type 1A", "description": "A distal arthrogryposis type 1 that has_material_basis_in heterozygous mutation in the TPM2 gene on chromosome 9p13.3." }, "synonyms": [ { "id": "DOID:0111597", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:0111597", "name": "DA1A", "description": "" }, { "id": "MONDO:0007157", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007157", "name": "arthrogryposis, distal, type 1A", "description": "" }, { "id": "MONDO:0007157", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007157", "name": "arthrogryposis multiplex congenita", "description": "" }, { "id": "MONDO:0007157", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007157", "name": "AMC", "description": "" }, { "id": "MONDO:0007157", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007157", "name": "DA1A", "description": "" }, { "id": "MONDO:0007157", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007157", "name": "arthrogryposis, distal, type 1A", "description": "" }, { "id": "MONDO:0007157", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007157", "name": "arthrogryposis multiplex congenita, distal, type 1", "description": "" }, { "id": "MONDO:0007157", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007157", "name": "arthrogryposis, distal, type 1", "description": "" }, { "id": "MONDO:0007157", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007157", "name": "arthrogryposis, distal, type 2B4", "description": "" }, { "id": "MIM:108120", "resource": "MIM", "url": "https://www.omim.org/entry/108120", "name": "Arthrogryposis, distal, 1A", "description": "Arthrogryposis, distal, 1A" } ], "unlinked_id_list": [], "evidence": [ { "id": "0111597", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0111597" } ] }, { "disease_id": "DOID:12930", "recommended_name": { "id": "DOID:12930", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:12930", "name": "dilated cardiomyopathy", "description": "An intrinsic cardiomyopathy that is characterized by an an enlarged heart and damage to the myocardium causing the heart to pump blood inefficiently." }, "synonyms": [ { "id": "DOID:12930", "resource": "Disease Ontology", "url": "http://disease-ontology.org/term/DOID:12930", "name": "primary dilated cardiomyopathy", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "dilated cardiomyopathy 1A", "description": "Familial dilated cardiomyopathy with conduction defect due to LMNA mutation is a rare familial dilated cardiomyopathy characterized by left ventricular enlargement and/or reduced systolic function preceded or accompanied by significant conduction system disease and/or arrhythmias including bradyarrhythmias, supraventricular or ventricular arrhythmias. Disease onset is usually in early to mid-adulthood. Sudden cardiac death may occur and may be the presenting symptom. In some cases, it is associated with skeletal myopathy and elevated serum creatine kinase." }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "CDCD1", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "LMNA familial isolated dilated cardiomyopathy", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "cardiomyopathy dilated with conduction defect type 1", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "cardiomyopathy, dilated, type 1A", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "dilated cardiomyopathy 1A", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "dilated cardiomyopathy type 1A", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "dilated cardiomyopathy with conduction defect 1", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "familial dilated cardiomyopathy with conduction defect due to LMNA mutation", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "familial isolated dilated cardiomyopathy caused by mutation in LMNA", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "cardiomyopathy, congestive", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "cardiomyopathy, dilated, 1A", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "cardiomyopathy, dilated, with conduction defect 1", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "cardiomyopathy, familial idiopathic", "description": "" }, { "id": "MONDO:0007269", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007269", "name": "cardiomyopathy, idiopathic dilated", "description": "" }, { "id": "MIM:115200", "resource": "MIM", "url": "https://www.omim.org/entry/115200", "name": "Cardiomyopathy, dilated, 1A", "description": "Cardiomyopathy, dilated, 1A" } ], "unlinked_id_list": [], "evidence": [ { "id": "12930", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:12930" } ] } ], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IM99", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "gene": [ { "name": "tpm2", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99", "locus": {} } ], "crossref": [ { "id": "ZFIN:ZDB-GENE-040625-114", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-040625-114", "database": "AGR", "categories": [ "Protein Classification" ] }, { "id": "ENSDARG00000104682", "url": "https://bgee.org/?page=gene&gene_id=ENSDARG00000104682", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "415209", "url": "https://www.ncbi.nlm.nih.gov/gene/415209", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000533", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000533", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014751", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014751", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "dre:415209", "url": "https://www.genome.jp/dbget-bin/www_bget?dre:415209", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WDETARY", "url": "https://omabrowser.org/oma/group/WDETARY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A0R4IAL5", "url": "https://www.orthodb.org/?gene=A0A0R4IAL5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A0R4IM99", "url": "https://www.orthodb.org/?gene=A0A0R4IM99", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A8M2B1K3", "url": "https://www.orthodb.org/?gene=A0A8M2B1K3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A8M2B1Q6", "url": "https://www.orthodb.org/?gene=A0A8M2B1Q6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A8M2B1Q8", "url": "https://www.orthodb.org/?gene=A0A8M2B1Q8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A8M2B255", "url": "https://www.orthodb.org/?gene=A0A8M2B255", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A8M2B2D1", "url": "https://www.orthodb.org/?gene=A0A8M2B2D1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q6IQD7", "url": "https://www.orthodb.org/?gene=Q6IQD7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19269", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19269", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00261", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00261", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "XP_005155551", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005155551", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A0R4IAL5", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IAL5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A0R4IAL5-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IAL5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A0R4IM99", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A0R4IM99-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B1K3", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B1K3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B1K3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B1K3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B1Q6", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B1Q6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B1Q6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B1Q6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B1Q8", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B1Q8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B1Q8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B1Q8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B255", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B255", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B255-1", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B255-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B2D1", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B2D1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8M2B2D1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8M2B2D1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q6IQD7-1", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "ZDB-GENE-040625-114", "url": "https://zfin.org/ZDB-GENE-040625-114", "database": "ZFIN", "categories": [ "Protein", "Organism-specific" ] } ], "sequence": { "sequence": "MEAIKKKMQMLKLDKENAIDRAEQAEIDKKGAEDKCKQLEEELLALQKKLKGVEDELDKYSESLKDAQEKLEQAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEEKVAQAKEENLNMHQVLDQTLLELNNL", "length": 284, "header": "tr|A0A0R4IM99-1|A0A0R4IM99_DANRE Isoform 1 of Tropomyosin beta chain isoform X1 OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "isoforms": [ { "isoform_ac": "A0A0R4IAL5-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#A0A0R4IAL5-1", "sequence": { "sequence": "MASITSIEAVKRKIQTLQQQADDAEDRAEMLQREVDLERQCRERAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEARVRQLEEELRLMDQNLKSMMAGEEEYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEEKVAQAKEENLNMHQVLDQTLLELNNL", "length": 248, "header": "tr|A0A0R4IAL5-1|A0A0R4IAL5_DANRE Computationally mapped isoform of Tropomyosin beta chain isoform X7 OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "locus": {} }, { "isoform_ac": "A0A0R4IM99-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#A0A0R4IM99-1", "sequence": { "sequence": "MEAIKKKMQMLKLDKENAIDRAEQAEIDKKGAEDKCKQLEEELLALQKKLKGVEDELDKYSESLKDAQEKLEQAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEEKVAQAKEENLNMHQVLDQTLLELNNL", "length": 284, "header": "tr|A0A0R4IM99-1|A0A0R4IM99_DANRE Isoform 1 of Tropomyosin beta chain isoform X1 OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "locus": {} }, { "isoform_ac": "A0A8M2B1K3-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#A0A8M2B1K3-1", "sequence": { "sequence": "MEAIKKKMQMLKLDKENAIDRAEQAEIDKKGAEDKCKQLEEELLALQKKLKGVEDELDKYSESLKDAQEKLEQAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEARVRQLEEELRLMDQNLKSMMAGEEEYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL", "length": 284, "header": "tr|A0A8M2B1K3-1|A0A8M2B1K3_DANRE Computationally mapped isoform of Tropomyosin beta chain isoform X2 OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "locus": {} }, { "isoform_ac": "A0A8M2B1Q6-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#A0A8M2B1Q6-1", "sequence": { "sequence": "MEAIKKKMQMLKLDKENAIDRAEQAEIDKKGAEDKCKQLEEELLALQKKLKGVEDELDKYSESLKDAQEKLEQAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEARVRQLEEELRLMDQNLKSMMAGEEEYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEEKVAQAKEENLNMHQVLDQTLLELNNL", "length": 284, "header": "tr|A0A8M2B1Q6-1|A0A8M2B1Q6_DANRE Computationally mapped isoform of Tropomyosin beta chain isoform X3 OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "locus": {} }, { "isoform_ac": "A0A8M2B1Q8-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#A0A8M2B1Q8-1", "sequence": { "sequence": "MASITSIEAVKRKIQTLQQQADDAEDRAEMLQREVDLERQCRERAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL", "length": 248, "header": "tr|A0A8M2B1Q8-1|A0A8M2B1Q8_DANRE Computationally mapped isoform of Tropomyosin alpha-1 chain OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "locus": {} }, { "isoform_ac": "A0A8M2B255-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#A0A8M2B255-1", "sequence": { "sequence": "MASITSIEAVKRKIQTLQQQADDAEDRAEMLQREVDLERQCRERAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEEKVAQAKEENLNMHQVLDQTLLELNNL", "length": 248, "header": "tr|A0A8M2B255-1|A0A8M2B255_DANRE Computationally mapped isoform of Tropomyosin beta chain isoform X5 OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "locus": {} }, { "isoform_ac": "A0A8M2B2D1-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#A0A8M2B2D1-1", "sequence": { "sequence": "MASITSIEAVKRKIQTLQQQADDAEDRAEMLQREVDLERQCRERAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEARVRQLEEELRLMDQNLKSMMAGEEEYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL", "length": 248, "header": "tr|A0A8M2B2D1-1|A0A8M2B2D1_DANRE Computationally mapped isoform of Tropomyosin alpha-1 chain OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "locus": {} }, { "isoform_ac": "Q6IQD7-1", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99/entry#Q6IQD7-1", "sequence": { "sequence": "MEAIKKKMQMLKLDKENAIDRAEQAEIDKKGAEDKCKQLEEELLALQKKLKGVEDELDKYSESLKDAQEKLEQAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL", "length": 284, "header": "tr|Q6IQD7-1|Q6IQD7_DANRE Computationally mapped isoform of Tropomyosin beta chain OS=Danio rerio OX=7955 GN=tpm2 PE=1 SV=1 CANONICAL=A0A0R4IM99-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Stable isotope labeling in zebrafish allows in vivo monitoring of cardiac morphogenesis.", "journal": "Mol. Cell. Proteomics", "date": "2013", "authors": "Konzer Anne, Ruhs Aaron, Braun Helene, Jungblut Benno, Braun Thomas, Kr\u00fcger Marcus", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "23412571", "url": "https://glygen.org/publication/PubMed/23412571" } ] }, { "title": "Novel deletion of lysine 7 expands the clinical, histopathological and genetic spectrum of TPM2-related myopathies.", "journal": "Brain", "date": "2013", "authors": "Davidson Ann E, Siddiqui Fazeel M, Lopez Michael A, Lunt Peter, Carlson Heather A, Moore Brian E, Love Seth, Born Donald E, Roper Helen, Majumdar Anirban, Jayadev Suman, Underhill Hunter R, Smith Corrine O, von der Hagen Maja, Hubner Angela, Jardine Philip, Merrison Andria, Curtis Elizabeth, Cullup Thomas, Jungbluth Heinz, Cox Mary O, Winder Thomas L, Abdel Salam Hossam, Li Jun Z, Moore Steven A, Dowling James J", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "23413262", "url": "https://glygen.org/publication/PubMed/23413262" } ] }, { "title": "The zebrafish reference genome sequence and its relationship to the human genome.", "journal": "Nature", "date": "2013", "authors": "Howe Kerstin, Clark Matthew D, Torroja Carlos F, Torrance James, Berthelot Camille, Muffato Matthieu, Collins John E, Humphray Sean, McLaren Karen, Matthews Lucy, McLaren Stuart, Sealy Ian, Caccamo Mario, Churcher Carol, Scott Carol, Barrett Jeffrey C, Koch Romke, Rauch Gerd-J\u00f6rg, White Simon, Chow William, Kilian Britt, Quintais Leonor T, Guerra-Assun\u00e7\u00e3o Jos\u00e9 A, Zhou Yi, Gu Yong, Yen Jennifer, Vogel Jan-Hinnerk, Eyre Tina, Redmond Seth, Banerjee Ruby, Chi Jianxiang, Fu Beiyuan, Langley Elizabeth, Maguire Sean F, Laird Gavin K, Lloyd David, Kenyon Emma, Donaldson Sarah, Sehra Harminder, Almeida-King Jeff, Loveland Jane, Trevanion Stephen, Jones Matt, Quail Mike, Willey Dave, Hunt Adrienne, Burton John, Sims Sarah, McLay Kirsten, Plumb Bob, Davis Joy, Clee Chris, Oliver Karen, Clark Richard, Riddle Clare, Elliot David, Eliott David, Threadgold Glen, Harden Glenn, Ware Darren, Begum Sharmin, Mortimore Beverley, Mortimer Beverly, Kerry Giselle, Heath Paul, Phillimore Benjamin, Tracey Alan, Corby Nicole, Dunn Matthew, Johnson Christopher, Wood Jonathan, Clark Susan, Pelan Sarah, Griffiths Guy, Smith Michelle, Glithero Rebecca, Howden Philip, Barker Nicholas, Lloyd Christine, Stevens Christopher, Harley Joanna, Holt Karen, Panagiotidis Georgios, Lovell Jamieson, Beasley Helen, Henderson Carl, Gordon Daria, Auger Katherine, Wright Deborah, Collins Joanna, Raisen Claire, Dyer Lauren, Leung Kenric, Robertson Lauren, Ambridge Kirsty, Leongamornlert Daniel, McGuire Sarah, Gilderthorp Ruth, Griffiths Coline, Manthravadi Deepa, Nichol Sarah, Barker Gary, Whitehead Siobhan, Kay Michael, Brown Jacqueline, Murnane Clare, Gray Emma, Humphries Matthew, Sycamore Neil, Barker Darren, Saunders David, Wallis Justene, Babbage Anne, Hammond Sian, Mashreghi-Mohammadi Maryam, Barr Lucy, Martin Sancha, Wray Paul, Ellington Andrew, Matthews Nicholas, Ellwood Matthew, Woodmansey Rebecca, Clark Graham, Cooper James D, Cooper James, Tromans Anthony, Grafham Darren, Skuce Carl, Pandian Richard, Andrews Robert, Harrison Elliot, Kimberley Andrew, Garnett Jane, Fosker Nigel, Hall Rebekah, Garner Patrick, Kelly Daniel, Bird Christine, Palmer Sophie, Gehring Ines, Berger Andrea, Dooley Christopher M, Ersan-\u00dcr\u00fcn Z\u00fcbeyde, Eser Cigdem, Geiger Horst, Geisler Maria, Karotki Lena, Kirn Anette, Konantz Judith, Konantz Martina, Oberl\u00e4nder Martina, Rudolph-Geiger Silke, Teucke Mathias, Lanz Christa, Raddatz G\u00fcnter, Osoegawa Kazutoyo, Zhu Baoli, Rapp Amanda, Widaa Sara, Langford Cordelia, Yang Fengtang, Schuster Stephan C, Carter Nigel P, Harrow Jennifer, Ning Zemin, Herrero Javier, Searle Steve M J, Enright Anton, Geisler Robert, Plasterk Ronald H A, Lee Charles, Westerfield Monte, de Jong Pieter J, Zon Leonard I, Postlethwait John H, N\u00fcsslein-Volhard Christiane, Hubbard Tim J P, Roest Crollius Hugues, Rogers Jane, Stemple Derek L", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IM99", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99" } ], "reference": [ { "type": "PubMed", "id": "23594743", "url": "https://glygen.org/publication/PubMed/23594743" } ] }, { "title": "Post-transcriptional regulation of myotube elongation and myogenesis by Hoi Polloi.", "journal": "Development", "date": "2013", "authors": "Johnson Aaron N, Mokalled Mayssa H, Valera Juliana M, Poss Kenneth D, Olson Eric N", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "23942517", "url": "https://glygen.org/publication/PubMed/23942517" } ] }, { "title": "Global protein expression profiling of zebrafish organs based on in vivo incorporation of stable isotopes.", "journal": "J. Proteome Res.", "date": "2014", "authors": "Nolte Hendrik, Konzer Anne, Ruhs Aaron, Jungblut Benno, Braun Thomas, Kr\u00fcger Marcus", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "24611545", "url": "https://glygen.org/publication/PubMed/24611545" } ] }, { "title": "Genome-wide RNA Tomography in the zebrafish embryo.", "journal": "Cell", "date": "2014", "authors": "Junker Jan Philipp, No\u00ebl Emily S, Guryev Victor, Peterson Kevin A, Shah Gopi, Huisken Jan, McMahon Andrew P, Berezikov Eugene, Bakkers Jeroen, van Oudenaarden Alexander", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "25417113", "url": "https://glygen.org/publication/PubMed/25417113" } ] }, { "title": "Evolution of complexity in the zebrafish synapse proteome.", "journal": "Nat. Commun.", "date": "2017", "authors": "Bayes A, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "28252024", "url": "https://glygen.org/publication/PubMed/28252024" } ] }, { "title": "First profiling of lysine crotonylation of myofilament proteins and ribosomal proteins in zebrafish embryos.", "journal": "Sci. Rep.", "date": "2018", "authors": "Kwon Oh Kwang, Kim Sun Joo, Lee Sangkyu", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "29483630", "url": "https://glygen.org/publication/PubMed/29483630" } ] }, { "title": "A combined FSTRA-shotgun proteomics approach to identify molecular changes in zebrafish upon chemical exposure.", "journal": "Sci. Rep.", "date": "2019", "authors": "Ayobahan Steve U, Eilebrecht Elke, Kotthoff Matthias, Baumann Lisa, Eilebrecht Sebastian, Teigeler Matthias, Hollert Henner, Kalkhof Stefan, Sch\u00e4fers Christoph", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "31036921", "url": "https://glygen.org/publication/PubMed/31036921" } ] }, { "title": "Molecular characterization of the prostaglandin E receptor subtypes 2a and 4b and their expression patterns during embryogenesis in zebrafish.", "journal": "Int. J. Dev. Biol.", "date": "2021", "authors": "Han Yongjun, Chang Hongbo, Wu Hong", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "34549801", "url": "https://glygen.org/publication/PubMed/34549801" } ] }, { "title": "Single-cell transcriptome reveals insights into the development and function of the zebrafish ovary.", "journal": "Elife", "date": "2022", "authors": "Liu Yulong, Kossack Michelle E, McFaul Matthew E, Christensen Lana N, Siebert Stefan, Wyatt Sydney R, Kamei Caramai N, Horst Samuel, Arroyo Nayeli, Drummond Iain A, Juliano Celina E, Draper Bruce W", "evidence": [ { "database": "UniProtKB", "id": "Q6IQD7", "url": "https://www.uniprot.org/uniprotkb/Q6IQD7" } ], "reference": [ { "type": "PubMed", "id": "35588359", "url": "https://glygen.org/publication/PubMed/35588359" } ] } ], "pathway": [ { "id": "dre:415209", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?dre:415209", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1L6UW65-1", "protein_name": "Tropomyosin alpha-1 chain", "gene_name": "tpm4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEAIKKKMQMLKLDKENAIDRAEQAESDKKAAEDKCKQLEDELLGLQKKLKATEDELDKYSEALKDAQEKLELSEKKASDAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGIKVIENRAMKDEEKMEIQEIQLKEAKHIAEDSDRKYEEVARKLVILEGELERAEERAEIAELKGGDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEDEIKVLTDKLKEVETRAEFAERTVAKLEKTIDDLEDELYAQKLRFKAISEELDHALTDMSSL", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A2R8Q650-1", "protein_name": "Tropomyosin alpha-3 chain isoform X3", "gene_name": "tpm3", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEAVKKKMMMLKLDKENALDQAEQAETDRKAAEERSKQHEDELIQMQKKLKGTEDELDKYSEALKDAQEKLEISEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTEERAELAESHVKQMEEELRALDQTLKTLQASEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEEKLRDAKEENIKIHATLDQTLSELNSF", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB32TFB7-1", "protein_name": "Tropomyosin alpha-1 chain isoform X17", "gene_name": "tpm1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDAIKKKMQMLKLDKENALDRAEQAEGDKKAAEDRSKQLEDELIQLEKRLRVTEDERDKVLEEYQSVEEKLLTAEEVATKLEDDLLALQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTEERAELNERCNRRLQDELRVLDQTYKSLKASEEQYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYSQKLKYKAISEELDHALNDMTSM", "length": 326 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D3Z2H9-1", "protein_name": "Tropomyosin 3, related sequence 7", "gene_name": "Tpm3-rs7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGTTTIEAVKRKIQVLQQQADDAEERAERLQQEVEGERRARKQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM", "length": 248 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1R412-1", "protein_name": "Tropomyosin 4a", "gene_name": "tpm4a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEAIKKKMQMLKLDKENAIDRAEQAETEQKAAEDKCKQLDDELVGLQKKLKQTEDELDKYSEALKDAQEKLELSEKKAADAEGDVAALNRRIQLVEEELDRAQERLGTALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVAECKASDLEEELKNVTNNLKSLEAQAEKYSEKEDKYEEEIKVLSDKLKEAETRAEFAERTVAKLEKSIDDLEEKLSSAKEENLGMHQVLDQTLQELNSL", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P04692-1", "protein_name": "Tropomyosin alpha-1 chain", "gene_name": "Tpm1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 285 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P07951-1", "protein_name": "Tropomyosin beta chain", "gene_name": "TPM2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "MGI:98810", "url": "https://alliancegenome.org/gene/MGI:98810#orthology", "database": "AGR" }, { "id": "RGD:1559479", "url": "https://alliancegenome.org/gene/RGD:1559479#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-040625-114", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-040625-114#orthology", "database": "AGR" }, { "id": "HGNC:12011", "url": "https://alliancegenome.org/gene/HGNC:12011#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P09491-1", "protein_name": "Tropomyosin-2", "gene_name": "Tm2", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDAIKKKMQAMKLEKDNAIDKADTCENQAKDANSRADKLNEEVRDLEKKFVQVEIDLVTAKEQLEKANTELEEKEKLLTATESEVATQNRKVQQIEEDLEKSEERSTTAQQKLLEATQSADENNRMCKVLENRSQQDEERMDQLTNQLKEARMLAEDADTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELEEELKVVGNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRAEHAEKQVKRLQKEVDRLEDRLFNEKEKYKAICDDLDQTFAELTGY", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "MGI:98810", "url": "https://alliancegenome.org/gene/MGI:98810#orthology", "database": "AGR" }, { "id": "RGD:1559479", "url": "https://alliancegenome.org/gene/RGD:1559479#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-040625-114", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-040625-114#orthology", "database": "AGR" }, { "id": "HGNC:12011", "url": "https://alliancegenome.org/gene/HGNC:12011#orthology", "database": "AGR" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P09493-1", "protein_name": "Tropomyosin alpha-1 chain", "gene_name": "TPM1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P09495-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "Tpm4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGLNSLEAVKRKIQALQQQADDAEDRAQGLQRELDGERERREKAEGDAAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKSSDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVSKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNELNCI", "length": 248 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13104-1", "protein_name": "Tropomyosin alpha-1 chain", "gene_name": "tpma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDAIKKKMQMLKLDKENALDRAEQAETDKKAAEERSKQLEDDLVALQKKLKATEDELDKYSEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTEERAELNEGKCSELEEELKTVTNNMKSLEAQAEKYSAKEDKYEEEIKVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P17536-1", "protein_name": "Tropomyosin-1", "gene_name": "TPM1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDKIREKLSNLKLEAESWQEKYEELKEKNKDLEQENVEKENQIKSLTVKNQQLEDEIEKLEAGLSDSKQTEQDNVEKENQIKSLTVKNHQLEEEIEKLEAELAESKQLSEDSHHLQSNNDNFSKKNQQLEEDLEESDTKLKETTEKLRESDLKADQLERRVAALEEQREEWERKNEELTVKYEDAKKELDEIAASLENL", "length": 199 }, "evidence": [ { "id": "MGI:98810", "url": "https://alliancegenome.org/gene/MGI:98810#orthology", "database": "AGR" }, { "id": "RGD:1559479", "url": "https://alliancegenome.org/gene/RGD:1559479#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-040625-114", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-040625-114#orthology", "database": "AGR" }, { "id": "HGNC:12011", "url": "https://alliancegenome.org/gene/HGNC:12011#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P21107-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "Tpm3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEAIKKKMQMLKLDKENVLDRAEQAEAEQKQAEERSKQLEDELATMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISDELDHALNDMTSI", "length": 285 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P49455-1", "protein_name": "Tropomyosin-1, isoforms 33/34", "gene_name": "Tm1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDAIKKKMQAMKVDKDGALERALVCEQEARDANTRAEKAEEEARQLQKKIQTVENELDQTQEALTLVTGKLEEKNKALQNAESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQAADESERARKILENRALADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLERAEERAEQGENKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLNTRLKEAEARAEFAERSVQKLQKEVDRLEDDLIVEKERYCMIGDSLDEAFVDLIKGLEPFWNPRNPKPPTPKLPTPTPEELAAMEEARAAAEAAAAAEAEAAEAAAAAGEAGPDGAPAAPGEEKAPAKEPTPPKEPTPPPPPPPPFEYSIDLPPEGAEVPYVKNYEPPPPGSEPEPVPAAEGEAAPAAEGAAPPAEGAAPPAEGAVPPADGAAPPAEGAAPAAEGAAPPADGAAPPAEAAAAPADAAAPAAEAAPAEAPAAEATAAEAPPAEAAPAEAAPAAAEGEAPPA", "length": 518 }, "evidence": [ { "id": "MGI:98810", "url": "https://alliancegenome.org/gene/MGI:98810#orthology", "database": "AGR" }, { "id": "RGD:1559479", "url": "https://alliancegenome.org/gene/RGD:1559479#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-040625-114", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-040625-114#orthology", "database": "AGR" }, { "id": "HGNC:12011", "url": "https://alliancegenome.org/gene/HGNC:12011#orthology", "database": "AGR" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P58771-1", "protein_name": "Tropomyosin alpha-1 chain", "gene_name": "Tpm1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P58774-1", "protein_name": "Tropomyosin beta chain", "gene_name": "Tpm2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKYSESVKDAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "MGI:98810", "url": "https://alliancegenome.org/gene/MGI:98810#orthology", "database": "AGR" }, { "id": "RGD:1559479", "url": "https://alliancegenome.org/gene/RGD:1559479#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-040625-114", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-040625-114#orthology", "database": "AGR" }, { "id": "HGNC:12011", "url": "https://alliancegenome.org/gene/HGNC:12011#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P58775-1", "protein_name": "Tropomyosin beta chain", "gene_name": "Tpm2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKYSESVKDAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL", "length": 284 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "MGI:98810", "url": "https://alliancegenome.org/gene/MGI:98810#orthology", "database": "AGR" }, { "id": "RGD:1559479", "url": "https://alliancegenome.org/gene/RGD:1559479#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-040625-114", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-040625-114#orthology", "database": "AGR" }, { "id": "HGNC:12011", "url": "https://alliancegenome.org/gene/HGNC:12011#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGLNSLEAVKRKIQALQQQADEAEDRAQGLQRELDGERERREKAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNELNCI", "length": 248 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q63610-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "Tpm3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGSTTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM", "length": 248 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6IRU2-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "Tpm4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGLNSLEAVKRKIQALQQQADDAEDRAQGLQRELDGERERREKAEGDAAALNRRIQLLEEELDRAQEQLATALQNLEEAEKAADESERGMKVIENRAMKDEEKMEILEMQLKEAKHITDEADRKYEEVARKLVILEGELKRAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVSKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNELNCI", "length": 248 }, "evidence": [ { "id": "FB:FBgn0004117", "url": "https://alliancegenome.org/gene/FB:FBgn0004117#orthology", "database": "AGR" }, { "id": "FB:FBgn0003721", "url": "https://alliancegenome.org/gene/FB:FBgn0003721#orthology", "database": "AGR" }, { "id": "SGD:S000005023", "url": "https://alliancegenome.org/gene/SGD:S000005023#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "actin filament", "id": "GO:0005884", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005884", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IM99", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99" } ], "pmid": "" }, { "name": "striated muscle thin filament", "id": "GO:0005865", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005865", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IM99", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "muscle contraction", "id": "GO:0006936", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006936", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IM99", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99" } ], "pmid": "" }, { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IM99", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "actin filament binding", "id": "GO:0051015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051015", "evidence": [ { "database": "UniProtKB", "id": "A0A0R4IM99", "url": "https://www.uniprot.org/uniprotkb/A0A0R4IM99" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.agr", "label": "AGR Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 199, "end_pos": 201 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }