{ "uniprot_canonical_ac": "A0A0G2KB94-1", "uniprot_ac": "A0A0G2KB94", "uniprot_id": "A0A0G2KB94_RAT", "mass": { "chemical_mass": 79654.0, "monoisotopic_mass": 79654.0 }, "refseq": {}, "gene_names": [ { "name": "Ccdc142", "resource": "UniProtKB", "type": "recommended", "url": "https://www.uniprot.org/uniprotkb/A0A0G2KB94", "id": "A0A0G2KB94" } ], "protein_names": [ { "name": "Coiled-coil domain containing 142", "resource": "UniProtKB", "type": "synonym", "url": "https://www.uniprot.org/uniprotkb/A0A0G2KB94/entry#names_and_taxonomy", "id": "A0A0G2KB94" } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "A0A0G2KB94", "url": "https://www.uniprot.org/uniprotkb/A0A0G2KB94" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "gene": [ { "name": "Ccdc142", "url": "https://www.uniprot.org/uniprotkb/A0A0G2KB94", "locus": { "chromosome": "4", "start_pos": 115616216, "end_pos": 115608485, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSRNOG00000058785", "url": "https://www.ensembl.org/id/ENSRNOG00000058785" } ] } } ], "crossref": [ { "id": "RGD:1561779", "url": "https://alliancegenome.org/gene/RGD:1561779", "database": "AGR", "categories": [ "Protein Classification" ] }, { "id": "A0A0G2KB94", "url": "https://alphafold.ebi.ac.uk/entry/A0A0G2KB94", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSRNOG00000058785", "url": "https://bgee.org/?page=gene&gene_id=ENSRNOG00000058785", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "297380", "url": "https://www.ncbi.nlm.nih.gov/gene/297380", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026700", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026700", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055350", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055350", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056901", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056901", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "rno:297380", "url": "https://www.genome.jp/dbget-bin/www_bget?rno:297380", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CCCVCNE", "url": "https://omabrowser.org/oma/group/CCCVCNE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A0G2KB94", "url": "https://www.orthodb.org/?gene=A0A0G2KB94", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21436", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21436", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21436:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21436:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14923", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14923", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "PF25081", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25081", "database": "Pfam", "categories": [ "Protein Classification" ] }, { "id": "XP_001072498", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001072498", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "1561779", "url": "http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=1561779", "database": "RGD", "categories": [ "Organism-specific" ] }, { "id": "A0A0G2KB94", "url": "https://www.uniprot.org/uniprotkb/A0A0G2KB94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A0G2KB94-1", "url": "https://www.uniprot.org/uniprotkb/A0A0G2KB94-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARASRSSGLLPPITNVPPSWAQPLGDGEERGKGKRGGLELLAAMSAPCPDSGRQPWAPESASGPMPFALQRLRAELLRLHREREQLLRARDCARHLQAVVRLLRSGSSAGSFSLQQLHGDLQMCPSRRAAQRLGFPGSRETLLLARPVGLAAQHLDANIEMQLRTLGRAPASLGLTSQLAELLLALPFYHTLQGQSLSFVPGAARPFPAARVLHLLAAERGCQVADRLAEALGRSGLQDQLRRQCDQERELLPGLLGLIGGVASRDSSGLRLGGPGALWSQYWTMLWAACAQSLDLRVGPWGDPKAVAQQLSQALCQASLPQECEKELLSLCHSLFHRSLVCSWDQGFCQALGSAVGGQSSPASPSTAELLQRLFPPLLDILRQPRPELSLCQPAGPTPVALGLCTLQTTLLWFLGKAQQHLAAWAPGPFLLLIQKDLPPLLHAVEALSSLASEAAFSLEVEQQLGLEIQKLTARMQLLPKESLSLFFQECHKQATQGFKLHMPRGGYWRLRLCPEHPSDPSEYARVVVYTVLEPVLQGLRGLPPEAQAPALSQALTATLGAWLDHILTHGIRFSLQGALQLKQDFGVVREVLEQEQWGLSPELRQTLLSLSIFQQLDGALLCLLQQPLPKNPVQRRPHRCCFCNEVQTIELPTSSLNSLESLAPPLRPGVSPAQNTHLLSTLGGGGRGGGGGGPSPEAYLAGNQQAWLALRLHQHPRWHLPFFSCLGTSPEP", "length": 734, "header": "tr|A0A0G2KB94-1|A0A0G2KB94_RAT Isoform 1 of Coiled-coil domain containing 142 OS=Rattus norvegicus OX=10116 GN=Ccdc142 PE=4 SV=1 CANONICAL=A0A0G2KB94-1" }, "isoforms": [ { "isoform_ac": "A0A0G2KB94-1", "url": "https://www.uniprot.org/uniprotkb/A0A0G2KB94/entry#A0A0G2KB94-1", "sequence": { "sequence": "MARASRSSGLLPPITNVPPSWAQPLGDGEERGKGKRGGLELLAAMSAPCPDSGRQPWAPESASGPMPFALQRLRAELLRLHREREQLLRARDCARHLQAVVRLLRSGSSAGSFSLQQLHGDLQMCPSRRAAQRLGFPGSRETLLLARPVGLAAQHLDANIEMQLRTLGRAPASLGLTSQLAELLLALPFYHTLQGQSLSFVPGAARPFPAARVLHLLAAERGCQVADRLAEALGRSGLQDQLRRQCDQERELLPGLLGLIGGVASRDSSGLRLGGPGALWSQYWTMLWAACAQSLDLRVGPWGDPKAVAQQLSQALCQASLPQECEKELLSLCHSLFHRSLVCSWDQGFCQALGSAVGGQSSPASPSTAELLQRLFPPLLDILRQPRPELSLCQPAGPTPVALGLCTLQTTLLWFLGKAQQHLAAWAPGPFLLLIQKDLPPLLHAVEALSSLASEAAFSLEVEQQLGLEIQKLTARMQLLPKESLSLFFQECHKQATQGFKLHMPRGGYWRLRLCPEHPSDPSEYARVVVYTVLEPVLQGLRGLPPEAQAPALSQALTATLGAWLDHILTHGIRFSLQGALQLKQDFGVVREVLEQEQWGLSPELRQTLLSLSIFQQLDGALLCLLQQPLPKNPVQRRPHRCCFCNEVQTIELPTSSLNSLESLAPPLRPGVSPAQNTHLLSTLGGGGRGGGGGGPSPEAYLAGNQQAWLALRLHQHPRWHLPFFSCLGTSPEP", "length": 734, "header": "tr|A0A0G2KB94-1|A0A0G2KB94_RAT Isoform 1 of Coiled-coil domain containing 142 OS=Rattus norvegicus OX=10116 GN=Ccdc142 PE=4 SV=1 CANONICAL=A0A0G2KB94-1" }, "locus": { "chromosome": "4", "start_pos": 115614569, "end_pos": 115608541, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSRNOT00000082806.2", "url": "https://www.ensembl.org/id/ENSRNOT00000082806.2" }, { "database": "Ensembl Peptide", "id": "ENSRNOP00000075704.1", "url": "https://www.ensembl.org/id/ENSRNOP00000075704.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "start_pos": 399, "start_aa": "Thr", "end_pos": 399, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr399", "evidence": [ { "id": "GLY_001157", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001157" } ], "filter_code": "00000000000000001000.00000000001000.0.xxxxx" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [], "pathway": [ { "id": "rno:297380", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?rno:297380", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9TFM8-1", "protein_name": "Coiled-coil domain containing 142", "gene_name": "CCDC142", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAQASRCGGLLPPLAAVPPLRAQPGGAEEEQWQKKRDVRGWPGLPVARSILCQDPRPDGAPKEQPWWVAPADAGEHSEAGAVDWGQELAAGGLIPPALRRLRAVLLRLQREREQLLQARDCALHLQAAVRFLRILSPGAPSPSHGLLLQLCRDLLQHLSGGAILRSRLLEMPHPLLLARPVGLAAQRLDATVEMRLRALGRAPATPALSSQLADLLLALPAYHQLQGKVFSQVPASARPYPPGRVLRLLTGERGCQVADWLDEALRGSGLRDQLLRRCQEERELLPGLLGLLGGVTGSASSELGLGGAGALWSQYWTLLWAACAQSLDLSLGPWRDSRAAAQQLSQALGQASLPQECEKELASLCRNLTHQSLIWSWDQGFCQVLGSASGNQSSLPSSSCTTKLLQQLFPPLLDALREPRSGLLLCGPPGPAPLALGLCTLQTTLLWFWSRTQQHLAAWAPGSFLLLIQKDLPPLLQEAEALSHLASEESLALDVEQQLGLEIRKLTVQIQLLPEESLSLFFQECHKQATQDFELHMPRGRYWRHRLCSELPSIPSEYAGLVVRRVLEPVLQGLHGLPPQAQAPALSQALTAILGAWLDHILSHGIRFSLQGALQLRQDFGVVRDLLEEEQWGLSPELRQTLFMLSIFQRLDGALLCLLQQPLPKTQVHRRLPRCCACNEVQTMELPSSSLNSLESLEPPLRPGVFPTQTAQLLSTLWGGGPSPDAYLVGNQQAWLALRQHQHPRWHLSFLSCLGTSSES", "length": 760 }, "evidence": [ { "id": "A0A0G2KB94", "url": "https://omabrowser.org/oma/group/A0A0G2KB94/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7EYV9-1", "protein_name": "Coiled-coil domain-containing 142", "gene_name": "ccdc142", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAHSSGSSQDGQTDSKTESHTQAVPDKTDSSAAESPENQHCDNGQRPSYYSEILPDEYISNEKFDASWYQSSFTKSLQRAEALFRNRLNPSLKRLMRQKSKDGSWESESESIGSCSSRSIQRLGETLQNLSSQCHILHDPAGGRSFGCIRGLSSSEEEEFYYHPQAAAFTQHYCQLQHLMDQRAQLLFFHEYARRTQMATCFVAQLGSVLEKTQLLLPDKGQVTEQPNSTWNLNLRALCQEMQVHVSHWDLLWAKAHSDLRLRRALFSRIETLSSMQRTLCLLALQAMQLLEQCIYTALLALTAAQLDRVPRDALVDLLCAVELYNEIVEDTESQCKTSTQSSKLMFNSDWPQLGSSTIRKATGPTIFPVEQLMMILAQSRAQKVAKQLYTWASQQSNLLLANNPKELKGHTKLNSRLLSSPTINLHTVQLEPQAAVEDTPQSPLHKLWSSNLPFSLFISRDRACLDTLFKVLVTSTNLLAPHIPKKPPLDRTVDLEDSVVICRRASDGEEKLLNRPRMSSRAHDAAAVDLRKSDACVKLFSNYKNLLWKQFGKAVIRHFYYQPYNSTLGSINQWNDEMLLLLVSWLKHSYFEDLIPEECKESLSDFCFYLLSTAAFTQWDEMKCLSLGSGLKEKCVPGAKLEGCAIRTATMDLILQLFLPLHTVLQLLQHPDIESGDIESKSLKRNHLALLCRSVATVHSSTIWVMSKAFQFLASWSITKFLLVTQGDLKDLKDSVESLVHLTRAVIRDSAVHPLIVQQTDSLSKALTELQAFSDLVLRTFTMDCKKMSTEIFEQTMPSARHWRINHKTELPSSPSDYAACAVQSVIGQVLEGVQPLPDNARVPALTEAMTAFMEAWMEHILKQKIKFSIQGALQLKQDFDLIRDMIRSEEYSLSEELHQKLLSLRVFHQVDNAIVCLLQQPMAKPYLPSRGWEPFRHCCPNSAQVMDQAAAGSLNNLESMDIQAACQQALTQAESSLTPELLSSTPQESYLAAAQQEWLDLRIHSGSRWKLPVLQCFTRSEP", "length": 1024 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-030131-6705", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-030131-6705#orthology", "database": "AGR" }, { "id": "RGD:1561779", "url": "https://alliancegenome.org/gene/RGD:1561779#orthology", "database": "AGR" }, { "id": "HGNC:25889", "url": "https://alliancegenome.org/gene/HGNC:25889#orthology", "database": "AGR" }, { "id": "MGI:3045292", "url": "https://alliancegenome.org/gene/MGI:3045292#orthology", "database": "AGR" }, { "id": "FB:FBgn0039009", "url": "https://alliancegenome.org/gene/FB:FBgn0039009#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q17RM4-1", "protein_name": "Coiled-coil domain-containing protein 142", "gene_name": "CCDC142", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQASRSGSLPPLVIVPPLRAQPGGTGEEQWERSRTGGLRWEVHCWPSGTSGGTPWWPTPADVSEDYEADAAAWRRGPAGGGPIPPALQRLRAVLLRLHREREQLLQARDCAYHLQSAVRLMKTLSPGSPSGGPSPLPQWCRDLQLHPSQGAVLRIGPGETLEPLLLARPIGLAAQCLEAVIEMQLRALGREPASPGLSSQLAELLFALPAYHTLQRKALSHVPGAARPFPTSRVLRLLTGERGCQVASRLDEALQGSALRDQLRRRCQEEGDLLPGLLGLVGGVAGSASCGLGLGGAGALWSQYWTLLWAACAQSLDLNLGPWRDPRATAQQLSQALGQASLPQECEKELASLCHRLLHQSLIWSWDQGFCQALGSALGGQSSLPTSSGTAELLQQLFPPLLDALREPRLRRIFCQPADPAPVALGLCTLQTTLLWFLGRAQQYLAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQQLGLEIQKLTAQIQLLPEESLSVFSQECHKQAMQGFKLYMPRGRYWRLRLCPEPPSAPSEYAGLVVRTVLEPVLQGLQGLPPQAQAPALGQALTAIVGAWLDHILTHGIRFSLQGALQLKQDFGVVRELLEEEQWSLSPDLRQTLLMLSIFQQLDGALLCLLQQPLPKSQVHRRPPCCCACQEVQTTKLPSSCLNSLESLEPPLQPGTSPAQTGQLQSTLGGRGPSPEGYLVGNQQAWLALRQHQRPRWHLPFFSCLGTSPES", "length": 750 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-030131-6705", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-030131-6705#orthology", "database": "AGR" }, { "id": "RGD:1561779", "url": "https://alliancegenome.org/gene/RGD:1561779#orthology", "database": "AGR" }, { "id": "HGNC:25889", "url": "https://alliancegenome.org/gene/HGNC:25889#orthology", "database": "AGR" }, { "id": "MGI:3045292", "url": "https://alliancegenome.org/gene/MGI:3045292#orthology", "database": "AGR" }, { "id": "FB:FBgn0039009", "url": "https://alliancegenome.org/gene/FB:FBgn0039009#orthology", "database": "AGR" }, { "id": "A0A0G2KB94", "url": "https://omabrowser.org/oma/group/A0A0G2KB94/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CAI1-1", "protein_name": "Coiled-coil domain-containing protein 142", "gene_name": "Ccdc142", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MARASSSSGPLPPLANVPSSWAQPVGAGEERDEGRRGGLGLLAAVSVPCPDFSRQPWAPASASGPMPFALQRLRATLLRLHREREQLLRARDCARHLQAVVRLLRSGSSAGSLSLQQLHGDLQLCPSRGAALRLGFPGSRETLLLTRPVGLAAQHLEAAIEMQLRSLGRTPASLGLTSQLAELLLALPFYHTLQGHSLNFVPGAARPFPAARVLQLLAAERGCQVADKLAEARGGSGLQEQLRRQCEQERELLPGLLGLVGGVASTDSSGLRLGGPGALWSQYWTLLWAACAKCLDLRVGPWEDPRAMAQELSQALCQAPLPQECEKELLSLCHSLFHQSVICSWDQGFCQALGSALGGQSSPASLSPTSELLQRLFPPLLDSLRQPRPELRLCPPAGPTPVALGLCTLQTTLLWFVGRAQQHLAAWDPGSFLLLLQKDLPPLLSAVEALSSLASEAALTLEVEQQLGLEIHNLTEKMQLLPKESLGLFVQECHKQATQGFKLHMPRGRYWRLRLCPEPPSDPSEYARIVVYSVLEPVLQGLQGLPPEAQAPALGQALTATLGAWLDHILTHGIRFSLQGALQLKQDFGVVREVLEQEQWGLSQELRQTLLSLSIFQQLDGALLCLLQQPLPKNPVHRRPPRCCLCYEVQTTELPTSSLNSLENLAPPLRLGVSPAQNTHLLSTLGGGGRGGGGGGGPGPSPEAYLVGNQQAWLALRLHQHPRWHLPFFSCLRTSPEP", "length": 738 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-030131-6705", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-030131-6705#orthology", "database": "AGR" }, { "id": "RGD:1561779", "url": "https://alliancegenome.org/gene/RGD:1561779#orthology", "database": "AGR" }, { "id": "HGNC:25889", "url": "https://alliancegenome.org/gene/HGNC:25889#orthology", "database": "AGR" }, { "id": "MGI:3045292", "url": "https://alliancegenome.org/gene/MGI:3045292#orthology", "database": "AGR" }, { "id": "FB:FBgn0039009", "url": "https://alliancegenome.org/gene/FB:FBgn0039009#orthology", "database": "AGR" }, { "id": "A0A0G2KB94", "url": "https://omabrowser.org/oma/group/A0A0G2KB94/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VCV8-1", "protein_name": "Coiled-coil protein 142 C-terminal domain-containing protein", "gene_name": "Dmel\\CG13842", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSTTPKWYCRNKSQPMHTFAEIGKLGLELRRITKRIVIDVNSAIFSEHDTILEECERVVEQYWNLKDETKNADFQSLSKKIKRSPYNQLLMKKFHLIMDLNDRRFCQLTFVLKRTLSFLLRKSMQSEMWLNWALHITQLYNKCRKVEKPLVPVEVDKPPGDEELEEEPKLSGKRKEEMPANVCSNMYPALLLALKSIDFGYVLQLVAQTRVEQNALDLVFGLFNMGEQDAWREQQNLESTSSSLEILRTLNISFAAGDYQPYCDSAQDYKSMQMQMAEESPQDQDRQSLRCKHTESFLQKERVFIAQLIAKATEISPTIFDNGKKGPVDMNAYIVKGLRLLWSYVGIILDHILLWWIDNPVSCYRLTHIDSIRSWLYHQSVNDIPEPVFSTLRGIGEILTGFVCNTIWDQLFRLTLISSNNTNRLVDVVAEQYRDCPKNEFGTPTGTVWISIFANLVNLSNQYFSNLEAHNNSSLMPVAEQIPILHRLDHSVHSMRLWVTEQAKLLCCEWKMDRFFQILEHDVKLCLNVFITFQLPKLTADLSDILMLVCVALRTKLIAEVNANIDKLKKTTDECVQILSAVCRVLSLANFTLCFPAASFWQREVYNNDEKSLYVGYVLDEIYLPTIRATKDIVILKLILKLICEAWLDFIYQKRIRFSVNGAVRLLNDFDDVREWILACSLLDEEQLDKLSNHEVLRMCKGVGKILLRKPEDVISITQSPKYDKKAQDASAQDTQLPSEMFVSNQKHWLQLRASGGNGFPFLKLCCGDIGM", "length": 772 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-030131-6705", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-030131-6705#orthology", "database": "AGR" }, { "id": "RGD:1561779", "url": "https://alliancegenome.org/gene/RGD:1561779#orthology", "database": "AGR" }, { "id": "HGNC:25889", "url": "https://alliancegenome.org/gene/HGNC:25889#orthology", "database": "AGR" }, { "id": "MGI:3045292", "url": "https://alliancegenome.org/gene/MGI:3045292#orthology", "database": "AGR" }, { "id": "FB:FBgn0039009", "url": "https://alliancegenome.org/gene/FB:FBgn0039009#orthology", "database": "AGR" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A0G2KB94-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 734, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A0G2KB94-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A0G2KB94" } ], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" }, { "name": "homologset.agr", "label": "AGR Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 399 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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