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"ZFIN:ZDB-GENE-041001-7", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-7#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-11", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-11#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-42", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-42#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-40", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-40#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-28", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-28#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8I6G465-1", "protein_name": "T cell receptor alpha variable 34 like", "gene_name": "Trav34l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGMLLQVLVGLLMFPAVWVNTQKLQQSPQSLTIQEGDELTMSCNSSSSLYALHWYRQGRDGGPIFLVTLQKGGDEKRKDKITAKLDKKMRQSFLSIQASQPSYAGTYLCAGSAQWSIDCRGLSPNLQLGHSCSDTGPLRQD", "length": 141 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-070108-3", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-070108-3#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-16", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-16#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-8", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-8#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-4", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-4#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-6", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-6#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-7", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-7#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-11", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-11#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-40", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-40#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-28", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-28#orthology", "database": "AGR" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GMF6-1", "protein_name": "Signal-regulatory protein alpha like 1", "gene_name": "Sirpal1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLLDTWANILHSALLLVLLLELKVFQDSHKDQAPHLLATYVKEGLHPDYGCTSFGDSESESTKDSVADMKELKVIQPKKSVCVDAGGSVTLNCTVTSLTPVGPIKWFRGVGHSRHLIYYFTGYHFSRITNASDATKRGNLDFSIHISNVTPADAGTYYCVKFQKGIVEPDIEIQSGGGTELSVFVADMKELKVFQPKKSVCVDAGGSVTLNCTVTSLTPVGPIKWYRGVGHNRHLIYNFTGYRFPRVTNASDATKRGNLDFSIHISNVTPADAGTYYCVKFQKGIVEPDIEIQSGGGTELLVFELKTSHIAKILAAALIGCKLLLVIAVTLIYRHRCKMLE", "length": 342 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-020225-5", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-5#orthology", "database": "AGR" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9QGL5-1", "protein_name": "Novel immune-type receptor 1m isoform X1", "gene_name": "nitr1m", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRYYFILLSSTIFCSFGVEVVQENNVKIAAAGEDVNLPCTFSRLLQATKAWFKQTADGKSLQIVSLYLDQIPNWNNNSENGFNIMKEDGYFNLTILKTKPSDSATYYCVISTAYNIGMGSGTRLFVRDSAKDRNTTLHQSLIDTVDPGDSVNLQCSIFTESCAGDHSVYWFKQSSGDSEGVLYTKGERNGRCKDSTESQTQSCVYSLHKNNISRSDSGIYYCAVASCGEILLGRGTQLNIRESGHLYPGLLALFGVLNIIFLALAVFLGFKLFRGQRKSKTEYNIFNQDSLNYAAITFRQKPLNTKRARAQITQEQSLYAQVRSLQ", "length": 326 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-5", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-5#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": "AGR" }, { "id": "HGNC:12109", "url": "https://alliancegenome.org/gene/HGNC:12109#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B2XU08-1", "protein_name": "Novel immune-type receptor 14a long isoform", "gene_name": "nitr14a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MILWAFVTVLCVARAAHSRIDQPDKVLAVELGSTVTLRCISWKENIFWYKQVAGQRPRVISAFQKLMEPIFYKEFKNERFWGIRLRSSTNLTISDIIQSDEAVYYCASRAFYIEFGSGTHLKIKGHQAAAFETSNFNKTCQQKCNKNSTTEKSNVSDERLYPAVLGLACALGLCGVRSSRQDNQIREQWNAQDPDDENVTYVAYTCDSLRKTFNLEENLSRECI", "length": 224 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-070108-3", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-070108-3#orthology", "database": "AGR" }, { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B3DKB6-1", "protein_name": "Novel immune-type receptor 2a", "gene_name": "nitr2a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MIHFLILTLTFLQCSSETTDIKNYLKIVQAGDTVNFTCSLFNEIRNSVVWIKQSVGKKPLPVVSSFQNVDHKFDNDFDKQKRFFVTKDDVSFNLSITNTEVSDSATYYCITYAYHFTFGNSTDLIVKAGELNIKSDHQRSASEDQQCSVISQSCAEEHKVYWFRQRSGESPPGVIYTQDSRSAQCEKSSDLNSTAHKCIYSLPKTDEDPAIYYCAVAACGQILFGDGKKAGLKDECFQTHWITALLIITASSMIVNIILSVQLHKYRQKDRFYNTQSHQLSVDHADGLNYAALSFQQNPSTSRKSSERNLQDTAMYAHTRRQQM", "length": 324 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": "AGR" }, { "id": "HGNC:12109", "url": "https://alliancegenome.org/gene/HGNC:12109#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-28", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-28#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B3DKF8-1", "protein_name": "Novel immune-type receptor 5", "gene_name": "nitr5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNKRLCVIIFLLCEVSETVYGNIIQPDTVVSFQEGETAVLRCFITNSQMSMTLWYKQVTGEEPRLIASSILRSSEIQFHNEFDSSHFEVLRDTGGFNLKIVNAVQSDSGTYYCATSFSNVIEFGNGTRLVVKGTNLNKPTYLQLHELEQVESAKNPLLCSVQNQLVRNEHRLYWFSHGSEESPPGFIHIYGNSSKSCVGSSKSDCLSPTCMYNLPMKRSRSSEMEMHYCALATCGQALFGNVSKLNLDAVGSPKILFIQIGLGVLLAISLAINILLCCQRKNGRKSQIQTADEDLSINPFSEVTYATVNTSSKHSRVKRESKQEDTLYSGLACQQHS", "length": 337 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": "AGR" }, { "id": "HGNC:12109", "url": "https://alliancegenome.org/gene/HGNC:12109#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-40", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-40#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1LW33-1", "protein_name": "Signal-regulatory protein beta 2", "gene_name": "Sirpb2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLLDTWANILHSALLLILLLELKGADMKELKVIQPQKSVSVYDGGSVILNCTVTSLIPVGPVKWFKGVGQNRILTYHFTGEYFPRITSVTDTNKRNNMDFSIHISNITLEDAGTFFCVKFQKGIVEPDTEIVSGGGTELFVFDMKELKVIQPDKAISVDAGGSVILNCTVTSVIPVGPIRWFRGVKHSRQLIYNFIGNNFPRVTNASDASKRNNLDFSIHISNVTPADAGTYYCVKFQKGIVEPDIEIQSGGGTELLVFELKTSGSAKIFAAALLGYKLLLLIAVTVIYRHRCKMLNRFSMEIDADEKPLKIAHKDTIRTT", "length": 322 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-020225-16", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-16#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-8", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-8#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-4", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-4#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-6", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-6#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-7", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-7#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-11", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-11#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-40", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-40#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-28", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-28#orthology", "database": "AGR" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LY66-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type substrate 1-like", "gene_name": "LOC100909964", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLLHSSAHILHSALLLILLLELKGADMKELKVIQPQKLVSVYDGGSVILNCTVTSLTPVGPTRWFKGEGQNRQLIYSFRGDYFPRITNIADVTKRNNTDFSIRISNIMLADAGTYYCVKFQKGTVEPDIEIQSGGGTELFVYGADMKKLKVVQPEKLISVDAGESVTLNCTVTSIIPMGPIKWFRGAQHSRHLIFNFTGGYFPRVTNVSDSSKRNNLDFSIRISNVMPADAGTYYCVKFQKELLETDIEIQSGGGTELLVFEPKTSGIAKILAAALLGYKLMLVIAVTLIHKHRCKIPE", "length": 300 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-020225-5", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-5#orthology", "database": "AGR" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0DPF4-1", "protein_name": "T cell receptor alpha variable 35", "gene_name": "TRAV35", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLLEHLLIILWMQLTWVSGQQLNQSPQSMFIQEGEDVSMNCTSSSIFNTWLWYKQEPGEGPVLLIALYKAGELTSNGRLTAQFGITRKDSFLNISASIPSDVGIYFCAGQ", "length": 110 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q3B7R5-1", "protein_name": "Novel immune-type receptor 6a", "gene_name": "nitr6a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MIFWFILMCWAPGAQSNHSAEIVSLQTFKLGDDVIIKCFSTKISLGNTLVWYKQKTGQIPRAITISYIQLNKVIFEDEFKDGRFSILPSEDSFHLNITAATKQDTGIYYCGTVSLNLIEFISGAHLMLQGTEYVDVNMTYGKIPAGNGTPVKNADDIFQKEWHPVLLCLIFSNVVFVVVTIIILADRCIHWRKRHRGLEMVASPSCEIRDSDVNYTAVSFASVPPARRSNNRQKAEYSEVNLKSRDYMI", "length": 249 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-42", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-42#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1B6-1", "protein_name": "T cell receptor alpha variable 8D-2", "gene_name": "Trav8d-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNRFLGISLVTLWFRVAWAKSQWGEENLQALSIQEGEDVTMNCSYKTYTTVVHWYRQDSGRGPALIILIRSNEREKRSGRLRATLDTSSQSSSLSITAAQCEDTAVYFCATD", "length": 112 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-070108-3", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-070108-3#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-16", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-16#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-5", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-5#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-8", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-8#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-4", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-4#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-6", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-6#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-7", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-7#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-11", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-11#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-42", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-42#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-40", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-40#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-28", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-28#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-070108-3", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-070108-3#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-16", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-16#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-5", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-5#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-8", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-8#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-4", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-4#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-6", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-6#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": "AGR" }, { "id": "HGNC:12109", "url": "https://alliancegenome.org/gene/HGNC:12109#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-7", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-7#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-11", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-11#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-42", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-42#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-40", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-40#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-28", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-28#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5R1H8-1", "protein_name": "T cell receptor alpha variable 8D-1", "gene_name": "Trav8d-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHSLLGLLMVSLWLQLTRVNSQLAEENLWALSVHEGESVTVNCSYKTSITALQWYRQKSGEGPAQLILIRSNEREKRNGRLRATLDTSSQSSSLSITATRCEDTAVYFCATD", "length": 112 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-070108-3", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-070108-3#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-16", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-16#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-5", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-5#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-8", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-8#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-4", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-4#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-6", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-6#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-7", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-7#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-11", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-11#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-42", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-42#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-40", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-40#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-28", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-28#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5R1I9-1", "protein_name": "T cell receptor alpha variable 2", "gene_name": "Trav2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKQVAKVTVLLILVSWSLAKTTQPPSMEAYEGQEVNVSCSHTNIATSEYIYWYRQVPHQGPQFIIQGYKDYVVNEVASLFISADRKLSTLSLPWVSLRDAAVYYCIVTD", "length": 109 }, "evidence": [ { "id": "ZFIN:ZDB-GENE-070108-3", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-070108-3#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-16", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-16#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-5", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-5#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-8", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-8#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-4", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-4#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-6", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-6#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-7", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-7#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-11", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-11#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-42", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-42#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-40", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-40#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-28", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-28#orthology", "database": "AGR" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5SNP8-1", "protein_name": "Novel immune-type receptor 12 precursor", "gene_name": "nitr12", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MIAFLLVYFLLFRTGFSGAVVQKKVLESFTAGQTVTLECLISVNLENYFSWFKQTLGEAPTCIVSLYAESSTPVFYGEFKNNHRMSVQKEKNTFVLNIKEAKPSDAGIYYCGARDYDLITFSNGLFLNYKDASTKQHHIKQFLSGPNLGTEHEPEFNPGDSVNLHCSVLTERCEENHTIYWFRHEFGDAHPGLIYKDGNTTDQCEKRSEKDVQSCIYNLPKKNLNLTDAGVYYCAVATCGEILFGNGSRINIRASSKFSWTDVKVPVLASTNILCLVIIVILLCKRAQKQQQKFSGPQSETRRNVKCKVKTASQLTVD", "length": 318 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": "AGR" }, { "id": "HGNC:12109", "url": "https://alliancegenome.org/gene/HGNC:12109#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-1", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-1#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5VTQ5-1", "protein_name": "Novel immune-ype receptor 1b, allele 2", "gene_name": "nitr1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRYYFIVLLSSTIFCSIGFDVVQEDNVKIVEAGEDVNFTCKFPELVQSINAWFKQTTDGKSLQIVSSYLNQQPSWNHNFEKTNRFIVANENGYFNLTIFKTKPLDSATYYCVISAYQTIGMGSGTRLLVGDSATDRNSTLHQSLIDTVDPGDSVNLQCSIFTESCAGDHSVYWFKQSSGDSEGVLYTKGERNGRCKNSTESQTQSCVYSLHKNNISRSDSGIYYCALAACGQILLGRGTQLNIRESDAVNPTLIALGILNVIFLVYAVFVTIELRNKVRLDICGEDILILADQNDLIAGLNVKFSEEHSFVKYSMIMQKNAYKTLQAIRSST", "length": 332 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-020225-16", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-020225-16#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": "AGR" }, { "id": "HGNC:12109", "url": "https://alliancegenome.org/gene/HGNC:12109#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5YCY8-1", "protein_name": "Novel immune-type receptor 8", "gene_name": "nitr8", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSTVLFLTFVCCIGAHIIKQPKLFQTAKLGDDVIIECYLPNKDYNHMVWYKQEIGNQLKATSKSYIYMNNVEFVGEFNNGRFNVTISPGIYHLHISSTKKQDVATYFCGTISLGQLTFGPGTFLMLEEEHGTSTVHQEPISEVHIGDNITFTCRVQREDKKKCEAGHHALWFRETAEDLESAPGIIYTAGDIKKHEERCEEDSDSQSCIYTLTKRSLSLSDAGVYYCAVHGCDKIMFGNGTRLEFSSIRDGDLTNPLFLLLISSNIISMIIIIFLVALQLSFSRSAVQETFQDTQVEHADALTYTSVSFSSKPSRGAKQNSISQNNDVYSQIRS", "length": 334 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": "AGR" }, { "id": "HGNC:12109", "url": "https://alliancegenome.org/gene/HGNC:12109#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-041001-7", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-041001-7#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8UV99-1", "protein_name": "Novel immune-type receptor 1c precursor", "gene_name": "nitr1c", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRYYFIVLLSSTIFCSTGFDVVQEDTVKIVEAGGDVNFTCIFPGHVPSTKAWFKQTTVGKYLQIVSLDLKKQLKWNSSFEKTNRFNVTKVDDYFNLTILKTKPSDSATYYCVVSAYETIGMGSATRLLVKDAATDRNTTLHQSLIETVDPGDSVNLQCSIFTESCAGDHSVYWFKQSSGHPEGVLYTKGERNGRCKNNTESQTQSCVYSLHKNNISRSDSGIYYCAVDQCGEILFGRGTQLNIREYFDFNPGLLALGISNIMFLALVVVLGIKLCRSQIKTSASQTTQDEDGLNYASITFRQKPLNTRRARAKFTQDQSLYAQVRSHQ", "length": 328 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "ZFIN:ZDB-GENE-001106-4", "url": "https://alliancegenome.org/gene/ZFIN:ZDB-GENE-001106-4#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": "AGR" }, { "id": "HGNC:12109", "url": "https://alliancegenome.org/gene/HGNC:12109#orthology", "database": "AGR" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q90Z83-1", "protein_name": "Novel immune-type receptor 4a", "gene_name": "nitr4a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNHIIYVIIFLFHPQVSGKNNCTVDQVDEVLTTQEGHIVLLPCLLLEDHFHRVIWYKQVLGEKPVVIVSSYHHSQPNEFSSDFKETQRFHAVRKADSFNLTIRRTLKSDSGTYFCGSAFANVVSFGTGTILLVKGADLKPAVIQHPVHAFIKPESNVTLRCSVEGKTCDKGVQSVYWFRQSLNTTHQGIVYTHGKSKNECADSSDTQSCLQNLAKMSVDVSEAGLYYCSVVTCDEVLFGNGTTLVIKDGFISESIQKYILIGLTVLSAVSLTINILLSLPLRRNGGKPQQMQTNDDITRVQFQNADDVNYAALNLSSKRGQRKMTLEKTPTQTNAAR", "length": 337 }, "evidence": [ { "id": "MGI:1196221", "url": "https://alliancegenome.org/gene/MGI:1196221#orthology", "database": "AGR" }, { "id": "HGNC:12108", "url": "https://alliancegenome.org/gene/HGNC:12108#orthology", "database": 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"evidence": [ { "database": "UniProtKB", "id": "A0A075B652", "url": "https://www.uniprot.org/uniprotkb/A0A075B652" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 43, "end_pos": 45, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A075B652-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 114, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A075B652-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A075B652" } ], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.agr", "label": "AGR Homologs" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 43, "end_pos": 45 } ] }, "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }