{
    "bcoid": "GLY_001454",
    "title": "Human Glycan GlycomeAtlas Citations",
    "description": "The Human Glycan GlycomeAtlas Citations dataset comprises human [TaxID: 9606] tissue glycan citation ...",
    "filename_list": "human_proteoform_citations_glycosylation_sites_glycomeatlas.csv",
    "filename": "human_proteoform_citations_glycosylation_sites_glycomeatlas.csv",
    "filetype": "csv",
    "categories": {
        "molecule": [
            "Proteoform"
        ],
        "tag": [
            "GlycomeAtlas Citations"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ],
        "species": [
            "Homo sapiens"
        ]
    },
    "minitable": {
        "content": [
            [
                "...",
                "Chapter 12 -..."
            ],
            [
                "...",
                "Chapter 12 -..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                },
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                }
            ],
            [
                "",
                "Chapter 12 - Mouse and Human Glycomes",
                "Academic Press",
                "2010",
                "Simon J. North, Sara Chalabi, Mark Sutton-Smith, Anne Dell, Stuart M. Haslam",
                "glycan_xref_doi",
                "10.1016/B978-0-12-373600-0.00012-3",
                "glycan_xref_glycomeatlas",
                "G00318AV",
                "G00318AV"
            ],
            [
                "",
                "Chapter 12 - Mouse and Human Glycomes",
                "Academic Press",
                "2010",
                "Simon J. North, Sara Chalabi, Mark Sutton-Smith, Anne Dell, Stuart M. Haslam",
                "glycan_xref_doi",
                "10.1016/B978-0-12-373600-0.00012-3",
                "glycan_xref_glycomeatlas",
                "G00998NI",
                "G00998NI"
            ]
        ]
    },
    "readme": "Name\n   - Human Glycan GlycomeAtlas Citations\n\nVersion\n   - v-2.10.1\n\nCreated on\n  - 2023-03-14T20:00:08.127Z\n\nModified on\n   - 2025-03-04T15:53:49.509Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Human Glycan GlycomeAtlas Citations dataset comprises human [TaxID: 9606] tissue glycan citation information for Homo sapiens. This data is provided by the GlycomeAtlas from GlyCosmos which provides comprehensive information on glycan structures catalogued from various publications. More information can be found here: https://glycosmos.org/glycomeatlas.\n\nDescription Domain\n   Keywords\n   - GlycomeAtlas\n   - glycan\n   - proteoform\n\n   Pipeline Steps\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: all_blacklisted_pmids.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/compiled/all_blacklisted_pmids.csv\n      Name: doi_citations.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/compiled/doi_citations.csv\n      Name: human_proteoform_glycosylation_sites_glycomeatlas.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/reviewed/human_proteoform_glycosylation_sites_glycomeatlas.csv\n   Output Subdomain\n      Name: human_proteoform_citations_glycosylation_sites_glycomeatlas.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/reviewed/human_proteoform_citations_glycosylation_sites_glycomeatlas.csv\n      Name: human_proteoform_citations_glycosylation_sites_glycomeatlas.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/reviewed/human_proteoform_citations_glycosylation_sites_glycomeatlas.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"1\"\n      Name: \"title\"\n     Description: \"Title of the published article in the journal\"\n      Unique Values: \"1\"\n      Name: \"journal_name\"\n     Description: \"The name of the journal in which the article is published\"\n      Unique Values: \"1\"\n      Name: \"publication_date\"\n     Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n      Unique Values: \"1\"\n      Name: \"authors\"\n     Description: \"NA\"\n      Unique Values: \"1\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"1\"\n      Name: \"src_xref_key\"\n     Description: \"Source Xref  key\"\n      Unique Values: \"1\"\n      Name: \"src_xref_id\"\n     Description: \"Source X-ref ID\"\n      Unique Values: \"185\"\n      Name: \"glytoucan_ac\"\n     Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n      Unique Values: \"185\"",
    "downloadurl": "/ln2data/releases/data/v-2.10.1/reviewed/human_proteoform_citations_glycosylation_sites_glycomeatlas.csv"
}