{
    "bcoid": "GLY_000684",
    "title": "Fruitfly Glycosyltransferases",
    "description": "The Fruitfly Glycosyltransferases dataset contains a list of fruitfly [taxid:7227] Glycosyltransferases ...",
    "filename_list": "fruitfly_protein_glycosyltransferase.csv",
    "filename": "fruitfly_protein_glycosyltransferase.csv",
    "filetype": "csv",
    "categories": {
        "species": [
            "Drosophila melanogaster"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "Glycosyltransferases"
        ],
        "file_type": [
            "csv"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "minitable": {
        "content": [
            [
                "O01346-1...",
                "Drosophila m..."
            ],
            [
                "Q09332-1...",
                "Drosophila m..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "species..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "species"
                },
                {
                    "type": "string",
                    "label": "status"
                },
                {
                    "type": "string",
                    "label": "gene_symbol"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_protein_name"
                },
                {
                    "type": "string",
                    "label": "ec_number"
                },
                {
                    "type": "string",
                    "label": "brenda_ec_number"
                },
                {
                    "type": "string",
                    "label": "cazy_gt_family"
                },
                {
                    "type": "string",
                    "label": "interpro_id"
                },
                {
                    "type": "string",
                    "label": "pfam_ac"
                },
                {
                    "type": "string",
                    "label": "go_molecular_function"
                }
            ],
            [
                "O01346-1",
                "Drosophila melanogaster (Fruit fly)",
                "reviewed",
                "egh",
                "Beta-1,4-mannosyltransferase egh, EC 2.4.1.- (Protein egghead) (Protein zeste-white 4)",
                "2.4.1.-",
                "",
                "GT2",
                "IPR027389|IPR001173|IPR029044",
                "PF13632",
                "beta-1,4-mannosyltransferase activity [GO:0019187]"
            ],
            [
                "Q09332-1",
                "Drosophila melanogaster (Fruit fly)",
                "reviewed",
                "Uggt",
                "UDP-glucose:glycoprotein glucosyltransferase, UGT, dUGT, EC 2.4.1.- (UDP--Glc:glycoprotein glucosyltransferase)",
                "2.4.1.-",
                "",
                "GT24",
                "IPR040497|IPR029044|IPR009448|IPR040693|IPR040694|IPR040692|IPR040525",
                "PF18404|PF18400|PF18401|PF18402|PF18403|PF06427",
                "UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]|unfolded protein binding [GO:0051082]"
            ]
        ]
    },
    "readme": "Name\n   - Fruitfly Glycosyltransferases\n\nVersion\n   - v-2.10.1\n\nCreated on\n  - 2022-09-06T11:20:50.205601\n\nModified on\n   - 2024-05-17T11:24:09.252Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Jeet Vora [jeetvora@gwu.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The Fruitfly Glycosyltransferases dataset contains a list of fruitfly [taxid:7227] Glycosyltransferases derived from UniProtKB database using advanced search and other databases including CAZy, InterPro and Pfam.If you use this dataset please provide proper attribution to UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - GT\n   - gycosyltransferase\n   - CAZy\n\n   Pipeline Steps\n   - Step-1: The script maps and replaces the UniProtKB accession to the UniProtKB canonical accession\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: fruitfly_protein_glycosyltransferase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/compiled/fruitfly_protein_glycosyltransferase.csv\n      Name: fruitfly_protein_masterlist.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/reviewed/fruitfly_protein_masterlist.csv\n   Output Subdomain\n      Name: fruitfly_protein_glycosyltransferase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/reviewed/fruitfly_protein_glycosyltransferase.csv\n      Name: fruitfly_protein_glycosyltransferase.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/reviewed/fruitfly_protein_glycosyltransferase.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"123\"\n      Name: \"species\"\n     Description: \"Species of the protein.\"\n      Unique Values: \"1\"\n      Name: \"status\"\n     Description: \"Status of the protein record in UniProtKB database that can be reviewed for UniProtKB/Swiss-Prot entry or unreviewed for UniProtKB/TrEMBL entry\"\n      Unique Values: \"2\"\n      Name: \"gene_symbol\"\n     Description: \"\"Official gene name/symbol assigned to the gene. Human gene names/symbols are approved by the HUGO Gene Nomenclature Committee (HGNC)\"\n      Unique Values: \"126\"\n      Name: \"uniprotkb_protein_name\"\n     Description: \"Name of the protein in UniProtKB database\"\n      Unique Values: \"94\"\n      Name: \"ec_number\"\n     Description: \"Enzyme Commision number assigned to an enzyme by Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (IUBMB)\"\n      Unique Values: \"35\"\n      Name: \"brenda_ec_number\"\n     Description: \"Enzyme Commission (EC) number assigned to enzyme in BRENDA database\"\n      Unique Values: \"11\"\n      Name: \"cazy_gt_family\"\n     Description: \"The Family assigned to glycosyltransferase in the CAZy (Carbohydrate-Active enZYmes) database\"\n      Unique Values: \"34\"\n      Name: \"interpro_id\"\n     Description: \"InterPro Identifier\"\n      Unique Values: \"53\"\n      Name: \"pfam_ac\"\n     Description: \"Accession assigned to the protein family in the Pfam database\"\n      Unique Values: \"40\"\n      Name: \"go_molecular_function\"\n     Description: \"\"The elemental activities of a gene product at the molecular level\"\n      Unique Values: \"64\"",
    "downloadurl": "/ln2data/releases/data/v-2.10.1/reviewed/fruitfly_protein_glycosyltransferase.csv"
}