{
    "bcoid": "GLY_000003",
    "title": "Human EBI-UniProtKB NT file",
    "description": "The Human EBI-UniProtKB NT file contains proteome data for Homo sapiens [taxid:9606] from UniProtKB and ...",
    "filename_list": "human_protein_ntdata.nt",
    "filename": "human_protein_ntdata.nt",
    "filetype": "nt",
    "categories": {
        "species": [
            "Homo sapiens"
        ],
        "molecule": [
            "Protein"
        ],
        "tag": [
            "EMBL-EBI-GlyGen-NT File"
        ],
        "file_type": [
            "nt"
        ],
        "status": [
            "Reviewed"
        ],
        "scope": [
            "internal"
        ]
    },
    "iconfilename": "nt_icon_all.png",
    "sampledata": {
        "type": "text",
        "data": "<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.uniprot.org/core/Protein> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/version> \"73\"^^<http://www.w3.org/2001/XMLSchema#integer> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/created> \"2014-10-29\"^^<http://www.w3.org/2001/XMLSchema#date> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/modified> \"2025-06-18\"^^<http://www.w3.org/2001/XMLSchema#date> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/mnemonic> \"A0A087WZT3_HUMAN\" .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/reviewed> \"false\"^^<http://www.w3.org/2001/XMLSchema#boolean> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/existence> <http://purl.uniprot.org/core/Evidence_at_Protein_Level_Existence> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/organism> <http://purl.uniprot.org/taxonomy/9606> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/submittedName> <http://purl.uniprot.org/uniprot/A0A087WZT3#SIP9649D5E3356A137A> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/encodedBy> <http://purl.uniprot.org/uniprot/A0A087WZT3#gene-MD5A7613AFB9595CF8A6EA7448E73E7BF68> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/sequence> <http://purl.uniprot.org/isoforms/A0A087WZT3-1> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1185> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/10173507-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-14493093> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/514538-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/517623-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-12809220> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/946029-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/10972887-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/723153-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/374781-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/1052734-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/1387094-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/8638439-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-17178971> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-12516603> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-16439278> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-12013470> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/741158-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/10218066-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/3918154-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-17240818> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/712550-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/517127-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/11419867-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-12272076> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/10269136-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/745520-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/4395669-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/4395732-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/7254550-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/10251462-12006120> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/embl/AC133555#not-annotated-cds-A0A087WZT3> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/alphafolddb/A0A087WZT3> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/intact/A0A087WZT3> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/massive/A0A087WZT3> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/antibodypedia/68804> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/dnasu/552900> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/ucsc/uc059ssp.1> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/agr/HGNC:53563> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://identifiers.org/ncbigene/552900> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/genecards/BOLA2-SMG1P6> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/hgnc/53563> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/veupathdb/HostDB:ENSG00000169627> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/veupathdb/HostDB:ENSG00000183336> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/hogenom/CLU_121739_0_0_1> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/biogrid-orcs/552900> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/biogrid-orcs/654483> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/chitars/BOLA2B> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/bgee/ENSG00000169627> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/expressionatlas/A0A087WZT3> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/citation> <http://purl.uniprot.org/citations/21269460> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/citation> <http://purl.uniprot.org/citations/15616553> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/citation> <http://purl.uniprot.org/citations/11237011> .\n<http://purl.uniprot.org/uniprot/A0A087WZT3> <http://purl.uniprot.org/core/citation> <http://purl.uniprot.org/citations/15496913> .\n<http://purl.uniprot.org/taxonomy/9606> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.uniprot.org/core/Taxon> .\n<http://purl.uniprot.org/taxonomy/9606> <http://purl.uniprot.org/core/scientificName> \"Homo sapiens\" .\n<http://purl.uniprot.org/taxonomy/9606> <http://purl.uniprot.org/core/commonName> \"Human\" .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.uniprot.org/core/Protein> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/version> \"147\"^^<http://www.w3.org/2001/XMLSchema#integer> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/created> \"2007-02-06\"^^<http://www.w3.org/2001/XMLSchema#date> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/modified> \"2025-06-18\"^^<http://www.w3.org/2001/XMLSchema#date> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/mnemonic> \"ANR55_HUMAN\" .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/reviewed> \"true\"^^<http://www.w3.org/2001/XMLSchema#boolean> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/existence> <http://purl.uniprot.org/core/Evidence_at_Protein_Level_Existence> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/organism> <http://purl.uniprot.org/taxonomy/9606> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/recommendedName> <http://purl.uniprot.org/uniprot/Q3KP44#SIPBF862DFB0987164F> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/encodedBy> <http://purl.uniprot.org/uniprot/Q3KP44#gene-MD53B4AF2C7B5EAAEC622D074531FE2D291> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/isolatedFrom> <http://purl.uniprot.org/tissues/292> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/isolatedFrom> <http://purl.uniprot.org/tissues/229> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/isolatedFrom> <http://purl.uniprot.org/tissues/180> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/sequence> <http://purl.uniprot.org/isoforms/Q3KP44-1> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/sequence> <http://purl.uniprot.org/isoforms/D6R9N4-1> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/sequence> <http://purl.uniprot.org/isoforms/D6RBD3-1> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/sequence> <http://purl.uniprot.org/isoforms/Q3KP44-3> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/sequence> <http://purl.uniprot.org/isoforms/Q3KP44-2> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1185> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/597> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/677> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/25> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/40> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/12006120-14493093> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/740220-14493093> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/725515-14493093> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/713635-14493093> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/7116203-14493093> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/725145-14493093> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/10192241-14493093> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/740098-14493093> .\n<http://purl.uniprot.org/uniprot/Q3KP44> <http://purl.uniprot.org/core/interaction> <http://purl.uniprot.org/intact/1383632-14493093> .\n"
    },
    "readme": "Name\n   - Human EBI-UniProtKB NT file\n\nVersion\n   - v-2.10.1\n\nCreated on\n  - 2019-01-23T17:21:05.869598\n\nModified on\n   - 2024-05-17T11:23:49.279Z\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Luke Johnson [luke.johnson@email.gwu.edu], Urnisha Bhuiyan [sbhuiyan28@email.gwu.edu], Cyrus Au-Yeung [cyruschauyeung@gwu.edu], Kate Warner [k.warner1@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Human EBI-UniProtKB NT file contains proteome data for Homo sapiens [taxid:9606] from UniProtKB and other EMBL-EBI resources as per the GlyGen specifications in the NT format. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - NT\n   - proteome\n   - EMBL-EBI\n\n   Pipeline Steps\n   - Step-0: The NT file requires no processing after it is recieved from EMBL-EBI-UniProtKB\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-homo-sapiens.nt\n      URI: https:/data.glygen.org/ln2downloads/ebi/2025_10_01/uniprot-proteome-homo-sapiens.nt\n   Output Subdomain\n      Name: human_protein_ntdata.nt\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/reviewed/human_protein_ntdata.nt\n      Name: human_protein_ntdata.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.10.1/reviewed/human_protein_ntdata.stat.csv\n\nFields\n      Name: \"triple\"\n     Description: \"RDF triple\"\n      Unique Values: \"30806231\"",
    "downloadurl": "/ln2data/releases/data/v-2.10.1/reviewed/human_protein_ntdata.nt"
}
