{ "bcoid": "GLY_000677", "title": "Fruitfly Proteoform Glycosylation Citations (UniProtKB)", "description": "", "filename": "fruitfly_proteoform_citations_glycosylation_sites_uniprotkb.csv", "filetype": "csv", "categories": { "species": [ "Drosophila melanogaster" ], "molecule": [ "Proteoform" ], "tags": [ "Protein Citations UniProtKB" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "P08953-1...", "Structure of..." ], [ "P12024-1...", "Insight into..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "glytoucan_ac" } ], [ "P08953-1", "Structure of the Toll-Spatzle complex, a molecular hub in Drosophila development and innate immunity.", "Proceedings of the National Academy of Sciences of the United States of America", "2014 Apr 29", "Parthier C, Stelter M, Ursel C, Fandrich U, Lilie H, Breithaupt C, Stubbs MT", "protein_xref_pubmed", "24733933", "protein_xref_uniprotkb_gly", "P08953", "" ], [ "P12024-1", "Insight into the regulation of glycan synthesis in Drosophila chaoptin based on mass spectrometry.", "PloS one", "2009", "Kanie Y, Yamamoto-Hino M, Karino Y, Yokozawa H, Nishihara S, Ueda R, Goto S, Kanie O", "protein_xref_pubmed", "19415110", "protein_xref_uniprotkb_gly", "P12024", "" ], [ "Q9VB68-1", "Structure-function analysis of grass clip serine protease involved in Drosophila Toll pathway activation.", "The Journal of biological chemistry", "2011 Apr 8", "Kellenberger C, Leone P, Coquet L, Jouenne T, Reichhart JM, Roussel A", "protein_xref_pubmed", "21310954", "protein_xref_uniprotkb_gly", "Q9VB68", "" ], [ "P07207-1", "Mapping Sites of O-Glycosylation and Fringe Elongation on Drosophila Notch.", "The Journal of biological chemistry", "2016 Jul 29", "Harvey BM, Rana NA, Moss H, Leonardi J, Jafar-Nejad H, Haltiwanger RS", "protein_xref_pubmed", "27268051", "protein_xref_uniprotkb_gly", "P07207", "" ], [ "P08510-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P08510", "" ], [ "P10379-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P10379", "" ], [ "P10379-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P10379", "" ], [ "P07140-1", "Post-translational modifications of Drosophila acetylcholinesterase. In vitro mutagenesis and expression in Xenopus oocytes.", "The Journal of biological chemistry", "1992 Jan 25", "Mutero A, Fournier D", "protein_xref_pubmed", "1730712", "protein_xref_uniprotkb_gly", "P07140", "" ], [ "P06002-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P06002", "" ], [ "P12024-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P12024", "" ], [ "Q9VGG5-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9VGG5", "" ], [ "A1Z7G7-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "A1Z7G7", "" ], [ "P82295-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P82295", "" ], [ "P08171-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P08171", "" ], [ "Q27367-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q27367", "" ], [ "P08953-1", "Functional insights from the crystal structure of the N-terminal domain of the prototypical toll receptor.", "Structure (London, England : 1993)", "2013 Jan 8", "Gangloff M, Arnot CJ, Lewis M, Gay NJ", "protein_xref_pubmed", "23245851", "protein_xref_uniprotkb_gly", "P08953", "" ], [ "P08953-1", "Cytokine Spatzle binds to the Drosophila immunoreceptor Toll with a neurotrophin-like specificity and couples receptor activation.", "Proceedings of the National Academy of Sciences of the United States of America", "2013 Dec 17", "Lewis M, Arnot CJ, Beeston H, McCoy A, Ashcroft AE, Gay NJ, Gangloff M", "protein_xref_pubmed", "24282309", "protein_xref_uniprotkb_gly", "P08953", "" ], [ "P08953-1", "Liesegang-like patterns of Toll crystals grown in gel.", "Journal of applied crystallography", "2013 Apr 1", "Gangloff M, Moreno A, Gay NJ", "protein_xref_pubmed", "23596340", "protein_xref_uniprotkb_gly", "P08953", "" ], [ "P42787-1", "Structure-function analysis of the short splicing variant carboxypeptidase encoded by Drosophila melanogaster silver.", "Journal of molecular biology", "2010 Aug 20", "Tanco S, Arolas JL, Guevara T, Lorenzo J, Aviles FX, Gomis-Ruth FX", "protein_xref_pubmed", "20600119", "protein_xref_uniprotkb_gly", "P42787", "" ], [ "Q9VR07-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9VR07", "" ], [ "Q00748-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q00748", "" ], [ "Q95RU0-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q95RU0", "" ], [ "P09208-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P09208", "" ], [ "O97148-1", "Crystal structure of the ectodomain of Methuselah, a Drosophila G protein-coupled receptor associated with extended lifespan.", "Proceedings of the National Academy of Sciences of the United States of America", "2001 Mar 27", "West AP Jr, Llamas LL, Snow PM, Benzer S, Bjorkman PJ", "protein_xref_pubmed", "11274391", "protein_xref_uniprotkb_gly", "O97148", "" ], [ "P10674-1", "Novel fold revealed by the structure of a FAS1 domain pair from the insect cell adhesion molecule fasciclin I.", "Structure (London, England : 1993)", "2003 Feb", "Clout NJ, Tisi D, Hohenester E", "protein_xref_pubmed", "12575939", "protein_xref_uniprotkb_gly", "P10674", "" ], [ "Q10714-1", "Drosophila melanogaster angiotensin I-converting enzyme expressed in Pichia pastoris resembles the C domain of the mammalian homologue and does not require glycosylation for secretion and enzymic activity.", "The Biochemical journal", "1996 Aug 15", "Williams TA, Michaud A, Houard X, Chauvet MT, Soubrier F, Corvol P", "protein_xref_pubmed", "8761461", "protein_xref_uniprotkb_gly", "Q10714", "" ], [ "Q9VNJ5-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9VNJ5", "" ], [ "P20241-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P20241", "" ], [ "P20241-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P20241", "" ], [ "Q9VN14-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q9VN14", "" ], [ "Q09101-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q09101", "" ], [ "Q0KHY3-3", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q0KHY3", "" ], [ "P20241-1", "Crystal structure of tandem type III fibronectin domains from Drosophila neuroglian at 2.0 A.", "Neuron", "1994 Apr", "Huber AH, Wang YM, Bieber AJ, Bjorkman PJ", "protein_xref_pubmed", "7512815", "protein_xref_uniprotkb_gly", "P20241", "" ], [ "Q9V3D4-1", "Crystal structure of imaginal disc growth factor-2. A member of a new family of growth-promoting glycoproteins from Drosophila melanogaster.", "The Journal of biological chemistry", "2002 Apr 12", "Varela PF, Llera AS, Mariuzza RA, Tormo J", "protein_xref_pubmed", "11821393", "protein_xref_uniprotkb_gly", "Q9V3D4", "" ], [ "Q24247-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q24247", "" ], [ "Q24046-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q24046", "" ], [ "Q00174-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q00174", "" ], [ "Q9NFP1-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9NFP1", "" ], [ "Q7K0P4-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q7K0P4", "" ], [ "Q868Z9-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q868Z9", "" ], [ "Q94887-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q94887", "" ], [ "P91685-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P91685", "" ], [ "P36193-1", "A novel inducible antibacterial peptide of Drosophila carries an O-glycosylated substitution.", "The Journal of biological chemistry", "1993 Jul 15", "Bulet P, Dimarcq JL, Hetru C, Lagueux M, Charlet M, Hegy G, Van Dorsselaer A, Hoffmann JA", "protein_xref_pubmed", "8325867", "protein_xref_uniprotkb_gly", "P36193", "" ], [ "P36193-1", "Differential display of peptides induced during the immune response of Drosophila: a matrix-assisted laser desorption ionization time-of-flight mass spectrometry study.", "Proceedings of the National Academy of Sciences of the United States of America", "1998 Sep 15", "Uttenweiler-Joseph S, Moniatte M, Lagueux M, Van Dorsselaer A, Hoffmann JA, Bulet P", "protein_xref_pubmed", "9736738", "protein_xref_uniprotkb_gly", "P36193", "" ], [ "P36193-1", "Conformational studies by NMR of the antimicrobial peptide, drosocin, and its non-glycosylated derivative: effects of glycosylation on solution conformation.", "Biochemistry", "1999 Jan 12", "McManus AM, Otvos L Jr, Hoffmann R, Craik DJ", "protein_xref_pubmed", "9888811", "protein_xref_uniprotkb_gly", "P36193", "" ], [ "Q24114-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q24114", "" ], [ "Q9W568-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q9W568", "" ], [ "Q9V498-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9V498", "" ], [ "Q8MRC9-1", "A molecular switch orchestrates enzyme specificity and secretory granule morphology.", "Nature communications", "2018 Aug 29", "Ji S, Samara NL, Revoredo L, Zhang L, Tran DT, Muirhead K, Tabak LA, Ten Hagen KG", "protein_xref_pubmed", "30158631", "protein_xref_uniprotkb_gly", "Q8MRC9", "" ], [ "P11584-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P11584", "" ], [ "Q24418-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q24418", "" ], [ "Q9W2M2-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9W2M2", "" ], [ "Q24048-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q24048", "" ], [ "Q8MM24-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q8MM24", "" ], [ "Q9VN14-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9VN14", "" ], [ "Q9V496-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9V496", "" ], [ "P10674-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P10674", "" ], [ "P10674-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P10674", "" ], [ "Q95NH6-1", "Primary structure and in vitro antibacterial properties of the Drosophila melanogaster attacin C Pro-domain.", "The Journal of biological chemistry", "2004 Apr 9", "Rabel D, Charlet M, Ehret-Sabatier L, Cavicchioli L, Cudic M, Otvos L Jr, Bulet P", "protein_xref_pubmed", "14744858", "protein_xref_uniprotkb_gly", "Q95NH6", "" ], [ "Q24323-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q24323", "" ], [ "P11046-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P11046", "" ], [ "P09615-1", "Drosophila segment polarity gene product porcupine stimulates the posttranslational N-glycosylation of wingless in the endoplasmic reticulum.", "The Journal of biological chemistry", "2002 Apr 12", "Tanaka K, Kitagawa Y, Kadowaki T", "protein_xref_pubmed", "11821428", "protein_xref_uniprotkb_gly", "P09615", "" ], [ "P11584-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P11584", "" ], [ "Q7K4Y6-1", "Neurotransmitter and psychostimulant recognition by the dopamine transporter.", "Nature", "2015 May 21", "Wang KH, Penmatsa A, Gouaux E", "protein_xref_pubmed", "25970245", "protein_xref_uniprotkb_gly", "Q7K4Y6", "" ], [ "Q9VM64-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q9VM64", "" ], [ "Q24247-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q24247", "" ], [ "Q9VEX0-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9VEX0", "" ], [ "Q6AWJ9-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q6AWJ9", "" ], [ "O61307-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "O61307", "" ], [ "P42787-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P42787", "" ], [ "P40689-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P40689", "" ], [ "Q9VW12-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9VW12", "" ], [ "P16620-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P16620", "" ], [ "A0A1F4-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "A0A1F4", "" ], [ "Q9GNK5-1", "Structure of tracheal cytotoxin in complex with a heterodimeric pattern-recognition receptor.", "Science (New York, N.Y.)", "2006 Mar 24", "Chang CI, Chelliah Y, Borek D, Mengin-Lecreulx D, Deisenhofer J", "protein_xref_pubmed", "16556841", "protein_xref_uniprotkb_gly", "Q9GNK5", "" ], [ "Q95T64-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q95T64", "" ], [ "P15425-1", "The cyclophilin homolog ninaA is a tissue-specific integral membrane protein required for the proper synthesis of a subset of Drosophila rhodopsins.", "Cell", "1991 Apr 19", "Stamnes MA, Shieh BH, Chuman L, Harris GL, Zuker CS", "protein_xref_pubmed", "1707759", "protein_xref_uniprotkb_gly", "P15425", "" ], [ "P34082-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P34082", "" ], [ "P11147-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "P11147", "" ], [ "Q9VCA2-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q9VCA2", "" ], [ "Q9W568-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "Q9W568", "" ], [ "Q9VRQ9-1", "Structure of glutaminyl cyclase from Drosophila melanogaster in space group I4.", "Acta crystallographica. Section F, Structural biology and crystallization communications", "2013-04-01", "Kolenko Petr, Koch Birgit, Rahfeld Jens Ulrich, Schilling Stephan, Demuth Hans Ulrich, Stubbs Milton T", "protein_xref_pubmed", "23545638", "protein_xref_uniprotkb_gly", "Q9VRQ9", "" ], [ "Q9VRQ9-1", "Crystal structures of glutaminyl cyclases (QCs) from Drosophila melanogaster reveal active site conservation between insect and mammalian QCs.", "Biochemistry", "2012-09-18", "Koch Birgit, Kolenko Petr, Buchholz Mirko, Carrillo David Ruiz, Parthier Christoph, Wermann Michael, Rahfeld Jens-Ulrich, Reuter Gunter, Schilling Stephan, Stubbs Milton T, Demuth Hans-Ulrich", "protein_xref_pubmed", "22897232", "protein_xref_uniprotkb_gly", "Q9VRQ9", "" ], [ "O97394-1", "Identification of N-glycosylated proteins from the central nervous system of Drosophila melanogaster.", "Glycobiology", "2007 Dec", "Koles K, Lim JM, Aoki K, Porterfield M, Tiemeyer M, Wells L, Panin V", "protein_xref_pubmed", "17893096", "protein_xref_uniprotkb_gly", "O97394", "" ] ] }, "readme": "Name\n - Fruitfly Proteoform Glycosylation Citations (UniProtKB)\n\nVersion\n - v-2.1.1\n\nCreated on\n - 2022-09-02T10:55:15.390409\n\nModified on\n - 2023-03-14T17:11:16.449Z\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nDescription Domain\n Keywords\n - publications\n - PMID\n - journal\n - citations\n - authors\n - UniProtKB\n - PubMed\n - Glycosylation\n\n Pipeline Steps\n - Step-1: The script extracts the PMID from the dataset and uses the Entrez API to retrieve the publication details and extracts in a csv dataset. \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: fruitfly_proteoform_glycosylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/fruitfly_proteoform_glycosylation_sites_uniprotkb.csv\n Output Subdomain\n Name: fruitfly_proteoform_citations_glycosylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/fruitfly_proteoform_citations_glycosylation_sites_uniprotkb.csv\n Name: fruitfly_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/fruitfly_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"74\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"30\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"18\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"29\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"30\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"30\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"74\"\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.1.1/reviewed/fruitfly_proteoform_citations_glycosylation_sites_uniprotkb.csv" }