{ "bcoid": "GLY_000676", "title": "Fruitfly Proteoform O-GlcNAc Glycosylation Citations (MCW)", "description": "The Fruitfly O-GlcNAc Glycosylation Citations (MCW) dataset contains details of the publication present ...", "filename": "fruitfly_proteoform_citations_glycosylation_sites_oglcnac_mcw.csv", "filetype": "csv", "categories": { "species": [ "Drosophila melanogaster" ], "molecule": [ "Proteoform" ], "tags": [ "Protein Citations O-GlcNAc (MCW)" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "A0A0B4K6G3-1...", "Drosophila O..." ], [ "A0A0B4K765-1...", "Drosophila O..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "glytoucan_ac" } ], [ "A0A0B4K6G3-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A0A0B4K6G3", "G49108TO" ], [ "A0A0B4K765-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A0A0B4K765", "G49108TO" ], [ "A0A0B4K7J3-1", "O-GlcNAcylation Dampens Dpp/BMP Signaling to Ensure Proper Drosophila Embryonic Development.", "Developmental cell", "2020 May 4", "Moulton MJ, Humphreys GB, Kim A, Letsou A", "protein_xref_pubmed", "32369743", "protein_xref_oglcnac_db", "A0A0B4K7J3", "G49108TO" ], [ "A0A0B4K7V4-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A0A0B4K7V4", "G49108TO" ], [ "A0A0B4KF25-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A0A0B4KF25", "G49108TO" ], [ "A0A0B4KH28-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A0A0B4KH28", "G49108TO" ], [ "A0A0B4KHL4-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A0A0B4KHL4", "G49108TO" ], [ "A0A0B4KI34-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A0A0B4KI34", "G49108TO" ], [ "A0A6H2EG35-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A0A6H2EG35", "G49108TO" ], [ "A1Z6H7-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A1Z6H7", "G49108TO" ], [ "A1Z6M0-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A1Z6M0", "G49108TO" ], [ "A1Z6P3-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "A1Z6P3", "G49108TO" ], [ "A1Z7F1-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A1Z7F1", "G49108TO" ], [ "A1Z7Y7-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A1Z7Y7", "G49108TO" ], [ "A1Z877-1", "A mutant O-GlcNAcase enriches Drosophila developmental regulators.", "Nature chemical biology", "2017 Aug", "Selvan N, Williamson R, Mariappa D, Campbell DG, Gourlay R, Ferenbach AT, Aristotelous T, Hopkins-Navratilova I, Trost M, van Aalten DMF", "protein_xref_pubmed", "28604694", "protein_xref_oglcnac_db", "A1Z877", "G49108TO" ], [ "A1Z8Z3-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A1Z8Z3", "G49108TO" ], [ "A1Z9J3-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A1Z9J3", "G49108TO" ], [ "A1ZA47-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A1ZA47", "G49108TO" ], [ "A8DQW8-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A8DQW8", "G49108TO" ], [ "A8DYL3-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A8DYL3", "G49108TO" ], [ "A8DZ29-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A8DZ29", "G49108TO" ], [ "A8JNK1-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A8JNK1", "G49108TO" ], [ "A8JUV0-4", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A8JUV0", "G49108TO" ], [ "A8JUZ7-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "A8JUZ7", "G49108TO" ], [ "B7YZK8-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "B7YZK8", "G49108TO" ], [ "B7Z002-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "B7Z002", "G49108TO" ], [ "B7Z0D3-1", "A mutant O-GlcNAcase enriches Drosophila developmental regulators.", "Nature chemical biology", "2017 Aug", "Selvan N, Williamson R, Mariappa D, Campbell DG, Gourlay R, Ferenbach AT, Aristotelous T, Hopkins-Navratilova I, Trost M, van Aalten DMF", "protein_xref_pubmed", "28604694", "protein_xref_oglcnac_db", "B7Z0D3", "G49108TO" ], [ "B7Z0D3-1", "Enrichment of O-GlcNAc modified proteins by the periodate oxidation-hydrazide resin capture approach.", "Journal of proteome research", "2010 May 7", "Klement E, Lipinszki Z, Kupihar Z, Udvardy A, Medzihradszky KF", "protein_xref_pubmed", "20146544", "protein_xref_oglcnac_db", "B7Z0D3", "G49108TO" ], [ "E1JHA6-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "E1JHA6", "G49108TO" ], [ "E1JI40-1", "A mutant O-GlcNAcase enriches Drosophila developmental regulators.", "Nature chemical biology", "2017 Aug", "Selvan N, Williamson R, Mariappa D, Campbell DG, Gourlay R, Ferenbach AT, Aristotelous T, Hopkins-Navratilova I, Trost M, van Aalten DMF", "protein_xref_pubmed", "28604694", "protein_xref_oglcnac_db", "E1JI40", "G49108TO" ], [ "E1JIL1-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "E1JIL1", "G49108TO" ], [ "E1JJE6-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "E1JJE6", "G49108TO" ], [ "E2QCS7-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "E2QCS7", "G49108TO" ], [ "F0JAP7-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "F0JAP7", "G49108TO" ], [ "H9XVM9-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "H9XVM9", "G49108TO" ], [ "M9MRD1-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9MRD1", "G49108TO" ], [ "M9MRJ1-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9MRJ1", "G49108TO" ], [ "M9MRN7-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9MRN7", "G49108TO" ], [ "M9MS77-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9MS77", "G49108TO" ], [ "M9MSL3-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "M9MSL3", "G49108TO" ], [ "M9NE05-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9NE05", "G49108TO" ], [ "M9NFP8-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9NFP8", "G49108TO" ], [ "M9PB30-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9PB30", "G49108TO" ], [ "M9PB30-1", "O-linked-N-acetylglucosamine on extracellular protein domains mediates epithelial cell-matrix interactions.", "Nature communications", "2011 Dec 13", "Sakaidani Y, Nomura T, Matsuura A, Ito M, Suzuki E, Murakami K, Nadano D, Matsuda T, Furukawa K, Okajima T", "protein_xref_pubmed", "22158438", "protein_xref_oglcnac_db", "M9PB30", "G49108TO" ], [ "M9PB30-1", "The EGF repeat-specific O-GlcNAc-transferase Eogt interacts with notch signaling and pyrimidine metabolism pathways in Drosophila.", "PloS one", "2013", "Muller R, Jenny A, Stanley P", "protein_xref_pubmed", "23671640", "protein_xref_oglcnac_db", "M9PB30", "G49108TO" ], [ "M9PBN2-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9PBN2", "G49108TO" ], [ "M9PDW8-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9PDW8", "G49108TO" ], [ "M9PF00-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9PF00", "G49108TO" ], [ "M9PF56-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "M9PF56", "G49108TO" ], [ "M9PF61-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "M9PF61", "G49108TO" ], [ "M9PHT1-1", "A mutant O-GlcNAcase enriches Drosophila developmental regulators.", "Nature chemical biology", "2017 Aug", "Selvan N, Williamson R, Mariappa D, Campbell DG, Gourlay R, Ferenbach AT, Aristotelous T, Hopkins-Navratilova I, Trost M, van Aalten DMF", "protein_xref_pubmed", "28604694", "protein_xref_oglcnac_db", "M9PHT1", "G49108TO" ], [ "O46036-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "O46036", "G49108TO" ], [ "O61735-1", "An overview of the basic helix-loop-helix proteins.", "Genome biology", "2004", "Jones S", "protein_xref_pubmed", "15186484", "protein_xref_oglcnac_db", "O61735", "G49108TO" ], [ "O62619-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "O62619", "G49108TO" ], [ "O76511-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "O76511", "G49108TO" ], [ "O96827-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "O96827", "G49108TO" ], [ "O97477-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "O97477", "G49108TO" ], [ "P02828-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "P02828", "G49108TO" ], [ "P04052-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "P04052", "G49108TO" ], [ "P04412-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "P04412", "G49108TO" ], [ "P06002-1", "Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.", "Cells", "2021 Apr 27", "Akan I, Halim A, Vakhrushev SY, Clausen H, Hanover JA", "protein_xref_pubmed", "33925313", "protein_xref_oglcnac_db", "P06002", "G49108TO" ], [ "P07207-1", "O-linked-N-acetylglucosamine on extracellular protein domains mediates epithelial cell-matrix interactions.", "Nature communications", "2011 Dec 13", "Sakaidani Y, Nomura T, Matsuura A, Ito M, Suzuki E, Murakami K, Nadano D, Matsuda T, Furukawa K, Okajima T", "protein_xref_pubmed", "22158438", "protein_xref_oglcnac_db", "P07207", "G49108TO" ], [ "P07207-1", "Structural Divergence in O-GlcNAc Glycans Displayed on Epidermal Growth Factor-like Repeats of Mammalian Notch1.", "Molecules (Basel, Switzerland)", "2018 Jul 17", "Ogawa M, Senoo Y, Ikeda K, Takeuchi H, Okajima T", "protein_xref_pubmed", "30018219", "protein_xref_oglcnac_db", "P07207", "G49108TO" ], [ "P07207-1", "The EGF repeat-specific O-GlcNAc-transferase Eogt interacts with notch signaling and pyrimidine metabolism pathways in Drosophila.", "PloS one", "2013", "Muller R, Jenny A, Stanley P", "protein_xref_pubmed", "23671640", "protein_xref_oglcnac_db", "P07207", "G49108TO" ], [ "P07207-1", "O-linked N-acetylglucosamine is present on the extracellular domain of notch receptors.", "The Journal of biological chemistry", "2008 Dec 19", "Matsuura A, Ito M, Sakaidani Y, Kondo T, Murakami K, Furukawa K, Nadano D, Matsuda T, Okajima T", "protein_xref_pubmed", "18948267", "protein_xref_oglcnac_db", "P07207", "G49108TO" ], [ "P07207-1", "Mapping Sites of O-Glycosylation and Fringe Elongation on Drosophila Notch.", "The Journal of biological chemistry", "2016 Jul 29", "Harvey BM, Rana NA, Moss H, Leonardi J, Jafar-Nejad H, Haltiwanger RS", "protein_xref_pubmed", "27268051", "protein_xref_oglcnac_db", "P07207", "G49108TO" ], [ "P07486-1", "Tagging-via-substrate 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], [ "P18053-1", "Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.", "Journal of proteome research", "2005 May-Jun", "Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y", "protein_xref_pubmed", "15952742", "protein_xref_oglcnac_db", "P18053", "G49108TO" ] ] }, "readme": "Name\n - Fruitfly Proteoform O-GlcNAc Glycosylation Citations (MCW)\n\nVersion\n - v-2.1.1\n\nCreated on\n - 2022-09-02T10:30:49.524483\n\nModified on\n - 2023-03-14T17:10:40.590Z\n\nCreated by\n - [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - Stephanie Olivier-Van Stichelen [solivier@mcw.edu], Eugenia Wulff-Fuentes [ewulff@mcw.edu], Rex R. Berendt [rberendt@mcw.edu], Logan Massman [lmassman@mcw.edu], Laura Danner [ldanner@mcw.edu]\n\nChecksum\n - \n\nUsability Domain\n - The Fruitfly O-GlcNAc Glycosylation Citations (MCW) dataset contains details of the publication present in the dataset Fruitfly O-GlcNAc Glycosylation Sites (MCW) httpss://data.glygen.org/GLY_000517, contributed by Stephanie Olivier's group.\n\nDescription Domain\n Keywords\n - O-GlcNAc\n - Publications\n - Citations\n - PubMed\n - MCW\n - Glycosylation\n\n Pipeline Steps\n - Step-1: The script extracts the PMID from the dataset and uses the Entrez API to retrieve the publication details and extracts in a csv dataset. \n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-proteoform-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: fruitfly_proteoform_glycosylation_sites_oglcnac_mcw.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/fruitfly_proteoform_glycosylation_sites_oglcnac_mcw.csv\n Output Subdomain\n Name: fruitfly_proteoform_citations_glycosylation_sites_oglcnac_mcw.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/fruitfly_proteoform_citations_glycosylation_sites_oglcnac_mcw.csv\n Name: fruitfly_proteoform_citations_glycosylation_sites_oglcnac_mcw.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/fruitfly_proteoform_citations_glycosylation_sites_oglcnac_mcw.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"284\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"17\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"13\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"17\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"17\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"17\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"284\"\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.1.1/reviewed/fruitfly_proteoform_citations_glycosylation_sites_oglcnac_mcw.csv" }