{
    "bcoid": "GLY_000607",
    "title": "Human Proteoform Phosphorylation Citations (UniProtKB)",
    "description": "",
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                "Journal of proteome research",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
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                "A quantitative atlas of mitotic phosphorylation.",
                "Proceedings of the National Academy of Sciences of the United States of America",
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                "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.",
                "Journal of proteomics",
                "2014 Jan 16",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
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                "A quantitative atlas of mitotic phosphorylation.",
                "Proceedings of the National Academy of Sciences of the United States of America",
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                "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.",
                "Science signaling",
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                "Mayya V, Lundgren DH, Hwang SI, Rezaul K, Wu L, Eng JK, Rodionov V, Han DK",
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                "Science signaling",
                "2011 Mar 15",
                "Rigbolt KT, Prokhorova TA, Akimov V, Henningsen J, Johansen PT, Kratchmarova I, Kassem M, Mann M, Olsen JV, Blagoev B",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
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                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
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                "Oppermann FS, Gnad F, Olsen JV, Hornberger R, Greff Z, Keri G, Mann M, Daub H",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
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                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
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                "Journal of proteome research",
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                "2014 Jan 16",
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                "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.",
                "Journal of proteomics",
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                "Bian Y, Song C, Cheng K, Dong M, Wang F, Huang J, Sun D, Wang L, Ye M, Zou H",
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                "Q9P2E9"
            ],
            [
                "Q9P2E9-1",
                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
                "23186163",
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            ],
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                "Q99733-1",
                "A quantitative atlas of mitotic phosphorylation.",
                "Proceedings of the National Academy of Sciences of the United States of America",
                "2008 Aug 5",
                "Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP",
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                "Q99733-1",
                "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.",
                "Science signaling",
                "2010 Jan 12",
                "Olsen JV, Vermeulen M, Santamaria A, Kumar C, Miller ML, Jensen LJ, Gnad F, Cox J, Jensen TS, Nigg EA, Brunak S, Mann M",
                "protein_xref_pubmed",
                "20068231",
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            [
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
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            [
                "Q9BQ48-1",
                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
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                "A quantitative atlas of mitotic phosphorylation.",
                "Proceedings of the National Academy of Sciences of the United States of America",
                "2008 Aug 5",
                "Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
                "23186163",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
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                "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.",
                "Journal of proteomics",
                "2014 Jan 16",
                "Bian Y, Song C, Cheng K, Dong M, Wang F, Huang J, Sun D, Wang L, Ye M, Zou H",
                "protein_xref_pubmed",
                "24275569",
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                "A quantitative atlas of mitotic phosphorylation.",
                "Proceedings of the National Academy of Sciences of the United States of America",
                "2008 Aug 5",
                "Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
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                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
                "23186163",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
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                "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.",
                "Journal of proteomics",
                "2014 Jan 16",
                "Bian Y, Song C, Cheng K, Dong M, Wang F, Huang J, Sun D, Wang L, Ye M, Zou H",
                "protein_xref_pubmed",
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                "Journal of proteome research",
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                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
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                "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.",
                "Science signaling",
                "2009 Aug 18",
                "Mayya V, Lundgren DH, Hwang SI, Rezaul K, Wu L, Eng JK, Rodionov V, Han DK",
                "protein_xref_pubmed",
                "19690332",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
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                "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.",
                "Science signaling",
                "2011 Mar 15",
                "Rigbolt KT, Prokhorova TA, Akimov V, Henningsen J, Johansen PT, Kratchmarova I, Kassem M, Mann M, Olsen JV, Blagoev B",
                "protein_xref_pubmed",
                "21406692",
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            [
                "Q9BRR9-1",
                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
                "23186163",
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            [
                "Q9BRR9-1",
                "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.",
                "Science signaling",
                "2009 Aug 18",
                "Mayya V, Lundgren DH, Hwang SI, Rezaul K, Wu L, Eng JK, Rodionov V, Han DK",
                "protein_xref_pubmed",
                "19690332",
                "protein_xref_uniprotkb",
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                "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.",
                "Science signaling",
                "2010 Jan 12",
                "Olsen JV, Vermeulen M, Santamaria A, Kumar C, Miller ML, Jensen LJ, Gnad F, Cox J, Jensen TS, Nigg EA, Brunak S, Mann M",
                "protein_xref_pubmed",
                "20068231",
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                "A probability-based approach for high-throughput protein phosphorylation analysis and site localization.",
                "Nature biotechnology",
                "2006 Oct",
                "Beausoleil SA, Villen J, Gerber SA, Rush J, Gygi SP",
                "protein_xref_pubmed",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
                "23186163",
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            [
                "Q9P206-1",
                "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.",
                "Science signaling",
                "2011 Mar 15",
                "Rigbolt KT, Prokhorova TA, Akimov V, Henningsen J, Johansen PT, Kratchmarova I, Kassem M, Mann M, Olsen JV, Blagoev B",
                "protein_xref_pubmed",
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                "Human phosphatidylinositol 4-kinase isoform PI4K92. Expression of the recombinant enzyme and determination of multiple phosphorylation sites.",
                "European journal of biochemistry",
                "2001 Apr",
                "Suer S, Sickmann A, Meyer HE, Herberg FW, Heilmeyer LM Jr",
                "protein_xref_pubmed",
                "11277933",
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                "Proceedings of the National Academy of Sciences of the United States of America",
                "2008 Aug 5",
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                "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.",
                "Science signaling",
                "2010 Jan 12",
                "Olsen JV, Vermeulen M, Santamaria A, Kumar C, Miller ML, Jensen LJ, Gnad F, Cox J, Jensen TS, Nigg EA, Brunak S, Mann M",
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                "Toward a comprehensive characterization of a human cancer cell phosphoproteome.",
                "Journal of proteome research",
                "2013 Jan 4",
                "Zhou H, Di Palma S, Preisinger C, Peng M, Polat AN, Heck AJ, Mohammed S",
                "protein_xref_pubmed",
                "23186163",
                "protein_xref_uniprotkb",
                "Q9UBF8"
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            [
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                "A quantitative atlas of mitotic phosphorylation.",
                "Proceedings of the National Academy of Sciences of the United States of America",
                "2008 Aug 5",
                "Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP",
                "protein_xref_pubmed",
                "18669648",
                "protein_xref_uniprotkb",
                "Q9UHV7"
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        ]
    },
    "readme": "Name\n   - Human Proteoform Phosphorylation Citations (UniProtKB)\n\nVersion\n   - v-2.1.1\n\nCreated on\n  - 2021-10-15T08:00:04.645468\n\nModified on\n   - 2023-03-14T17:04:43.841Z\n\nCreated by\n   -  [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nDescription Domain\n   Keywords\n   - publications\n   - PMID\n   - journal\n   - citations\n   - authors\n   - UniProtKB\n   - PubMed\n   - Phosphorylation\n\nExecution Domain\n   Scripts\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: human_proteoform_phosphorylation_sites_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/human_proteoform_phosphorylation_sites_uniprotkb.csv\n   Output Subdomain\n      Name: human_proteoform_citations_phosphorylation_sites_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/human_proteoform_citations_phosphorylation_sites_uniprotkb.csv\n      Name: human_proteoform_citations_phosphorylation_sites_uniprotkb.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/human_proteoform_citations_phosphorylation_sites_uniprotkb.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"6116\"\n      Name: \"title\"\n     Description: \"Title of the published article in the journal\"\n      Unique Values: \"884\"\n      Name: \"journal_name\"\n     Description: \"The name of the journal in which the article is published\"\n      Unique Values: \"149\"\n      Name: \"publication_date\"\n     Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n      Unique Values: \"742\"\n      Name: \"authors\"\n     Description: \"NA\"\n      Unique Values: \"884\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"884\"\n      Name: \"src_xref_key\"\n     Description: \"Source Xref  key\"\n      Unique Values: \"1\"\n      Name: \"src_xref_id\"\n     Description: \"Source X-ref ID\"\n      Unique Values: \"6117\"",
    "downloadurl": "/ln2data/releases/data/v-2.1.1/reviewed/human_proteoform_citations_phosphorylation_sites_uniprotkb.csv"
}
