{ "bcoid": "GLY_000251", "title": "Rat Proteoform Citations (UniCarbKB)", "description": "The Rat Proteoform Citations (UniCarbKB) contains rat [taxid:10116] publication information of glycoproteins ...", "filename": "rat_proteoform_citations_glycosylation_sites_unicarbkb.csv", "filetype": "csv", "categories": { "species": [ "Rattus norvegicus" ], "molecule": [ "Proteoform" ], "tags": [ "Protein Citations" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "P01830-1...", "N-Glycosylat..." ], [ "P01830-1...", "N-Glycosylat..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { 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"P01830-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P01830", "G92050GC" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P01830", "G79941IJ" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P01830", "G79941IJ" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P01830", "G12580WI" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P01830", "G12580WI" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P01830", "G44953PJ" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P01830", "G44953PJ" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P01830", "G60923RB" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P01830", "G60923RB" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P01830", "G68318VE" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P01830", "G68318VE" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P01830", "G83555HU" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P01830", "G83555HU" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P01830", "G27622TD" ], [ "P01830-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P01830", "G27622TD" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G41044JW" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G41044JW" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G95678HJ" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G95678HJ" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G11115RO" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G11115RO" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G99679NM" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G99679NM" ], [ 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"protein_xref_unicarbkb", "P31596", "G94917XT" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G37818NZ" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G37818NZ" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G06247RL" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G06247RL" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G85144OK" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G85144OK" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G09406IK" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G09406IK" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G27947YN" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G27947YN" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G36670VW" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G36670VW" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P31596", "G88374WZ" ], [ "P31596-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P31596", "G88374WZ" ], [ "P13638-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P13638", "G31852PQ" ], [ "P13638-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P13638", "G31852PQ" ], [ "P13638-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P13638", "G41247ZX" ], [ "P13638-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P13638", "G41247ZX" ], [ "P13638-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P13638", "G02815KT" ], [ "P13638-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P13638", "G02815KT" ], [ "P13638-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P13638", "G92050GC" ], [ "P13638-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P13638", "G92050GC" ], [ "P07340-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", 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MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P07340", "G44953PJ" ], [ "P07340-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P07340", "G44953PJ" ], [ "Q63564-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "Q63564", "G94917XT" ], [ "Q63564-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "Q63564", "G94917XT" ], [ "Q63564-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "Q63564", "G06247RL" ], [ "Q63564-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "Q63564", "G06247RL" ], [ "Q63564-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "Q63564", "G09406IK" ], [ "Q63564-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "Q63564", "G09406IK" ], [ "Q63564-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "Q63564", "G79941IJ" ], [ "Q63564-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "Q63564", "G79941IJ" ], [ "P07825-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P07825", "G12580WI" ], [ "P07825-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P07825", "G12580WI" ], [ "P07825-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P07825", "G81572SC" ], [ "P07825-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P07825", "G81572SC" ], [ "P07825-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P07825", "G44953PJ" ], [ "P07825-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P07825", "G44953PJ" ], [ "P07825-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "P07825", "G68318VE" ], [ "P07825-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "P07825", "G68318VE" ], [ "Q00960-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "Q00960", "G68318VE" ], [ "Q00960-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "Q00960", "G68318VE" ], [ "Q00960-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "Q00960", "G41247ZX" ], [ "Q00960-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "Q00960", "G41247ZX" ], [ "Q00960-1", "N-Glycosylation in isolated rat nerve terminals.", "Molecular omics", "2021 Aug 1", "Matthies I, Abrahams JL, Jensen P, Oliveira T, Kolarich D, Larsen MR", "protein_xref_pubmed", "34106099", "protein_xref_unicarbkb", "Q00960", "G80920RR" ], [ "Q00960-1", "N-Glycosylation in isolated rat nerve terminals", "Molecular Omics", "2021", "Matthies I., Abrahams J.L., Jensen P., Oliveira T., Kolarich D., Larsen M.R.", "protein_xref_doi", "10.1039/D0MO00044B", "protein_xref_unicarbkb", "Q00960", "G80920RR" ] ] }, "readme": "Name\n - Rat Proteoform Citations (UniCarbKB)\n\nVersion\n - v-2.1.1\n\nCreated on\n - 2019-09-06T14:06:38.978102\n\nModified on\n - 2023-03-14T16:34:23.531Z\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - Not Applicable []\n\nChecksum\n - \n\nUsability Domain\n - The Rat Proteoform Citations (UniCarbKB) contains rat [taxid:10116] publication information of glycoproteins from UniCarbKB. The script accesses the NCBI ENTREZ infrastructure to retrieve the publication information of the given PMID from UniCarbKB. The dataset is contributed by UniCarbKB and processed by GlyGen. If you use this dataset please provide proper attribution to UniCarbKB and GlyGen [UniCarbKB - https://academic.oup.com/nar/article/42/D1/D215/1052197 ,https://doi.org/10.1093/nar/gkt1128]. \n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - UniCarbKB\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the input file for PMIDs and accesses the NCBI Entrez infrastructure to download the publication information of the corresponding PMIDs. \n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-proteoform-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: doi_citations.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/compiled/doi_citations.csv\n Name: rat_proteoform_glycosylation_sites_unicarbkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/rat_proteoform_glycosylation_sites_unicarbkb.csv\n Output Subdomain\n Name: rat_proteoform_citations_glycosylation_sites_unicarbkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/rat_proteoform_citations_glycosylation_sites_unicarbkb.csv\n Name: rat_proteoform_citations_glycosylation_sites_unicarbkb.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/rat_proteoform_citations_glycosylation_sites_unicarbkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"155\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"9\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"6\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"9\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"9\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"2\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"9\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"155\"\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"178\"", "downloadurl": "/ln2data/releases/data/v-2.1.1/reviewed/rat_proteoform_citations_glycosylation_sites_unicarbkb.csv" }