{ "bcoid": "GLY_000235", "title": "Mouse Protein Citations (RefSeq)", "description": "The Mouse Protein Citations (RefSeq) datasets contains mouse [taxid:10090] UniProtKB accessions mapped ...", "filename": "mouse_protein_citations_refseq.csv", "filetype": "csv", "categories": { "species": [ "Mus musculus" ], "molecule": [ "Protein" ], "tags": [ "Protein Citations" ], "file_type": [ "csv" ], "status": [ "Reviewed" ], "scope": [ "internal" ] }, "minitable": { "content": [ [ "Q9CQN6-1...", "Discovery of..." ], [ "Q6EDY6-1...", "Actin-cappin..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "Q9CQN6-1", "Discovery of genes essential for heme biosynthesis through large-scale gene expression analysis.", "Cell metabolism", "2009 Aug", "Nilsson R, Schultz IJ, Pierce EL, Soltis KA, Naranuntarat A, Ward DM, Baughman JM, Paradkar PN, Kingsley PD, Culotta VC, Kaplan J, Palis J, Paw BH, Mootha VK", "protein_xref_pubmed", "19656490", "protein_xref_refseq", "NP_079663" ], [ "Q6EDY6-1", "Actin-capping proteins play essential roles in the asymmetric division of maturing mouse oocytes.", "Journal of cell science", "2015 Jan 1", "Jo YJ, Jang WI, Namgoong S, Kim NH", "protein_xref_pubmed", "25395583", "protein_xref_refseq", "NP_001298051" ], [ "Q60876-1", "Muscle 4EBP1 activation modifies the structure and function of the neuromuscular junction in mice.", "Nature communications", "2022-12-17", "Ang Seok-Ting J, Crombie Elisa M, Dong Han, Tan Kuan-Ting, Hernando Adriel, Yu Dejie, Adamson Stuart, Kim Seonyoung, Withers Dominic J, Huang Hua, Tsai Shih-Yin", "protein_xref_pubmed", "36526657", "protein_xref_refseq", "NP_031944" ], [ "Q9CX47-1", "XRCC2 mutation causes meiotic arrest, azoospermia and infertility.", "Journal of medical genetics", "2018 Sep", "Yang Y, Guo J, Dai L, Zhu Y, Hu H, Tan L, Chen W, Liang D, He J, Tu M, Wang K, Wu L", "protein_xref_pubmed", "30042186", "protein_xref_refseq", "NP_065595" ], [ "Q921U8-1", "Smoothelin-B deficiency results in reduced arterial contractility, hypertension, and cardiac hypertrophy in mice.", "Circulation", "2008 Aug 19", "Rensen SS, Niessen PM, van Deursen JM, Janssen BJ, Heijman E, Hermeling E, Meens M, Lie N, Gijbels MJ, Strijkers GJ, Doevendans PA, Hofker MH, De Mey JG, van Eys GJ", "protein_xref_pubmed", "18678771", "protein_xref_refseq", "NP_001152756" ], [ "Q9Z0H4-1", "Interleukin-10 control of pre-miR155 maturation involves CELF2.", "PloS one", "2020", "Yoon JSJ, Wu MK, Zhu TH, Zhao H, Cheung ST, Chamberlain TC, Mui AL", "protein_xref_pubmed", "32324763", "protein_xref_refseq", "NP_001297376" ], [ "Q9JIC3-1", "Deficiency in SNM1 abolishes an early mitotic checkpoint induced by spindle stress.", "Molecular and cellular biology", "2004 Dec", "Akhter S, Richie CT, Deng JM, Brey E, Zhang X, Patrick C Jr, Behringer RR, Legerski RJ", "protein_xref_pubmed", "15542852", "protein_xref_refseq", "NP_061301" ], [ "O08707-1", "Analysis of lung stromal expression of the atypical chemokine receptor ACKR2 reveals unanticipated expression in murine blood endothelial cells.", "European journal of immunology", "2020 May", "Hansell CAH, Love S, Pingen M, Wilson GJ, MacLeod M, Graham GJ", "protein_xref_pubmed", "32114694", "protein_xref_refseq", "NP_001263648" ], [ "Q8CDG5-1", "Loss of CREBRF Reduces Anxiety-like Behaviors and Circulating Glucocorticoids in Male and Female Mice.", "Endocrinology", "2020 Nov 1", "Frahm KA, Williams AA, Wood AN, Ewing MC, Mattila PE, Chuan BW, Guo L, Shah FA, O'Donnell CP, Lu R, DeFranco DB", "protein_xref_pubmed", "32901804", "protein_xref_refseq", "NP_084146" ], [ "E9Q5I3-1", "The mouse Muc5b mucin gene: cDNA and genomic structures, chromosomal localization and expression.", "The Biochemical journal", "2002 May 1", "Escande F, Porchet N, Aubert JP, Buisine MP", "protein_xref_pubmed", "11964160", "protein_xref_refseq", "NP_083077" ], [ "Q9EPK5-1", "TAZ interacts with TTF-1 and regulates expression of surfactant protein-C.", "The Journal of biological chemistry", "2004 Apr 23", "Park KS, Whitsett JA, Di Palma T, Hong JH, Yaffe MB, Zannini M", "protein_xref_pubmed", "14970209", "protein_xref_refseq", "NP_001161753" ], [ "Q9CWS0-1", "Mechanical force promotes dimethylarginine dimethylaminohydrolase 1-mediated hydrolysis of the metabolite asymmetric dimethylarginine to enhance bone formation.", "Nature communications", "2022 Jan 10", "Xie Z, Hou L, Shen S, Wu Y, Wang J, Jie Z, Zhao X, Li X, Zhang X, Chen J, Xu W, Ning L, Ma Q, Wang S, Wang H, Yuan P, Fang X, Qin A, Fan S", "protein_xref_pubmed", "35013196", "protein_xref_refseq", "NP_081269" ], [ "P58391-1", "AMPK upregulates KCa2.3 channels and ameliorates endothelial dysfunction in diet-induced obese mice.", "Biochemical pharmacology", "2021 Jan", "Pang ZD, Wang Y, Song Z, She G, Ma XZ, Sun X, Wu W, Lai BC, Zhang J, Zhang Y, Du XJ, Shyy JYJ, Deng XL", "protein_xref_pubmed", "33186592", "protein_xref_refseq", "NP_536714" ], [ "D3YYM4-1", "Identification of the C-terminal region in Amelogenesis Imperfecta causative protein WDR72 required for Golgi localization.", "Scientific reports", "2022 Mar 17", "Husein D, Alamoudi A, Ohyama Y, Mochida H, Ritter B, Mochida Y", "protein_xref_pubmed", "35301423", "protein_xref_refseq", "NP_001028672" ], [ "Q9ERD8-1", "gamma-Parvin is dispensable for hematopoiesis, leukocyte trafficking, and T-cell-dependent antibody response.", "Molecular and cellular biology", "2006 Mar", "Chu H, Thievessen I, Sixt M, Lammermann T, Waisman A, Braun A, Noegel AA, Fassler R", "protein_xref_pubmed", "16479001", "protein_xref_refseq", "NP_001155972" ], [ "P30204-1", "Role of macrophage scavenger receptor MSR1 in the progression of non-alcoholic steatohepatitis.", "Frontiers in immunology", "2022", "Sheng Wei, Ji Guang, Zhang Li", "protein_xref_pubmed", "36591228", "protein_xref_refseq", "NP_001106797" ], [ "Q9DAP7-1", "Loss of the histone chaperone ASF1B reduces female reproductive capacity in mice.", "Reproduction (Cambridge, England)", "2016 May", "Messiaen S, Guiard J, Aigueperse C, Fliniaux I, Tourpin S, Barroca V, Allemand I, Fouchet P, Livera G, Vernet M", "protein_xref_pubmed", "26850882", "protein_xref_refseq", "NP_077146" ], [ "Q8VEL2-1", "Muscle-specific inositide phosphatase (MIP/MTMR14) is reduced with age and its loss accelerates skeletal muscle aging process by altering calcium homeostasis.", "Aging", "2010 Aug", "Romero-Suarez S, Shen J, Brotto L, Hall T, Mo C, Valdivia HH, Andresen J, Wacker M, Nosek TM, Qu CK, Brotto M", "protein_xref_pubmed", "20817957", "protein_xref_refseq", "NP_081125" ], [ "Q9CQR4-1", "Interacting proteins dictate function of the minimal START domain phosphatidylcholine transfer protein/StarD2.", "The Journal of biological chemistry", "2007 Oct 19", "Kanno K, Wu MK, Agate DS, Fanelli BJ, Wagle N, Scapa EF, Ukomadu C, Cohen DE", "protein_xref_pubmed", "17704541", "protein_xref_refseq", "NP_080066" ], [ "O35284-1", "BATF promotes group 2 innate lymphoid cell-mediated lung tissue protection during acute respiratory virus infection.", "Science immunology", "2022 Jan 14", "Wu X, Kasmani MY, Zheng S, Khatun A, Chen Y, Winkler W, Zander R, Burns R, Taparowsky EJ, Sun J, Cui W", "protein_xref_pubmed", "35030033", "protein_xref_refseq", "NP_058047" ], [ "P56481-1", "Intestinal Gastrin/CCKBR (Cholecystokinin B Receptor) Ameliorates Salt-Sensitive Hypertension by Inhibiting Intestinal Na(+)/H(+) Exchanger 3 Activity Through a PKC (Protein Kinase C)-Mediated NHERF1 and NHERF2 Pathway.", "Hypertension (Dallas, Tex. : 1979)", "2022 Aug", "Jiang X, Liu Y, Zhang XY, Liu X, Liu X, Wu X, Jose PA, Duan S, Xu FJ, Yang Z", "protein_xref_pubmed", "35674015", "protein_xref_refseq", "NP_031653" ], [ "Q3UPW2-1", "Epithelial tumor suppressor ELF3 is a lineage-specific amplified oncogene in lung adenocarcinoma.", "Nature communications", "2019 Nov 28", "Enfield KSS, Marshall EA, Anderson C, Ng KW, Rahmati S, Xu Z, Fuller M, Milne K, Lu D, Shi R, Rowbotham DA, Becker-Santos DD, Johnson FD, English JC, MacAulay CE, Lam S, Lockwood WW, Chari R, Karsan A, Jurisica I, Lam WL", "protein_xref_pubmed", "31780666", "protein_xref_refseq", "NP_001156603" ], [ "Q80VH0-1", "ZFP521 contributes to pre-B-cell lymphomagenesis through modulation of the pre-B-cell receptor signaling pathway.", "Oncogene", "2016 Jun 23", "Hiratsuka T, Takei Y, Ohmori R, Imai Y, Ozeki M, Tamaki K, Haga H, Nakamura T, Tsuruyama T", "protein_xref_pubmed", "26522721", "protein_xref_refseq", "NP_001297678" ], [ "Q9JL10-1", "Sei-1 promotes double minute chromosomes formation through activation of the PI3K/Akt/BRCA1-Abraxas pathway and induces double-strand breaks in NIH-3T3 fibroblasts.", "Cell death & disease", "2018 Mar 1", "Tian X, Liu C, Wang X, Wang F, Wang L, Xu L, Ma J, Gao Y, Bao Y, Wang F, Sun L, Wei J, Lin C, Zhang H, Zhu G, Guan X, Fu S, Zhang C", "protein_xref_pubmed", "29497033", "protein_xref_refseq", "NP_061290" ], [ "E9Q842-1", "Nav2 is necessary for cranial nerve development and blood pressure regulation.", "Neural development", "2010 Feb 25", "McNeill EM, Roos KP, Moechars D, Clagett-Dame M", "protein_xref_pubmed", "20184720", "protein_xref_refseq", "NP_780481" ], [ "Q9D198-1", "Disruption of murine mp29/Syf2/Ntc31 gene results in embryonic lethality with aberrant checkpoint response.", "PloS one", "2012", "Chen CH, Chu PC, Lee L, Lien HW, Lin TL, Fan CC, Chi P, Huang CJ, Chang MS", "protein_xref_pubmed", "22448250", "protein_xref_refseq", "NP_081056" ], [ "P70236-1", "MicroRNA-370 carried by M2 macrophage-derived exosomes alleviates asthma progression through inhibiting the FGF1/MAPK/STAT1 axis.", "International journal of biological sciences", "2021", "Li C, Deng C, Zhou T, Hu J, Dai B, Yi F, Tian N, Jiang L, Dong X, Zhu Q, Zhang S, Cui H, Cao L, Shang Y", "protein_xref_pubmed", "33994863", "protein_xref_refseq", "NP_036073" ], [ "Q9JKK0-1", "Differential expression of members of the RCAN family of calcineurin regulators suggests selective functions for these proteins in the brain.", "The European journal of neuroscience", "2007 Sep", "Porta S, Marti E, de la Luna S, Arbones ML", "protein_xref_pubmed", "17767500", "protein_xref_refseq", "NP_075356" ], [ "Q64010-1", "A novel viral oncogene with structural similarity to phospholipase C.", "Nature", "1988 Mar 17", "Mayer BJ, Hamaguchi M, Hanafusa H", "protein_xref_pubmed", "2450282", "protein_xref_refseq", "NP_598417" ], [ "Q9D0S4-1", "Neur1 and Neur2 are required for hippocampus-dependent spatial memory and synaptic plasticity.", "Hippocampus", "2020 Nov", "Lee J, Yoon KJ, Park P, Lee C, Kim MJ, Han DH, Kim JI, Kim S, Lee HR, Lee Y, Jang EH, Ko HG, Kong YY, Kaang BK", "protein_xref_pubmed", "32644222", "protein_xref_refseq", "NP_001076443" ], [ "Q99LJ8-1", "Identification of a receptor necessary for Nogo-B stimulated chemotaxis and morphogenesis of endothelial cells.", "Proceedings of the National Academy of Sciences of the United States of America", "2006 Jul 18", "Miao RQ, Gao Y, Harrison KD, Prendergast J, Acevedo LM, Yu J, Hu F, Strittmatter SM, Sessa WC", "protein_xref_pubmed", "16835300", "protein_xref_refseq", "NP_084526" ], [ "Q9CQ70-1", "Histone Variant H2A.L.2 Guides Transition Protein-Dependent Protamine Assembly in Male Germ Cells.", "Molecular cell", "2017 Apr 6", "Barral S, Morozumi Y, Tanaka H, Montellier E, Govin J, de Dieuleveult M, Charbonnier G, Coute Y, Puthier D, Buchou T, Boussouar F, Urahama T, Fenaille F, Curtet S, Hery P, Fernandez-Nunez N, Shiota H, Gerard M, Rousseaux S, Kurumizaka H, Khochbin S", "protein_xref_pubmed", "28366643", "protein_xref_refseq", "NP_080903" ], [ "Q9Z222-1", "N-linked polylactosamine glycan synthesis is regulated by co-expression of beta3GnT2 and GCNT2.", "Journal of cellular physiology", "2014 Apr", "Henion TR, Schwarting GA", "protein_xref_pubmed", "24105809", "protein_xref_refseq", "NP_001162585" ], [ "Q8BMS2-1", "The extracellular matrix protein mindin is a pattern-recognition molecule for microbial pathogens.", "Nature immunology", "2004 Jan", "He YW, Li H, Zhang J, Hsu CL, Lin E, Zhang N, Guo J, Forbush KA, Bevan MJ", "protein_xref_pubmed", "14691481", "protein_xref_refseq", "NP_598664" ], [ "Q9WV34-1", "Membrane palmitoylated protein 2 is a synaptic scaffold protein required for synaptic SK2-containing channel function.", "eLife", "2016 Feb 12", "Kim G, Lujan R, Schwenk J, Kelley MH, Aguado C, Watanabe M, Fakler B, Maylie J, Adelman JP", "protein_xref_pubmed", "26880549", "protein_xref_refseq", "NP_057904" ], [ "Q9ES57-1", "CD200 Immune-Checkpoint Peptide Elicits an Anti-glioma Response Through the DAP10 Signaling Pathway.", "Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics", "2021 Jul", "Ampudia-Mesias E, Puerta-Martinez F, Bridges M, Zellmer D, Janeiro A, Strokes M, Sham YY, Taher A, Castro MG, Moertel CL, Pluhar GE, Olin MR", "protein_xref_pubmed", "33829411", "protein_xref_refseq", "NP_067300" ], [ "Q8BWY3-1", "Reverse transcriptase of Moloney murine leukemia virus binds to eukaryotic release factor 1 to modulate suppression of translational termination.", "Cell", "2003 Oct 31", "Orlova M, Yueh A, Leung J, Goff SP", "protein_xref_pubmed", "14636559", "protein_xref_refseq", "NP_659115" ], [ "Q9JM73-1", "Transcription Factors YAP/TAZ and SRF Cooperate To Specify Renal Myofibroblasts in the Developing Mouse Kidney.", "Journal of the American Society of Nephrology : JASN", "2022-08-02", "Drake Keri A, Chaney Christopher, Patel Mohita, Das Amrita, Bittencourt Julia, Cohn Martin, Carroll Thomas J", "protein_xref_pubmed", "35918150", "protein_xref_refseq", "NP_065239" ], [ "Q6VYH9-1", "Expression of the adaptor protein hematopoietic Src homology 2 is up-regulated in response to stimuli that promote survival and differentiation of B cells.", "Journal of immunology (Baltimore, Md. : 1950)", "2006 Apr 1", "Herrin BR, Justement LB", "protein_xref_pubmed", "16547253", "protein_xref_refseq", "NP_922935" ], [ "Q60837-1", "IL12Rbeta1DeltaTM is a secreted product of il12rb1 that promotes control of extrapulmonary tuberculosis.", "Infection and immunity", "2015 Feb", "Ray AA, Fountain JJ, Miller HE, Cooper AM, Robinson RT", "protein_xref_pubmed", "25404030", "protein_xref_refseq", "NP_032379" ], [ "Q9JIP4-1", "Expression of neural connexins and pannexin1 in the hippocampus and inferior olive: a quantitative approach.", "Brain research. Molecular brain research", "2005 Jan 5", "Weickert S, Ray A, Zoidl G, Dermietzel R", "protein_xref_pubmed", "15661370", "protein_xref_refseq", "NP_062355" ], [ "O08609-1", "The glucose-sensing transcription factor MLX promotes myogenesis via myokine signaling.", "Genes & development", "2015 Dec 1", "Hunt LC, Xu B, Finkelstein D, Fan Y, Carroll PA, Cheng PF, Eisenman RN, Demontis F", "protein_xref_pubmed", "26584623", "protein_xref_refseq", "NP_035680" ], [ "Q8K1S4-1", "GPC3-Unc5 receptor complex structure and role in cell migration.", "Cell", "2022-10-13", "Akkermans Onno, Delloye-Bourgeois C\u00e9line, Peregrina Claudia, Carrasquero-Ordaz Maria, Kokolaki Maria, Berbeira-Santana Miguel, Chavent Matthieu, Reynaud Florie, Raj Ritu, Agirre Jon, Aksu Metin, White Eleanor S, Lowe Edward, Ben Amar Dounia, Zaballa Sofia, Huo Jiandong, Pakos Irene, McCubbin Patrick T N, Comoletti Davide, Owens Raymond J, Robinson Carol V, Castellani Val\u00e9rie, Del Toro Daniel, Seiradake Elena", "protein_xref_pubmed", "36240740", "protein_xref_refseq", "NP_001298057" ], [ "P70453-1", "Phosphodiesterase 7A-deficient mice have functional T cells.", "Journal of immunology (Baltimore, Md. : 1950)", "2003 Dec 15", "Yang G, McIntyre KW, Townsend RM, Shen HH, Pitts WJ, Dodd JH, Nadler SG, McKinnon M, Watson AJ", "protein_xref_pubmed", "14662840", "protein_xref_refseq", "NP_001116231" ], [ "Q6DIC6-1", "Significant differences between mouse and human trophinins are revealed by their expression patterns and targeted disruption of mouse trophinin gene.", "Biology of reproduction", "2002 Feb", "Nadano D, Sugihara K, Paria BC, Saburi S, Copeland NG, Gilbert DJ, Jenkins NA, Nakayama J, Fukuda MN", "protein_xref_pubmed", "11804944", "protein_xref_refseq", "NP_062421" ], [ "P07758-1", "Placental HTRA1 cleaves alpha1-antitrypsin to generate a NET-inhibitory peptide.", "Blood", "2021 Sep 16", "Campbell RA, Campbell HD, Bircher JS, de Araujo CV, Denorme F, Crandell JL, Rustad JL, Monts J, Cody MJ, Kosaka Y, Yost CC", "protein_xref_pubmed", "34192300", "protein_xref_refseq", "NP_033269" ], [ "G5E870-1", "Mild iron overload induces TRIP12-mediated degradation of YY1 to trigger hepatic inflammation.", "Free radical biology & medicine", "2020 Dec", "Tang Y, Wang D, Niu X, Wu H, Yang J, Zhang Y, Song S, Lv D, Chai Y, Lu H, Shen H, Ling C, Li M", "protein_xref_pubmed", "33080340", "protein_xref_refseq", "NP_598736" ], [ "Q64GA5-1", "Induction of group IVC phospholipase A2 in allergic asthma: transcriptional regulation by TNFalpha in bronchoepithelial cells.", "The Biochemical journal", "2012 Feb 15", "Bickford JS, Newsom KJ, Herlihy JD, Mueller C, Keeler B, Qiu X, Walters JN, Su N, Wallet SM, Flotte TR, Nick HS", "protein_xref_pubmed", "22082005", "protein_xref_refseq", "NP_001004762" ], [ "Q62386-1", "Host-derived mannose glycans trigger a pathogenic \u03b3\u03b4 T cell/IL-17a axis in autoimmunity.", "Science translational medicine", "2023-03-15", "Alves In\u00eas, Santos-Pereira Beatriz, de la Cruz Noelia, Campar Ana, Pinto Vanda, Rodrigues Pedro M, Ara\u00fajo Marco, Santos Sofia, Ramos-Soriano Javier, Vasconcelos Carlos, Silva Roberto, Afonso Nuno, Mira Filipe, Barrias Cristina C, Alves Nuno L, Rojo Javier, Santos L\u00e9lita, Marinho Ant\u00f3nio, Pinho Salom\u00e9 S", "protein_xref_pubmed", "36921032", "protein_xref_refseq", "NP_034682" ], [ "P33173-1", "GSK3beta Impairs KIF1A Transport in a Cellular Model of Alzheimer's Disease but Does Not Regulate Motor Motility at S402.", "eNeuro", "2020 Nov/Dec", "Gan KJ, Akram A, Blasius TL, Ramser EM, Budaitis BG, Gabrych DR, Verhey KJ, Silverman MA", "protein_xref_pubmed", "33067366", "protein_xref_refseq", "NP_001281078" ], [ "Q80ZD9-1", "Alivin 1, a novel neuronal activity-dependent gene, inhibits apoptosis and promotes survival of cerebellar granule neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2003 Jul 2", "Ono T, Sekino-Suzuki N, Kikkawa Y, Yonekawa H, Kawashima S", "protein_xref_pubmed", "12843293", "protein_xref_refseq", "NP_001158035" ], [ "Q9WTX4-1", "Neuregulin 4 suppresses NASH-HCC development by restraining tumor-prone liver microenvironment.", "Cell metabolism", "2022 Sep 6", "Zhang P, Chen Z, Kuang H, Liu T, Zhu J, Zhou L, Wang Q, Xiong X, Meng Z, Qiu X, Jacks R, Liu L, Li S, Lumeng CN, Li Q, Zhou X, Lin JD", "protein_xref_pubmed", "35973424", "protein_xref_refseq", "NP_114391" ], [ "O70373-1", "Localization of the novel Xin protein to the adherens junction complex in cardiac and skeletal muscle during development.", "Developmental dynamics : an official publication of the American Association of Anatomists", "2002 Sep", "Sinn HW, Balsamo J, Lilien J, Lin JJ", "protein_xref_pubmed", "12203715", "protein_xref_refseq", "NP_035854" ], [ "Q8VDJ3-1", "HDLBP binds ER-targeted mRNAs by multivalent interactions to promote protein synthesis of transmembrane and secreted proteins.", "Nature communications", "2022 May 18", "Zinnall U, Milek M, Minia I, Vieira-Vieira CH, Muller S, Mastrobuoni G, Hazapis OG, Del Giudice S, Schwefel D, Bley N, Voigt F, Chao JA, Kempa S, Huttelmaier S, Selbach M, Landthaler M", "protein_xref_pubmed", "35585045", "protein_xref_refseq", "NP_001288293" ], [ "P33622-1", "Interventional hepatic apoC-III knockdown improves atherosclerotic plaque stability and remodeling by triglyceride lowering.", "JCI insight", "2022 Jul 8", "Ramms B, Patel S, Sun X, Pessentheiner AR, Ducasa GM, Mullick AE, Lee RG, Crooke RM, Tsimikas S, Witztum JL, Gordts PL", "protein_xref_pubmed", "35653195", "protein_xref_refseq", "NP_001276684" ], [ "A2APX8-1", "Behavioral phenotyping of young Scn1a haploinsufficient mice.", "Epilepsy & behavior : E&B", "2022-11", "Reiber Maria, Miljanovic Nina, Sch\u00f6nhoff Katharina, Palme Rupert, Potschka Heidrun", "protein_xref_pubmed", "36240579", "protein_xref_refseq", "NP_001300926" ], [ "Q61909-1", "AML1-ETO requires enhanced C/D box snoRNA/RNP formation to induce self-renewal and leukaemia.", "Nature cell biology", "2017 Jul", "Zhou F, Liu Y, Rohde C, Pauli C, Gerloff D, Kohn M, Misiak D, Baumer N, Cui C, Gollner S, Oellerich T, Serve H, Garcia-Cuellar MP, Slany R, Maciejewski JP, Przychodzen B, Seliger B, Klein HU, Bartenhagen C, Berdel WE, Dugas M, Taketo MM, Farouq D, Schwartz S, Regev A, Hebert J, Sauvageau G, Pabst C, Huttelmaier S, Muller-Tidow C", "protein_xref_pubmed", "28650479", "protein_xref_refseq", "NP_001104496" ], [ "Q6PHZ2-1", "Oxidative stress-induced autonomous activation of the calcium/calmodulin-dependent kinase II involves disulfide formation in the regulatory domain.", "The Journal of biological chemistry", "2022-11", "Rocco-Machado Nath\u00e1lia, Lai Lo, Kim Geumsoo, He Yi, Luczak Elizabeth D, Anderson Mark E, Levine Rodney L", "protein_xref_pubmed", "36220393", "protein_xref_refseq", "NP_001280595" ], [ "P97873-1", "Elastin homeostasis is altered with pelvic organ prolapse in cultures of vaginal cells from a lysyl oxidase-like 1 knockout mouse model.", "Physiological reports", "2020 Jun", "Jameson SA, Swaminathan G, Dahal S, Couri B, Kuang M, Rietsch A, Butler RS, Ramamurthi A, Damaser MS", "protein_xref_pubmed", "32533648", "protein_xref_refseq", "NP_034859" ], [ "Q8BN59-1", "Regulation of muscle differentiation and survival by Acheron.", "Mechanisms of development", "2009 Aug-Sep", "Wang Z, Glenn H, Brown C, Valavanis C, Liu JX, Seth A, Thomas JE, Karlstrom RO, Schwartz LM", "protein_xref_pubmed", "19481601", "protein_xref_refseq", "NP_080511" ], [ "Q9D9R7-1", "Male-biased expression of X-chromosomal DM domain-less Dmrt8 genes in the mouse.", "Genomics", "2006 Aug", "Veith AM, Klattig J, Dettai A, Schmidt C, Englert C, Volff JN", "protein_xref_pubmed", "16488114", "protein_xref_refseq", "NP_001033705" ], [ "P63073-1", "miR-34b-3p Inhibition of eIF4E Causes Post-stroke Depression in Adult Mice.", "Neuroscience bulletin", "2022-07-08", "Ke Xiao, Deng Manfei, Wu Zhuoze, Yu Hongyan, Yu Dian, Li Hao, Lu Youming, 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"protein_xref_refseq", "NP_080452" ], [ "Q8BMF8-1", "Precise Spatiotemporal Control of Nodal Na(+) Channel Clustering by Bone Morphogenetic Protein-1/Tolloid-like Proteinases.", "Neuron", "2020 Jun 3", "Eshed-Eisenbach Y, Devaux J, Vainshtein A, Golani O, Lee SJ, Feinberg K, Sukhanov N, Greenspan DS, Susuki K, Rasband MN, Peles E", "protein_xref_pubmed", "32209430", "protein_xref_refseq", "NP_796324" ], [ "Q4U4S6-1", "XIRP2, an actin-binding protein essential for inner ear hair-cell stereocilia.", "Cell reports", "2015 Mar 24", "Scheffer DI, Zhang DS, Shen J, Indzhykulian A, Karavitaki KD, Xu YJ, Wang Q, Lin JJ, Chen ZY, Corey DP", "protein_xref_pubmed", "25772365", "protein_xref_refseq", "NP_001019789" ] ] }, "readme": "Name\n - Mouse Protein Citations (RefSeq)\n\nVersion\n - v-2.1.1\n\nCreated on\n - 2019-09-06T14:06:38.962804\n\nModified on\n - 2022-09-26T09:04:47.954130\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Jingyue Wu [jingyue.wu@email.gwu.edu]\n\nAuthors\n - Not Applicable []\n\nChecksum\n - \n\nUsability Domain\n - The Mouse Protein Citations (RefSeq) datasets contains mouse [taxid:10090] UniProtKB accessions mapped to publication information (PMID, title, journal name, publication, date, authors of corresponding RefSeq accessions). The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen. \n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - RefSeq\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the NCBI RefSeq gpff files to extract the publication information. The script also maps RefSeq accessions to the UniProtKB Canonical accessions. \n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: mouse_protein_blacklisted_pmids_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/compiled/mouse_protein_blacklisted_pmids_uniprotkb.csv\n Name: mouse_protein_function_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/mouse_protein_function_refseq.csv\n Output Subdomain\n Name: mouse_protein_citations_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/mouse_protein_citations_refseq.csv\n Name: mouse_protein_citations_refseq.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.1.1/reviewed/mouse_protein_citations_refseq.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"12427\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"32317\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"1452\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"5189\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"32235\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"32322\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"14445\"", "downloadurl": "/ln2data/releases/data/v-2.1.1/reviewed/mouse_protein_citations_refseq.csv" }