{ "bcoid": "GLY_000723", "title": "Human Xref O-GlcNAcAtlas", "description": "Human Xref O-GlcNAcAtlas dataset contains human (taxid: 9606) UniProtKB canonical accessions mapped to ...", "filename": "human_protein_xref_oglcnac_atlas.csv", "filetype": "csv", "categories": { "species": "Homo sapiens", "molecule": "Protein", "tags": "O-GlcNAcAtlas Cross-references", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "P40425-1...", "protein_xref..." ], [ "O15417-1...", "protein_xref..." ] ], "headers": [ "uniprotkb_ca...", "xref_key..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "xref_label" } ], [ "P40425-1", "protein_xref_oglcnac_atlas", "P40425", "O-GlcNAc Atlas" ], [ "O15417-1", "protein_xref_oglcnac_atlas", "O15417", "O-GlcNAc Atlas" ], [ "O00507-1", "protein_xref_oglcnac_atlas", "O00507", "O-GlcNAc Atlas" ], [ "Q8IYD1-1", "protein_xref_oglcnac_atlas", "Q8IYD1", "O-GlcNAc Atlas" ], [ "Q8IYD8-1", "protein_xref_oglcnac_atlas", "Q8IYD8", "O-GlcNAc Atlas" ], [ "Q9UQ26-6", "protein_xref_oglcnac_atlas", "Q9UQ26", "O-GlcNAc Atlas" ], [ "Q9NPI6-1", "protein_xref_oglcnac_atlas", "Q9NPI6", "O-GlcNAc Atlas" ], [ "Q96LT6-1", "protein_xref_oglcnac_atlas", "Q96LT6", "O-GlcNAc Atlas" ], [ "P62280-1", "protein_xref_oglcnac_atlas", "P62280", "O-GlcNAc Atlas" ], [ "Q10571-1", "protein_xref_oglcnac_atlas", "Q10571", "O-GlcNAc Atlas" ], [ "Q96AQ1-1", "protein_xref_oglcnac_atlas", "Q96AQ1", "O-GlcNAc Atlas" ], [ "Q96AQ6-1", "protein_xref_oglcnac_atlas", "Q96AQ6", "O-GlcNAc Atlas" ], [ "Q6P1M9-1", "protein_xref_oglcnac_atlas", "Q6P1M9", "O-GlcNAc Atlas" ], [ "Q8WU79-1", "protein_xref_oglcnac_atlas", "Q8WU79", "O-GlcNAc Atlas" ], [ "P33778-1", "protein_xref_oglcnac_atlas", "P33778", "O-GlcNAc Atlas" ], [ "P05412-1", "protein_xref_oglcnac_atlas", "P05412", "O-GlcNAc Atlas" ], [ "Q15475-1", "protein_xref_oglcnac_atlas", "Q15475", "O-GlcNAc Atlas" ], [ "P55786-1", "protein_xref_oglcnac_atlas", "P55786", "O-GlcNAc Atlas" ], [ "P13667-1", "protein_xref_oglcnac_atlas", "P13667", "O-GlcNAc Atlas" ], [ "Q9BYW2-1", "protein_xref_oglcnac_atlas", "Q9BYW2", "O-GlcNAc Atlas" ], [ "Q49AA0-1", "protein_xref_oglcnac_atlas", "Q49AA0", "O-GlcNAc Atlas" ], [ "P05556-1", "protein_xref_oglcnac_atlas", "P05556", "O-GlcNAc Atlas" ], [ "Q02218-1", "protein_xref_oglcnac_atlas", "Q02218", "O-GlcNAc Atlas" ], [ "Q96HI0-1", "protein_xref_oglcnac_atlas", "Q96HI0", "O-GlcNAc Atlas" ], [ "Q92917-1", "protein_xref_oglcnac_atlas", "Q92917", "O-GlcNAc Atlas" ], [ "P15924-1", "protein_xref_oglcnac_atlas", "P15924", "O-GlcNAc Atlas" ], [ "A4UGR9-1", "protein_xref_oglcnac_atlas", "A4UGR9", "O-GlcNAc Atlas" ], [ "O43149-1", "protein_xref_oglcnac_atlas", "O43149", "O-GlcNAc Atlas" ], [ "O43143-1", "protein_xref_oglcnac_atlas", "O43143", "O-GlcNAc Atlas" ], [ "Q8IWV7-1", "protein_xref_oglcnac_atlas", "Q8IWV7", "O-GlcNAc Atlas" ], [ "Q9Y263-1", "protein_xref_oglcnac_atlas", "Q9Y263", "O-GlcNAc Atlas" ], [ "Q6S8J3-1", "protein_xref_oglcnac_atlas", "Q6S8J3", "O-GlcNAc Atlas" ], [ "Q8NDM7-1", "protein_xref_oglcnac_atlas", "Q8NDM7", "O-GlcNAc Atlas" ], [ "P30085-1", "protein_xref_oglcnac_atlas", "P30085", "O-GlcNAc Atlas" ], [ "P30084-1", "protein_xref_oglcnac_atlas", "P30084", "O-GlcNAc Atlas" ], [ "P07437-1", "protein_xref_oglcnac_atlas", "P07437", "O-GlcNAc Atlas" ], [ "Q96FC7-1", "protein_xref_oglcnac_atlas", "Q96FC7", "O-GlcNAc Atlas" ], [ "O95447-1", "protein_xref_oglcnac_atlas", "O95447", "O-GlcNAc Atlas" ], [ "P11498-1", "protein_xref_oglcnac_atlas", "P11498", "O-GlcNAc Atlas" ], [ "Q96PV6-2", "protein_xref_oglcnac_atlas", "Q96PV6", "O-GlcNAc Atlas" ], [ "O43264-1", "protein_xref_oglcnac_atlas", "O43264", "O-GlcNAc Atlas" ], [ "Q9Y2X0-1", "protein_xref_oglcnac_atlas", "Q9Y2X0", "O-GlcNAc Atlas" ], [ "Q9Y2X3-1", "protein_xref_oglcnac_atlas", "Q9Y2X3", "O-GlcNAc Atlas" ], [ "Q9Y2X7-1", "protein_xref_oglcnac_atlas", "Q9Y2X7", "O-GlcNAc Atlas" ], [ "Q9Y2X9-1", "protein_xref_oglcnac_atlas", "Q9Y2X9", "O-GlcNAc Atlas" ], [ "Q7Z460-1", "protein_xref_oglcnac_atlas", "Q7Z460", "O-GlcNAc Atlas" ], [ "B2RTY4-1", "protein_xref_oglcnac_atlas", "B2RTY4", "O-GlcNAc Atlas" ], [ "Q9NZZ3-1", "protein_xref_oglcnac_atlas", "Q9NZZ3", "O-GlcNAc Atlas" ], [ "Q9H1A4-1", "protein_xref_oglcnac_atlas", "Q9H1A4", "O-GlcNAc Atlas" ], [ "H0YM25-1", "protein_xref_oglcnac_atlas", "H0YM25", "O-GlcNAc Atlas" ], [ "A5YKK6-1", "protein_xref_oglcnac_atlas", "A5YKK6", "O-GlcNAc Atlas" ], [ "A0MZ66-1", "protein_xref_oglcnac_atlas", "A0MZ66", "O-GlcNAc Atlas" ], [ "Q9H4G0-1", "protein_xref_oglcnac_atlas", "Q9H4G0", "O-GlcNAc Atlas" ], [ "Q9NQZ7-1", "protein_xref_oglcnac_atlas", "Q9NQZ7", "O-GlcNAc Atlas" ], [ "O76041-1", "protein_xref_oglcnac_atlas", "O76041", "O-GlcNAc Atlas" ], [ "O14594-1", "protein_xref_oglcnac_atlas", "O14594", "O-GlcNAc Atlas" ], [ "Q9Y6W3-1", "protein_xref_oglcnac_atlas", "Q9Y6W3", "O-GlcNAc Atlas" ], [ "Q9Y243-1", "protein_xref_oglcnac_atlas", "Q9Y243", "O-GlcNAc Atlas" ], [ "P22314-1", "protein_xref_oglcnac_atlas", "P22314", "O-GlcNAc Atlas" ], [ "Q5T160-1", "protein_xref_oglcnac_atlas", "Q5T160", "O-GlcNAc Atlas" ], [ "Q8TD57-1", "protein_xref_oglcnac_atlas", "Q8TD57", "O-GlcNAc Atlas" ], [ "Q8TD55-1", "protein_xref_oglcnac_atlas", "Q8TD55", "O-GlcNAc Atlas" ], [ "Q02086-1", "protein_xref_oglcnac_atlas", "Q02086", "O-GlcNAc Atlas" ], [ "Q02083-1", "protein_xref_oglcnac_atlas", "Q02083", "O-GlcNAc Atlas" ], [ "P07942-1", "protein_xref_oglcnac_atlas", "P07942", "O-GlcNAc Atlas" ], [ "Q15306-1", "protein_xref_oglcnac_atlas", "Q15306", "O-GlcNAc Atlas" ], [ "Q9H7U1-1", "protein_xref_oglcnac_atlas", "Q9H7U1", "O-GlcNAc Atlas" ], [ "Q99808-1", "protein_xref_oglcnac_atlas", "Q99808", "O-GlcNAc Atlas" ], [ "Q00839-1", "protein_xref_oglcnac_atlas", "Q00839", "O-GlcNAc Atlas" ], [ "Q8NC51-1", "protein_xref_oglcnac_atlas", "Q8NC51", "O-GlcNAc Atlas" ], [ "Q96AD5-1", "protein_xref_oglcnac_atlas", "Q96AD5", "O-GlcNAc Atlas" ], [ "P27169-1", "protein_xref_oglcnac_atlas", "P27169", "O-GlcNAc Atlas" ], [ "Q3LI81-1", "protein_xref_oglcnac_atlas", "Q3LI81", "O-GlcNAc Atlas" ], [ "Q96KA5-1", "protein_xref_oglcnac_atlas", "Q96KA5", "O-GlcNAc Atlas" ], [ "Q6UXD7-1", "protein_xref_oglcnac_atlas", "Q6UXD7", "O-GlcNAc Atlas" ], [ "Q9H0V9-1", "protein_xref_oglcnac_atlas", "Q9H0V9", "O-GlcNAc Atlas" ], [ "Q96QE5-1", "protein_xref_oglcnac_atlas", "Q96QE5", "O-GlcNAc Atlas" ], [ "Q96QE3-1", "protein_xref_oglcnac_atlas", "Q96QE3", "O-GlcNAc Atlas" ], [ "Q6Q759-1", "protein_xref_oglcnac_atlas", "Q6Q759", "O-GlcNAc Atlas" ], [ "P82987-1", "protein_xref_oglcnac_atlas", "P82987", "O-GlcNAc Atlas" ], [ "P43243-1", "protein_xref_oglcnac_atlas", "P43243", "O-GlcNAc Atlas" ], [ "P16220-2", "protein_xref_oglcnac_atlas", "P16220", "O-GlcNAc Atlas" ], [ "O96008-1", "protein_xref_oglcnac_atlas", "O96008", "O-GlcNAc Atlas" ], [ "P55072-1", "protein_xref_oglcnac_atlas", "P55072", "O-GlcNAc Atlas" ] ] }, "readme": "Name\n - Human Xref O-GlcNAcAtlas\n\nVersion\n - v-2.0.3\n\nCreated on\n - \n\nModified on\n - \n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nUsability Domain\n - Human Xref O-GlcNAcAtlas dataset contains human (taxid: 9606) UniProtKB canonical accessions mapped to the O-GlcNAcAtlas accessions.\n\nDescription Domain\n Keywords\n - Xref\n - O-GlcNAc\n - O-GlcNAc Atlas\n\n Pipeline Steps\n - Step-1: The script maps the UniProtKB accesions to the O-GlcNAcAtlas Database accessions\n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: human_proteoform_glycosylation_sites_oglcnac_atlas.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_proteoform_glycosylation_sites_oglcnac_atlas.csv\n Output Subdomain\n Name: human_protein_xref_oglcnac_atlas.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_xref_oglcnac_atlas.csv\n Name: human_protein_xref_oglcnac_atlas.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_xref_oglcnac_atlas.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"3189\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"3189\"\n Name: \"xref_label\"\n Description: \"Label/Name associated with x-ref\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.0.3/reviewed/human_protein_xref_oglcnac_atlas.csv" }