{ "bcoid": "GLY_000716", "title": "Human O-Glucosylation Glycosylation Sites", "description": "The Human O-Gluc Glycosylation Sites contains human (taxid:9606) O-Glucosylation sites from OGLUT2 and ...", "filename": "human_proteoform_glycosylation_sites_o_gluc.csv", "filetype": "csv", "categories": { "species": "Homo sapiens", "molecule": "Proteoform", "tags": "O-Glucosylation Sites", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "O43897-1...", "596..." ], [ "O43897-1...", "751..." ] ], "headers": [ "uniprotkb_ca...", "glycosylatio..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "glycosylation_site_uniprotkb" }, { "type": "string", "label": "amino_acid" }, { "type": "string", "label": "saccharide" }, { "type": "string", "label": "glycosylation_type" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "glycosylation_subtype" }, { "type": "string", "label": "carb_name" }, { "type": "string", "label": "notes" }, { "type": "string", "label": "start_pos" }, { "type": "string", "label": "end_pos" }, { "type": "string", "label": "start_aa" }, { "type": "string", "label": "end_aa" }, { "type": "string", "label": "site_seq" } ], [ "O43897-1", "596", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "596", "596", "Ser", "Ser", "S" ], [ "O43897-1", "751", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "751", "751", "Ser", "Ser", "S" ], [ "O60494-1", "196", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "196", "196", "Ser", "Ser", "S" ], [ "O60494-1", "286", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "286", "286", "Ser", "Ser", "S" ], [ "O75095-1", "182", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "182", "182", "Ser", "Ser", "S" ], [ "O75095-1", "306", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "306", "306", "Ser", "Ser", "S" ], [ "P01133-1", "377", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "377", "377", "Ser", "Ser", "S" ], [ "P07225-1", "181", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "181", "181", "Ser", "Ser", "S" ], [ "P07911-1", "89", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "89", "89", "Ser", "Ser", "S" ], [ "P13497-1", "569", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "569", "569", "Ser", "Ser", "S" ], [ "P13497-1", "724", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "724", "724", "Ser", "Ser", "S" ], [ "P14543-1", "823", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "823", "823", "Ser", "Ser", "S" ], [ "P23142-1", "239", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "239", "239", "Ser", "Ser", "S" ], [ "P23142-1", "285", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "285", "285", "Ser", "Ser", "S" ], [ "P23142-1", "331", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "331", "331", "Ser", "Ser", "S" ], [ "P23142-1", "421", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "421", "421", "Ser", "Ser", "S" ], [ "P98095-1", "626", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "626", "626", "Ser", "Ser", "S" ], [ "P98095-1", "833", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "833", "833", "Ser", "Ser", "S" ], [ "P98095-1", "923", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "923", "923", "Ser", "Ser", "S" ], [ "P98095-1", "742", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "742", "742", "Ser", "Ser", "S" ], [ "P98095-1", "787", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "787", "787", "Ser", "Ser", "S" ], [ "Q12805-1", "234", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "234", "234", "Ser", "Ser", "S" ], [ "Q9UBX5-1", "227", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "227", "227", "Ser", "Ser", "S" ], [ "Q53RD9-1", "250", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "250", "250", "Ser", "Ser", "S" ], [ "Q53RD9-1", "293", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "293", "293", "Ser", "Ser", "S" ], [ "P35443-1", "400", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "400", "400", "Ser", "Ser", "S" ], [ "P35555-1", "268", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "268", "268", "Ser", "Ser", "S" ], [ "P35555-1", "471", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "471", "471", "Ser", "Ser", "S" ], [ "P35555-1", "510", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "510", "510", "Ser", "Ser", "S" ], [ "P35555-1", "552", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "552", "552", "Ser", "Ser", "S" ], [ "P35555-1", "593", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "593", "593", "Ser", "Ser", "S" ], [ "P35555-1", "634", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "634", "634", "Ser", "Ser", "S" ], [ "P35555-1", "787", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "787", "787", "Ser", "Ser", "S" ], [ "P35555-1", "827", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "827", "827", "Ser", "Ser", "S" ], [ "P35555-1", "932", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Insufficient data to confirm glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "932", "932", "Ser", "Ser", "S" ], [ "P35555-1", "1050", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "1050", "1050", "Ser", "Ser", "S" ], [ "P35555-1", "1135", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1135", "1135", "Ser", "Ser", "S" ], [ "P35555-1", "1218", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1218", "1218", "Ser", "Ser", "S" ], [ "P35555-1", "1302", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1302", "1302", "Ser", "Ser", "S" ], [ "P35555-1", "1345", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1345", "1345", "Ser", "Ser", "S" ], [ "P35555-1", "1386", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "1386", "1386", "Ser", "Ser", "S" ], [ "P35555-1", "1508", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1508", "1508", "Ser", "Ser", "S" ], [ "P35555-1", "1628", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry ~50%", "1628", "1628", "Ser", "Ser", "S" ], [ "P35555-1", "1830", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1830", "1830", "Ser", "Ser", "S" ], [ "P35555-1", "1871", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1871", "1871", "Ser", "Ser", "S" ], [ "P35555-1", "1911", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1911", "1911", "Ser", "Ser", "S" ], [ "P35555-1", "1953", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1953", "1953", "Ser", "Ser", "S" ], [ "P35555-1", "2035", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "2035", "2035", "Ser", "Ser", "S" ], [ "P35555-1", "2148", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "2148", "2148", "Ser", "Ser", "S" ], [ "P35555-1", "2227", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry <30%", "2227", "2227", "Ser", "Ser", "S" ], [ "P35555-1", "2313", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "2313", "2313", "Ser", "Ser", "S" ], [ "P35555-1", "2465", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "2465", "2465", "Ser", "Ser", "S" ], [ "P35555-1", "2547", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "2547", "2547", "Ser", "Ser", "S" ], [ "P35555-1", "2628", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry <30%", "2628", "2628", "Ser", "Ser", "S" ], [ "P35556-1", "298", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "298", "298", "Ser", "Ser", "S" ], [ "P35556-1", "340", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "340", "340", "Ser", "Ser", "S" ], [ "P35556-1", "516", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "516", "516", "Ser", "Ser", "S" ], [ "P35556-1", "555", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "555", "555", "Ser", "Ser", "S" ], [ "P35556-1", "597", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "597", "597", "Ser", "Ser", "S" ], [ "P35556-1", "638", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "638", "638", "Ser", "Ser", "S" ], [ "P35556-1", "679", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "679", "679", "Ser", "Ser", "S" ], [ "P35556-1", "832", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "832", "832", "Ser", "Ser", "S" ], [ "P35556-1", "872", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "872", "872", "Ser", "Ser", "S" ], [ "P35556-1", "977", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "977", "977", "Ser", "Ser", "S" ], [ "P35556-1", "1095", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "1095", "1095", "Ser", "Ser", "S" ], [ "P35556-1", "1137", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Insufficient data to confirm glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "1137", "1137", "Ser", "Ser", "S" ], [ "P35556-1", "1180", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1180", "1180", "Ser", "Ser", "S" ], [ "P35556-1", "1222", "Thr", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry <30%", "1222", "1222", "Thr", "Thr", "T" ], [ "P35556-1", "1263", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1263", "1263", "Ser", "Ser", "S" ], [ "P35556-1", "1347", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1347", "1347", "Ser", "Ser", "S" ], [ "P35556-1", "1390", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry ~50%", "1390", "1390", "Ser", "Ser", "S" ], [ "P35556-1", "1431", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Insufficient data to confirm glycosylation by enzyme POGLUT2 and POGLUT3. N-glycan upstream of POGLUT2 and 3 site may inhibit modification. glycosylation stoichiometry n/a", "1431", "1431", "Ser", "Ser", "S" ], [ "P35556-1", "1672", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry >70%", "1672", "1672", "Ser", "Ser", "S" ], [ "P35556-1", "1873", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "1873", "1873", "Ser", "Ser", "S" ], [ "P35556-1", "1951", "Thr", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "1951", "1951", "Thr", "Thr", "T" ], [ "P35556-1", "1996", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "1996", "1996", "Ser", "Ser", "S" ], [ "P35556-1", "2193", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "2193", "2193", "Ser", "Ser", "S" ], [ "P35556-1", "2274", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "2274", "2274", "Ser", "Ser", "S" ], [ "P35556-1", "2360", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "2360", "2360", "Ser", "Ser", "S" ], [ "P35556-1", "2471", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "2471", "2471", "Ser", "Ser", "S" ], [ "P35556-1", "2512", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "2512", "2512", "Ser", "Ser", "S" ], [ "P35556-1", "2594", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "2594", "2594", "Ser", "Ser", "S" ], [ "P35556-1", "2675", "Ser", "G71142DF", "O-linked", "protein_xref_pubmed", "34411563", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. glycosylation stoichiometry n/a", "2675", "2675", "Ser", "Ser", "S" ], [ "Q75N90-1", "511", "Ser", "G71142DF", "O-linked", "protein_xref_prosite_prorule", "PRU00076", "protein_xref_glygen_ds", "GLY_000704", "O-glucosylation", "Glc", "Predicted using consensus sequence C3-x-N-T-x-G-S-(FY)-x-C4. Glycosylation by enzyme POGLUT2 and POGLUT3. ", "511", "511", "Ser", "Ser", "S" ] ] }, "readme": "Name\n - Human O-Glucosylation Glycosylation Sites\n\nVersion\n - v-2.0.3\n\nCreated on\n - 2023-02-27T21:41:28.559Z\n\nModified on\n - 2023-03-03T02:07:18.965Z\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Robel Kahsay [rykahsay@gwu.edu]\n\nAuthors\n - Daniel Williamson [daniel.williamson25@uga.edu], Daniel Williamson [daniel.williamson25@uga.edu], Robert S Haltiwanger [rhalti@uga.edu]\n\nChecksum\n - \n\nUsability Domain\n - The Human O-Gluc Glycosylation Sites contains human (taxid:9606) O-Glucosylation sites from OGLUT2 and POGLUT3 O - glucosylate multiple EGF repeats in fibrillin - 1, -2, and LTBP1 and promote secretion of fibrillin - 1 [PMID:34411563] (experimental) and based on the consensus sequence the other sites (predicted) were detected using Prosite Prorule. The GlyTouCan ID for O-Gluc is G71142DF and the consensus sequence for O-gluc glycosylation is C3-x-N-T-x-G-S-(FY)-x-C4. The enzymes for o-glucosylation is POGLUT2 and POGLUT3. The dataset also contains Glycosylation stoichiometry: The relative amount (percentage) of a glycoform based on peptide signal intensity determined by mass spectrometry.\n - The dataset is generated in the lab of Robert S Haltiwanger by Daniel Williamson.\n\nDescription Domain\n Keywords\n - \n - O-Gluc\n - O-Glucosylation\n\n Pipeline Steps\n - Step-1: The script maps the UniProtKB accesions to the UniProtKB Canonical accessions and also checks the position and amino acid of O-Gluc modified residue against UniProtKB Canonical sequences.\n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-proteoform-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: human_proteoform_glycosylation_sites_o-gluc.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/compiled/human_proteoform_glycosylation_sites_o-gluc.csv\n Name: cellline_mapping.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/misc/cellline_mapping.csv\n Name: sample_mapping.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/misc/sample_mapping.csv\n Name: tissue_mapping.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/misc/tissue_mapping.csv\n Name: cellosaurus.txt\n URI: /data/shared/glyds/downloads/cellosaurus/2020-09-15/cellosaurus.txt\n Output Subdomain\n Name: human_proteoform_glycosylation_sites_o_gluc.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_proteoform_glycosylation_sites_o_gluc.csv\n Name: human_proteoform_glycosylation_sites_o_gluc.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_proteoform_glycosylation_sites_o_gluc.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"56\"\n Name: \"glycosylation_site_uniprotkb\"\n Description: \"Site on the protein sequence of the UniProtKB entry where glycosylation is observed\"\n Unique Values: \"179\"\n Name: \"amino_acid\"\n Description: \"Three letter abbreviation code of the amino acid\"\n Unique Values: \"2\"\n Name: \"saccharide\"\n Description: \"Sugar\"\n Unique Values: \"1\"\n Name: \"glycosylation_type\"\n Description: \"Type of glycosylation (N/O/C/S linked glycosylation)\"\n Unique Values: \"1\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"2\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"3\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"1\"\n Name: \"glycosylation_subtype\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"carb_name\"\n Description: \"carbohydrate name\"\n Unique Values: \"1\"\n Name: \"notes\"\n Description: \"Notes\"\n Unique Values: \"11\"\n Name: \"start_pos\"\n Description: \"Start position of the gene on the chromosome\"\n Unique Values: \"179\"\n Name: \"end_pos\"\n Description: \"End position of the gene on the chromosome\"\n Unique Values: \"179\"\n Name: \"start_aa\"\n Description: \"\"\n Unique Values: \"2\"\n Name: \"end_aa\"\n Description: \"\"\n Unique Values: \"2\"\n Name: \"site_seq\"\n Description: \"\"\n Unique Values: \"2\"", "downloadurl": "/ln2data/releases/data/v-2.0.3/reviewed/human_proteoform_glycosylation_sites_o_gluc.csv" }