{ "bcoid": "GLY_000628", "title": "SARS-CoV1 Glycosylation Sites (UniCarbKB)", "description": "This is a SARS-CoV1 Glycosylation Sites (UniCarbKB) dataset. It contains a list of SARS coronavirus (SARS-CoV-1) ...", "filename": "sarscov1_proteoform_glycosylation_sites_unicarbkb.csv", "filetype": "csv", "categories": { "status": "Reviewed", "molecule": "Proteoform", "species": "SARS coronavirus (SARS-CoV-1)", "tags": "UniCarbKB glycosylation sites", "file_type": "csv", "scope": "internal" }, "minitable": { "content": [ [ "P59594-1...", "214..." ], [ "P59594-1...", "214..." ] ], "headers": [ "uniprotkb_ca...", "glycosylatio..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "glycosylation_site_uniprotkb" }, { "type": "string", "label": "amino_acid" }, { "type": "string", "label": "saccharide" }, { "type": "string", "label": "glycosylation_type" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "start_pos" }, { "type": "string", "label": "end_pos" }, { "type": "string", "label": "start_aa" }, { "type": "string", "label": "end_aa" }, { "type": "string", "label": "site_seq" }, { "type": "string", "label": "site_type" }, { "type": "string", "label": "src_file_name" }, { "type": "string", "label": "uckb_id" }, { "type": "string", "label": "composition" }, { "type": "string", "label": "curation_notes" }, { "type": "string", "label": "additional_notes" }, { "type": "string", "label": "pdb" }, { "type": "string", "label": "swiss_model" }, { "type": "string", "label": "abundance" }, { "type": "string", "label": "source_tissue_id" }, { "type": "string", "label": "source_tissue_name" }, { "type": "string", "label": "source_cell_line_cellosaurus_id" }, { "type": "string", "label": "source_cell_line_cellosaurus_name" }, { "type": "string", "label": "n_sequon" }, { "type": "string", "label": "n_sequon_type" } ], [ "P59594-1", "214", "Asn", "", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G02815KT", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G02815KT", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G02815KT", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-LC", "The SN sample was sequentially digested by Lys-C and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G02815KT", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G02815KT", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G02815KT", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G41247ZX", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G31852PQ", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G62765YT", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "214", "Asn", "G80920RR", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "214", "214", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-T", "The SN sample was digested by trypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NTL", "other" ], [ "P59594-1", "65", "Asn", "G02815KT", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G02815KT", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G02815KT", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G02815KT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G41247ZX", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G41247ZX", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G41247ZX", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G31852PQ", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G31852PQ", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G31852PQ", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G62765YT", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G62765YT", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G62765YT", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G80920RR", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G80920RR", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G80920RR", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G80920RR", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G92050GC", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G92050GC", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G92050GC", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G92050GC", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "65", "Asn", "G92050GC", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "65", "65", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G92050GC", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NVT", "NXT" ], [ "P59594-1", "73", "Asn", "G31852PQ", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "73", "Asn", "G31852PQ", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "73", "Asn", "G31852PQ", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "73", "Asn", "G62765YT", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "73", "Asn", "G62765YT", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "73", "Asn", "G62765YT", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G62765YT", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "73", "Asn", "", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "73", "Asn", "", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "73", "Asn", "", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "73", "73", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NHT", "NXT" ], [ "P59594-1", "158", "Asn", "G41247ZX", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "158", "158", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NCT", "NXT" ], [ "P59594-1", "158", "Asn", "G41247ZX", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "158", "158", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NCT", "NXT" ], [ "P59594-1", "158", "Asn", "G41247ZX", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "158", "158", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NCT", "NXT" ], [ "P59594-1", "227", "Asn", "G41247ZX", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "227", "227", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NIT", "NXT" ], [ "P59594-1", "227", "Asn", "G41247ZX", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "227", "227", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NIT", "NXT" ], [ "P59594-1", "227", "Asn", "G41247ZX", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "227", "227", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G41247ZX", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NIT", "NXT" ], [ "P59594-1", "227", "Asn", "G31852PQ", "N-linked", "protein_xref_unicarbkb", "P59594", "protein_xref_unicarbkb", "P59594", "227", "227", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NIT", "NXT" ], [ "P59594-1", "227", "Asn", "G31852PQ", "N-linked", "protein_xref_pubmed", "33064451", "protein_xref_unicarbkb", "P59594", "227", "227", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NIT", "NXT" ], [ "P59594-1", "227", "Asn", "G31852PQ", "N-linked", "protein_xref_doi", "10.1021/acs.analchem.0c03301", "protein_xref_unicarbkb", "P59594", "227", "227", "Asn", "Asn", "N", "known_site", "known_33064451_glygen", "G31852PQ", "", "SN-AC", "The SN sample was sequentially digested by Asp-N and chymotrypsin.Mass spectrometric data acquisition was performed using a signature ion-triggered EThcD method. MS/MS data were processed using PMiByonic (version 3.7) and PMi-Byologic (version 3.7, Protein Metrics, Inc.). Data were searched using the Protein Metrics 182 human N-glycan library (for proteins expressed in HEK cells) or 38 insect N-glycan library (for proteins expressed in insect cells)", "", "", "", "", "", "", "", "NIT", "NXT" ] ] }, "readme": "Name\n - SARS-CoV1 Glycosylation Sites (UniCarbKB)\n\nVersion\n - v-2.0.3\n\nCreated on\n - 2022-03-31T15:05:49.377202\n\nModified on\n - 2022-09-26T09:08:12.642745\n\nCreated by\n - Karina Martinez [karinamartinez@gwu.edu], Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@email.gwu.edu]\n\nAuthors\n - Matthew Campbell [m.campbell2@griffith.edu.au]\n\nChecksum\n - \n\nUsability Domain\n - This is a SARS-CoV1 Glycosylation Sites (UniCarbKB) dataset. It contains a list of SARS coronavirus (SARS-CoV-1) [taxonomy:694009] proteins with information on glycosylation sites and associated glycans (if available) from UniCarbKB. The listed proteins (UniProtKB accession) are part of the GlyGen UniProtKB SARS CoV1 Proteome Masterlist (https://data.glygen.org/GLY_000467). If you use this dataset, please provide proper attribution to UniCarbKB, EMBL-EBI-UniProtKB, and GlyGen. Cite: PMID:24234447, PMID:33237286, and PMID:31616925. This dataset can be used for obtaining a list of glycosylation sites for canonical glycoproteins from the UnicarbKB database.\n\nDescription Domain\n Keywords\n - proteins\n - canonical\n - glycosylation sites\n - glycan\n - UniCarbKB\n - GlyTouCan\n\n Pipeline Steps\n - Step-1: \n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-proteoform-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: cellline_mapping.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/misc/cellline_mapping.csv\n Name: n_sequon_info.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/misc/n_sequon_info.csv\n Name: sample_mapping.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/misc/sample_mapping.csv\n Name: tissue_mapping.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/misc/tissue_mapping.csv\n Name: cellosaurus.txt\n URI: /data/shared/glyds/downloads/cellosaurus/2020-09-15/cellosaurus.txt\n Name: fuzzy_legacy_cph_start_end_positions.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/fuzzy_legacy_cph_start_end_positions.csv\n Name: fuzzy_legacy_human_proteoform_glycosylation_sites_unicarbkb_qin_isoforms.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/fuzzy_legacy_human_proteoform_glycosylation_sites_unicarbkb_qin_isoforms.csv\n Name: fuzzy_legacy_qin_oglanac.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/fuzzy_legacy_qin_oglanac.csv\n Name: fuzzy_simplecell_all_glygen_qc.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/fuzzy_simplecell_all_glygen_qc.csv\n Name: known_33064451_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_33064451_glygen.csv\n Name: known_33167210_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_33167210_glygen.csv\n Name: known_33806155_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_33806155_glygen.csv\n Name: known_34004174_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_34004174_glygen.csv\n Name: known_34106099_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_34106099_glygen.csv\n Name: known_legacy_cph_single_positions.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_legacy_cph_single_positions.csv\n Name: known_legacy_dbogap_dbogap2_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_legacy_dbogap_dbogap2_glygen.csv\n Name: known_legacy_human_mouse_rat_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_legacy_human_mouse_rat_glygen.csv\n Name: known_legacy_larsson_xyl.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_legacy_larsson_xyl.csv\n Name: known_legacy_reis_gastric_ags.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_legacy_reis_gastric_ags.csv\n Name: known_legacy_sarscov2_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_legacy_sarscov2_glygen.csv\n Name: known_unicarbkb_glycomics_study.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/known_unicarbkb_glycomics_study.csv\n Name: mixed_34089345_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/mixed_34089345_glygen.csv\n Name: unknown_20131323_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/unknown_20131323_glygen.csv\n Name: unknown_33993882_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/unknown_33993882_glygen.csv\n Name: unknown_34083726_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/unknown_34083726_glygen.csv\n Name: unknown_34191522_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/unknown_34191522_glygen.csv\n Name: unknown_34327564_glygen.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/unknown_34327564_glygen.csv\n Name: unknown_legacy_human_proteoform_glycosylation_sites_unicarbkb_ogalnac_data.csv\n URI: /data/shared/glyds/downloads/unicarbkb/01_11_2022/unknown_legacy_human_proteoform_glycosylation_sites_unicarbkb_ogalnac_data.csv\n Output Subdomain\n Name: sarscov1_proteoform_glycosylation_sites_unicarbkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/sarscov1_proteoform_glycosylation_sites_unicarbkb.csv\n Name: sarscov1_proteoform_glycosylation_sites_unicarbkb.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/sarscov1_proteoform_glycosylation_sites_unicarbkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"glycosylation_site_uniprotkb\"\n Description: \"Site on the protein sequence of the UniProtKB entry where glycosylation is observed\"\n Unique Values: \"13\"\n Name: \"amino_acid\"\n Description: \"Three letter abbreviation code of the amino acid\"\n Unique Values: \"1\"\n Name: \"saccharide\"\n Description: \"Sugar\"\n Unique Values: \"9\"\n Name: \"glycosylation_type\"\n Description: \"Type of glycosylation (N/O/C/S linked glycosylation)\"\n Unique Values: \"1\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"3\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"3\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"1\"\n Name: \"start_pos\"\n Description: \"Start position of the gene on the chromosome\"\n Unique Values: \"13\"\n Name: \"end_pos\"\n Description: \"End position of the gene on the chromosome\"\n Unique Values: \"13\"\n Name: \"start_aa\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"end_aa\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"site_seq\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"site_type\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"src_file_name\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"uckb_id\"\n Description: \"\"\n Unique Values: \"9\"\n Name: \"composition\"\n Description: \"Composition of glycan\"\n Unique Values: \"1\"\n Name: \"curation_notes\"\n Description: \"GlycoSuiteDB curation notes\"\n Unique Values: \"3\"\n Name: \"additional_notes\"\n Description: \"\"\n Unique Values: \"3\"\n Name: \"pdb\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"swiss_model\"\n Description: \"SWISS-MODEL ID.\"\n Unique Values: \"1\"\n Name: \"abundance\"\n Description: \" Abundance ratio of the glycan.\"\n Unique Values: \"1\"\n Name: \"source_tissue_id\"\n Description: \"Tissue ID from GlyConnect\"\n Unique Values: \"1\"\n Name: \"source_tissue_name\"\n Description: \"Tissue NAME from GlyConnect\"\n Unique Values: \"1\"\n Name: \"source_cell_line_cellosaurus_id\"\n Description: \"cellosaurus ID of the cell line\"\n Unique Values: \"1\"\n Name: \"source_cell_line_cellosaurus_name\"\n Description: \"\"\n Unique Values: \"1\"\n Name: \"n_sequon\"\n Description: \"\"\n Unique Values: \"12\"\n Name: \"n_sequon_type\"\n Description: \"\"\n Unique Values: \"3\"", "downloadurl": "/ln2data/releases/data/v-2.0.3/reviewed/sarscov1_proteoform_glycosylation_sites_unicarbkb.csv" }