{ "bcoid": "GLY_000561", "title": "Mouse Proteoform Glycosylation Citations (UniProtKB)", "description": "", "filename": "mouse_proteoform_citations_glycosylation_sites_uniprotkb.csv", "filetype": "csv", "categories": { "status": "Reviewed" }, "minitable": { "content": [ [ "Q9ES57-1...", "Structures o..." ], [ "P28665-1...", "Enhanced ana..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "glytoucan_ac" } ], [ "Q9ES57-1", "Structures of CD200/CD200 receptor family and implications for topology, regulation, and evolution.", "Structure (London, England : 1993)", "2013 May 7", "Hatherley D, Lea SM, Johnson S, Barclay AN", "protein_xref_pubmed", "23602662", "protein_xref_uniprotkb_gly", "Q9ES57", "" ], [ "P28665-1", "Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides.", "Journal of proteome research", "2007 Mar", "Bernhard OK, Kapp EA, Simpson RJ", "protein_xref_pubmed", "17330941", "protein_xref_uniprotkb_gly", "P28665", "" ], [ "P06802-1", "Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.", "Proceedings of the National Academy of Sciences of the United States of America", "2012 Oct 16", "Kato K, Nishimasu H, Okudaira S, Mihara E, Ishitani R, Takagi J, Aoki J, Nureki O", "protein_xref_pubmed", "23027977", "protein_xref_uniprotkb_gly", "P06802", "" ], [ "P06802-1", "Structure of NPP1, an ectonucleotide pyrophosphatase/phosphodiesterase involved in tissue calcification.", "Structure (London, England : 1993)", "2012 Nov 7", "Jansen S, Perrakis A, Ulens C, Winkler C, Andries M, Joosten RP, Van Acker M, Luyten FP, Moolenaar WH, Bollen M", "protein_xref_pubmed", "23041369", "protein_xref_uniprotkb_gly", "P06802", "" ], [ "O70458-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "O70458", "" ], [ "P52800-1", "Crystal structure of an ephrin ectodomain.", "Developmental cell", "2001 Jul", "Toth J, Cutforth T, Gelinas AD, Bethoney KA, Bard J, Harrison CJ", "protein_xref_pubmed", "11703926", "protein_xref_uniprotkb_gly", "P52800", "" ], [ "Q62192-1", "Crystal structures of mouse and human RP105/MD-1 complexes reveal unique dimer organization of the toll-like receptor family.", "Journal of molecular biology", "2011 Nov 4", "Ohto U, Miyake K, Shimizu T", "protein_xref_pubmed", "21959264", "protein_xref_uniprotkb_gly", "Q62192", "" ], [ "Q01705-1", "Deciphering the Fringe-Mediated Notch Code: Identification of Activating and Inhibiting Sites Allowing Discrimination between Ligands.", "Developmental cell", "2017 Jan 23", "Kakuda S, Haltiwanger RS", "protein_xref_pubmed", "28089369", "protein_xref_uniprotkb_gly", "Q01705", "" ], [ "Q01705-1", "O-glucose trisaccharide is present at high but variable stoichiometry at multiple sites on mouse Notch1.", "The Journal of biological chemistry", "2011 Sep 9", "Rana NA, Nita-Lazar A, Takeuchi H, Kakuda S, Luther KB, Haltiwanger RS", "protein_xref_pubmed", "21757702", "protein_xref_uniprotkb_gly", "Q01705", "" ], [ "P11688-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "P11688", "" ], [ "Q9QUN7-1", "Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide.", "Cell", "2007 Sep 21", "Jin MS, Kim SE, Heo JY, Lee ME, Kim HM, Paik SG, Lee H, Lee JO", "protein_xref_pubmed", "17889651", "protein_xref_uniprotkb_gly", "Q9QUN7", "" ], [ "Q9QUN7-1", "Recognition of lipopeptide patterns by Toll-like receptor 2-Toll-like receptor 6 heterodimer.", "Immunity", "2009 Dec 18", "Kang JY, Nan X, Jin MS, Youn SJ, Ryu YH, Mah S, Han SH, Lee H, Paik SG, Lee JO", "protein_xref_pubmed", "19931471", "protein_xref_uniprotkb_gly", "Q9QUN7", "" ], [ "Q9QUN7-1", "Structural basis for inhibition of TLR2 by staphylococcal superantigen-like protein 3 (SSL3).", "Proceedings of the National Academy of Sciences of the United States of America", "2015 Sep 1", "Koymans KJ, Feitsma LJ, Brondijk TH, Aerts PC, Lukkien E, Lossl P, van Kessel KP, de Haas CJ, van Strijp JA, Huizinga EG", "protein_xref_pubmed", "26283364", "protein_xref_uniprotkb_gly", "Q9QUN7", "" ], [ "P97290-1", "Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides.", "Journal of proteome research", "2007 Mar", "Bernhard OK, Kapp EA, Simpson RJ", "protein_xref_pubmed", "17330941", "protein_xref_uniprotkb_gly", "P97290", "" ], [ "P97290-1", "Proteome-wide characterization of N-glycosylation events by diagonal chromatography.", "Journal of proteome research", "2006 Sep", "Ghesquiere B, Van Damme J, Martens L, Vandekerckhove J, Gevaert K", "protein_xref_pubmed", "16944957", "protein_xref_uniprotkb_gly", "P97290", "" ], [ "Q6DYE8-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q6DYE8", "" ], [ "Q8CG16-1", "Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides.", "Journal of proteome research", "2007 Mar", "Bernhard OK, Kapp EA, Simpson RJ", "protein_xref_pubmed", "17330941", "protein_xref_uniprotkb_gly", "Q8CG16", "" ], [ "Q60751-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q60751", "" ], [ "P40237-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "P40237", "" ], [ "Q8BGC9-1", "Identification and characterization of novel members of the CREG family, putative secreted glycoproteins expressed specifically in brain.", "Genomics", "2002 Nov", "Kunita R, Otomo A, Ikeda JE", "protein_xref_pubmed", "12408961", "protein_xref_uniprotkb_gly", "Q8BGC9", "" ], [ "A6X935-1", "Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides.", "Journal of proteome research", "2007 Mar", "Bernhard OK, Kapp EA, Simpson RJ", "protein_xref_pubmed", "17330941", "protein_xref_uniprotkb_gly", "A6X935", "" ], [ "A6X935-1", "Proteome-wide characterization of N-glycosylation events by diagonal chromatography.", "Journal of proteome research", "2006 Sep", "Ghesquiere B, Van Damme J, Martens L, Vandekerckhove J, Gevaert K", "protein_xref_pubmed", "16944957", "protein_xref_uniprotkb_gly", "A6X935", "" ], [ "Q01339-1", "Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides.", "Journal of proteome research", "2007 Mar", "Bernhard OK, Kapp EA, Simpson RJ", "protein_xref_pubmed", "17330941", "protein_xref_uniprotkb_gly", "Q01339", "" ], [ "Q01339-1", "Proteome-wide characterization of N-glycosylation events by diagonal chromatography.", "Journal of proteome research", "2006 Sep", "Ghesquiere B, Van Damme J, Martens L, Vandekerckhove J, Gevaert K", "protein_xref_pubmed", "16944957", "protein_xref_uniprotkb_gly", "Q01339", "" ], [ "O35598-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "O35598", "" ], [ "Q04519-1", "Crystal structure of mammalian acid sphingomyelinase.", "Nature communications", "2016 Jul 20", "Gorelik A, Illes K, Heinz LX, Superti-Furga G, Nagar B", "protein_xref_pubmed", "27435900", "protein_xref_uniprotkb_gly", "Q04519", "" ], [ "Q08481-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q08481", "" ], [ "P21995-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P21995", "" ], [ "P11499-1", "Mapping of O-GlcNAc sites of 20 S proteasome subunits and Hsp90 by a novel biotin-cystamine tag.", "Molecular & cellular proteomics : MCP", "2012 Aug", "Overath T, Kuckelkorn U, Henklein P, Strehl B, Bonar D, Kloss A, Siele D, Kloetzel PM, Janek K", "protein_xref_pubmed", "22556278", "protein_xref_uniprotkb_gly", "P11499", "" ], [ "Q8C0X7-1", "Structure of a mammalian sperm cation channel complex.", "Nature", "2021 Jul", "Lin S, Ke M, Zhang Y, Yan Z, Wu J", "protein_xref_pubmed", "34225353", "protein_xref_uniprotkb_gly", "Q8C0X7", "" ], [ "P18242-1", "High throughput quantitative glycomics and glycoform-focused proteomics of murine dermis and epidermis.", "Molecular & cellular proteomics : MCP", "2005 Dec", "Uematsu R, Furukawa J, Nakagawa H, Shinohara Y, Deguchi K, Monde K, Nishimura S", "protein_xref_pubmed", "16170054", "protein_xref_uniprotkb_gly", "P18242", "" ], [ "Q8K2I4-1", "The structure of mammalian beta-mannosidase provides insight into beta-mannosidosis and nystagmus.", "The FEBS journal", "2019 Apr", "Gytz H, Liang J, Liang Y, Gorelik A, Illes K, Nagar B", "protein_xref_pubmed", "30552791", "protein_xref_uniprotkb_gly", "Q8K2I4", "" ], [ "Q3TCN2-1", "Molecular characterization of the hypothetical 66.3-kDa protein in mouse: lysosomal targeting, glycosylation, processing and tissue distribution.", "FEBS letters", "2006 Oct 16", "Deuschl F, Kollmann K, von Figura K, Lubke T", "protein_xref_pubmed", "17007843", "protein_xref_uniprotkb_gly", "Q3TCN2", "" ], [ "Q3TCN2-1", "De novo sulfur SAD phasing of the lysosomal 66.3 kDa protein from mouse.", "Acta crystallographica. Section D, Biological crystallography", "2009 Mar", "Lakomek K, Dickmanns A, Mueller U, Kollmann K, Deuschl F, Berndt A, Lubke T, Ficner R", "protein_xref_pubmed", "19237744", "protein_xref_uniprotkb_gly", "Q3TCN2", "" ], [ "Q64726-1", "Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides.", "Journal of proteome research", "2007 Mar", "Bernhard OK, Kapp EA, Simpson RJ", "protein_xref_pubmed", "17330941", "protein_xref_uniprotkb_gly", "Q64726", "" ], [ "Q6PEM8-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q6PEM8", "" ], [ "Q64455-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q64455", "" ], [ "Q8R5M8-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q8R5M8", "" ], [ "Q8R5M8-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "Q8R5M8", "" ], [ "Q8R5M8-1", "N-glycosylation at the SynCAM (synaptic cell adhesion molecule) immunoglobulin interface modulates synaptic adhesion.", "The Journal of biological chemistry", "2010 Nov 5", "Fogel AI, Li Y, Giza J, Wang Q, Lam TT, Modis Y, Biederer T", "protein_xref_pubmed", "20739279", "protein_xref_uniprotkb_gly", "Q8R5M8", "" ], [ "P13595-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P13595", "" ], [ "P13595-1", "Identification of N-glycosylation sites of the murine neural cell adhesion molecule NCAM by MALDI-TOF and MALDI-FTICR mass spectrometry.", "Analytical and bioanalytical chemistry", "2004 Feb", "Albach C, Damoc E, Denzinger T, Schachner M, Przybylski M, Schmitz B", "protein_xref_pubmed", "14658030", "protein_xref_uniprotkb_gly", "P13595", "" ], [ "P13595-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "P13595", "" ], [ "P56695-1", "Endoplasmic reticulum stress and N-glycosylation modulate expression of WFS1 protein.", "Biochemical and biophysical research communications", "2004 Dec 3", "Yamaguchi S, Ishihara H, Tamura A, Yamada T, Takahashi R, Takei D, Katagiri H, Oka Y", "protein_xref_pubmed", "15522226", "protein_xref_uniprotkb_gly", "P56695", "" ], [ "P59384-1", "Biosynthesis and expression of a disintegrin-like and metalloproteinase domain with thrombospondin-1 repeats-15: a novel versican-cleaving proteoglycanase.", "The Journal of biological chemistry", "2013 Dec 27", "Dancevic CM, Fraser FW, Smith AD, Stupka N, Ward AC, McCulloch DR", "protein_xref_pubmed", "24220035", "protein_xref_uniprotkb_gly", "P59384", "" ], [ "P49582-1", "NACHO Engages N-Glycosylation ER Chaperone Pathways for alpha7 Nicotinic Receptor Assembly.", "Cell reports", "2020 Aug 11", "Kweon HJ, Gu S, Witham E, Dhara M, Yu H, Mandon ED, Jawhari A, Bredt DS", "protein_xref_pubmed", "32783947", "protein_xref_uniprotkb_gly", "P49582", "" ], [ "Q07113-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q07113", "" ], [ "Q60928-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q60928", "" ], [ "Q3UDW8-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q3UDW8", "" ], [ "Q99MR3-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q99MR3", "" ], [ "Q8BWU1-1", "The CNS glycoprotein Shadoo has PrP(C)-like protective properties and displays reduced levels in prion infections.", "The EMBO journal", "2007 Sep 5", "Watts JC, Drisaldi B, Ng V, Yang J, Strome B, Horne P, Sy MS, Yoong L, Young R, Mastrangelo P, Bergeron C, Fraser PE, Carlson GA, Mount HT, Schmitt-Ulms G, Westaway D", "protein_xref_pubmed", "17703189", "protein_xref_uniprotkb_gly", "Q8BWU1", "" ], [ "Q60841-1", "Structure of a receptor-binding fragment of reelin and mutational analysis reveal a recognition mechanism similar to endocytic receptors.", "Proceedings of the National Academy of Sciences of the United States of America", "2007 Jun 12", "Yasui N, Nogi T, Kitao T, Nakano Y, Hattori M, Takagi J", "protein_xref_pubmed", "17548821", "protein_xref_uniprotkb_gly", "Q60841", "" ], [ "Q99J21-1", "Cryo-EM structures of the mammalian endo-lysosomal TRPML1 channel elucidate the combined regulation mechanism.", "Protein & cell", "2017 Nov", "Zhang S, Li N, Zeng W, Gao N, Yang M", "protein_xref_pubmed", "28936784", "protein_xref_uniprotkb_gly", "Q99J21", "" ], [ "Q99J21-1", "Structure of mammalian endolysosomal TRPML1 channel in nanodiscs.", "Nature", "2017 Oct 19", "Chen Q, She J, Zeng W, Guo J, Xu H, Bai XC, Jiang Y", "protein_xref_pubmed", "29019981", "protein_xref_uniprotkb_gly", "Q99J21", "" ], [ "Q8BKG3-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q8BKG3", "" ], [ "E9Q9F6-1", "Structure of a mammalian sperm cation channel complex.", "Nature", "2021 Jul", "Lin S, Ke M, Zhang Y, Yan Z, Wu J", "protein_xref_pubmed", "34225353", "protein_xref_uniprotkb_gly", "E9Q9F6", "" ], [ "P19137-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P19137", "" ], [ "Q9Z1M0-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q9Z1M0", "" ], [ "Q8VC69-1", "Role of glycosylation in the organic anion transporter OAT1.", "The Journal of biological chemistry", "2004 Apr 9", "Tanaka K, Xu W, Zhou F, You G", "protein_xref_pubmed", "14749323", "protein_xref_uniprotkb_gly", "Q8VC69", "" ], [ "Q9QWK4-1", "Modification of N-glycosylation modulates the secretion and lipolytic function of apoptosis inhibitor of macrophage (AIM).", "FEBS letters", "2012 Oct 19", "Mori M, Kimura H, Iwamura Y, Arai S, Miyazaki T", "protein_xref_pubmed", "23236605", "protein_xref_uniprotkb_gly", "Q9QWK4", "" ], [ "O70362-1", "Proteome-wide characterization of N-glycosylation events by diagonal chromatography.", "Journal of proteome research", "2006 Sep", "Ghesquiere B, Van Damme J, Martens L, Vandekerckhove J, Gevaert K", "protein_xref_pubmed", "16944957", "protein_xref_uniprotkb_gly", "O70362", "" ], [ "P43406-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "P43406", "" ], [ "Q9R0E1-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q9R0E1", "" ], [ "Q8BGN3-1", "Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase.", "Scientific reports", "2016 Feb 18", "Morita J, Kano K, Kato K, Takita H, Sakagami H, Yamamoto Y, Mihara E, Ueda H, Sato T, Tokuyama H, Arai H, Asou H, Takagi J, Ishitani R, Nishimasu H, Nureki O, Aoki J", "protein_xref_pubmed", "26888014", "protein_xref_uniprotkb_gly", "Q8BGN3", "" ], [ "Q8BWC0-1", "The two-pore channel TPCN2 mediates NAADP-dependent Ca(2+)-release from lysosomal stores.", "Pflugers Archiv : European journal of physiology", "2009 Sep", "Zong X, Schieder M, Cuny H, Fenske S, Gruner C, Rotzer K, Griesbeck O, Harz H, Biel M, Wahl-Schott C", "protein_xref_pubmed", "19557428", "protein_xref_uniprotkb_gly", "Q8BWC0", "" ], [ "Q9WV91-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q9WV91", "" ], [ "Q9WV91-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "Q9WV91", "" ], [ "P97449-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "P97449", "" ], [ "O35298-1", "Crystal structure of the mammalian lipopolysaccharide detoxifier.", "Proceedings of the National Academy of Sciences of the United States of America", "2018 Jan 30", "Gorelik A, Illes K, Nagar B", "protein_xref_pubmed", "29343645", "protein_xref_uniprotkb_gly", "O35298", "" ], [ "Q3TDQ1-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q3TDQ1", "" ], [ "O70255-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "O70255", "" ], [ "A2A259-1", "Cryo-EM structure of the polycystic kidney disease-like channel PKD2L1.", "Nature communications", "2018 Mar 22", "Su Q, Hu F, Liu Y, Ge X, Mei C, Yu S, Shen A, Zhou Q, Yan C, Lei J, Zhang Y, Liu X, Wang T", "protein_xref_pubmed", "29567962", "protein_xref_uniprotkb_gly", "A2A259", "" ], [ "P33587-1", "Proteome-wide characterization of N-glycosylation events by diagonal chromatography.", "Journal of proteome research", "2006 Sep", "Ghesquiere B, Van Damme J, Martens L, Vandekerckhove J, Gevaert K", "protein_xref_pubmed", "16944957", "protein_xref_uniprotkb_gly", "P33587", "" ], [ "P13597-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P13597", "" ], [ "P41233-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P41233", "" ], [ "Q8R2Y2-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q8R2Y2", "" ], [ "A2ARV4-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "A2ARV4", "" ], [ "P20239-1", "Structural characterization of native mouse zona pellucida proteins using mass spectrometry.", "The Journal of biological chemistry", "2003 Sep 5", "Boja ES, Hoodbhoy T, Fales HM, Dean J", "protein_xref_pubmed", "12799386", "protein_xref_uniprotkb_gly", "P20239", "" ], [ "Q9D1N2-1", "Glycosylation of Asn-76 in mouse GPIHBP1 is critical for its appearance on the cell surface and the binding of chylomicrons and lipoprotein lipase.", "Journal of lipid research", "2008 Jun", "Beigneux AP, Gin P, Davies BS, Weinstein MM, Bensadoun A, Ryan RO, Fong LG, Young SG", "protein_xref_pubmed", "18340083", "protein_xref_uniprotkb_gly", "Q9D1N2", "" ], [ "P10493-1", "Structure and localization of O- and N-linked oligosaccharide chains on basement membrane protein nidogen.", "Matrix (Stuttgart, Germany)", "1993 May", "Fujiwara S, Shinkai H, Mann K, Timpl R", "protein_xref_pubmed", "8326911", "protein_xref_uniprotkb_gly", "P10493", "" ], [ "Q9R1P4-1", "Mapping of O-GlcNAc sites of 20 S proteasome subunits and Hsp90 by a novel biotin-cystamine tag.", "Molecular & cellular proteomics : MCP", "2012 Aug", "Overath T, Kuckelkorn U, Henklein P, Strehl B, Bonar D, Kloss A, Siele D, Kloetzel PM, Janek K", "protein_xref_pubmed", "22556278", "protein_xref_uniprotkb_gly", "Q9R1P4", "" ], [ "Q9JLB4-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q9JLB4", "" ], [ "P58242-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P58242", "" ], [ "P58242-1", "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "Molecular & cellular proteomics : MCP", "2009 Nov", "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "protein_xref_pubmed", "19656770", "protein_xref_uniprotkb_gly", "P58242", "" ] ] }, "readme": "Name\n - Mouse Proteoform Glycosylation Citations (UniProtKB)\n\nVersion\n - v-2.0.3\n\nCreated on\n - 2021-06-03T16:33:45.288361\n\nModified on\n - 2023-03-14T16:53:05.178Z\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n - Not Applicable []\n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: mouse_proteoform_glycosylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/mouse_proteoform_glycosylation_sites_uniprotkb.csv\n Output Subdomain\n Name: mouse_proteoform_citations_glycosylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/mouse_proteoform_citations_glycosylation_sites_uniprotkb.csv\n Name: mouse_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/mouse_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"492\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"208\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"71\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"197\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"208\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"208\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"495\"\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.0.3/reviewed/mouse_proteoform_citations_glycosylation_sites_uniprotkb.csv" }