{ "bcoid": "GLY_000560", "title": "Human Proteoform Glycosylation Citations (UniProtKB)", "description": "", "filename": "human_proteoform_citations_glycosylation_sites_uniprotkb.csv", "filetype": "csv", "categories": { "species": "Homo sapiens", "molecule": "Proteoform", "tags": "Protein Citations UniProtKB", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "P04921-1...", "N-terminal a..." ], [ "Q15910-1...", "O-GlcNAcylat..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "glytoucan_ac" } ], [ "P04921-1", "N-terminal amino acid sequence of sialoglycoprotein D (glycophorin C) from human erythrocyte membranes.", "European journal of biochemistry", "1982 Jun 15", "Dahr W, Beyreuther K, Kordowicz M, Kruger J", "protein_xref_pubmed", "7106126", "protein_xref_uniprotkb_gly", "P04921", "" ], [ "Q15910-1", "O-GlcNAcylation regulates EZH2 protein stability and function.", "Proceedings of the National Academy of Sciences of the United States of America", "2014 Jan 28", "Chu CS, Lo PW, Yeh YH, Hsu PH, Peng SH, Teng YC, Kang ML, Wong CH, Juan LJ", "protein_xref_pubmed", "24474760", "protein_xref_uniprotkb_gly", "Q15910", "" ], [ "Q95460-1", "Biochemical features of the MHC-related protein 1 consistent with an immunological function.", "Journal of immunology (Baltimore, Md. : 1950)", "2003 Jun 15", "Miley MJ, Truscott SM, Yu YY, Gilfillan S, Fremont DH, Hansen TH, Lybarger L", "protein_xref_pubmed", "12794138", "protein_xref_uniprotkb_gly", "Q95460", "" ], [ "Q5T6X5-1", "N-glycosylation and disulfide bonding affects GPRC6A receptor expression, function, and dimerization.", "FEBS letters", "2015 Feb 27", "Norskov-Lauritsen L, Jorgensen S, Brauner-Osborne H", "protein_xref_pubmed", "25617829", "protein_xref_uniprotkb_gly", "Q5T6X5", "" ], [ "Q13740-1", "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.", "Journal of proteome research", "2009 Feb", "Chen R, Jiang X, Sun D, Han G, Wang F, Ye M, Wang L, Zou H", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "Q13740", "" ], [ "Q13740-1", "Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry.", "Nature biotechnology", "2003 Jun", "Zhang H, Li XJ, Martin DB, Aebersold R", "protein_xref_pubmed", "12754519", "protein_xref_uniprotkb_gly", "Q13740", "" ], [ "O00469-1", "Glycoproteomics 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quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry.", "Nature biotechnology", "2003 Jun", "Zhang H, Li XJ, Martin DB, Aebersold R", "protein_xref_pubmed", "12754519", "protein_xref_uniprotkb_gly", "P29622", "" ], [ "P10253-1", "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.", "Journal of proteome research", "2009 Feb", "Chen R, Jiang X, Sun D, Han G, Wang F, Ye M, Wang L, Zou H", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "P10253", "" ], [ "P10253-1", "Human lysosomal alpha-glucosidase: functional characterization of the glycosylation sites.", "The Biochemical journal", "1993 Feb 1", "Hermans MM, Wisselaar HA, Kroos MA, Oostra BA, Reuser AJ", "protein_xref_pubmed", "8435067", "protein_xref_uniprotkb_gly", "P10253", "" ], [ "P10253-1", "Structure of human lysosomal acid alpha-glucosidase-a guide for the treatment of Pompe disease.", 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chemistry.", "Journal of proteome research", "2009 Feb", "Chen R, Jiang X, Sun D, Han G, Wang F, Ye M, Wang L, Zou H", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "Q9UKX5", "" ], [ "P04216-1", "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.", "Nature biotechnology", "2009 Apr", "Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P04216", "" ], [ "P04216-1", "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.", "Journal of proteome research", "2009 Feb", "Chen R, Jiang X, Sun D, Han G, Wang F, Ye M, Wang L, Zou H", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "P04216", "" ], [ "P05164-1", "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.", "Journal of 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Schiess R, Aebersold R, Watts JD", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "P27701", "" ], [ "P27701-1", "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.", "Journal of proteome research", "2009 Feb", "Chen R, Jiang X, Sun D, Han G, Wang F, Ye M, Wang L, Zou H", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "P27701", "" ], [ "P13224-1", "Quaternary organization of GPIb-IX complex and insights into Bernard-Soulier syndrome revealed by the structures of GPIbbeta and a GPIbbeta/GPIX chimera.", "Blood", "2011 Nov 10", "McEwan PA, Yang W, Carr KH, Mo X, Zheng X, Li R, Emsley J", "protein_xref_pubmed", "21908432", "protein_xref_uniprotkb_gly", "P13224", "" ], [ "P13224-1", "The alpha and beta chains of human platelet glycoprotein Ib are both transmembrane proteins containing a leucine-rich amino acid sequence.", "Proceedings of the National Academy of Sciences of the United States 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Osada H", "protein_xref_pubmed", "14573609", "protein_xref_uniprotkb_gly", "Q9Y251", "" ], [ "Q02985-1", "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.", "Journal of proteome research", "2009 Feb", "Chen R, Jiang X, Sun D, Han G, Wang F, Ye M, Wang L, Zou H", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "Q02985", "" ], [ "Q07075-1", "Structural insights into central hypertension regulation by human aminopeptidase A.", "The Journal of biological chemistry", "2013 Aug 30", "Yang Y, Liu C, Lin YL, Li F", "protein_xref_pubmed", "23888046", "protein_xref_uniprotkb_gly", "Q07075", "" ], [ "Q14118-1", "Characterization of site-specific O-glycan structures within the mucin-like domain of alpha-dystroglycan from human skeletal muscle.", "Glycobiology", "2010 Sep", "Nilsson J, Nilsson J, Larson G, Grahn A", "protein_xref_pubmed", "20507882", "protein_xref_uniprotkb_gly", "Q14118", "" ], [ "Q30154-1", 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Purification and sequence analysis.", "The Journal of biological chemistry", "1987 Apr 25", "Blanchard D, Dahr W, Hummel M, Latron F, Beyreuther K, Cartron JP", "protein_xref_pubmed", "3571235", "protein_xref_uniprotkb_gly", "P04921", "" ], [ "O95477-1", "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.", "Journal of proteome research", "2009 Feb", "Chen R, Jiang X, Sun D, Han G, Wang F, Ye M, Wang L, Zou H", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "O95477", "" ] ] }, "readme": "Name\n - Human Proteoform Glycosylation Citations (UniProtKB)\n\nVersion\n - v-2.0.3\n\nCreated on\n - 2021-06-03T16:32:02.053252\n\nModified on\n - 2023-03-14T16:52:07.896Z\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: human_proteoform_glycosylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_proteoform_glycosylation_sites_uniprotkb.csv\n Output Subdomain\n Name: human_proteoform_citations_glycosylation_sites_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_proteoform_citations_glycosylation_sites_uniprotkb.csv\n Name: human_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_proteoform_citations_glycosylation_sites_uniprotkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"1215\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"949\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"146\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"832\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"947\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"949\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"1215\"\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-2.0.3/reviewed/human_proteoform_citations_glycosylation_sites_uniprotkb.csv" }