{ "bcoid": "GLY_000310", "title": "Human Protein Citations (Reactome)", "description": "The Human Protein Reactions (Reactome) dataset contains reactions information for pathways for human ...", "filename": "human_protein_citations_reactome.csv", "filetype": "csv", "categories": { "species": "Homo sapiens", "molecule": "Protein", "tags": "Reactions Reactome", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "Q96RU8-1...", "Synaptic act..." ], [ "P16220-2...", "Synaptic act..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "Q96RU8-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P16220-2", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q15742-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q14839-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P13726-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P18146-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q13319-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P47928-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q99963-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P41134-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q99081-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P15407-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P55042-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P17752-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q13127-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P01100-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P11161-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q09472-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q02363-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q05215-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P17275-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P17535-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P50570-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P53539-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P15336-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q06889-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "O00141-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P12980-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q02535-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P18846-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P50553-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q00535-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q15078-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q14814-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P19419-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "P11831-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q7LC44-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q13506-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "O15240-1", "Synaptic activity-responsive element in the Arc/Arg3.1 promoter essential for synapse-to-nucleus signaling in activated neurons.", "Proceedings of the National Academy of Sciences of the United States of America", "2009 Jan 6", "Kawashima T, Okuno H, Nonaka M, Adachi-Morishima A, Kyo N, Okamura M, Takemoto-Kimura S, Worley PF, Bito H", "protein_xref_pubmed", "19116276", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q96RU8-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P16220-2", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q15742-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q14839-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P13726-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P18146-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q13319-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P47928-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q99963-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P41134-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q99081-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P15407-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P55042-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P17752-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q13127-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P01100-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P11161-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q09472-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q02363-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q05215-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P17275-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P17535-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P50570-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P53539-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P15336-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q06889-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "O00141-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P12980-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q02535-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P18846-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P50553-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q00535-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q15078-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q14814-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P19419-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "P11831-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q7LC44-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q13506-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "O15240-1", "The serum response factor and a putative novel transcription factor regulate expression of the immediate-early gene Arc/Arg3.1 in neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2009 Feb 4", "Pintchovski SA, Peebles CL, Kim HJ, Verdin E, Finkbeiner S", "protein_xref_pubmed", "19193899", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q96RU8-1", "The Arc of cognition: Signaling cascades regulating Arc and implications for cognitive function and disease.", "Seminars in cell & developmental biology", "2018 May", "Epstein I, Finkbeiner S", "protein_xref_pubmed", "29559111", "protein_xref_reactome", "R-HSA-9031628" ], [ "P16220-2", "The Arc of cognition: Signaling cascades regulating Arc and implications for cognitive function and disease.", "Seminars in cell & developmental biology", "2018 May", "Epstein I, Finkbeiner S", "protein_xref_pubmed", "29559111", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q15742-1", "The Arc of cognition: Signaling cascades regulating Arc and implications for cognitive function and disease.", "Seminars in cell & developmental biology", "2018 May", "Epstein I, Finkbeiner S", "protein_xref_pubmed", "29559111", "protein_xref_reactome", "R-HSA-9031628" ], [ "Q14839-1", "The Arc of cognition: Signaling cascades regulating Arc and implications for cognitive function and disease.", "Seminars in cell & developmental biology", "2018 May", "Epstein I, Finkbeiner S", "protein_xref_pubmed", "29559111", "protein_xref_reactome", "R-HSA-9031628" ], [ "P13726-1", "The Arc of cognition: Signaling cascades regulating Arc and implications for cognitive function and disease.", "Seminars in cell & developmental biology", "2018 May", "Epstein I, Finkbeiner S", "protein_xref_pubmed", "29559111", "protein_xref_reactome", "R-HSA-9031628" ], [ "P18146-1", "The Arc of cognition: Signaling cascades regulating Arc and implications for cognitive function and disease.", "Seminars in cell & developmental biology", "2018 May", "Epstein I, Finkbeiner S", "protein_xref_pubmed", "29559111", "protein_xref_reactome", "R-HSA-9031628" ] ] }, "readme": "Name\n - Human Protein Citations (Reactome)\n\nVersion\n - v-2.0.3\n\nCreated on\n - 2019-11-30T12:49:42.900057\n\nModified on\n - 2022-09-26T09:05:27.638299\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n - \n\nUsability Domain\n - The Human Protein Reactions (Reactome) dataset contains reactions information for pathways for human [taxid:9606] UniProtKB accessions that includes reaction participants, pathway ID, reaction ID, PMID etc from Reactome database. The dataset is derived from 2019-09 UniProtKB release. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n Keywords\n - Reactome\n - Pathway\n - Reactions\n - PMID\n\n Pipeline Steps\n - Step-1: The script loads the Reactome reaction data from the triplestore containing triples from nt file to retrieve the information associated with the Reactome IDs and maps it to the UniProtKB canonical accessions and extracts the dataset in the csv format\n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: human_protein_blacklisted_pmids_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/compiled/human_protein_blacklisted_pmids_uniprotkb.csv\n Name: human_protein_reactions_reactome.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_reactions_reactome.csv\n Name: human_protein_xref_reactome.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_xref_reactome.csv\n Output Subdomain\n Name: human_protein_citations_reactome.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_citations_reactome.csv\n Name: human_protein_citations_reactome.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_citations_reactome.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"10906\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"20355\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"1272\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"5723\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"20193\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"20355\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"1906\"", "downloadurl": "/ln2data/releases/data/v-2.0.3/reviewed/human_protein_citations_reactome.csv" }