{
    "bcoid": "GLY_000021",
    "title": "Human Protein Information (NCBI RefSeq)",
    "description": "The Human Protein Information (NCBI RefSeq) dataset contains human [taxid:9606] protein information such ...",
    "filename": "human_protein_info_refseq.csv",
    "filetype": "csv",
    "categories": {
        "species": "Homo sapiens",
        "molecule": "Protein",
        "tags": "Protein Information",
        "file_type": "csv",
        "status": "Reviewed",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "Q7RTZ2-1...",
                "NP_001243802..."
            ],
            [
                "Q0WX57-1...",
                "NP_001229255..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "p_refseq_ac_..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "p_refseq_ac_best_match"
                },
                {
                    "type": "string",
                    "label": "refseq_protein_name"
                },
                {
                    "type": "string",
                    "label": "refseq_protein_length"
                },
                {
                    "type": "string",
                    "label": "refseq_protein_summary"
                }
            ],
            [
                "Q7RTZ2-1",
                "NP_001243802",
                "ubiquitin carboxyl-terminal hydrolase 17-like protein 1",
                "530",
                ""
            ],
            [
                "Q0WX57-1",
                "NP_001229255",
                "ubiquitin specific peptidase 17 like family member 25",
                "530",
                ""
            ],
            [
                "Q5VWM6-1",
                "NP_001278309",
                "PRAME family member-like",
                "474",
                ""
            ],
            [
                "Q7Z7B8-1",
                "NP_001032821",
                "beta-defensin 128 precursor",
                "93",
                "Defensins are cysteine-rich cationic polypeptides that are important in the immunologic response to invading microorganisms. The antimicrobial protein encoded by this gene is secreted and is a member of the beta defensin protein family. Beta defensin genes are found in several clusters throughout the genome, with this gene mapping to a cluster at 20p13. [provided by RefSeq, Nov 2014]. "
            ],
            [
                "A6NCW0-1",
                "NP_001243800",
                "ubiquitin carboxyl-terminal hydrolase 17-like protein 3",
                "530",
                ""
            ],
            [
                "Q15735-1",
                "NP_001002837",
                "phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform c",
                "638",
                ""
            ],
            [
                "Q8IVW1-1",
                "NP_001275742",
                "ADP-ribosylation factor-like 17-like isoform d",
                "88",
                ""
            ],
            [
                "P03886-1",
                "YP_003024026",
                "NADH dehydrogenase subunit 1",
                "318",
                ""
            ],
            [
                "P03891-1",
                "YP_003024027",
                "NADH dehydrogenase subunit 2",
                "347",
                ""
            ],
            [
                "P00395-1",
                "YP_003024028",
                "cytochrome c oxidase subunit I",
                "513",
                ""
            ],
            [
                "P00403-1",
                "YP_003024029",
                "cytochrome c oxidase subunit II",
                "227",
                ""
            ],
            [
                "P03928-1",
                "YP_003024030",
                "ATP synthase F0 subunit 8",
                "68",
                ""
            ],
            [
                "P00846-1",
                "YP_003024031",
                "ATP synthase F0 subunit 6",
                "226",
                ""
            ],
            [
                "P00414-1",
                "YP_003024032",
                "cytochrome c oxidase subunit III",
                "261",
                ""
            ],
            [
                "P03897-1",
                "YP_003024033",
                "NADH dehydrogenase subunit 3",
                "115",
                ""
            ],
            [
                "P03901-1",
                "YP_003024034",
                "NADH dehydrogenase subunit 4L",
                "98",
                ""
            ],
            [
                "P03905-1",
                "YP_003024035",
                "NADH dehydrogenase subunit 4",
                "459",
                ""
            ],
            [
                "P03915-1",
                "YP_003024036",
                "NADH dehydrogenase subunit 5",
                "603",
                ""
            ],
            [
                "P03923-1",
                "YP_003024037",
                "NADH dehydrogenase subunit 6",
                "174",
                ""
            ],
            [
                "P00156-1",
                "YP_003024038",
                "cytochrome b",
                "380",
                ""
            ],
            [
                "Q8TDE3-1",
                "NP_612204",
                "ribonuclease 8 precursor",
                "154",
                "The protein encoded by this gene belongs to the pancreatic ribonuclease family, a subset of the ribonuclease A superfamily. The protein is expressed prominently in the placenta and exhibits antimicrobial activity against pathogenic bacteria and fungi. [provided by RefSeq, Oct 2014]. "
            ],
            [
                "Q6UVY6-1",
                "NP_056344",
                "DBH-like monooxygenase protein 1 precursor",
                "613",
                ""
            ],
            [
                "P59666-1",
                "NP_005208",
                "neutrophil defensin 3 preproprotein",
                "94",
                "Defensins are a family of antimicrobial and cytotoxic peptides thought to be involved in host defense. They are abundant in the granules of neutrophils and also found in the epithelia of mucosal surfaces such as those of the intestine, respiratory tract, urinary tract, and vagina. Members of the defensin family are highly similar in protein sequence and distinguished by a conserved cysteine motif. The protein encoded by this gene, defensin, alpha 3, is found in the microbicidal granules of neutrophils and likely plays a role in phagocyte-mediated host defense. Several alpha defensin genes are clustered on chromosome 8. This gene differs from defensin, alpha 1 by only one amino acid. This gene and the gene encoding defensin, alpha 1 are both subject to copy number variation. [provided by RefSeq, Oct 2014]. "
            ],
            [
                "Q86UN3-1",
                "NP_848665",
                "reticulon-4 receptor-like 2 precursor",
                "420",
                ""
            ],
            [
                "O14562-1",
                "NP_061989",
                "ubiquitin domain-containing protein UBFD1",
                "309",
                ""
            ],
            [
                "Q8NHP1-1",
                "NP_001335350",
                "aflatoxin B1 aldehyde reductase member 4",
                "331",
                "This gene is one of three aldo-keto reductase genes that are present in a cluster on the p arm of chromosome 1. The encoded proteins are involved in the reduction of the dialdehyde protein-binding form of aflatoxin B1 (AFB1) to the non-binding AFB1 dialcohol. It has been speculated that this family member encodes a selenoprotein, which includes a selenocysteine (Sec) residue in lieu of a UGA translational termination codon. However, there is no evidence that such a protein is produced in vivo. The alternative interpretation is that this family member is a segregating pseudogene, where some individuals have an allele that encodes a functional enzyme, while other individuals have an allele encoding a protein that is predicted to be non-functional. [provided by RefSeq, Feb 2017]. "
            ],
            [
                "P0C7I6-2",
                "NP_001073972",
                "coiled-coil domain-containing protein 159",
                "297",
                ""
            ],
            [
                "Q8IZ63-1",
                "NP_001127788",
                "proline-rich protein 22",
                "422",
                ""
            ],
            [
                "Q15822-1",
                "NP_000733",
                "neuronal acetylcholine receptor subunit alpha-2 isoform 1 precursor",
                "529",
                "Nicotinic acetylcholine receptors (nAChRs) are ligand-gated ion channels formed by a pentameric arrangement of alpha and beta subunits to create distinct muscle and neuronal receptors. Neuronal receptors are found throughout the peripheral and central nervous system where they are involved in fast synaptic transmission. This gene encodes an alpha subunit that is widely expressed in the brain. The proposed structure for nAChR subunits is a conserved N-terminal extracellular domain followed by three conserved transmembrane domains, a variable cytoplasmic loop, a fourth conserved transmembrane domain, and a short C-terminal extracellular region. Mutations in this gene cause autosomal dominant nocturnal frontal lobe epilepsy type 4. Single nucleotide polymorphisms (SNPs) in this gene have been associated with nicotine dependence. [provided by RefSeq, Nov 2009]. "
            ],
            [
                "Q8WUY1-1",
                "NP_057731",
                "protein THEM6 isoform 1",
                "208",
                ""
            ],
            [
                "A2RUT3-1",
                "NP_001008270",
                "transmembrane protein 89 precursor",
                "159",
                ""
            ],
            [
                "Q5TCH4-1",
                "NP_001010969",
                "cytochrome P450 4A22 isoform 1",
                "519",
                "This gene encodes a member of the cytochrome P450 superfamily of enzymes. The cytochrome P450 proteins are monooxygenases which catalyze many reactions involved in drug metabolism and synthesis of cholesterol, steroids and other lipids. This gene is part of a cluster of cytochrome P450 genes on chromosome 1p33. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Apr 2015]. "
            ],
            [
                "Q8NG35-1",
                "NP_001035793",
                "beta-defensin 105 precursor",
                "78",
                "Defensins form a family of antimicrobial and cytotoxic peptides made by neutrophils. Defensins are short, processed peptide molecules that are classified by structure into three groups: alpha-defensins, beta-defensins and theta-defensins. All beta-defensin genes are densely clustered in four to five syntenic chromosomal regions. Chromosome 8p23 contains at least two copies of the duplicated beta-defensin cluster. This duplication results in two identical copies of defensin, beta 105, DEFB105A and DEFB105B, in tail-to-tail orientation. This gene, DEFB105B, represents the more telomeric copy. [provided by RefSeq, Oct 2014]. "
            ],
            [
                "Q5H913-1",
                "NP_001155963",
                "ADP-ribosylation factor-like protein 13A",
                "256",
                ""
            ],
            [
                "Q7Z7L8-1",
                "NP_001138505",
                "uncharacterized protein C11orf96",
                "122",
                ""
            ],
            [
                "P04118-1",
                "NP_001823",
                "colipase isoform 1 preproprotein",
                "112",
                "The protein encoded by this gene is a cofactor needed by pancreatic lipase for efficient dietary lipid hydrolysis. It binds to the C-terminal, non-catalytic domain of lipase, thereby stabilizing an active conformation and considerably increasing the overall hydrophobic binding site. The gene product allows lipase to anchor noncovalently to the surface of lipid micelles, counteracting the destabilizing influence of intestinal bile salts. This cofactor is only expressed in pancreatic acinar cells, suggesting regulation of expression by tissue-specific elements. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2011]. "
            ],
            [
                "O75310-1",
                "NP_001064",
                "UDP-glucuronosyltransferase 2B11 precursor",
                "529",
                ""
            ],
            [
                "Q2T9J0-1",
                "NP_001035363",
                "peroxisomal leader peptide-processing protease isoform b",
                "398",
                "This gene encodes a protease that removes the N-terminal peroxisomal targeting signal (PTS2) from proteins produced in the cytosol, thereby facilitating their import into the peroxisome. The encoded protein is also capable of removing the C-terminal peroxisomal targeting signal (PTS1) from proteins in the peroxisomal matrix. The full-length protein undergoes self-cleavage to produce shorter, potentially inactive, peptides. Alternative splicing results in multiple transcript variants for this gene. [provided by RefSeq, Jan 2013]. "
            ],
            [
                "Q8NHW4-1",
                "NP_001278397",
                "C-C motif chemokine 4-like isoform 1 precursor",
                "87",
                "This gene is one of several cytokine genes that are clustered on the q-arm of chromosome 17. Cytokines are a family of secreted proteins that function in inflammatory and immunoregulatory processes. The protein encoded by this family member is similar to the chemokine (C-C motif) ligand 4 product, which inhibits HIV entry by binding to the cellular receptor CCR5. The copy number of this gene varies among individuals, where most individuals have one to five copies. This gene copy contains a non-consensus splice acceptor site at the 3' terminal exon found in other highly similar gene copies, and it thus uses other alternative splice sites for the 3' terminal exon, resulting in multiple transcript variants. [provided by RefSeq, Apr 2014]. "
            ],
            [
                "Q96RT6-1",
                "NP_758441",
                "cTAGE family member 2",
                "745",
                ""
            ],
            [
                "Q6ZMN7-1",
                "NP_001158067",
                "PDZ domain-containing RING finger protein 4 isoform 1",
                "1036",
                ""
            ],
            [
                "Q9UC07-1",
                "NP_068734",
                "zinc finger protein 69 isoform 2",
                "149",
                ""
            ],
            [
                "Q8NEA5-1",
                "NP_689687",
                "uncharacterized protein C19orf18 precursor",
                "215",
                ""
            ],
            [
                "Q14773-1",
                "NP_001034221",
                "intercellular adhesion molecule 4 isoform 3 precursor",
                "272",
                "This gene encodes the Landsteiner-Wiener (LW) blood group antigen(s) that belongs to the immunoglobulin (Ig) superfamily, and that shares similarity with the intercellular adhesion molecule (ICAM) protein family. This ICAM protein contains 2 Ig-like C2-type domains and binds to the leukocyte adhesion LFA-1 protein. The molecular basis of the LW(A)/LW(B) blood group antigens is a single aa variation at position 100; Gln-100=LW(A) and Arg-100=LW(B). Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2008]. "
            ],
            [
                "O14657-1",
                "NP_001304822",
                "torsin-1B isoform 2 precursor",
                "216",
                "The protein encoded by this gene is an ATPase found primarily in the endoplasmic reticulum and nuclear envelope. This gene has a highly-similar neighboring gene, TOR1A, that encodes a protein that is likely to interact in a complex with this protein. Finally, this protein may act as a chaperone and play a role in maintaining the integrity of the nuclear envelope and endoplasmic reticulum. Several transcript variants, some protein-coding and others non-protein coding, have been found for this gene. [provided by RefSeq, Dec 2015]. "
            ],
            [
                "A0A494C1I1-1",
                "NP_001155843",
                "uncharacterized protein LOC728392",
                "119",
                ""
            ],
            [
                "Q6ZMT9-1",
                "NP_001130008",
                "death domain-containing protein 1 isoform 2",
                "616",
                "This gene encodes a protein which contains a death domain. Death domain-containing proteins function in signaling pathways and formation of signaling complexes, as well as the apoptosis pathway. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2012]. "
            ],
            [
                "Q587J7-1",
                "NP_001104292",
                "putative ATP-dependent RNA helicase TDRD12 isoform 2",
                "395",
                ""
            ],
            [
                "O75715-1",
                "NP_001500",
                "epididymal secretory glutathione peroxidase isoform 1 precursor",
                "221",
                "This gene belongs to the glutathione peroxidase family. It is specifically expressed in the epididymis in the mammalian male reproductive tract, and is androgen-regulated. Unlike several other characterized glutathione peroxidases, this enzyme is not a selenoprotein, lacking the selenocysteine residue. Thus, it is selenium-independent, and has been proposed to play a role in protecting the membranes of spermatozoa from the damaging effects of lipid peroxidation and/or preventing premature acrosome reaction. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Oct 2016]. "
            ],
            [
                "Q99878-1",
                "NP_066544",
                "histone cluster 1, H2aj",
                "128",
                "Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H2A family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the small histone gene cluster on chromosome 6p22-p21.3. [provided by RefSeq, Aug 2015]. "
            ],
            [
                "Q5PT55-1",
                "NP_001010893",
                "sodium/bile acid cotransporter 5 precursor",
                "438",
                ""
            ],
            [
                "Q6UY18-1",
                "NP_001004432",
                "leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4 precursor",
                "593",
                ""
            ],
            [
                "Q9BZM4-1",
                "NP_078794",
                "UL16-binding protein 3",
                "244",
                "The protein encoded by this gene is one of several related ligands of the KLRK1/NKG2D receptor, which is found in primary NK cells. Binding of these ligands to the receptor activates several signal transduction pathways, including the JAK2, STAT5, and ERK pathways. The encoded protein is expressed solubly and on the surface of many tumor cells, making it potentially an important target for therapeutics. [provided by RefSeq, Nov 2015]. "
            ],
            [
                "Q5T440-1",
                "NP_001010867",
                "putative transferase CAF17, mitochondrial isoform 1 precursor",
                "356",
                "The protein encoded by this gene localizes to the mitochondrion and is part of the iron-sulfur cluster assembly pathway. The encoded protein functions late in the biosynthesis of mitochondrial 4Fe-4S proteins. Defects in this gene have been associated with autosomal recessive spastic paraplegia-74 and with multiple mitochondrial dysfunctions syndrome-3. Two transcript variants encoding different isoforms have been found for this gene. The smaller isoform is not likely to be localized to the mitochondrion since it lacks the amino-terminal transit peptide. [provided by RefSeq, Jul 2015]. "
            ],
            [
                "Q5T750-1",
                "NP_001019850",
                "skin-specific protein 32",
                "250",
                ""
            ],
            [
                "B3EWG6-1",
                "NP_001131020",
                "protein FAM25C",
                "89",
                ""
            ],
            [
                "O75690-1",
                "NP_066384",
                "keratin-associated protein 5-8",
                "187",
                ""
            ],
            [
                "Q6UWV7-1",
                "NP_001036158",
                "protein shisa-like-2A",
                "190",
                ""
            ],
            [
                "P0DM35-1",
                "NP_001263616",
                "metallothionein 1H-like protein 1",
                "61",
                "This gene is a retrotransposed gene, compared to MT1H (GeneID:4496). This retrogene is transcribed. It retains a full-length CDS, and is assumed to be translated. Compared to the MT1H product, this protein product differs at three internal amino acids, two of which are at metal-binding sites. [provided by RefSeq, Mar 2013]. "
            ],
            [
                "Q8N9V2-1",
                "NP_848651",
                "probable E3 ubiquitin-protein ligase TRIML1",
                "468",
                "The protein encoded by this gene is a tripartite motif family protein with similarities to E3 ubiquitin-protein ligases. While the function of the encoded protein has not been determined, the orthologous protein in mouse has been shown to bind ubiquitin-specific protease 5 and is involved in the blastocyst development stage. [provided by RefSeq, Sep 2016]. "
            ],
            [
                "Q6UWW0-1",
                "NP_976222",
                "lipocalin-15 precursor",
                "184",
                ""
            ],
            [
                "Q4LEZ3-1",
                "NP_001020528",
                "alanine and arginine-rich domain-containing protein",
                "155",
                ""
            ],
            [
                "Q7L211-1",
                "NP_116248",
                "protein ABHD13",
                "337",
                ""
            ],
            [
                "Q8NGI3-1",
                "NP_001005180",
                "olfactory receptor 56B1",
                "324",
                "Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]. "
            ],
            [
                "Q6UXE8-1",
                "NP_932079",
                "butyrophilin-like protein 3 precursor",
                "466",
                ""
            ],
            [
                "H3BNL8-1",
                "NP_001269421",
                "armadillo-like helical domain-containing protein 2",
                "230",
                ""
            ],
            [
                "Q9BRH9-1",
                "NP_612376",
                "zinc finger protein 251",
                "671",
                ""
            ],
            [
                "A4IF30-1",
                "NP_001293016",
                "solute carrier family 35 member F4 isoform a",
                "485",
                ""
            ],
            [
                "B4DXR9-1",
                "NP_001131080",
                "zinc finger protein 732",
                "585",
                "This gene encodes a kruppel-associated box-containing zinc finger protein (KRAB-ZFP). The encoded protein contains an N-terminal kruppel-associated box (KRAB) domain and sixteen C-terminal C2H2-type zinc finger domains. The KRAB-ZFPs represent the largest family of mammalian transcriptional repressors, which function through the recruitment of the nuclear co-factor KRAB-Associated Protein 1 (KAP1), to engage histone modifiers and induce heterochromatin formation. [provided by RefSeq, Jul 2017]. "
            ],
            [
                "Q17R31-1",
                "NP_001036017",
                "putative deoxyribonuclease TATDN3 isoform 1",
                "274",
                ""
            ],
            [
                "Q9BYC2-1",
                "NP_071403",
                "succinyl-CoA:3-ketoacid coenzyme A transferase 2, mitochondrial precursor",
                "517",
                "The protein encoded by this gene catalyzes the transfer of a CoA group from succinate to acetoacetate and is an important enzyme in ketone body catabolism. The encoded protein localizes to the mitochondrion. This gene is intronless, and a pseudogene of this gene is located elsewhere on chromosome 1. [provided by RefSeq, Aug 2016]. "
            ],
            [
                "O95473-1",
                "NP_036583",
                "synaptogyrin-4",
                "234",
                "This gene encodes an integral membrane protein. The gene belongs to the synaptogyrin gene family. Like other members of the family the protein contains four transmembrane regions. The exact function of this protein is unclear. [provided by RefSeq, Jul 2008]. "
            ],
            [
                "Q6L8G8-1",
                "NP_001012521",
                "keratin-associated protein 5-7",
                "165",
                ""
            ],
            [
                "Q5JVG8-1",
                "NP_001092739",
                "zinc finger protein 506 isoform 1",
                "444",
                ""
            ],
            [
                "P60411-1",
                "NP_941963",
                "keratin-associated protein 10-9",
                "292",
                ""
            ],
            [
                "Q9NUJ7-1",
                "NP_060860",
                "PI-PLC X domain-containing protein 1 isoform 1",
                "323",
                "This gene is the most terminal protein-coding gene in the pseudoautosomal (PAR) region on chromosomes X and Y. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Mar 2010]. "
            ],
            [
                "P17031-1",
                "NP_062537",
                "zinc finger protein 26 isoform 2",
                "533",
                ""
            ],
            [
                "Q9ULI1-1",
                "NP_001138462",
                "NACHT and WD repeat domain-containing protein 2",
                "1742",
                ""
            ],
            [
                "Q6SA08-1",
                "NP_001171668",
                "testis-specific serine/threonine-protein kinase 4 isoform 1",
                "338",
                "This gene encodes a member of the testis-specific serine/threonine kinase family. The encoded protein is thought to be involved in spermatogenesis via stimulation of the CREB/CRE responsive pathway through phosphorylation of the cAMP responsive element binding protein transcription factor. Alternative splicing results in multiple transcript variants.[provided by RefSeq, May 2010]. "
            ],
            [
                "Q8NGF7-1",
                "NP_001005489",
                "olfactory receptor 5B17",
                "314",
                "Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]. "
            ],
            [
                "Q96DU9-1",
                "NP_543022",
                "polyadenylate-binding protein 5",
                "382",
                "This gene encodes a protein that binds to the polyA tail found at the 3' end of most eukaryotic mRNAs. It is thought to play a role in the regulation of mRNA metabolic processes in the cytoplasm. This gene is located in a gene-poor region within the X-specific 13d-sY43 subinterval of the chromosome Xq21.3/Yp11.2 homology block. It is located close to translocation breakpoints associated with premature ovarian failure, and is therefore a potential candidate gene for this disorder. [provided by RefSeq, May 2010]. "
            ],
            [
                "Q9NR00-1",
                "NP_064515",
                "transcriptional and immune response regulator",
                "106",
                "This gene encodes a small, monomeric, predominantly unstructured protein that functions as a positive regulator of the Wnt/beta-catenin signaling pathway. This protein interacts with a repressor of beta-catenin mediated transcription at nuclear speckles. It is thought to competitively block interactions of the repressor with beta-catenin, resulting in up-regulation of beta-catenin target genes. The encoded protein may also play a role in the NF-kappaB and ERK1/2 signaling pathways. Expression of this gene may play a role in the proliferation of several types of cancer including thyroid cancer, breast cancer and hematological malignancies. [provided by RefSeq, Nov 2011]. "
            ],
            [
                "Q9H0I9-1",
                "NP_115512",
                "transketolase-like protein 2",
                "626",
                ""
            ],
            [
                "Q9UIE0-1",
                "NP_006291",
                "zinc finger protein 230",
                "474",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Human Protein Information (NCBI RefSeq)\n\nVersion\n   - v-2.0.3\n\nCreated on\n  - 2019-01-23T17:21:05.888176\n\nModified on\n   - 2022-09-26T08:44:32.946781\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n   - Not Applicable []\n\nChecksum\n   - \n\nUsability Domain\n   - The Human Protein Information (NCBI RefSeq) dataset contains human [taxid:9606] protein information such as protein accession, name, length and protein function summary from NCBI RefSeq database.  The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen\n\nDescription Domain\n   Keywords\n   - protein information\n   - protein length\n   - NCBI RefSeq\n   - protein summary\n\n   Pipeline Steps\n   - Step-1: The script parses the NCBI RefSeq gpff files to extract the accession, length, protein summary and then maps the NCBI RefSeq accesion to the UniProtKB Canonical accessions\n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: human_protein_xref_refseq.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_xref_refseq.csv\n      Name: refseq_protein_all_9606.gpff\n      URI: /data/shared/glyds/downloads/ncbi/refseq/2022_10/refseq_protein_all_9606.gpff\n   Output Subdomain\n      Name: human_protein_info_refseq.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_info_refseq.csv\n      Name: human_protein_info_refseq.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.0.3/reviewed/human_protein_info_refseq.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"18694\"\n      Name: \"p_refseq_ac_best_match\"\n     Description: \"Best match NCBI RefSeq protein accession to UniProtKB canonical accession\"\n      Unique Values: \"21379\"\n      Name: \"refseq_protein_name\"\n     Description: \"Name of the protein in NCBI RefSeq database\"\n      Unique Values: \"21353\"\n      Name: \"refseq_protein_length\"\n     Description: \"Length of the protein in NCBI RefSeq database\"\n      Unique Values: \"2133\"\n      Name: \"refseq_protein_summary\"\n     Description: \"Function of the protein in NCBI RefSeq database\"\n      Unique Values: \"11956\"",
    "downloadurl": "/ln2data/releases/data/v-2.0.3/reviewed/human_protein_info_refseq.csv"
}
