{ "glytoucan_ac": "G00058MO", "number_monosaccharides": 4, "mass": 748.27, "mass_pme": 944.49, "fully_determined": "yes", "iupac": "beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->", "wurcs": "WURCS=2.0/2,4,3/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2-1-2/a4-b1_b3-c1_c4-d1", "glycoct": "RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:b-dglc-HEX-1:5 5s:n-acetyl 6b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3o(3+1)4d 4:4d(2+1)5n 5:4o(4+1)6d", "inchi": "InChI=1S/C28H48N2O21/c1-7(35)29-13-17(39)22(11(5-33)45-25(13)44)50-28-21(43)24(16(38)10(4-32)47-28)51-26-14(30-8(2)36)18(40)23(12(6-34)48-26)49-27-20(42)19(41)15(37)9(3-31)46-27/h9-28,31-34,37-44H,3-6H2,1-2H3,(H,29,35)(H,30,36)/t9-,10-,11-,12-,13-,14-,15+,16+,17-,18-,19+,20-,21-,22-,23-,24+,25-,26+,27+,28+/m1/s1", "glycam": "DGalpb1-4DGlcpNAcb1-3DGalpb1-4DGlcpNAcb1-OH", "smiles_isomeric": "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O[C@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O)O)NC(=O)C)O)O", "inchi_key": { "key": "FQFWRDMICMXFKR-AVWCGHAOSA-N", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/FQFWRDMICMXFKR-AVWCGHAOSA-N" }, "crossref": [ { "id": "G00058MO", "database": "GlyTouCan", "url": "https://glytoucan.org/Structures/Glycans/G00058MO" } ], "publication": [ { "title": "Characterization of a blood group I-active ganglioside. Structural requirements for I and i specificities.", "journal": "The Journal of biological chemistry", "date": "1979", "authors": "Watanabe K, Hakomori SI, Childs RA, Feizi T", "evidence": [ { "database": "Glycan Motif", "id": "GGM.000002", "url": "https://glycomotif.glyomics.org/glycomotif/GGM.000002" } ], "reference": [ { "type": [ "PubMed" ], "id": "107170", "url": "https://glygen.org/publication/PubMed/107170" } ] }, { "title": "Human IgG3 monoclonal antibody directed to an unbranched repeating type 2 chain (Gal beta 1----4GlcNAc beta 1----3Gal beta 1----4GlcNAc beta 1----3Gal beta 1----R) which is highly expressed in colonic and hepatocellular carcinoma.", "journal": "Cancer research", "date": "1989", "authors": "Miyake M, Kohno N, Nudelman ED, Hakomori S", "evidence": [ { "database": "Glycan Motif", "id": "GGM.000002", "url": "https://glycomotif.glyomics.org/glycomotif/GGM.000002" } ], "reference": [ { "type": [ "PubMed" ], "id": "2551493", "url": "https://glygen.org/publication/PubMed/2551493" } ] }, { "title": "The repertoire of glycan determinants in the human glycome.", "journal": "Molecular bioSystems", "date": "2009", "authors": "Cummings RD", "evidence": [ { "database": "Glycan Motif", "id": "GGM.000002", "url": "https://glycomotif.glyomics.org/glycomotif/GGM.000002" } ], "reference": [ { "type": [ "PubMed" ], "id": "19756298", "url": "https://glygen.org/publication/PubMed/19756298" } ] } ], "residues": [], "composition": [ { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "Hexose", "residue": "hex", "count": 2, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 2, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": 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"https://glytoucan.org/Structures/Glycans/G99883ZA" } ], "subsumption": [ { "id": "G14052TA", "type": "Saccharide" }, { "id": "G22582AF", "type": "Saccharide" }, { "id": "G43837UW", "type": "Topology" }, { "id": "G45207BM", "type": "Saccharide" }, { "id": "G53434XO", "type": "BaseComposition" }, { "id": "G54670RT", "type": "Saccharide" }, { "id": "G63628AV", "type": "BaseComposition" }, { "id": "G65721PE", "type": "Topology" }, { "id": "G72872SQ", "type": "Topology" }, { "id": "G82395RT", "type": "Saccharide" }, { "id": "G83574AW", "type": "Composition" }, { "id": "G90478XM", "type": "Topology" } ], "names": [ { "name": "Type 2 LN2", "domain": "motifname" } ], "synonym": [ "i antigen" ], "keywords": [ { "label": "LacNAc", "url": "https://glycomotif.glyomics.org/glycomotif/LacNAc" }, { "label": "N-acetyllactosamine", "url": "https://glycomotif.glyomics.org/glycomotif/N-acetyllactosamine" }, { "label": "N-acetyllactosamine type 2", "url": "https://glycomotif.glyomics.org/glycomotif/N-acetyllactosamine_type_2" } ], "reducing_end": "false", "aglycon": "R", "alignment_method": "Substructure", "dictionary": { "term": "i antigen", "term_in_sentence": "Inasmuch as the hybridoma was established by hybridization of lymphocytes derived from regional lymph nodes of lung cancer, and the antigen was found in the patient's lung cancer tissue, the i antigen in lung cancer is probably recognized as a tumor-associated antigen by the host's immune cell system.[PMID:2422274]", "publication": "2422274|15679458|21912254|12468428|28508465|6203982|30728302|8449405|9122902|10360315|6159787|6183759|518539|6715951|21933024", "definition": "", "term_xref": "GlycoMotif:GGM.000004|GlycoMotif:GGM.000002", "best_match": "GlycoMotif:GGM.000004|GlycoMotif:GGM.000002|GTC:G46055MA|GTC:G00058MO", "synonymns": [ "Type 2 LN2" ], "function": "", "disease_associations": "", "wikipedia": "", "essentials_of_glycobiology": "", "evidence": [ { "id": "GD000111", "url": "https://wiki.glygen.org/index.php/Glycan_structure_dictionary#GD000111", "database": "Glycan Dictionary" } ] }, "motif_ac": "GGM.000002" }