{ "bcoid": "GLY_000256", "title": "Human Protein Citations (RefSeq)", "description": "The Human Protein Citations (RefSeq) datasets contains human [taxid:9606] UniProtKB accessions mapped ...", "filename": "human_protein_citations_refseq.csv", "filetype": "csv", "categories": { "species": "Homo sapiens", "molecule": "Protein", "tags": "Protein Citations", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "P0C7P3-1...", "SLFN14 mutat..." ], [ "Q8N7H5-1...", "SUMO Modific..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "P0C7P3-1", "SLFN14 mutations underlie thrombocytopenia with excessive bleeding and platelet secretion defects.", "The Journal of clinical investigation", "2015 Sep", "Fletcher SJ, Johnson B, Lowe GC, Bem D, Drake S, Lordkipanidze M, Guiu IS, Dawood B, Rivera J, Simpson MA, Daly ME, Motwani J, Collins PW, Watson SP, Morgan NV", "protein_xref_pubmed", "26280575", "protein_xref_refseq", "NP_001123292" ], [ "Q8N7H5-1", "SUMO Modification of PAF1/PD2 Enables PML Interaction and Promotes Radiation Resistance in Pancreatic Ductal Adenocarcinoma.", "Molecular and cellular biology", "2021 Nov 22", "Rauth S, Karmakar S, Shah A, Seshacharyulu P, Nimmakayala RK, Ganguly K, Bhatia R, Muniyan S, Kumar S, Dutta S, Lin C, Datta K, Batra SK, Ponnusamy MP", "protein_xref_pubmed", "34570619", "protein_xref_refseq", "NP_001243755" ], [ "Q9NPA8-1", "A TFTC/STAGA module mediates histone H2A and H2B deubiquitination, coactivates nuclear receptors, and counteracts heterochromatin silencing.", "Molecular cell", "2008 Jan 18", "Zhao Y, Lang G, Ito S, Bonnet J, Metzger E, Sawatsubashi S, Suzuki E, Le Guezennec X, Stunnenberg HG, Krasnov A, Georgieva SG, Schule R, Takeyama K, Kato S, Tora L, Devys D", "protein_xref_pubmed", "18206972", "protein_xref_refseq", "NP_001180486" ], [ "O75953-3", "Critical role of zebrafish dnajb5 in myocardial proliferation and regeneration.", "Journal of genetics and genomics = Yi chuan xue bao", "2020 Aug", "Pang M, Xiong C, Xiao C, Du J, Zheng L, Bai L, Zhu X, Xiong JW", "protein_xref_pubmed", "33191150", "protein_xref_refseq", "NP_001128476" ], [ "Q9Y2T7-1", "A germline-specific class of small RNAs binds mammalian Piwi proteins.", "Nature", "2006 Jul 13", "Girard A, Sachidanandam R, Hannon GJ, Carmell MA", "protein_xref_pubmed", "16751776", "protein_xref_refseq", "NP_057066" ], [ "Q8N6U8-1", "Pre-B-cell leukemia homeobox 1 (PBX1) shows functional and possible genetic association with bone mineral density variation.", "Human molecular genetics", "2009 Feb 15", "Cheung CL, Chan BY, Chan V, Ikegawa S, Kou I, Ngai H, Smith D, Luk KD, Huang QY, Mori S, Sham PC, Kung AW", "protein_xref_pubmed", "19064610", "protein_xref_refseq", "NP_001254538" ], [ "P20963-1", "Engagement of the TcR/CD3 complex stimulates p59fyn(T) activity: detection of associated proteins at 72 and 120-130 kD.", "Molecular immunology", "1992 Dec", "da Silva AJ, Yamamoto M, Zalvan CH, Rudd CE", "protein_xref_pubmed", "1454062", "protein_xref_refseq", "NP_000725" ], [ "P49368-1", "CCT3 suppression prompts apoptotic machinery through oxidative stress and energy deprivation in breast and prostate cancers.", "Free radical biology & medicine", "2021 Mar", "Temiz E, Koyuncu I, Sahin E", "protein_xref_pubmed", "33508424", "protein_xref_refseq", "NP_001008800" ], [ "P29033-1", "Nonsyndromic Hearing Loss and Deafness, DFNB1", "GeneReviews((R))", "1993", "Smith RJH, Jones MKN", "protein_xref_pubmed", "20301449", "protein_xref_refseq", "NP_003995" ], [ "Q14978-1", "Nucleolar TRF2 attenuated nucleolus stress-induced HCC cell-cycle arrest by altering rRNA synthesis.", "Cell death & disease", "2018 May 1", "Yuan F, Xu C, Li G, Tong T", "protein_xref_pubmed", "29725012", "protein_xref_refseq", "NP_001271317" ], [ "P60468-1", "Sec61beta facilitates the maintenance of endoplasmic reticulum homeostasis by associating microtubules.", "Protein & cell", "2018 Jul", "Zhu Y, Zhang G, Lin S, Shi J, Zhang H, Hu J", "protein_xref_pubmed", "29168059", "protein_xref_refseq", "NP_006799" ], [ "Q9BV47-1", "MKP-8, a novel MAPK phosphatase that inhibits p38 kinase.", "Biochemical and biophysical research communications", "2005 May 6", "Vasudevan SA, Skoko J, Wang K, Burlingame SM, Patel PN, Lazo JS, Nuchtern JG, Yang J", "protein_xref_pubmed", "15796912", "protein_xref_refseq", "NP_001292044" ], [ "O60479-1", "Effects of DLX3 on the osteogenic differentiation of induced pluripotent stem cellderived mesenchymal stem cells.", "Molecular medicine reports", "2021 Apr", "Li J, Lin Q, Lin Y, Lai R, Zhang W", "protein_xref_pubmed", "33655330", "protein_xref_refseq", "NP_005211" ], [ "Q96PK6-1", "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry.", "Analytical chemistry", "2004 May 15", "Brill LM, Salomon AR, Ficarro SB, Mukherji M, Stettler-Gill M, Peters EC", "protein_xref_pubmed", "15144186", "protein_xref_refseq", "NP_001185765" ], [ "Q6IA69-1", "Bi-allelic Mutations in NADSYN1 Cause Multiple Organ Defects and Expand the Genotypic Spectrum of Congenital NAD Deficiency Disorders.", "American journal of human genetics", "2020 Jan 2", "Szot JO, Campagnolo C, Cao Y, Iyer KR, Cuny H, Drysdale T, Flores-Daboub JA, Bi W, Westerfield L, Liu P, Leung TN, Choy KW, Chapman G, Xiao R, Siu VM, Dunwoodie SL", "protein_xref_pubmed", "31883644", "protein_xref_refseq", "NP_060631" ], [ "P20594-1", "Selective activation of the B natriuretic peptide receptor by C-type natriuretic peptide (CNP).", "Science (New York, N.Y.)", "1991 Apr 5", "Koller KJ, Lowe DG, Bennett GL, Minamino N, Kangawa K, Matsuo H, Goeddel DV", "protein_xref_pubmed", "1672777", "protein_xref_refseq", "NP_003986" ], [ "Q99956-1", "Expression of Dual-Specificity Phosphatase 9 in Placenta and Its Relationship with Gestational Diabetes Mellitus.", "Journal of diabetes research", "2019", "Wei Q, Pu X, Zhang L, Xu Y, Duan M, Wang Y", "protein_xref_pubmed", "31772940", "protein_xref_refseq", "NP_001305432" ], [ "Q8WVF2-1", "Ucma, a novel secreted cartilage-specific protein with implications in osteogenesis.", "The Journal of biological chemistry", "2008 Mar 14", "Surmann-Schmitt C, Dietz U, Kireva T, Adam N, Park J, Tagariello A, Onnerfjord P, Heinegard D, Schlotzer-Schrehardt U, Deutzmann R, von der Mark K, Stock M", "protein_xref_pubmed", "18156182", "protein_xref_refseq", "NP_001290047" ], [ "P58062-1", "ECRG2, a novel candidate of tumor suppressor gene in the esophageal carcinoma, interacts directly with metallothionein 2A and links to apoptosis.", "Biochemical and biophysical research communications", "2003 Mar 21", "Cui Y, Wang J, Zhang X, Lang R, Bi M, Guo L, Lu SH", "protein_xref_pubmed", "12646258", "protein_xref_refseq", "NP_115955" ], [ "Q9NR71-1", "Neutral ceramidase: Advances in mechanisms, cell regulation, and roles in cancer.", "Advances in biological regulation", "2019 Jan", "Coant N, Hannun YA", "protein_xref_pubmed", "30389354", "protein_xref_refseq", "NP_001137446" ], [ "P15907-1", "The B cell antigen CD75 is a cell surface sialytransferase.", "The Journal of experimental medicine", "1990 Aug 1", "Stamenkovic I, Asheim HC, Deggerdal A, Blomhoff HK, Smeland EB, Funderud S", "protein_xref_pubmed", "2373995", "protein_xref_refseq", "NP_003023" ], [ "O00507-1", "Genetic variants of Y chromosome are associated with a protective lipid profile in black men.", "Arteriosclerosis, thrombosis, and vascular biology", "2008 Aug", "Russo P, Siani A, Miller MA, Karanam S, Esposito T, Gianfrancesco F, Barba G, Lauria F, Strazzullo P, Cappuccio FP", "protein_xref_pubmed", "18511697", "protein_xref_refseq", "NP_004645" ], [ "Q6P461-1", "An integrated clinico-metabolomic model improves prediction of death in sepsis.", "Science translational medicine", "2013 Jul 24", "Langley RJ, Tsalik EL, van Velkinburgh JC, Glickman SW, Rice BJ, Wang C, Chen B, Carin L, Suarez A, Mohney RP, Freeman DH, Wang M, You J, Wulff J, Thompson JW, Moseley MA, Reisinger S, Edmonds BT, Grinnell B, Nelson DR, Dinwiddie DL, Miller NA, Saunders CJ, Soden SS, Rogers AJ, Gazourian L, Fredenburgh LE, Massaro AF, Baron RM, Choi AM, Corey GR, Ginsburg GS, Cairns CB, Otero RM, Fowler VG Jr, Rivers EP, Woods CW, Kingsmore SF", "protein_xref_pubmed", "23884467", "protein_xref_refseq", "NP_997204" ], [ "Q92934-1", "Interference of BAD (Bcl-xL/Bcl-2-associated death promoter)-induced apoptosis in mammalian cells by 14-3-3 isoforms and P11.", "Molecular endocrinology (Baltimore, Md.)", "1997 Nov", "Hsu SY, Kaipia A, Zhu L, Hsueh AJ", "protein_xref_pubmed", "9369453", "protein_xref_refseq", "NP_004313" ], [ "Q9NY12-1", "SUMOylation- and GAR1-Dependent Regulation of Dyskerin Nuclear and Subnuclear Localization.", "Molecular and cellular biology", "2021 Mar 24", "MacNeil DE, Lambert-Lanteigne P, Qin J, McManus FP, Bonneil E, Thibault P, Autexier C", "protein_xref_pubmed", "33526451", "protein_xref_refseq", "NP_061856" ], [ "P13584-1", "Characterization of an Additional Splice Acceptor Site Introduced into CYP4B1 in Hominoidae during Evolution.", "PloS one", "2015", "Schmidt EM, Wiek C, Parkinson OT, Roellecke K, Freund M, Gombert M, Lottmann N, Steward CA, Kramm CM, Yarov-Yarovoy V, Rettie AE, Hanenberg H", "protein_xref_pubmed", "26355749", "protein_xref_refseq", "NP_000770" ], [ "P03372-1", "Upstream open reading frames regulate the translation of the multiple mRNA variants of the estrogen receptor alpha.", "The Journal of biological chemistry", "2002 Oct 4", "Kos M, Denger S, Reid G, Gannon F", "protein_xref_pubmed", "12147702", "protein_xref_refseq", "NP_000116" ], [ "P09601-1", "Forensic significance of intracardiac heme oxygenase-1 expression in acute myocardial ischemia.", "Scientific reports", "2021 Nov 8", "Kuninaka Y, Ishida Y, Nosaka M, Ishigami A, Taruya A, Shimada E, Kimura A, Yamamoto H, Ozaki M, Furukawa F, Kondo T", "protein_xref_pubmed", "34750390", "protein_xref_refseq", "NP_002124" ], [ "Q9C0G0-1", "Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.", "American journal of human genetics", "2009 Nov", "Talmud PJ, Drenos F, Shah S, Shah T, Palmen J, Verzilli C, Gaunt TR, Pallas J, Lovering R, Li K, Casas JP, Sofat R, Kumari M, Rodriguez S, Johnson T, Newhouse SJ, Dominiczak A, Samani NJ, Caulfield M, Sever P, Stanton A, Shields DC, Padmanabhan S, Melander O, Hastie C, Delles C, Ebrahim S, Marmot MG, Smith GD, Lawlor DA, Munroe PB, Day IN, Kivimaki M, Whittaker J, Humphries SE, Hingorani AD", "protein_xref_pubmed", "19913121", "protein_xref_refseq", "NP_001139661" ], [ "Q9BUR4-1", "TDP-43 regulates site-specific 2'-O-methylation of U1 and U2 snRNAs via controlling the Cajal body localization of a subset of C/D scaRNAs.", "Nucleic acids research", "2019 Mar 18", "Izumikawa K, Nobe Y, Ishikawa H, Yamauchi Y, Taoka M, Sato K, Nakayama H, Simpson RJ, Isobe T, Takahashi N", "protein_xref_pubmed", "30759234", "protein_xref_refseq", "NP_001137463" ], [ "Q8NG31-1", "Characterization of the MLL partner gene AF15q14 involved in t(11;15)(q23;q14).", "Oncogene", "2003 Mar 6", "Kuefer MU, Chinwalla V, Zeleznik-Le NJ, Behm FG, Naeve CW, Rakestraw KM, Mukatira ST, Raimondi SC, Morris SW", "protein_xref_pubmed", "12618768", "protein_xref_refseq", "NP_653091" ], [ "Q8NG31-1", "A t(11;15) fuses MLL to two different genes, AF15q14 and a novel gene MPFYVE on chromosome 15.", "Oncogene", "2003 Mar 6", "Chinwalla V, Chien A, Odero M, Neilly MB, Zeleznik-Le NJ, Rowley JD", "protein_xref_pubmed", "12618766", "protein_xref_refseq", "NP_653091" ], [ "Q6UXB2-1", "CXCL17 is a mucosal chemokine elevated in idiopathic pulmonary fibrosis that exhibits broad antimicrobial activity.", "Journal of immunology (Baltimore, Md. : 1950)", "2012 Jun 15", "Burkhardt AM, Tai KP, Flores-Guiterrez JP, Vilches-Cisneros N, Kamdar K, Barbosa-Quintana O, Valle-Rios R, Hevezi PA, Zuniga J, Selman M, Ouellette AJ, Zlotnik A", "protein_xref_pubmed", "22611239", "protein_xref_refseq", "NP_940879" ], [ "Q92786-1", "Prox1 is differentially localized during lens development.", "Mechanisms of development", "2002 Mar", "Duncan MK, Cui W, Oh DJ, Tomarev SI", "protein_xref_pubmed", "11850194", "protein_xref_refseq", "NP_001257545" ], [ "O76050-1", "Fe65 negatively regulates Jagged1 signaling by decreasing Jagged1 protein stability through the E3 ligase Neuralized-like 1.", "Biochimica et biophysica acta", "2015 Nov", "Lee HJ, Yoon JH, Ahn JS, Jo EH, Kim MY, Lee YC, Kim JW, Ann EJ, Park HS", "protein_xref_pubmed", "26276215", "protein_xref_refseq", "NP_004201" ], [ "Q00341-1", "TSC2 Interacts with HDLBP/Vigilin and Regulates Stress Granule Formation.", "Molecular cancer research : MCR", "2021 Aug", "Kosmas K, Filippakis H, Khabibullin D, Turkiewicz M, Lam HC, Yu J, Kedersha NL, Anderson PJ, Henske EP", "protein_xref_pubmed", "33888601", "protein_xref_refseq", "NP_001307894" ], [ "P31947-1", "14-3-3Sigma is required to prevent mitotic catastrophe after DNA damage.", "Nature", "1999 Oct 7", "Chan TA, Hermeking H, Lengauer C, Kinzler KW, Vogelstein B", "protein_xref_pubmed", "10524633", "protein_xref_refseq", "NP_006133" ], [ "Q9UK53-1", "miR-24-3p promotes colon cancer progression by targeting ING1.", "Signal transduction and targeted therapy", "2020 Aug 25", "Gao Z, Zhou L, Hua S, Wu H, Luo L, Li L, Wang S, Liu Y, Zhou Z, Chen X", "protein_xref_pubmed", "32843621", "protein_xref_refseq", "NP_001254657" ], [ "Q5BKU9-1", "Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.", "PloS one", "2010 Sep 21", "Hendrickson SL, Lautenberger JA, Chinn LW, Malasky M, Sezgin E, Kingsley LA, Goedert JJ, Kirk GD, Gomperts ED, Buchbinder SP, Troyer JL, O'Brien SJ", "protein_xref_pubmed", "20877624", "protein_xref_refseq", "NP_001291924" ], [ "A0PJK1-1", "Functional characterisation of human SGLT-5 as a novel kidney-specific sodium-dependent sugar transporter.", "FEBS letters", "2012 Feb 3", "Grempler R, Augustin R, Froehner S, Hildebrandt T, Simon E, Mark M, Eickelmann P", "protein_xref_pubmed", "22212718", "protein_xref_refseq", "NP_001035915" ], [ "P63218-1", "Lysosomal chitobiase (CTB) and the G-protein gamma 5 subunit (GNG5) genes co-localize to human chromosome 1p22.", "Cytogenetics and cell genetics", "1995", "Ahmad W, Li S, Chen H, Tuck-Muller CM, Pittler SJ, Aronson NN Jr", "protein_xref_pubmed", "7606925", "protein_xref_refseq", "NP_005265" ], [ "Q96L91-1", "TIP60/P400/H4K12ac Plays a Role as a Heterochromatin Back-up Skeleton in Breast Cancer.", "Cancer genomics & proteomics", "2020 Nov-Dec", "Idrissou M, Boisnier T, Sanchez A, Khoufaf FZH, Penault-Llorca F, Bignon YJ, Bernard-Gallon D", "protein_xref_pubmed", "33099470", "protein_xref_refseq", "NP_056224" ], [ "Q9HC78-1", "Prediction of gastric cancer risk: association between ZBTB20 genetic variance and gastric cancer risk in Chinese Han population.", "Bioscience reports", "2020 Sep 30", "Bai F, Xiao K", "protein_xref_pubmed", "32936247", "protein_xref_refseq", "NP_001157814" ], [ "Q8N1B4-1", "The PI(4)P phosphatase Sac2 controls insulin granule docking and release.", "The Journal of cell biology", "2019 Nov 4", "Nguyen PM, Gandasi NR, Xie B, Sugahara S, Xu Y, Idevall-Hagren O", "protein_xref_pubmed", "31533953", "protein_xref_refseq", "NP_001276104" ], [ "P23582-1", "A novel variant of NPPC causes abnormal post-translational cleavage: A candidate gene for premature ovarian insufficiency.", "Maturitas", "2022 Mar", "Park JY, Go M, Lyu SW, Yoon TK, Kang KM, Kim JW, Shim SH", "protein_xref_pubmed", "35120671", "protein_xref_refseq", "NP_077720" ], [ "O94886-1", "Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.", "American journal of human genetics", "2009 Nov", "Talmud PJ, Drenos F, Shah S, Shah T, Palmen J, Verzilli C, Gaunt TR, Pallas J, Lovering R, Li K, Casas JP, Sofat R, Kumari M, Rodriguez S, Johnson T, Newhouse SJ, Dominiczak A, Samani NJ, Caulfield M, Sever P, Stanton A, Shields DC, Padmanabhan S, Melander O, Hastie C, Delles C, Ebrahim S, Marmot MG, Smith GD, Lawlor DA, Munroe PB, Day IN, Kivimaki M, Whittaker J, Humphries SE, Hingorani AD", "protein_xref_pubmed", "19913121", "protein_xref_refseq", "NP_055513" ], [ "Q9BRL6-1", "Characterization of SRp46, a novel human SR splicing factor encoded by a PR264/SC35 retropseudogene.", "Molecular and cellular biology", "1998 Aug", "Soret J, Gattoni R, Guyon C, Sureau A, Popielarz M, Le Rouzic E, Dumon S, Apiou F, Dutrillaux B, Voss H, Ansorge W, Stevenin J, Perbal B", "protein_xref_pubmed", "9671500", "protein_xref_refseq", "NP_115285" ], [ "Q9NRF8-1", "Low cytosine triphosphate synthase 2 expression renders resistance to 5-fluorouracil in colorectal cancer.", "Cancer biology & therapy", "2011 Mar 15", "Tan WL, Bhattacharya B, Loh M, Balasubramanian I, Akram M, Dong D, Wong L, Thakkar B, Salto-Tellez M, Soo RA, Fichtner I, Iacopetta B, Soong R", "protein_xref_pubmed", "21378502", "protein_xref_refseq", "NP_001137474" ], [ "P24864-1", "Cyclin ET, a new splice variant of human cyclin E with a unique expression pattern during cell cycle progression and differentiation.", "Nucleic acids research", "1997 Jun 1", "Mumberg D, Wick M, Burger C, Haas K, Funk M, Muller R", "protein_xref_pubmed", "9153308", "protein_xref_refseq", "NP_001229" ], [ "O95155-1", "The MPAC domain is a novel mitotically regulated domain, removed by apoptotic protease cleavage during cell death.", "Biochemical and biophysical research communications", "2006 Sep 8", "Spinette S, Mahoney JA, Rosen A", "protein_xref_pubmed", "16870146", "protein_xref_refseq", "NP_001099032" ], [ "Q49AH0-1", "Cerebral dopamine neurotrophic factor reduces alpha-synuclein aggregation and propagation and alleviates behavioral alterations in vivo.", "Molecular therapy : the journal of the American Society of Gene Therapy", "2021 Sep 1", "Albert K, Raymundo DP, Panhelainen A, Eesmaa A, Shvachiy L, Araujo GR, Chmielarz P, Yan X, Singh A, Cordeiro Y, Palhano FL, Foguel D, Luk KC, Domanskyi A, Voutilainen MH, Huttunen HJ, Outeiro TF, Saarma M, Almeida MS, Airavaara M", "protein_xref_pubmed", "33940158", "protein_xref_refseq", "NP_001025125" ], [ "Q9NQG6-1", "Human MIEF1 recruits Drp1 to mitochondrial outer membranes and promotes mitochondrial fusion rather than fission.", "The EMBO journal", "2011 Jun 24", "Zhao J, Liu T, Jin S, Wang X, Qu M, Uhlen P, Tomilin N, Shupliakov O, Lendahl U, Nister M", "protein_xref_pubmed", "21701560", "protein_xref_refseq", "NP_001291493" ], [ "Q8N6Y1-1", "PCDH20 functions as a tumour-suppressor gene through antagonizing the Wnt/beta-catenin signalling pathway in hepatocellular carcinoma.", "Journal of viral hepatitis", "2015 Feb", "Lv J, Zhu P, Yang Z, Li M, Zhang X, Cheng J, Chen X, Lu F", "protein_xref_pubmed", "24910204", "protein_xref_refseq", "NP_073754" ], [ "Q6ZMR5-1", "Modification of risk, but not survival of esophageal cancer patients by esophageal cancer-related gene 1 Arg290Gln polymorphism: a case-control study and meta-analysis.", "Journal of gastroenterology and hepatology", "2013 Nov", "Umar M, Upadhyay R, Kumar S, Ghoshal UC, Mittal B", "protein_xref_pubmed", "23869757", "protein_xref_refseq", "NP_872412" ], [ "Q5TA89-1", "Expression of differentiation associated protein Hes1 and Hes5 in cervical squamous carcinoma and its precursors.", "International journal of gynecological cancer : official journal of the International Gynecological Cancer Society", "2007 Nov-Dec", "Liu J, Ye F, Chen H, Lu W, Zhou C, Xie X", "protein_xref_pubmed", "17388915", "protein_xref_refseq", "NP_001010926" ], [ "P20749-1", "PCAT1 induced by transcription factor YY1 promotes cholangiocarcinoma proliferation, migration and invasion by sponging miR-216a-3p to up-regulate oncogene BCL3.", "Biological chemistry", "2021 Jan 27", "Sun D, Zhao Y, Wang W, Guan C, Hu Z, Liu L, Jiang X", "protein_xref_pubmed", "33544468", "protein_xref_refseq", "NP_005169" ], [ "P10632-1", "Roles of CYP3A4, CYP3A5 and CYP2C8 drug-metabolizing enzymes in cellular cytostatic resistance.", "Chemico-biological interactions", "2021 May 1", "Hofman J, Vagiannis D, Chen S, Guo L", "protein_xref_pubmed", "33775687", "protein_xref_refseq", "NP_001185782" ], [ "O43462-1", "MBTPS2, a membrane bound protease, underlying several distinct skin and bone disorders.", "Journal of translational medicine", "2021 Mar 20", "Caengprasath N, Theerapanon T, Porntaveetus T, Shotelersuk V", "protein_xref_pubmed", "33743732", "protein_xref_refseq", "NP_056968" ], [ "P41240-1", "Depletion of Csk preferentially reduces the protein level of LynA in a Cbl-dependent manner in cancer cells.", "Scientific reports", "2020 May 6", "Kuga T, Yamane Y, Hayashi S, Taniguchi M, Yamaguchi N, Yamagishi N", "protein_xref_pubmed", "32376886", "protein_xref_refseq", "NP_001120662" ], [ "Q99626-1", "Isolation, characterization, and chromosomal mapping of the human insulin promoter factor 1 (IPF-1) gene.", "Diabetes", "1996 Jun", "Inoue H, Riggs AC, Tanizawa Y, Ueda K, Kuwano A, Liu L, Donis-Keller H, Permutt MA", "protein_xref_pubmed", "8635654", "protein_xref_refseq", "NP_001256" ], [ "Q9NRR4-1", "p38 MAPK-mediated loss of nuclear RNase III enzyme Drosha underlies amyloid beta-induced neuronal stress in Alzheimer's disease.", "Aging cell", "2021 Oct", "Xu H, Liu X, Li W, Xi Y, Su P, Meng B, Shao X, Tang B, Yang Q, Mao Z", "protein_xref_pubmed", "34528746", "protein_xref_refseq", "NP_001093882" ], [ "Q8WXC3-1", "NMR assignment of human ASC2, a self contained protein interaction domain involved in apoptosis and inflammation.", "Journal of biomolecular NMR", "2002 Jun", "Espejo F, Green M, Preece NE, Assa-Munt N", "protein_xref_pubmed", "12153040", "protein_xref_refseq", "NP_690865" ], [ "Q6ZN28-1", "The Prognostic Significance of MACC1 Expression in Breast Cancer and Its Relationship to Immune Cells in the Tumor Microenvironment and Patient Survival.", "Medicina (Kaunas, Lithuania)", "2021 Sep 5", "Ali DA, El-Guindy DM, Elrashidy MA, Sabry NM, Kabel AM, Gaber RA, Ibrahim RR, Samy SM, Shalaby MM, Salama SA, Abdelhai D", "protein_xref_pubmed", "34577857", "protein_xref_refseq", "NP_877439" ], [ "Q9Y6C9-1", "The modified mitochondrial outer membrane carrier MTCH2 links mitochondrial fusion to lipogenesis.", "The Journal of cell biology", "2021 Nov 1", "Labbe K, Mookerjee S, Le Vasseur M, Gibbs E, Lerner C, Nunnari J", "protein_xref_pubmed", "34586346", "protein_xref_refseq", "NP_001304160" ], [ "Q9UHD2-1", "NAK is an IkappaB kinase-activating kinase.", "Nature", "2000 Apr 13", "Tojima Y, Fujimoto A, Delhase M, Chen Y, Hatakeyama S, Nakayama K, Kaneko Y, Nimura Y, Motoyama N, Ikeda K, Karin M, Nakanishi M", "protein_xref_pubmed", "10783893", "protein_xref_refseq", "NP_037386" ], [ "P05204-1", "Prolactin Drives a Dynamic STAT5A/HDAC6/HMGN2 Cis-Regulatory Landscape Exploitable in ER+ Breast Cancer.", "Endocrinology", "2021 May 1", "Craig JM, Turner TH, Harrell JC, Clevenger CV", "protein_xref_pubmed", "33589921", "protein_xref_refseq", "NP_005508" ], [ "Q8N584-1", "A genome-wide association study implicates that the TTC39C gene is associated with diabetic maculopathy with decreased visual acuity.", "Ophthalmic genetics", "2019 Jun", "Meng W, Chan BW, Ezeonwumelu C, Hebert HL, Campbell A, Soler V, Palmer CN", "protein_xref_pubmed", "31264924", "protein_xref_refseq", "NP_001129465" ], [ "Q15149-1", "Progress in epidermolysis bullosa: the phenotypic spectrum of plectin mutations.", "Experimental dermatology", "2005 Apr", "Pfendner E, Rouan F, Uitto J", "protein_xref_pubmed", "15810881", "protein_xref_refseq", "NP_000436" ], [ "Q8N488-1", "The nuclear localization sequence of the epigenetic factor RYBP binds to human importin alpha3.", "Biochimica et biophysica acta. Proteins and proteomics", "2021 Aug", "Neira JL, Jimenez-Alesanco A, Rizzuti B, Velazquez-Campoy A", "protein_xref_pubmed", "33945888", "protein_xref_refseq", "NP_036366" ], [ "Q15404-1", "Molecular basis for Ras suppressor-1 binding to PINCH-1 in focal adhesion assembly.", "The Journal of biological chemistry", "2021 Jan-Jun", "Fukuda K, Lu F, Qin J", "protein_xref_pubmed", "33891945", "protein_xref_refseq", "NP_036557" ], [ "P29803-1", "miR215p targets PDHA1 to regulate glycolysis and cancer progression in gastric cancer.", "Oncology reports", "2018 Nov", "Liu Z, Yu M, Fei B, Fang X, Ma T, Wang D", "protein_xref_pubmed", "30226598", "protein_xref_refseq", "NP_005381" ], [ "Q96QU1-1", "Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.", "Proceedings of the National Academy of Sciences of the United States of America", "2020 Oct 6", "Choudhary D, Narui Y, Neel BL, Wimalasena LN, Klanseck CF, De-la-Torre P, Chen C, Araya-Secchi R, Tamilselvan E, Sotomayor M", "protein_xref_pubmed", "32963095", "protein_xref_refseq", "NP_001136241" ], [ "Q9H4P4-1", "Comprehensive proteomic analysis of human Par protein complexes reveals an interconnected protein network.", "The Journal of biological chemistry", "2004 Mar 26", "Brajenovic M, Joberty G, Kuster B, Bouwmeester T, Drewes G", "protein_xref_pubmed", "14676191", "protein_xref_refseq", "NP_001229755" ], [ "O43447-1", "A cyclophilin functions in pre-mRNA splicing.", "The EMBO journal", "2002 Feb 1", "Horowitz DS, Lee EJ, Mabon SA, Misteli T", "protein_xref_pubmed", "11823439", "protein_xref_refseq", "NP_001317439" ], [ "Q8WVX9-1", "Mammalian wax biosynthesis. 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The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen. \n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - RefSeq\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the NCBI RefSeq gpff files to extract the publication information. The script also maps RefSeq accessions to the UniProtKB Canonical accessions. \n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: human_protein_blacklisted_pmids_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/compiled/human_protein_blacklisted_pmids_uniprotkb.csv\n Name: human_protein_function_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/reviewed/human_protein_function_refseq.csv\n Name: human_protein_xref_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/reviewed/human_protein_xref_refseq.csv\n Output Subdomain\n Name: human_protein_citations_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/reviewed/human_protein_citations_refseq.csv\n Name: human_protein_citations_refseq.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/reviewed/human_protein_citations_refseq.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"17957\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"81547\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"2882\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"8750\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"81049\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"81561\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"19891\"", "downloadurl": "/ln2data/releases/data/v-2.0.1/reviewed/human_protein_citations_refseq.csv" }