{
    "bcoid": "GLY_000235",
    "title": "Mouse Protein Citations (RefSeq)",
    "description": "The Mouse Protein Citations (RefSeq) datasets contains mouse [taxid:10090] UniProtKB accessions mapped ...",
    "filename": "mouse_protein_citations_refseq.csv",
    "filetype": "csv",
    "categories": {
        "species": "Mus musculus",
        "molecule": "Protein",
        "tags": "Protein Citations",
        "file_type": "csv",
        "status": "Reviewed",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "Q9CQN6-1...",
                "Discovery of..."
            ],
            [
                "E9Q5G7-1...",
                "Oogenesis sp..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                }
            ],
            [
                "Q9CQN6-1",
                "Discovery of genes essential for heme biosynthesis through large-scale gene expression analysis.",
                "Cell metabolism",
                "2009 Aug",
                "Nilsson R, Schultz IJ, Pierce EL, Soltis KA, Naranuntarat A, Ward DM, Baughman JM, Paradkar PN, Kingsley PD, Culotta VC, Kaplan J, Palis J, Paw BH, Mootha VK",
                "protein_xref_pubmed",
                "19656490",
                "protein_xref_refseq",
                "NP_079663"
            ],
            [
                "E9Q5G7-1",
                "Oogenesis specific genes (Nobox, Oct4, Bmp15, Gdf9, Oogenesin1 and Oogenesin2) are differentially expressed during natural and gonadotropin-induced mouse follicular development.",
                "Molecular reproduction and development",
                "2009 Oct",
                "Monti M, Redi C",
                "protein_xref_pubmed",
                "19480014",
                "protein_xref_refseq",
                "NP_848772"
            ],
            [
                "P34914-1",
                "Preservation of epoxyeicosatrienoic acid bioavailability prevents renal allograft dysfunction and cardiovascular alterations in kidney transplant recipients.",
                "Scientific reports",
                "2021 Feb 12",
                "Duflot T, Laurent C, Soudey A, Fonrose X, Hamzaoui M, Iacob M, Bertrand D, Favre J, Etienne I, Roche C, Coquerel D, Le Besnerais M, Louhichi S, Tarlet T, Li D, Brunel V, Morisseau C, Richard V, Joannides R, Stanke-Labesque F, Lamoureux F, Guerrot D, Bellien J",
                "protein_xref_pubmed",
                "33580125",
                "protein_xref_refseq",
                "NP_001258332"
            ],
            [
                "Q8BJ64-1",
                "Proteomic analysis of the mouse liver mitochondrial inner membrane.",
                "The Journal of biological chemistry",
                "2003 Oct 17",
                "Da Cruz S, Xenarios I, Langridge J, Vilbois F, Parone PA, Martinou JC",
                "protein_xref_pubmed",
                "12865426",
                "protein_xref_refseq",
                "NP_001129712"
            ],
            [
                "Q8BG51-1",
                "BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.",
                "Nucleic acids research",
                "2003 Jan 1",
                "Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE",
                "protein_xref_pubmed",
                "12520002",
                "protein_xref_refseq",
                "NP_001156826"
            ],
            [
                "Q8BK72-1",
                "BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.",
                "Nucleic acids research",
                "2003 Jan 1",
                "Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE",
                "protein_xref_pubmed",
                "12520002",
                "protein_xref_refseq",
                "NP_776118"
            ],
            [
                "Q9WUG6-1",
                "Liquid chromatography/mass spectrometry based detection and semi-quantitative analysis of INSL5 in human and murine tissues.",
                "Rapid communications in mass spectrometry : RCM",
                "2017 Dec 15",
                "Kay RG, Galvin S, Larraufie P, Reimann F, Gribble FM",
                "protein_xref_pubmed",
                "28857318",
                "protein_xref_refseq",
                "NP_001277577"
            ],
            [
                "P11499-1",
                "Cloning and nucleotide sequence of the murine hsp84 cDNA and chromosome assignment of related sequences.",
                "Gene",
                "1987",
                "Moore SK, Kozak C, Robinson EA, Ullrich SJ, Appella E",
                "protein_xref_pubmed",
                "2445630",
                "protein_xref_refseq",
                "NP_032328"
            ],
            [
                "P70227-1",
                "New molecular markers for the distal end of the t-complex and their relationships to mutations affecting mouse development.",
                "Genetics",
                "1992 May",
                "Ebersole T, Lai F, Artzt K",
                "protein_xref_pubmed",
                "1350556",
                "protein_xref_refseq",
                "NP_542120"
            ],
            [
                "P24860-1",
                "Effects of Ppargamma1 deletion on late-stage murine embryogenesis and cells that undergo endocycle.",
                "Developmental biology",
                "2021 Oct",
                "Nakano T, Aochi H, Hirasaki M, Takenaka Y, Fujita K, Tamura M, Soma H, Kamezawa H, Koizumi T, Shibuya H, Inomata R, Okuda A, Murakoshi T, Shimada A, Inoue I",
                "protein_xref_pubmed",
                "34246625",
                "protein_xref_refseq",
                "NP_758505"
            ],
            [
                "P46638-1",
                "Molecular analysis of mouse Rab11b: a new type of mammalian YPT/Rab protein.",
                "Genomics",
                "1994 Aug",
                "Lai F, Stubbs L, Artzt K",
                "protein_xref_pubmed",
                "8001972",
                "protein_xref_refseq",
                "NP_033023"
            ],
            [
                "Q9CX47-1",
                "XRCC2 mutation causes meiotic arrest, azoospermia and infertility.",
                "Journal of medical genetics",
                "2018 Sep",
                "Yang Y, Guo J, Dai L, Zhu Y, Hu H, Tan L, Chen W, Liang D, He J, Tu M, Wang K, Wu L",
                "protein_xref_pubmed",
                "30042186",
                "protein_xref_refseq",
                "NP_065595"
            ],
            [
                "P41230-1",
                "Identification of a mouse male-specific transplantation antigen, H-Y.",
                "Nature",
                "1995 Aug 24",
                "Scott DM, Ehrmann IE, Ellis PS, Bishop CE, Agulnik AI, Simpson E, Mitchell MJ",
                "protein_xref_pubmed",
                "7544442",
                "protein_xref_refseq",
                "NP_038696"
            ],
            [
                "P28474-1",
                "Cloning of the mouse class IV alcohol dehydrogenase (retinol dehydrogenase) cDNA and tissue-specific expression patterns of the murine ADH gene family.",
                "The Journal of biological chemistry",
                "1995 May 5",
                "Zgombic-Knight M, Ang HL, Foglio MH, Duester G",
                "protein_xref_pubmed",
                "7738026",
                "protein_xref_refseq",
                "NP_001275507"
            ],
            [
                "Q920Z0-1",
                "Co-duplication of olfactory receptor and MHC class I genes in the mouse major histocompatibility complex.",
                "Human molecular genetics",
                "2003 Nov 15",
                "Amadou C, Younger RM, Sims S, Matthews LH, Rogers J, Kumanovics A, Ziegler A, Beck S, Lindahl KF",
                "protein_xref_pubmed",
                "14506126",
                "protein_xref_refseq",
                "NP_667045"
            ],
            [
                "Q8BG32-1",
                "GINIP, a Galphai-interacting protein, functions as a key modulator of peripheral GABAB receptor-mediated analgesia.",
                "Neuron",
                "2014 Oct 1",
                "Gaillard S, Lo Re L, Mantilleri A, Hepp R, Urien L, Malapert P, Alonso S, Deage M, Kambrun C, Landry M, Low SA, Alloui A, Lambolez B, Scherrer G, Le Feuvre Y, Bourinet E, Moqrich A",
                "protein_xref_pubmed",
                "25242222",
                "protein_xref_refseq",
                "NP_848731"
            ],
            [
                "Q8VF40-1",
                "Analysis of Pax6 contiguous gene deletions in the mouse, Mus musculus, identifies regions distinct from Pax6 responsible for extreme small-eye and belly-spotting phenotypes.",
                "Genetics",
                "2009 Aug",
                "Favor J, Bradley A, Conte N, Janik D, Pretsch W, Reitmeir P, Rosemann M, Schmahl W, Wienberg J, Zaus I",
                "protein_xref_pubmed",
                "19474196",
                "protein_xref_refseq",
                "NP_666507"
            ],
            [
                "E9Q5I3-1",
                "The mouse Muc5b mucin gene: cDNA and genomic structures, chromosomal localization and expression.",
                "The Biochemical journal",
                "2002 May 1",
                "Escande F, Porchet N, Aubert JP, Buisine MP",
                "protein_xref_pubmed",
                "11964160",
                "protein_xref_refseq",
                "NP_083077"
            ],
            [
                "Q9D7V9-1",
                "Single-cell transcriptomic analysis of mouse neocortical development.",
                "Nature communications",
                "2019 Jan 11",
                "Loo L, Simon JM, Xing L, McCoy ES, Niehaus JK, Guo J, Anton ES, Zylka MJ",
                "protein_xref_pubmed",
                "30635555",
                "protein_xref_refseq",
                "NP_001157159"
            ],
            [
                "P07310-1",
                "Acetylation of muscle creatine kinase negatively impacts high-energy phosphotransfer in heart failure.",
                "JCI insight",
                "2021 Feb 8",
                "Walker MA, Chavez J, Villet O, Tang X, Keller A, Bruce JE, Tian R",
                "protein_xref_pubmed",
                "33554956",
                "protein_xref_refseq",
                "NP_031736"
            ],
            [
                "Q9EPK5-1",
                "TAZ interacts with TTF-1 and regulates expression of surfactant protein-C.",
                "The Journal of biological chemistry",
                "2004 Apr 23",
                "Park KS, Whitsett JA, Di Palma T, Hong JH, Yaffe MB, Zannini M",
                "protein_xref_pubmed",
                "14970209",
                "protein_xref_refseq",
                "NP_001161753"
            ],
            [
                "Q684R7-1",
                "Craniofacial consequences of connective tissue disorders in mice.",
                "Birth defects original article series",
                "1984",
                "Brown KS, Hetzel SC, Harne LC",
                "protein_xref_pubmed",
                "6391574",
                "protein_xref_refseq",
                "NP_001185740"
            ],
            [
                "P58391-1",
                "AMPK upregulates KCa2.3 channels and ameliorates endothelial dysfunction in diet-induced obese mice.",
                "Biochemical pharmacology",
                "2021 Jan",
                "Pang ZD, Wang Y, Song Z, She G, Ma XZ, Sun X, Wu W, Lai BC, Zhang J, Zhang Y, Du XJ, Shyy JYJ, Deng XL",
                "protein_xref_pubmed",
                "33186592",
                "protein_xref_refseq",
                "NP_536714"
            ],
            [
                "Q9CQH7-1",
                "Genomic analysis of mouse retinal development.",
                "PLoS biology",
                "2004 Sep",
                "Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL",
                "protein_xref_pubmed",
                "15226823",
                "protein_xref_refseq",
                "NP_081729"
            ],
            [
                "P59222-1",
                "The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.",
                "Nucleic acids research",
                "2014 Jan",
                "Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H, Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T, Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P, Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ, Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD, Flicek P, Skarnes WC, Mallon AM, Parkinson H",
                "protein_xref_pubmed",
                "24194600",
                "protein_xref_refseq",
                "NP_722485"
            ],
            [
                "Q6A068-1",
                "Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.",
                "Developmental cell",
                "2010 Apr 20",
                "Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P",
                "protein_xref_pubmed",
                "20412781",
                "protein_xref_refseq",
                "NP_690023"
            ],
            [
                "P30545-1",
                "Assignment of two alpha 2 adrenoceptor subtype genes to murine chromosomes.",
                "Neuroscience letters",
                "1994 Feb 14",
                "Chang NC, Jenkins NA, Gilbert DJ, Copeland NG, Chang YH, Chen WM, Chang AC",
                "protein_xref_pubmed",
                "8177505",
                "protein_xref_refseq",
                "NP_033763"
            ],
            [
                "Q80ZT2-1",
                "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.",
                "Proceedings of the National Academy of Sciences of the United States of America",
                "2002 Dec 24",
                "Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA",
                "protein_xref_pubmed",
                "12477932",
                "protein_xref_refseq",
                "NP_941068"
            ],
            [
                "Q9DAP7-1",
                "Loss of the histone chaperone ASF1B reduces female reproductive capacity in mice.",
                "Reproduction (Cambridge, England)",
                "2016 May",
                "Messiaen S, Guiard J, Aigueperse C, Fliniaux I, Tourpin S, Barroca V, Allemand I, Fouchet P, Livera G, Vernet M",
                "protein_xref_pubmed",
                "26850882",
                "protein_xref_refseq",
                "NP_077146"
            ],
            [
                "O88545-1",
                "IGF2BP2/IMP2-Deficient mice resist obesity through enhanced translation of Ucp1 mRNA and Other mRNAs encoding mitochondrial proteins.",
                "Cell metabolism",
                "2015 Apr 7",
                "Dai N, Zhao L, Wrighting D, Kramer D, Majithia A, Wang Y, Cracan V, Borges-Rivera D, Mootha VK, Nahrendorf M, Thorburn DR, Minichiello L, Altshuler D, Avruch J",
                "protein_xref_pubmed",
                "25863250",
                "protein_xref_refseq",
                "NP_036132"
            ],
            [
                "Q8VEL2-1",
                "Muscle-specific inositide phosphatase (MIP/MTMR14) is reduced with age and its loss accelerates skeletal muscle aging process by altering calcium homeostasis.",
                "Aging",
                "2010 Aug",
                "Romero-Suarez S, Shen J, Brotto L, Hall T, Mo C, Valdivia HH, Andresen J, Wacker M, Nosek TM, Qu CK, Brotto M",
                "protein_xref_pubmed",
                "20817957",
                "protein_xref_refseq",
                "NP_081125"
            ],
            [
                "Q8BS39-1",
                "Loss of function mutations in CCDC32 cause a congenital syndrome characterized by craniofacial, cardiac and neurodevelopmental anomalies.",
                "Human molecular genetics",
                "2020 Jun 3",
                "Harel T, Griffin JN, Arbogast T, Monroe TO, Palombo F, Martinelli M, Seri M, Pippucci T, Elpeleg O, Katsanis N",
                "protein_xref_pubmed",
                "32307552",
                "protein_xref_refseq",
                "NP_955014"
            ],
            [
                "Q9CQR4-1",
                "Interacting proteins dictate function of the minimal START domain phosphatidylcholine transfer protein/StarD2.",
                "The Journal of biological chemistry",
                "2007 Oct 19",
                "Kanno K, Wu MK, Agate DS, Fanelli BJ, Wagle N, Scapa EF, Ukomadu C, Cohen DE",
                "protein_xref_pubmed",
                "17704541",
                "protein_xref_refseq",
                "NP_080066"
            ],
            [
                "P24638-1",
                "Mutation in the gene encoding lysosomal acid phosphatase (Acp2) causes cerebellum and skin malformation in mouse.",
                "Neurogenetics",
                "2004 Dec",
                "Mannan AU, Roussa E, Kraus C, Rickmann M, Maenner J, Nayernia K, Krieglstein K, Reis A, Engel W",
                "protein_xref_pubmed",
                "15503243",
                "protein_xref_refseq",
                "NP_031413"
            ],
            [
                "L7N1X9-1",
                "cDNA cloning, sequencing and in situ localization of a transcript specific to both sublingual demilune cells and parotid intercalated duct cells in mouse salivary glands.",
                "Archives of oral biology",
                "1994 Dec",
                "Bekhor I, Wen Y, Shi S, Hsieh CH, Denny PA, Denny PC",
                "protein_xref_pubmed",
                "7717881",
                "protein_xref_refseq",
                "NP_064294"
            ],
            [
                "P41155-1",
                "Lymphotoxin beta, a novel member of the TNF family that forms a heteromeric complex with lymphotoxin on the cell surface.",
                "Cell",
                "1993 Mar 26",
                "Browning JL, Ngam-ek A, Lawton P, DeMarinis J, Tizard R, Chow EP, Hession C, O'Brine-Greco B, Foley SF, Ware CF",
                "protein_xref_pubmed",
                "7916655",
                "protein_xref_refseq",
                "NP_032544"
            ],
            [
                "Q80VH0-1",
                "ZFP521 contributes to pre-B-cell lymphomagenesis through modulation of the pre-B-cell receptor signaling pathway.",
                "Oncogene",
                "2016 Jun 23",
                "Hiratsuka T, Takei Y, Ohmori R, Imai Y, Ozeki M, Tamaki K, Haga H, Nakamura T, Tsuruyama T",
                "protein_xref_pubmed",
                "26522721",
                "protein_xref_refseq",
                "NP_001297678"
            ],
            [
                "Q8K441-1",
                "Evolutionary analysis of a cluster of ATP-binding cassette (ABC) genes.",
                "Mammalian genome : official journal of the International Mammalian Genome Society",
                "2003 Jan",
                "Annilo T, Chen ZQ, Shulenin S, Dean M",
                "protein_xref_pubmed",
                "12532264",
                "protein_xref_refseq",
                "NP_001160028"
            ],
            [
                "Q9ER60-1",
                "Sodium channel mutations in acetazolamide-responsive myotonia congenita, paramyotonia congenita, and hyperkalemic periodic paralysis.",
                "Neurology",
                "1994 Aug",
                "Ptacek LJ, Tawil R, Griggs RC, Meola G, McManis P, Barohn RJ, Mendell JR, Harris C, Spitzer R, Santiago F, et al.",
                "protein_xref_pubmed",
                "8058156",
                "protein_xref_refseq",
                "NP_573462"
            ],
            [
                "Q9Z0P5-1",
                "GPSM2-GNAI Specifies the Tallest Stereocilia and Defines Hair Bundle Row Identity.",
                "Current biology : CB",
                "2019 Mar 18",
                "Tadenev ALD, Akturk A, Devanney N, Mathur PD, Clark AM, Yang J, Tarchini B",
                "protein_xref_pubmed",
                "30827920",
                "protein_xref_refseq",
                "NP_036006"
            ],
            [
                "Q9JKK0-1",
                "Differential expression of members of the RCAN family of calcineurin regulators suggests selective functions for these proteins in the brain.",
                "The European journal of neuroscience",
                "2007 Sep",
                "Porta S, Marti E, de la Luna S, Arbones ML",
                "protein_xref_pubmed",
                "17767500",
                "protein_xref_refseq",
                "NP_075356"
            ],
            [
                "Q8BG21-1",
                "Flower-deficient mice have reduced susceptibility to skin papilloma formation.",
                "Disease models &amp; mechanisms",
                "2012 Jul",
                "Petrova E, Lopez-Gay JM, Rhiner C, Moreno E",
                "protein_xref_pubmed",
                "22362363",
                "protein_xref_refseq",
                "NP_001230168"
            ],
            [
                "Q8N9S3-1",
                "High-throughput discovery of novel developmental phenotypes.",
                "Nature",
                "2016 Sep 22",
                "Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bucan M, Murray SA",
                "protein_xref_pubmed",
                "27626380",
                "protein_xref_refseq",
                "NP_001277583"
            ],
            [
                "P31938-1",
                "The CL100 gene, which encodes a dual specificity (Tyr/Thr) MAP kinase phosphatase, is highly conserved and maps to human chromosome 5q34.",
                "Human genetics",
                "1994 May",
                "Emslie EA, Jones TA, Sheer D, Keyse SM",
                "protein_xref_pubmed",
                "8168826",
                "protein_xref_refseq",
                "NP_032953"
            ],
            [
                "O08856-1",
                "The little elongation complex regulates small nuclear RNA transcription.",
                "Molecular cell",
                "2011 Dec 23",
                "Smith ER, Lin C, Garrett AS, Thornton J, Mohaghegh N, Hu D, Jackson J, Saraf A, Swanson SK, Seidel C, Florens L, Washburn MP, Eissenberg JC, Shilatifard A",
                "protein_xref_pubmed",
                "22195968",
                "protein_xref_refseq",
                "NP_031950"
            ],
            [
                "Q8CIW6-1",
                "Molecular characterization of the murine Slc26a6 anion exchanger: functional comparison with Slc26a1.",
                "American journal of physiology. Renal physiology",
                "2002 Oct",
                "Xie Q, Welch R, Mercado A, Romero MF, Mount DB",
                "protein_xref_pubmed",
                "12217875",
                "protein_xref_refseq",
                "NP_599252"
            ],
            [
                "Q8BXB6-1",
                "Host genetic variation affects resistance to infection with a highly pathogenic H5N1 influenza A virus in mice.",
                "Journal of virology",
                "2009 Oct",
                "Boon AC, deBeauchamp J, Hollmann A, Luke J, Kotb M, Rowe S, Finkelstein D, Neale G, Lu L, Williams RW, Webby RJ",
                "protein_xref_pubmed",
                "19706712",
                "protein_xref_refseq",
                "NP_001239459"
            ],
            [
                "Q8BMS2-1",
                "The extracellular matrix protein mindin is a pattern-recognition molecule for microbial pathogens.",
                "Nature immunology",
                "2004 Jan",
                "He YW, Li H, Zhang J, Hsu CL, Lin E, Zhang N, Guo J, Forbush KA, Bevan MJ",
                "protein_xref_pubmed",
                "14691481",
                "protein_xref_refseq",
                "NP_598664"
            ],
            [
                "Q6P3E7-1",
                "Impaired Spermatogenesis, Muscle, and Erythrocyte Function in U12 Intron Splicing-Defective Zrsr1 Mutant Mice.",
                "Cell reports",
                "2018 Apr 3",
                "Horiuchi K, Perez-Cerezales S, Papasaikas P, Ramos-Ibeas P, Lopez-Cardona AP, Laguna-Barraza R, Fonseca Balvis N, Pericuesta E, Fernandez-Gonzalez R, Planells B, Viera A, Suja JA, Ross PJ, Alen F, Orio L, Rodriguez de Fonseca F, Pintado B, Valcarcel J, Gutierrez-Adan A",
                "protein_xref_pubmed",
                "29617656",
                "protein_xref_refseq",
                "NP_954668"
            ],
            [
                "Q9Z1M0-1",
                "The Improvement of Sepsis-Associated Encephalopathy by P2X7R Inhibitor through Inhibiting the Omi/HtrA2 Apoptotic Signaling Pathway.",
                "Behavioural neurology",
                "2022",
                "Wang K, Sun M, Juan Z, Zhang J, Sun Y, Wang G, Wang C, Li Y, Kong W, Fan L, Zhang Y, Zhao H, Zhao X",
                "protein_xref_pubmed",
                "35126784",
                "protein_xref_refseq",
                "NP_001033928"
            ],
            [
                "P50228-1",
                "Assignment of the mouse and cow CXC chemokine genes.",
                "Cytogenetics and cell genetics",
                "1998",
                "Modi WS, Amarante MR, Hanson M, Womack JE, Chidambaram A",
                "protein_xref_pubmed",
                "9730606",
                "protein_xref_refseq",
                "NP_033167"
            ],
            [
                "P54726-1",
                "Relative levels of the two mammalian Rad23 homologs determine composition and stability of the xeroderma pigmentosum group C protein complex.",
                "DNA repair",
                "2004 Oct 5",
                "Okuda Y, Nishi R, Ng JM, Vermeulen W, van der Horst GT, Mori T, Hoeijmakers JH, Hanaoka F, Sugasawa K",
                "protein_xref_pubmed",
                "15336624",
                "protein_xref_refseq",
                "NP_001284535"
            ],
            [
                "Q9ESZ8-1",
                "Mutant GTF2I induces cell transformation and metabolic alterations in thymic epithelial cells.",
                "Cell death and differentiation",
                "2020 Jul",
                "Kim IK, Rao G, Zhao X, Fan R, Avantaggiati ML, Wang Y, Zhang YW, Giaccone G",
                "protein_xref_pubmed",
                "32034314",
                "protein_xref_refseq",
                "NP_001074215"
            ],
            [
                "Q3UVR3-1",
                "Loss of zinc-finger protein 212 leads to Purkinje cell death and locomotive abnormalities with phospholipase D3 downregulation.",
                "Scientific reports",
                "2021 Nov 23",
                "Khang R, Jo A, Kang H, Kim H, Kwag E, Lee JY, Koo O, Park J, Kim HK, Jo DG, Hwang I, Ahn JY, Lee Y, Choi JY, Lee YS, Shin JH",
                "protein_xref_pubmed",
                "34815492",
                "protein_xref_refseq",
                "NP_001020027"
            ],
            [
                "O88322-1",
                "Laminins and Nidogens in the Pericellular Matrix of Chondrocytes: Their Role in Osteoarthritis and Chondrogenic Differentiation.",
                "The American journal of pathology",
                "2016 Feb",
                "Schminke B, Frese J, Bode C, Goldring MB, Miosge N",
                "protein_xref_pubmed",
                "26683663",
                "protein_xref_refseq",
                "NP_032721"
            ],
            [
                "Q9D780-1",
                "Identification and characterization of SF2000 and SF2001, two new members of the immune receptor SLAM/CD2 family.",
                "Immunogenetics",
                "2002 Feb",
                "Fraser CC, Howie D, Morra M, Qiu Y, Murphy C, Shen Q, Gutierrez-Ramos JC, Coyle A, Kingsbury GA, Terhorst C",
                "protein_xref_pubmed",
                "11862385",
                "protein_xref_refseq",
                "NP_083888"
            ],
            [
                "Q60837-1",
                "IL12Rbeta1DeltaTM is a secreted product of il12rb1 that promotes control of extrapulmonary tuberculosis.",
                "Infection and immunity",
                "2015 Feb",
                "Ray AA, Fountain JJ, Miller HE, Cooper AM, Robinson RT",
                "protein_xref_pubmed",
                "25404030",
                "protein_xref_refseq",
                "NP_032379"
            ],
            [
                "Q01514-1",
                "Decreased expression levels of Ifi genes is associated to the increased resistance to spontaneous arthritis disease in mice deficiency of IL-1RA.",
                "BMC immunology",
                "2016 Aug 2",
                "Liu X, Jiao Y, Cao Y, Deng N, Ma Y, Hasty KA, Kang A, Chen H, Stuart JM, Gu W",
                "protein_xref_pubmed",
                "27480124",
                "protein_xref_refseq",
                "NP_034389"
            ],
            [
                "Q6DIC6-1",
                "Significant differences between mouse and human trophinins are revealed by their expression patterns and targeted disruption of mouse trophinin gene.",
                "Biology of reproduction",
                "2002 Feb",
                "Nadano D, Sugihara K, Paria BC, Saburi S, Copeland NG, Gilbert DJ, Jenkins NA, Nakayama J, Fukuda MN",
                "protein_xref_pubmed",
                "11804944",
                "protein_xref_refseq",
                "NP_062421"
            ],
            [
                "P63028-1",
                "TCTP is Essential for Cell Proliferation and Survival during CNS Development.",
                "Cells",
                "2020 Jan 6",
                "Chen SH, Lu CH, Tsai MJ",
                "protein_xref_pubmed",
                "31935927",
                "protein_xref_refseq",
                "NP_033455"
            ],
            [
                "Q64GA5-1",
                "Induction of group IVC phospholipase A2 in allergic asthma: transcriptional regulation by TNFalpha in bronchoepithelial cells.",
                "The Biochemical journal",
                "2012 Feb 15",
                "Bickford JS, Newsom KJ, Herlihy JD, Mueller C, Keeler B, Qiu X, Walters JN, Su N, Wallet SM, Flotte TR, Nick HS",
                "protein_xref_pubmed",
                "22082005",
                "protein_xref_refseq",
                "NP_001004762"
            ],
            [
                "E9Q842-1",
                "The protomap is propagated to cortical plate neurons through an Eomes-dependent intermediate map.",
                "Proceedings of the National Academy of Sciences of the United States of America",
                "2013 Mar 5",
                "Elsen GE, Hodge RD, Bedogni F, Daza RA, Nelson BR, Shiba N, Reiner SL, Hevner RF",
                "protein_xref_pubmed",
                "23431145",
                "protein_xref_refseq",
                "NP_780481"
            ],
            [
                "Q5ND29-1",
                "Cystinosin, the small GTPase Rab11, and the Rab7 effector RILP regulate intracellular trafficking of the chaperone-mediated autophagy receptor LAMP2A.",
                "The Journal of biological chemistry",
                "2017 Jun 23",
                "Zhang J, Johnson JL, He J, Napolitano G, Ramadass M, Rocca C, Kiosses WB, Bucci C, Xin Q, Gavathiotis E, Cuervo AM, Cherqui S, Catz SD",
                "protein_xref_pubmed",
                "28465352",
                "protein_xref_refseq",
                "NP_001025109"
            ],
            [
                "Q0HA38-1",
                "Thm2 interacts with paralog, Thm1, and sensitizes to Hedgehog signaling in postnatal skeletogenesis.",
                "Cellular and molecular life sciences : CMLS",
                "2021 Apr",
                "Allard BA, Wang W, Pottorf TS, Mumtaz H, Jack BM, Wang HH, Silva LM, Jacobs DT, Wang J, Bumann EE, Tran PV",
                "protein_xref_pubmed",
                "33683377",
                "protein_xref_refseq",
                "NP_001277598"
            ],
            [
                "Q810M1-1",
                "Cloning of a new testis-enriched gene C4orf22 and its role in cell cycle and apoptosis in mouse spermatogenic cells.",
                "Molecular biology reports",
                "2019 Apr",
                "Li H, Dai Y, Luo Z, Nie D",
                "protein_xref_pubmed",
                "30820741",
                "protein_xref_refseq",
                "NP_001019785"
            ],
            [
                "Q80ZD9-1",
                "Alivin 1, a novel neuronal activity-dependent gene, inhibits apoptosis and promotes survival of cerebellar granule neurons.",
                "The Journal of neuroscience : the official journal of the Society for Neuroscience",
                "2003 Jul 2",
                "Ono T, Sekino-Suzuki N, Kikkawa Y, Yonekawa H, Kawashima S",
                "protein_xref_pubmed",
                "12843293",
                "protein_xref_refseq",
                "NP_001158035"
            ],
            [
                "P21129-1",
                "Unusual molecular characteristics of a repeat sequence island within a Giemsa-positive band on the mouse X chromosome.",
                "Proceedings of the National Academy of Sciences of the United States of America",
                "1990 Jan",
                "Nasir J, Fisher EM, Brockdorff N, Disteche CM, Lyon MF, Brown SD",
                "protein_xref_pubmed",
                "2296595",
                "protein_xref_refseq",
                "NP_001243033"
            ],
            [
                "Q62167-1",
                "The embryonic RNA helicase gene (ERH): a new member of the DEAD box family of RNA helicases.",
                "The Biochemical journal",
                "1995 Jun 15",
                "Sowden J, Putt W, Morrison K, Beddington R, Edwards Y",
                "protein_xref_pubmed",
                "8948440",
                "protein_xref_refseq",
                "NP_034158"
            ],
            [
                "Q80TS8-1",
                "Activin A Determines Steroid Levels and Composition in the Fetal Testis.",
                "Endocrinology",
                "2020 Jul 1",
                "Whiley PAF, O'Donnell L, Moody SC, Handelsman DJ, Young JC, Richards EA, Almstrup K, Western PS, Loveland KL",
                "protein_xref_pubmed",
                "32274496",
                "protein_xref_refseq",
                "NP_766298"
            ],
            [
                "Q7TPM9-1",
                "Promotion of somatic CAG repeat expansion by Fan1 knock-out in Huntington's disease knock-in mice is blocked by Mlh1 knock-out.",
                "Human molecular genetics",
                "2020 Nov 4",
                "Loupe JM, Pinto RM, Kim KH, Gillis T, Mysore JS, Andrew MA, Kovalenko M, Murtha R, Seong I, Gusella JF, Kwak S, Howland D, Lee R, Lee JM, Wheeler VC, MacDonald ME",
                "protein_xref_pubmed",
                "32876667",
                "protein_xref_refseq",
                "NP_766330"
            ],
            [
                "P33146-1",
                "The gene for the cell adhesion molecule M-cadherin maps to mouse chromosome 8 and human chromosome 16q24.1-qter and is near the E-cadherin (uvomorulin) locus in both species.",
                "Genomics",
                "1992 Oct",
                "Kaupmann K, Becker-Follmann J, Scherer G, Jockusch H, Starzinski-Powitz A",
                "protein_xref_pubmed",
                "1427864",
                "protein_xref_refseq",
                "NP_031688"
            ],
            [
                "Q91VU8-1",
                "Novel cDNA clones obtained by antibody screening of a mouse cerebellar cDNA expression library.",
                "Brain research. Molecular brain research",
                "1994 Sep",
                "Kambouris M, Triarhou LC, Dlouhy SR, Sangameswaran L, Luo F, Ghetti B, Hodes ME",
                "protein_xref_pubmed",
                "7808216",
                "protein_xref_refseq",
                "NP_598710"
            ],
            [
                "Q8CGM1-1",
                "Whole exome sequencing reveals a functional mutation in the GAIN domain of the Bai2 receptor underlying a forward mutagenesis hyperactivity QTL.",
                "Mammalian genome : official journal of the International Mammalian Genome Society",
                "2017 Dec",
                "Speca DJ, Trimmer JS, Peterson AS, Diaz E",
                "protein_xref_pubmed",
                "28894906",
                "protein_xref_refseq",
                "NP_001277643"
            ],
            [
                "P97873-1",
                "Elastin homeostasis is altered with pelvic organ prolapse in cultures of vaginal cells from a lysyl oxidase-like 1 knockout mouse model.",
                "Physiological reports",
                "2020 Jun",
                "Jameson SA, Swaminathan G, Dahal S, Couri B, Kuang M, Rietsch A, Butler RS, Ramamurthi A, Damaser MS",
                "protein_xref_pubmed",
                "32533648",
                "protein_xref_refseq",
                "NP_034859"
            ],
            [
                "Q8BKG4-1",
                "Analysis of Fz10 expression in mouse embryos.",
                "Development genes and evolution",
                "2004 Mar",
                "Nunnally AP, Parr BA",
                "protein_xref_pubmed",
                "14758554",
                "protein_xref_refseq",
                "NP_780493"
            ],
            [
                "Q5HZI1-1",
                "MTUS1 silencing promotes E-selectin production through p38 MAPK-dependent CREB ubiquitination in endothelial cells.",
                "Journal of molecular and cellular cardiology",
                "2016 Dec",
                "Wang Y, Dai X, Liu Y, Li J, Liu Z, Yin P, Chen J, Wang Y, Wang N, Zhang P",
                "protein_xref_pubmed",
                "27789289",
                "protein_xref_refseq",
                "NP_001005863"
            ],
            [
                "Q62189-1",
                "A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.",
                "BMC developmental biology",
                "2005 Jul 20",
                "McKee AE, Minet E, Stern C, Riahi S, Stiles CD, Silver PA",
                "protein_xref_pubmed",
                "16033648",
                "protein_xref_refseq",
                "NP_001040102"
            ],
            [
                "Q8R4A3-1",
                "Dapper, a Dishevelled-associated antagonist of beta-catenin and JNK signaling, is required for notochord formation.",
                "Developmental cell",
                "2002 Apr",
                "Cheyette BN, Waxman JS, Miller JR, Takemaru K, Sheldahl LC, Khlebtsova N, Fox EP, Earnest T, Moon RT",
                "protein_xref_pubmed",
                "11970895",
                "protein_xref_refseq",
                "NP_067507"
            ],
            [
                "Q8BVA2-1",
                "Genomic analysis of mouse retinal development.",
                "PLoS biology",
                "2004 Sep",
                "Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL",
                "protein_xref_pubmed",
                "15226823",
                "protein_xref_refseq",
                "NP_079943"
            ],
            [
                "Q8BHJ5-1",
                "TBL1XR1 Mutations Drive Extranodal Lymphoma by Inducing a Pro-tumorigenic Memory Fate.",
                "Cell",
                "2020 Jul 23",
                "Venturutti L, Teater M, Zhai A, Chadburn A, Babiker L, Kim D, Beguelin W, Lee TC, Kim Y, Chin CR, Yewdell WT, Raught B, Phillip JM, Jiang Y, Staudt LM, Green MR, Chaudhuri J, Elemento O, Farinha P, Weng AP, Nissen MD, Steidl C, Morin RD, Scott DW, Prive GG, Melnick AM",
                "protein_xref_pubmed",
                "32619424",
                "protein_xref_refseq",
                "NP_109657"
            ],
            [
                "P63139-1",
                "One subunit of the transcription factor NF-Y maps close to the major histocompatibility complex in murine and human chromosomes.",
                "Genomics",
                "1991 Nov",
                "Li XY, Mattei MG, Zaleska-Rutczynska Z, Hooft van Huijsduijnen R, Figueroa F, Nadeau J, Benoist C, Mathis D",
                "protein_xref_pubmed",
                "1774067",
                "protein_xref_refseq",
                "NP_035044"
            ],
            [
                "P30306-1",
                "The Cdc25 genes map to mouse chromosomes 2, 9, and 18.",
                "Mammalian genome : official journal of the International Mammalian Genome Society",
                "1996 Oct",
                "Lock LF, Wickramasinghe D, Ernst MK, Gilbert DJ, Copeland NG, Jenkins NA, Donovan PJ",
                "protein_xref_pubmed",
                "8854867",
                "protein_xref_refseq",
                "NP_075606"
            ],
            [
                "O70348-1",
                "Organizations and gene duplications of the human and mouse MHC complement gene clusters.",
                "Experimental and clinical immunogenetics",
                "2000",
                "Yang Z, Yu CY",
                "protein_xref_pubmed",
                "10686478",
                "protein_xref_refseq",
                "NP_001157242"
            ],
            [
                "E9Q046-1",
                "Molecular structure of Tcp-10 genes from the t complex responder locus.",
                "Mammalian genome : official journal of the International Mammalian Genome Society",
                "1991",
                "Bullard DC, Schimenti JC",
                "protein_xref_pubmed",
                "1794051",
                "protein_xref_refseq",
                "NP_001161050"
            ]
        ]
    },
    "readme": "Name\n   - Mouse Protein Citations (RefSeq)\n\nVersion\n   - v-x.x.x\n\nCreated on\n  - 2019-09-06T14:06:38.962804\n\nModified on\n   - 2022-01-19T12:33:03.804397\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n   - Not Applicable []\n\nChecksum\n   - \n\nUsability Domain\n   - The Mouse Protein Citations (RefSeq) datasets contains mouse [taxid:10090] UniProtKB accessions mapped to publication information (PMID, title, journal name, publication, date, authors of corresponding RefSeq accessions). The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen. \n\nDescription Domain\n   Keywords\n   - PMID\n   - journal\n   - citations\n   - authors\n   - RefSeq\n   - PubMed\n\n   Pipeline Steps\n   - Step-1: The script parses the NCBI RefSeq gpff files to extract the publication information. The script also maps RefSeq accessions to the UniProtKB Canonical accessions. \n\nExecution Domain\n   Scripts   - https://github.com/glygener/glygen-backend-integration/blob/master/dataset-maker/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: mouse_protein_blacklisted_pmids_uniprotkb.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/compiled/mouse_protein_blacklisted_pmids_uniprotkb.csv\n      Name: mouse_protein_function_refseq.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/reviewed/mouse_protein_function_refseq.csv\n      Name: mouse_protein_xref_refseq.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/reviewed/mouse_protein_xref_refseq.csv\n   Output Subdomain\n      Name: mouse_protein_citations_refseq.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/reviewed/mouse_protein_citations_refseq.csv\n      Name: mouse_protein_citations_refseq.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-2.0.1/reviewed/mouse_protein_citations_refseq.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"18155\"\n      Name: \"title\"\n     Description: \"Title of the published article in the journal\"\n      Unique Values: \"52694\"\n      Name: \"journal_name\"\n     Description: \"The name of the journal in which the article is published\"\n      Unique Values: \"1724\"\n      Name: \"publication_date\"\n     Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n      Unique Values: \"7704\"\n      Name: \"authors\"\n     Description: \"NA\"\n      Unique Values: \"52389\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"52697\"\n      Name: \"src_xref_key\"\n     Description: \"Source Xref  key\"\n      Unique Values: \"1\"\n      Name: \"src_xref_id\"\n     Description: \"Source X-ref ID\"\n      Unique Values: \"20169\"",
    "downloadurl": "/ln2data/releases/data/v-2.0.1/reviewed/mouse_protein_citations_refseq.csv"
}
