{ "uniprot_canonical_ac": "A0A0G2JTP0-1", "ptm_annotation": [], "sequence": { "header": "tr|A0A0G2JTP0-1|A0A0G2JTP0_RAT Isoform 1 of RCG47924, isoform CRA_a OS=Rattus norvegicus OX=10116 GN=Dnajc4 PE=4 SV=1 CANONICAL=A0A0G2JTP0-1", "length": 244, "sequence": "MPSLLLRLPLRLCRLWPCSPPTRLLTAATGQRPVPTNYYELLGVHPGASAEEIKRAFFTKSKELHPDRDPGNPALHSRFVELSEAYRVLSREESRRNYDHQLHSASPSKSSGSTAEPKYKQQTHSSPWETPNAEYWAQFHSVRPQEPESRKQQHKHNQRVLGYCLLLMVAGMGLHYVAFRKLEQVHRSFMDEKDRIITAIYNDTRARARANRARIQQKHQQRQPPTEPSLPPESSRIMPQDTSQ" }, "uniprot_id": "", "enzyme_annotation": [], "glycation": [], "keywords": [], "species": [ { "common_name": "Rat", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0", "id": "A0A0G2JTP0", "database": "UniProtKB" } ], "name": "Rattus norvegicus", "taxid": 10116 } ], "go_annotation": { "categories": [ { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016021", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0", "id": "A0A0G2JTP0", "database": "UniProtKB" } ], "name": "integral component of membrane", "id": "GO:0016021" } ], "total": 1, "name": "Cellular Component" } ] }, "publication": [ { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/12477932", "type": "PubMed", "id": "12477932" } ], "title": "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013214.1", "id": "NP_001013214.1", "database": "RefSeq" } ], "authors": "Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA", "date": "2002" } ], "uniprot_ac": "A0A0G2JTP0", "gene_names": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/A0A0G2JTP0", "type": "synonym", "resource": "RefSeq", "name": "Dnajc4" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0", "type": "recommended", "resource": "UniProtKB", "name": "Dnajc4" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0", "type": "synonym", "resource": "UniProtKB", "name": "rCG_47924" } ], "reactions": [], "isoforms": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0#A0A0G2JTP0-1", "isoform_ac": "A0A0G2JTP0-1", "locus": { "end_pos": 222242980, "strand": "+", "start_pos": 222246749, "chromosome": "1", "evidence": [ { "url": "https://www.ensembl.org/id/ENSRNOT00000087285", "id": "ENSRNOT00000087285", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSRNOP00000068786", "id": "ENSRNOP00000068786", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "tr|A0A0G2JTP0-1|A0A0G2JTP0_RAT Isoform 1 of RCG47924, isoform CRA_a OS=Rattus norvegicus OX=10116 GN=Dnajc4 PE=4 SV=1 CANONICAL=A0A0G2JTP0-1", "length": 244, "sequence": "MPSLLLRLPLRLCRLWPCSPPTRLLTAATGQRPVPTNYYELLGVHPGASAEEIKRAFFTKSKELHPDRDPGNPALHSRFVELSEAYRVLSREESRRNYDHQLHSASPSKSSGSTAEPKYKQQTHSSPWETPNAEYWAQFHSVRPQEPESRKQQHKHNQRVLGYCLLLMVAGMGLHYVAFRKLEQVHRSFMDEKDRIITAIYNDTRARARANRARIQQKHQQRQPPTEPSLPPESSRIMPQDTSQ" } }, { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0#Q5M867-1", "isoform_ac": "Q5M867-1", "locus": { "end_pos": 222242980, "strand": "+", "start_pos": 222246345, "chromosome": "1", "evidence": [ { "url": "https://www.ensembl.org/id/ENSRNOT00000028731", "id": "ENSRNOT00000028731", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSRNOP00000028731", "id": "ENSRNOP00000028731", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "tr|Q5M867-1|A0A0G2JTP0_RAT Computationally mapped isoform of RCG47924, isoform CRA_a OS=Rattus norvegicus OX=10116 GN=Dnajc4 PE=4 SV=1 CANONICAL=A0A0G2JTP0-1", "length": 238, "sequence": "MLVRRNEVRHGNLPFPLRWSFPMLPRPVPTNYYELLGVHPGASAEEIKRAFFTKSKELHPDRDPGNPALHSRFVELSEAYRVLSREESRRNYDHQLHSASPSKSSGSTAEPKYKQQTHSSPWETPNAEYWAQFHSVRPQEPESRKQQHKHNQRVLGYCLLLMVAGMGLHYVAFRKLEQVHRSFMDEKDRIITAIYNDTRARARANRARIQQKHQQRQPPTEPSLPPESSRIMPQDTSQ" } } ], "pathway": [ { "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:361717", "resource": "KEGG Pathway", "id": "rno:361717", "name": "" } ], "reaction_participants": [], "function": [], "orthologs": [ { "uniprot_canonical_ac": "Q9D844-1", "protein_name": "DnaJ homolog subfamily C member 4", "sequence": { "length": 244, "sequence": "MPSLLLQLPLRLCRLWPHSLSIRLLTAATGQRSVPTNYYELLGVHPGASAEEIKRAFFTKSKELHPDRDPGNPALHSRFVELNEAYRVLSREESRRNYDHQLHSASPPKSSGSTAEPKYTQQTHSSWEPPNAQYWAQFHSVRPQGPESRKQQRKHNQRVLGYCLLLMVAGMGLHYVAFRKLEQVHRSFMDEKDRIITAIYNDTRARARANRARIQQERQQRQQPRAEPSLPPESSRIMPQDTSP" }, "evidence": [ { "url": "http://www.informatics.jax.org/homology/73264", "id": "73264", "database": "MGI" } ], "common_name": "Mouse", "organism": "Mus musculus", "gene_name": "Dnajc4", "tax_id": 10090 }, { "uniprot_canonical_ac": "Q9NNZ3-1", "protein_name": "DnaJ homolog subfamily C member 4", "sequence": { "length": 241, "sequence": "MPPLLPLRLCRLWPRNPPSRLLGAAAGQRSRPSTYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHSRFVELSEAYRVLSREQSRRSYDDQLRSGSPPKSPRTTVHDKSAHQTHSSWTPPNAQYWSQFHSVRPQGPQLRQQQHKQNKQVLGYCLLLMLAGMGLHYIAFRKVKQMHLNFMDEKDRIITAFYNEARARARANRGILQQERQRLGQRQPPPSEPTQGPEIVPRGAGP" }, "evidence": [ { "url": "http://www.informatics.jax.org/homology/73264", "id": "73264", "database": "MGI" } ], "common_name": "Human", "organism": "Homo sapiens", "gene_name": "DNAJC4", "tax_id": 9606 } ], "interactions": [], "synthesized_glycans": [], "snv": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.mgi", "label": "MGI Homologs" } ], "refseq": { "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006230922.1", "ac": "XP_006230922.1", "name": "dnaJ homolog subfamily C member 4 isoform X3", "summary": "" }, "reaction_enzymes": [], "site_annotation": [ { "end_pos": 204, "annotation": "n_glycosylation_sequon", "start_pos": 202 } ], "pro_annotation": [], "crossref": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSRNOG00000043060", "id": "ENSRNOG00000043060", "database": "Bgee" }, { "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06257", "id": "cd06257", "database": "CDD" }, { "url": "https://www.ncbi.nlm.nih.gov/gene/361717", "id": "361717", "database": "GeneID" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR001623", "id": "IPR001623", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "id": "IPR036869", "database": "InterPro" }, { "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:361717", "id": "rno:361717", "database": "KEGG Pathway" }, { "url": "https://omabrowser.org/oma/group/GLHYAAF/", "id": "GLHYAAF", "database": "OMA" }, { "url": "http://www.orthodb.org/?query=1330473at2759", "id": "1330473at2759", "database": "OrthoDB" }, { "url": "http://pfam.xfam.org/family/PF00226", "id": "PF00226", "database": "Pfam" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013214", "id": "NP_001013214", "database": "RefSeq" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013214.1", "id": "NP_001013214.1", "database": "RefSeq" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006230922", "id": "XP_006230922", "database": "RefSeq" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006230922.1", "id": "XP_006230922.1", "database": "RefSeq" }, { "url": "http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=1308693", "id": "1308693", "database": "RGD" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0", "id": "A0A0G2JTP0", "database": "UniProtKB" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0-1", "id": "A0A0G2JTP0-1", "database": "UniProtKB" }, { "url": "https://www.uniprot.org/uniprot/Q5M867", "id": "Q5M867", "database": "UniProtKB" }, { "url": "https://www.uniprot.org/uniprot/Q5M867-1", "id": "Q5M867-1", "database": "UniProtKB" } ], "expression_disease": [], "glycosylation": [], "mutagenesis": [], "disease": [], "phosphorylation": [], "mass": { "monoisotopic_mass": 28191.0, "chemical_mass": 28191.0 }, "expression_tissue": [], "gene": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0", "name": "Dnajc4", "locus": { "end_pos": 222242858, "strand": "-", "start_pos": 222246768, "chromosome": "1", "evidence": [ { "url": "https://www.ensembl.org/id/ENSRNOG00000043060", "id": "ENSRNOG00000043060", "database": "Ensembl Gene" } ] } } ], "protein_names": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/A0A0G2JTP0", "type": "synonym", "resource": "RefSeq", "name": "DnaJ (Hsp40) homolog, subfamily C, member 4" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0#names_and_taxonomy", "type": "synonym", "resource": "UniProtKB", "name": "DnaJ (Hsp40) homolog, subfamily C, member 4" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0#names_and_taxonomy", "type": "synonym", "resource": "UniProtKB", "name": "DnaJ heat shock protein family (Hsp40) member C4" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2JTP0#names_and_taxonomy", "type": "synonym", "resource": "UniProtKB", "name": "RCG47924, isoform CRA_a" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/A0A0G2JTP0", "type": "synonym", "resource": "RefSeq", "name": "dnaJ homolog subfamily C member 4 isoform X3" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/A0A0G2JTP0", "type": "synonym", "resource": "RefSeq", "name": "dnaJ homolog subfamily C member 4" } ] }