{ "bcoid": "GLY_000538", "title": "Asparagine-Linked Glycans (PMID30745240) [NCFG] citations.", "description": "The dataset provides citations for the associated glycan (GlyTouCan Accession) from dataset http://data.glygen.org/GLY_000528. ", "filename": "glycan_citations_ncfg.csv", "filetype": "csv", "categories": { "molecule": "Glycan", "tags": "Citations", "status": "Reviewed", "file_type": "csv", "scope": "internal" }, "minitable": { "content": [ [ "G39213VZ...", "Unique Bindi..." ], [ "G29011JC...", "Unique Bindi..." ] ], "headers": [ "glytoucan_ac...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "glytoucan_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "G39213VZ", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G29011JC", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G10219AA", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G20030CU", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G80858MF", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G61207RZ", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G80393PG", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G00176HZ", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G36191CD", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G29857RC", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G79809MM", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G18938DW", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G78059CC", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G86357DX", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G45359RY", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G63889NK", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G77252PU", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G78030KJ", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G98366ZJ", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G56318NV", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G17689DH", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G91413ZX", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G45209NR", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G94531EZ", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G84467IZ", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G66665YI", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G25505UF", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G15998WM", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G56749GV", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G19444JC", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G39018CC", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G99533GU", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G22768VO", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G13974DV", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G10179FS", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G09675DY", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G48154LM", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ], [ "G87356FF", "Unique Binding Specificities of Proteins toward Isomeric Asparagine-Linked Glycans.", "Cell chemical biology", "2019 Apr 18", "Gao C, Hanes MS, Byrd-Leotis LA, Wei M, Jia N, Kardish RJ, McKitrick TR, Steinhauer DA, Cummings RD", "glycan_xref_pubmed", "30745240", "glycan_xref_glygen_ds", "GLY_000528" ] ] }, "readme": "Name\n - Asparagine-Linked Glycans (PMID30745240) [NCFG] citations.\n\nVersion\n - 1.8.25\n\nCreated on\n - 2021-01-04T15:07:01.965445\n\nModified on\n - 2021-01-08T13:57:22.959916\n\nCreated by\n - Rahi Navelkar [rsn13@gwu.edu], Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nUsability Domain\n - The dataset provides citations for the associated glycan (GlyTouCan Accession) from dataset http://data.glygen.org/GLY_000528.\n\nDescription Domain\n Keywords\n - Glycan\n - GlyTouCan Accession\n - Citations\n - NCFG\n\n Pipeline Steps\n - Step-1: The input file was downloaded from the author and a python script is used to extract the data for the GlyTouCan accessions based on the acession master list. Refer to the usability domain for more information on master list.\n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-glycan-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: glycan_evidence_ncfg.csv\n URI: https://data.glygen.org/ln2wwwdata/reviewed/glycan_evidence_ncfg.csv\n Output Subdomain\n Name: glycan_citations_ncfg.csv\n URI: http://data.glygen.org/ln2wwwdata/reviewed/glycan_citations_ncfg.csv\n Name: glycan_citations_ncfg.stat.csv\n URI: http://data.glygen.org/ln2wwwdata/reviewed/glycan_citations_ncfg.stat.csv\n\nFields\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"119\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"119\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"120\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"49\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"118\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"117\"\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"115\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-1.8.25/reviewed/glycan_citations_ncfg.csv" }