{
    "bcoid": "GLY_000278",
    "title": "Rat EBI-UniProtKB NT file",
    "description": "The Rat EBI-UniProtKB NT file contains proteome data for rat [taxid:10116] from UniProtKB and other EMBL-EBI ...",
    "filename": "rat_protein_ntdata.nt",
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    "categories": {
        "species": "Rattus norvegicus",
        "molecule": "Protein",
        "tags": "EMBL-EBI-GlyGen-NT File",
        "file_type": "nt",
        "status": "Reviewed",
        "scope": "internal"
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    "readme": "Name\n   - Rat EBI-UniProtKB NT file\n\nVersion\n   - 1.8.25\n\nCreated on\n  - 2019-09-06T17:38:32.808468\n\nModified on\n   - 2020-04-10T12:11:34.024096\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Rat EBI-UniProtKB NT file contains proteome data for rat [taxid:10116] from UniProtKB and other EMBL-EBI resources as per the GlyGen specifications in the NT format The dataset is derived from 2019-09 UniProt release. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - NT\n   - proteome\n   - EMBL-EBI\n\n   Pipeline Steps\n   - Step-0: The NT file requires no processing after it is recieved from EMBL-EBI-UniProtKB\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-rattus-norvegicus.nt\n      URI: https://data.glygen.org/ln2wwwdata/source/uniprot-proteome-rattus-norvegicus.nt\n   Output Subdomain\n      Name: rat_protein_ntdata.nt\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/rat_protein_ntdata.nt\n      Name: rat_protein_ntdata.stat.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/rat_protein_ntdata.stat.csv\n\nFields\n      Name: \"src_xref_key\"\n     Description: \"Source Xref  key\"\n      Unique Values: \"1\"\n      Name: \"xref_id\"\n     Description: \"ID of the X-ref\"\n      Unique Values: \"119\"\n      Name: \"title\"\n     Description: \"Title of the published article in the journal\"\n      Unique Values: \"119\"\n      Name: \"src_xref_id\"\n     Description: \"Source X-ref ID\"\n      Unique Values: \"120\"\n      Name: \"journal_name\"\n     Description: \"The name of the journal in which the article is published\"\n      Unique Values: \"49\"\n      Name: \"authors\"\n     Description: \"NA\"\n      Unique Values: \"118\"\n      Name: \"publication_date\"\n     Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n      Unique Values: \"117\"\n      Name: \"glytoucan_ac\"\n     Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n      Unique Values: \"115\"\n      Name: \"xref_key\"\n     Description: \"Source key associated to the  xref_id\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-1.8.25/reviewed/rat_protein_ntdata.nt"
}