{ "bcoid": "GLY_000521", "title": "Rat Phosphorylation Sites (iPTMnet)", "description": "", "filename": "rat_proteoform_phosphorylation_sites_iptmnet.csv", "filetype": "csv", "categories": { "species": "Rattus norvegicus", "molecule": "Protein", "tags": "Phosphorylation Sites (iPTMnet)", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "O08838-1...", "250..." ], [ "O08838-1...", "250..." ] ], "headers": [ "uniprotkb_ca...", "phosphorylat..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "phosphorylation_site_uniprotkb" }, { "type": "string", "label": "amino_acid" }, { "type": "string", "label": "kinase_uniprotkb_canonical_ac" }, { "type": "string", "label": "kinase_gene_name" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "O08838-1", "250", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "250", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "252", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "252", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "262", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "262", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "268", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "268", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "272", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "272", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "276", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "276", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "285", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "285", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "293", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "293", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "496", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "496", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "514", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "514", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "539", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "539", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "626", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "626", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "310", "Thr", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08838", "protein_xref_iptmnet", "O08838" ], [ "O08838-1", "310", "Thr", "Q703I1-1", "Oser1", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08874-1", "952", "Thr", "Q703I1-1", "Oser1", "protein_xref_pelm", "O08874", "protein_xref_iptmnet", "O08874" ], [ "O08874-1", "952", "Thr", "Q703I1-1", "Oser1", "protein_xref_pubmed", "10753910", "protein_xref_iptmnet", "O08874" ], [ "O35147-1", "129", "Ser", "P39951-1", "Cdk1", "protein_xref_pelm", "O35147", "protein_xref_iptmnet", "O35147" ], [ "O35147-1", "129", "Ser", "P39951-1", "Cdk1", "protein_xref_pubmed", "12049737", "protein_xref_iptmnet", "O35147" ], [ "O35254-1", "216", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35254", "protein_xref_iptmnet", "O35254" ], [ "O35254-1", "216", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35254" ], [ "O35254-1", "220", "Thr", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35254", "protein_xref_iptmnet", "O35254" ], [ "O35254-1", "220", "Thr", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35254" ], [ "O35274-1", "100", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35274", "protein_xref_iptmnet", "O35274" ], [ "O35274-1", "100", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "15228588", "protein_xref_iptmnet", "O35274" ], [ "O35274-1", "116", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35274", "protein_xref_iptmnet", "O35274" ], [ "O35274-1", "116", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "15228588", "protein_xref_iptmnet", "O35274" ], [ "O35303-1", "635", "Ser", "P39951-1", "Cdk1", "protein_xref_pelm", "O35303", "protein_xref_iptmnet", "O35303" ], [ "O35303-1", "635", "Ser", "P39951-1", "Cdk1", "protein_xref_pubmed", "17301055", "protein_xref_iptmnet", "O35303" ], [ "O35303-1", "656", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35303", "protein_xref_iptmnet", "O35303" ], [ "O35303-1", "656", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "17721437", "protein_xref_iptmnet", "O35303" ], [ "O35787-1", "671", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35787", "protein_xref_iptmnet", "O35787" ], [ "O35787-1", "671", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35787" ], [ "O35787-1", "673", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35787", "protein_xref_iptmnet", "O35787" ], [ "O35787-1", "673", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35787" ], [ "O35889-1", "1090", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35889", "protein_xref_iptmnet", "O35889" ], [ "O35889-1", "1090", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "O35889" ], [ "O35889-1", "1282", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35889", "protein_xref_iptmnet", "O35889" ], [ "O35889-1", "1282", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35889" ], [ "O35889-1", "1282", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "O35889" ], [ "O35987-1", "114", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O35987", "protein_xref_iptmnet", "O35987" ], [ "O35987-1", "114", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35987" ], [ "O54898-1", "467", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O54898", "protein_xref_iptmnet", "O54898" ], [ "O54898-1", "467", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "O54898" ], [ "O70199-1", "474", "Thr", "Q703I1-1", "Oser1", "protein_xref_pelm", "O70199", "protein_xref_iptmnet", "O70199" ], [ "O70199-1", "474", "Thr", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O70199" ], [ "O88453-1", "366", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O88453", "protein_xref_iptmnet", "O88453" ], [ "O88453-1", "366", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O88453" ], [ "O88498-1", "109", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O88498", "protein_xref_iptmnet", "O88498" ], [ "O88498-1", "109", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "12388545", "protein_xref_iptmnet", "O88498" ], [ "O88498-1", "110", "Thr", "Q703I1-1", "Oser1", "protein_xref_pelm", "O88498", "protein_xref_iptmnet", "O88498" ], [ "O88498-1", "110", "Thr", "Q703I1-1", "Oser1", "protein_xref_pubmed", "12388545", "protein_xref_iptmnet", "O88498" ], [ "O88658-1", "1454", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O88658", "protein_xref_iptmnet", "O88658" ], [ "O88658-1", "1454", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O88658" ], [ "O88871-1", "883", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "O88871", "protein_xref_iptmnet", "O88871" ], [ "O88871-1", "883", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "O88871" ], [ "P00176-1", "128", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "P00176", "protein_xref_iptmnet", "P00176" ], [ "P00176-1", "128", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "2583091", "protein_xref_iptmnet", "P00176" ], [ "P01237-1", "178", "Ser", "Q64303-1", "Pak2", "protein_xref_pelm", "P01237", "protein_xref_iptmnet", "P01237" ], [ "P01237-1", "178", "Ser", "Q64303-1", "Pak2", "protein_xref_pubmed", "11943200", "protein_xref_iptmnet", "P01237" ], [ "P02401-1", "102", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "P02401", "protein_xref_iptmnet", "P02401" ], [ "P02401-1", "102", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P02401" ], [ "P02401-1", "105", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "P02401", "protein_xref_iptmnet", "P02401" ], [ "P02401-1", "105", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P02401" ], [ "P02688-1", "139", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "P02688", "protein_xref_iptmnet", "P02688" ], [ "P02688-1", "139", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "P02688" ], [ "P02688-1", "190", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "P02688", "protein_xref_iptmnet", "P02688" ], [ "P02688-1", "190", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "P02688" ], [ "P02688-1", "57", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "P02688", "protein_xref_iptmnet", "P02688" ], [ "P02688-1", "57", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "P02688" ], [ "P02688-1", "68", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "P02688", "protein_xref_iptmnet", "P02688" ], [ "P02688-1", "68", "Ser", "Q703I1-1", "Oser1", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "P02688" ], [ "P02688-1", "96", "Ser", "Q703I1-1", "Oser1", "protein_xref_pelm", "P02688", "protein_xref_iptmnet", "P02688" ] ] }, "readme": "Name\n - Rat Phosphorylation Sites (iPTMnet)\n\nVersion\n - 1.8.24\n\nCreated on\n - 2020-08-17T16:58:50.536651\n\nModified on\n - \n\nCreated by\n - [jeetvora@gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n\nI/O Domain\n Output Subdomain\n Name: rat_proteoform_phosphorylation_sites_iptmnet.csv\n URI: http://data.glygen.org/ln2data/releases/data/v-1.8.24/reviewed/rat_proteoform_phosphorylation_sites_iptmnet.csv\n Name: rat_proteoform_phosphorylation_sites_iptmnet.stat.csv\n URI: http://data.glygen.org/ln2data/releases/data/v-1.8.24/reviewed/rat_proteoform_phosphorylation_sites_iptmnet.stat.csv\n\nFields\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"119\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"119\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"120\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"49\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"118\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"117\"\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"115\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"", "downloadurl": "/ln2data/releases/data/v-1.8.24/reviewed/rat_proteoform_phosphorylation_sites_iptmnet.csv" }