{
    "io_domain": {
        "input_subdomain": [
            {
                "uri": {
                    "uri": "https://data.glygen.org/ln2wwwdata/source/GlyGen_table_to_PRO.obo", 
                    "filename": "GlyGen_table_to_PRO.obo"
                }
            }
        ], 
        "output_subdomain": [
            {
                "mediatype": "csv", 
                "uri": {
                    "uri": "http://data.glygen.org/ln2wwwdata/reviewed/human_protein_pro_annotation.csv", 
                    "filename": "human_protein_pro_annotation.csv"
                }
            }, 
            {
                "mediatype": "csv", 
                "uri": {
                    "uri": "http://data.glygen.org/ln2wwwdata/reviewed/human_protein_pro_annotation.stat.csv", 
                    "filename": "human_protein_pro_annotation.stat.csv"
                }
            }
        ]
    }, 
    "spec_version": "1.3.0", 
    "object_id": "https://biocomputeobject.org/GLY_000498/1.8.24", 
    "extension_domain": [
        {
            "extension_schema": "http://www.w3id.org/biocompute/extension_domain/1.1.0/dataset/dataset_extension.json", 
            "dataset_extension": {
                "additional_license": {
                    "data_license": "https://creativecommons.org/licenses/by/4.0/", 
                    "script_license": "https://www.gnu.org/licenses/gpl-3.0.en.html"
                }, 
                "dataset_categories": [
                    {
                        "category_value": "Homo sapiens", 
                        "category_name": "species"
                    }, 
                    {
                        "category_value": "Proteoform", 
                        "category_name": "molecule"
                    }, 
                    {
                        "category_value": "PRO ontology", 
                        "category_name": "tags"
                    }, 
                    {
                        "category_value": "csv", 
                        "category_name": "file_type"
                    }, 
                    {
                        "category_value": "Reviewed", 
                        "category_name": "status"
                    }, 
                    {
                        "category_value": "internal", 
                        "category_name": "scope"
                    }
                ]
            }
        }
    ], 
    "provenance_domain": {
        "license": "https://creativecommons.org/licenses/by/4.0/", 
        "name": "Protein Resource Ontology [Human]", 
        "contributors": [
            {
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Rahi Navelkar", 
                "email": "rsn13@gwu.edu"
            }, 
            {
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Jeet Vora", 
                "email": "jeetvora@gwu.edu"
            }, 
            {
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Robel Kahsay", 
                "email": "rykahsay@gwu.edu"
            }, 
            {
                "affiliation": "Georgetown University", 
                "contribution": [
                    "contributedBy"
                ], 
                "name": "Darren Natale", 
                "email": "dan5@georgetown.edu"
            }, 
            {
                "affiliation": "UniCarbKB", 
                "contribution": [
                    "contributedBy"
                ], 
                "name": "Matthew Campbell ", 
                "email": "m.campbell2@griffith.edu.au"
            }
        ], 
        "created": "2020-05-13T10:38:59.901723", 
        "modified": "2021-01-04T11:50:45.942849", 
        "version": "1.8.24"
    }, 
    "description_domain": {
        "keywords": [
            "Proteoforms", 
            "PRO", 
            "UniCarbKB"
        ], 
        "pipeline_steps": [
            {
                "name": "", 
                "step_number": 0, 
                "version": "", 
                "input_list": [
                    {
                        "uri": "https://data.glygen.org/ln2wwwdata/source/GlyGen_table_to_PRO.obo", 
                        "filename": "GlyGen_table_to_PRO.obo"
                    }
                ], 
                "output_list": [
                    {
                        "uri": "http://data.glygen.org/ln2wwwdata/reviewed/human_protein_pro_annotation.csv", 
                        "filename": "human_protein_pro_annotation.csv"
                    }
                ], 
                "prerequisite": [], 
                "description": "The source file was downloaded from the contributors (Darren Natale)  and a python script was used to convert the source file into a csv format."
            }
        ]
    }, 
    "execution_domain": {
        "external_data_endpoints": [], 
        "environment_variables": {}, 
        "script_driver": "", 
        "software_prerequisites": [], 
        "script": []
    }, 
    "parametric_domain": [
        {
            "step": "", 
            "value": "", 
            "param": ""
        }
    ], 
    "usability_domain": [
        "This dataset provides the Protein Resource Ontology (PRO) identifiers associated with the proteoforms generated based on the protein, site, glycan information retrieved from the UniCarbKB database for human [taxid:9606] proteins (https://data.glygen.org/GLYDS000040: v-1.4.5 09/13/2019)Source- PRO: https://proconsortium.org/pro.shtml, UniCarbKB: https://academic.oup.com/nar/article/42/D1/D215/1052197 ,https://doi.org/10.1093/nar/gkt1128. Please note that this dataset refers to the previous version of the UniCarbKB human glycoprotein dataset (https://data.glygen.org/GLYDS000040: v-1.4.5 09/13/2019)"
    ], 
    "etag": "5f260e839e0f9e62775c6cc93889c2fe", 
    "_id": {
        "$oid": "5ebc0683f5c47b716492b28c"
    }
}