{ "uniprot_canonical_ac": "A4KWA6-1", "ptm_annotation": [], "sequence": { "header": "sp|A4KWA6-1|CL2D3_RAT Isoform 1 of C-type lectin domain family 2 member D3 OS=Rattus norvegicus OX=10116 GN=Clec2d3 PE=2 SV=1 CANONICAL=A4KWA6-1", "length": 252, "sequence": "MSSSAHLQDAPPLLSGTLTQNEGQTSLRQSSSCGPSAASASESLSGYTESRIPHSKVRQGKGLRSIFPESRVKRYCCYGGVITVVAIAIVVPLSVTLSVKQMEQTSINNTSAASINNTSAASINNTSAACPSNWTEYGNKCFYFSEYTSNWTFSKDFCAAQGAELARFDTEEELNFLKRYKGSSGYWIGLHRESSEHPWKWTDNTQYNNLIPIRGDGQCGFLSDQLNISSSRVYVERPWICSKPKKYISQSQ" }, "uniprot_id": "CL2D3_RAT", "enzyme_annotation": [], "glycation": [], "keywords": [ "glycoprotein", "predicted.uniprotkb_gly" ], "species": [ { "common_name": "Rat", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6", "id": "A4KWA6", "database": "UniProtKB" } ], "name": "Rattus norvegicus", "taxid": 10116 } ], "publication": [ { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/17462921", "type": [ "PubMed" ], "id": "17462921" } ], "title": "Cytomegalovirus evasion of innate immunity by subversion of the NKR-P1B:Ocil/Clr-b missing-self axis.", "journal": "Immunity", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6", "id": "A4KWA6", "database": "UniProtKB" } ], "authors": "Chen P., Voigt S., Carlyle J.R., Chou W., Mesci A., Ettinger J., Fine J.H.", "date": "2007" } ], "uniprot_ac": "A4KWA6", "site_annotation": [ { "end_pos": 110, "annotation": "n_glycosylation_sequon", "start_pos": 108 }, { "end_pos": 111, "annotation": "n_glycosylation_sequon", "start_pos": 109 }, { "end_pos": 118, "annotation": "n_glycosylation_sequon", "start_pos": 116 }, { "end_pos": 119, "annotation": "n_glycosylation_sequon", "start_pos": 117 }, { "end_pos": 126, "annotation": "n_glycosylation_sequon", "start_pos": 124 }, { "end_pos": 127, "annotation": "n_glycosylation_sequon", "start_pos": 125 }, { "end_pos": 135, "annotation": "n_glycosylation_sequon", "start_pos": 133 }, { "end_pos": 152, "annotation": "n_glycosylation_sequon", "start_pos": 150 }, { "end_pos": 229, "annotation": "n_glycosylation_sequon", "start_pos": 227 } ], "isoforms": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6#A4KWA6-1", "isoform_ac": "A4KWA6-1", "locus": {}, "sequence": { "header": "sp|A4KWA6-1|CL2D3_RAT Isoform 1 of C-type lectin domain family 2 member D3 OS=Rattus norvegicus OX=10116 GN=Clec2d3 PE=2 SV=1 CANONICAL=A4KWA6-1", "length": 252, "sequence": "MSSSAHLQDAPPLLSGTLTQNEGQTSLRQSSSCGPSAASASESLSGYTESRIPHSKVRQGKGLRSIFPESRVKRYCCYGGVITVVAIAIVVPLSVTLSVKQMEQTSINNTSAASINNTSAASINNTSAACPSNWTEYGNKCFYFSEYTSNWTFSKDFCAAQGAELARFDTEEELNFLKRYKGSSGYWIGLHRESSEHPWKWTDNTQYNNLIPIRGDGQCGFLSDQLNISSSRVYVERPWICSKPKKYISQSQ" } }, { "url": "https://www.uniprot.org/uniprot/A4KWA6#B7TXW4-1", "isoform_ac": "B7TXW4-1", "locus": { "end_pos": 162181926, "strand": "+", "start_pos": 162189994, "chromosome": "4", "evidence": [ { "url": "https://www.ensembl.org/id/ENSRNOT00000045501", "id": "ENSRNOT00000045501", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSRNOP00000045915", "id": "ENSRNOP00000045915", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "tr|B7TXW4-1|CL2D3_RAT Computationally mapped isoform of C-type lectin domain family 2 member D3 OS=Rattus norvegicus OX=10116 GN=Clec2d3 PE=2 SV=1 CANONICAL=A4KWA6-1", "length": 262, "sequence": "MSPLNPRPYSMSSSAHLQDAPPLLSGTLTQNEGQTSLRQSSSCGPSAASASESLSGYTESRIPHSKVRQGKGLRSIFPESRVKRYCCYGGVITVVAIAIVVPLSVTLSVKQMEQTSINNTFAASINNTSAASINNTSAACPSNWTEYGNKCFYFSEYTSNWTFSKDFCAAQGAELARFDTEEELNFLKRYKGSSGYWIGLHRESSEHPWKWTDNTQYNNLVPIRGDGQCGFLSDQLNISSSRVYVERPWICSKPKKYISQSQ" } }, { "url": "https://www.uniprot.org/uniprot/A4KWA6#F7FPR5-1", "isoform_ac": "F7FPR5-1", "locus": { "end_pos": 162181926, "strand": "+", "start_pos": 162230663, "chromosome": "4", "evidence": [ { "url": "https://www.ensembl.org/id/ENSRNOT00000042872", "id": "ENSRNOT00000042872", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSRNOP00000040749", "id": "ENSRNOP00000040749", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "tr|F7FPR5-1|CL2D3_RAT Computationally mapped isoform of C-type lectin domain family 2 member D3 OS=Rattus norvegicus OX=10116 GN=Clec2d3 PE=2 SV=2 CANONICAL=A4KWA6-1", "length": 285, "sequence": "MFSFIRCSLLQQEEGAEPPSPECSETGENGPYSMPSSAHLQDPPPHLSGTLTQDEGQTSLRQSSSCGPSAASASESLSGSTESRIPHSKVRQGKGLRSIFPESRVKRYCCYGGVITVVAIAIVVPLSVTLSVKQMEQTSINNTFAASINNTSAASINNTSAACPSNWTEYGNKCFYFSEYTSNWTFSKDFCAAQGAELARFDTEEELNFLKRYKGSSGYWIGLHRESSEHPWKWTDNTQYNNLVPIRGDGQCGFLSDQLNISSSRVYVERPWICSKPKKYISQSQ" } } ], "pathway": [], "function": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6#function", "annotation": "Lectin-type cell surface receptor.", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6#function", "id": "A4KWA6", "database": "UniProtKB" } ] } ], "orthologs": [], "interactions": [], "synthesized_glycans": [], "snv": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "refseq": {}, "go_annotation": { "categories": [ { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046703", "pmid": "21873635", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6", "id": "A4KWA6", "database": "UniProtKB" } ], "name": "natural killer cell lectin-like receptor binding", "id": "GO:0046703" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6", "id": "A4KWA6", "database": "UniProtKB" } ], "name": "carbohydrate binding", "id": "GO:0030246" } ], "total": 2, "name": "Molecular Function" }, { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009897", "pmid": "21873635", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6", "id": "A4KWA6", "database": "UniProtKB" } ], "name": "external side of plasma membrane", "id": "GO:0009897" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016021", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6", "id": "A4KWA6", "database": "UniProtKB" } ], "name": "integral component of membrane", "id": "GO:0016021" } ], "total": 2, "name": "Cellular Component" } ] }, "gene_names": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6", "type": "recommended", "resource": "UniProtKB", "name": "Clec2d3" } ], "pro_annotation": [], "crossref": [ { "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03593", "id": "cd03593", "database": "CDD" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR001304", "id": "IPR001304", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR016186", "id": "IPR016186", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR016187", "id": "IPR016187", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR033992", "id": "IPR033992", "database": "InterPro" }, { "url": "http://pfam.xfam.org/family/PF00059", "id": "PF00059", "database": "Pfam" }, { "url": "http://purl.obolibrary.org/obo/PR_PR_A4KWA6", "id": "PR_A4KWA6", "database": "PRO" }, { "url": "http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=1588731", "id": "1588731", "database": "RGD" }, { "url": "https://www.uniprot.org/uniprot/A4KWA6", "id": "A4KWA6", "database": "UniProtKB" } ], "expression_disease": [], "glycosylation": [ { "residue": "Asn", "site_category": "predicted", "end_pos": 150, "evidence": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6#ptm_processing", "id": "A4KWA6", "database": "UniProtKB" } ], "subtype": "", "relation": "attached", "start_pos": 150, "glytoucan_ac": "", "type": "N-linked" } ], "mutagenesis": [], "disease": [], "phosphorylation": [], "mass": { "monoisotopic_mass": 27807.0, "chemical_mass": 27807.0 }, "expression_tissue": [], "gene": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6", "name": "Clec2d3", "locus": {} } ], "protein_names": [ { "url": "https://www.uniprot.org/uniprot/A4KWA6#names_and_taxonomy", "type": "recommended", "resource": "UniProtKB", "name": "C-type lectin domain family 2 member D3" } ] }