{ "uniprot_canonical_ac": "A1X283-1", "ptm_annotation": [ { "annotation": "Phosphorylated in SRC-transformed cells.", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/", "id": "", "database": "PubMed" } ] } ], "sequence": { "header": "sp|A1X283-1|SPD2B_HUMAN Isoform 1 of SH3 and PX domain-containing protein 2B OS=Homo sapiens OX=9606 GN=SH3PXD2B PE=1 SV=3 CANONICAL=A1X283-1", "length": 911, "sequence": "MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRPEDLNPPKEEHIGKKKSGGDQTSVDPMVLEQYVVVANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPPKPGPGSPSHPGALDLDGVSRQQNAVGREKELLSSQRDGRFEGRPVPDGDAKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKNLSGWWYIQIEDKEGWAPATFIDKYKKTSNASRPNFLAPLPHEVTQLRLGEAAALENNTGSEATGPSRPLPDAPHGVMDSGLPWSKDWKGSKDVLRKASSDMSASAGYEEISDPDMEEKPSLPPRKESIIKSEGELLERERERQRTEQLRGPTPKPPGVILPMMPAKHIPPARDSRRPEPKPDKSRLFQLKNDMGLECGHKVLAKEVKKPNLRPISKSKTDLPEEKPDATPQNPFLKSRPQVRPKPAPSPKTEPPQGEDQVDICNLRSKLRPAKSQDKSLLDGEGPQAVGGQDVAFSRSFLPGEGPGRAQDRTGKQDGLSPKEISCRAPPRPAKTTDPVSKSVPVPLQEAPQQRPVVPPRRPPPPKKTSSSSRPLPEVRGPQCEGHESRAAPTPGRALLVPPKAKPFLSNSLGGQDDTRGKGSLGPWGTGKIGENREKAAAASVPNADGLKDSLYVAVADFEGDKDTSSFQEGTVFEVREKNSSGWWFCQVLSGAPSWEGWIPSNYLRKKP" }, "uniprot_id": "SPD2B_HUMAN", "enzyme_annotation": [], "glycation": [], "keywords": [], "species": [ { "common_name": "Human", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "Homo sapiens", "taxid": 9606 } ], "publication": [ { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/12615925", "type": [ "PubMed" ], "id": "12615925" } ], "title": "The adaptor protein fish associates with members of the ADAMs family and localizes to podosomes of Src-transformed cells.", "journal": "J. Biol. Chem.", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "authors": "Abram C.L., Courtneidge S.A., Maurer L., Pass I., Roth T.M., Salinsky D., Seals D.F.", "date": "2003" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/18959745", "type": [ "PubMed" ], "id": "18959745" } ], "title": "A novel gene, fad49, plays a crucial role in the immediate early stage of adipocyte differentiation via involvement in mitotic clonal expansion.", "journal": "FEBS J.", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "authors": "Eguchi T., Osada S., Imagawa M., Nishizuka M., Hishida T.", "date": "2008" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/19144821", "type": [ "PubMed" ], "id": "19144821" } ], "title": "The novel adaptor protein Tks4 (SH3PXD2B) is required for functional podosome formation.", "journal": "Molecular biology of the cell", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ], "authors": "Buschman MD, Bromann PA, Cejudo-Martin P, Wen F, Pass I, Courtneidge SA", "date": "2009" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/19228371", "type": [ "PubMed" ], "id": "19228371" } ], "title": "Non-replication of an association of CTNNBL1 polymorphisms and obesity in a population of Central European ancestry.", "journal": "BMC medical genetics", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ], "authors": "Vogel CI, Greene B, Scherag A, Muller TD, Friedel S, Grallert H, Heid IM, Illig T, Wichmann HE, Schafer H, Hebebrand J, Hinney A", "date": "2009" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/19755710", "type": [ "PubMed" ], "id": "19755710" } ], "title": "Novel p47(phox)-related organizers regulate localized NADPH oxidase 1 (Nox1) activity.", "journal": "Sci. Signal.", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "authors": "Bokoch G.M., Fowler B., Courtneidge S.A., Gianni D., Diaz B., Taulet N.", "date": "2009" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/19807924", "type": [ "PubMed" ], "id": "19807924" } ], "title": "Identification of SH3 domain interaction partners of human FasL (CD178) by phage display screening.", "journal": "BMC Immunol.", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "authors": "Janssen O., Lettau M., Voss M.", "date": "2009" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/20137777", "type": [ "PubMed" ], "id": "20137777" } ], "title": "Disruption of the podosome adaptor protein TKS4 (SH3PXD2B) causes the skeletal dysplasia, eye, and cardiac abnormalities of Frank-Ter Haar Syndrome.", "journal": "Am. J. Hum. Genet.", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ], "authors": "Megarbane A., Veltman J.A., van Bokhoven H., de Brouwer A., Alanay Y., Albrecht B., Ben-Neriah Z., Courtneidge S.A., Iqbal Z., van Beusekom E., Hennekam R., van der Zwaag B., Ruiz-Lozano P., Millan J.L., Artuso R., Hamel B., Amenduni M., Cejudo-Martin P., Lindsey J.D., Oudakker A., Scimia M.C., Weinreb R.", "date": "2010" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/20609497", "type": [ "PubMed" ], "id": "20609497" } ], "title": "Direct interaction between Tks proteins and the N-terminal proline-rich region (PRR) of NoxA1 mediates Nox1-dependent ROS generation.", "journal": "Eur. J. Cell Biol.", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "authors": "Bokoch G.M., Gianni D., Dermardirossian C.", "date": "2011" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24105366", "type": [ "PubMed" ], "id": "24105366" } ], "title": "Mutations in SH3PXD2B cause Borrone dermato-cardio-skeletal syndrome.", "journal": "European journal of human genetics : EJHG", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ], "authors": "Wilson GR, Sunley J, Smith KR, Pope K, Bromhead CJ, Fitzpatrick E, Di Rocco M, van Steensel M, Coman DJ, Leventer RJ, Delatycki MB, Amor DJ, Bahlo M, Lockhart PJ", "date": "2014" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24129315", "type": [ "PubMed" ], "id": "24129315" } ], "title": "Immunoaffinity enrichment and mass spectrometry analysis of protein methylation.", "journal": "Mol. Cell. Proteomics", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "authors": "Beausoleil S.A., Wang Y., Zhou J., Comb M.J., Guo A., Lee K.A., Aguiar M., Bedford M.T., Gu H., Jia X., Kornhauser J., Mulhern D., Ren J., Silva J.C., Vemulapalli V., Yang V.", "date": "2014" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/29928795", "type": [ "PubMed" ], "id": "29928795" } ], "title": "EGF Regulates the Interaction of Tks4 with Src through Its SH2 and SH3 Domains.", "journal": "Biochemistry", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ], "authors": "Dulk M, Szeder B, Glatz G, Mero BL, Koprivanacz K, Kudlik G, Vas V, Sipeki S, Cserkaszky A, Radnai L, Buday L", "date": "2018" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/30962481", "type": [ "PubMed" ], "id": "30962481" } ], "title": "Significance of the Tks4 scaffold protein in bone tissue homeostasis.", "journal": "Scientific reports", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ], "authors": "Vas V, Kovacs T, Kormendi S, Brody A, Kudlik G, Szeder B, Mezo D, Kallai D, Koprivanacz K, Mero BL, Dulk M, Tovari J, Vajdovich P, Senel SN, Ozcan I, Helyes Z, Dobo-Nagy C, Buday L", "date": "2019" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/31591456", "type": [ "PubMed" ], "id": "31591456" } ], "title": "Enhanced endothelial motility and multicellular sprouting is mediated by the scaffold protein TKS4.", "journal": "Scientific reports", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ], "authors": "Mehes E, Barath M, Gulyas M, Bugyik E, Geiszt M, Szoor A, Lanyi A, Czirok A", "date": "2019" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/31671862", "type": [ "PubMed" ], "id": "31671862" } ], "title": "Absence of the Tks4 Scaffold Protein Induces Epithelial-Mesenchymal Transition-Like Changes in Human Colon Cancer Cells.", "journal": "Cells", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ], "authors": "Szeder B, Tarnoki-Zach J, Lakatos D, Vas V, Kudlik G, Mero B, Koprivanacz K, Banyai L, Hamori L, Rona G, Czirok A, Furedi A, Buday AL", "date": "2019" } ], "uniprot_ac": "A1X283", "site_annotation": [ { "end_pos": 187, "annotation": "n_glycosylation_sequon", "start_pos": 185 }, { "end_pos": 403, "annotation": "n_glycosylation_sequon", "start_pos": 401 }, { "end_pos": 432, "annotation": "n_glycosylation_sequon", "start_pos": 430 }, { "end_pos": 459, "annotation": "n_glycosylation_sequon", "start_pos": 457 }, { "end_pos": 884, "annotation": "n_glycosylation_sequon", "start_pos": 882 } ], "isoforms": [ { "url": "https://www.uniprot.org/uniprot/A1X283#A0A1B0GUF2-1", "isoform_ac": "A0A1B0GUF2-1", "locus": { "end_pos": 172325277, "strand": "+", "start_pos": 172454308, "chromosome": "5", "evidence": [ { "url": "https://www.ensembl.org/id/ENST00000636523", "id": "ENST00000636523", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSP00000490082", "id": "ENSP00000490082", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "tr|A0A1B0GUF2-1|SPD2B_HUMAN Computationally mapped isoform of SH3 and PX domain-containing protein 2B OS=Homo sapiens OX=9606 GN=SH3PXD2B PE=1 SV=1 CANONICAL=A1X283-1", "length": 444, "sequence": "XQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRPEDLNPPKEEHIGKKKSGGDQTSVDPMVLEQYVVVANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEVSWRYWSLPRPVGRRRTLGDLYAISWRQEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPPKPGPGSPSHPGALDLDGVSRQQNAVGREKELLSSQRDGRFEGRPVPDGDAKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEDHKNVHLESPVEVPLRRIKMRTALGKHVAASMEM" } }, { "url": "https://www.uniprot.org/uniprot/A1X283#A1X283-1", "isoform_ac": "A1X283-1", "locus": { "end_pos": 172338372, "strand": "+", "start_pos": 172454352, "chromosome": "5", "evidence": [ { "url": "https://www.ensembl.org/id/ENST00000311601", "id": "ENST00000311601", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSP00000309714", "id": "ENSP00000309714", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "sp|A1X283-1|SPD2B_HUMAN Isoform 1 of SH3 and PX domain-containing protein 2B OS=Homo sapiens OX=9606 GN=SH3PXD2B PE=1 SV=3 CANONICAL=A1X283-1", "length": 911, "sequence": "MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRPEDLNPPKEEHIGKKKSGGDQTSVDPMVLEQYVVVANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPPKPGPGSPSHPGALDLDGVSRQQNAVGREKELLSSQRDGRFEGRPVPDGDAKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKNLSGWWYIQIEDKEGWAPATFIDKYKKTSNASRPNFLAPLPHEVTQLRLGEAAALENNTGSEATGPSRPLPDAPHGVMDSGLPWSKDWKGSKDVLRKASSDMSASAGYEEISDPDMEEKPSLPPRKESIIKSEGELLERERERQRTEQLRGPTPKPPGVILPMMPAKHIPPARDSRRPEPKPDKSRLFQLKNDMGLECGHKVLAKEVKKPNLRPISKSKTDLPEEKPDATPQNPFLKSRPQVRPKPAPSPKTEPPQGEDQVDICNLRSKLRPAKSQDKSLLDGEGPQAVGGQDVAFSRSFLPGEGPGRAQDRTGKQDGLSPKEISCRAPPRPAKTTDPVSKSVPVPLQEAPQQRPVVPPRRPPPPKKTSSSSRPLPEVRGPQCEGHESRAAPTPGRALLVPPKAKPFLSNSLGGQDDTRGKGSLGPWGTGKIGENREKAAAASVPNADGLKDSLYVAVADFEGDKDTSSFQEGTVFEVREKNSSGWWFCQVLSGAPSWEGWIPSNYLRKKP" } }, { "url": "https://www.uniprot.org/uniprot/A1X283#G3V144-1", "isoform_ac": "G3V144-1", "locus": { "end_pos": 172325279, "strand": "+", "start_pos": 172454352, "chromosome": "5", "evidence": [ { "url": "https://www.ensembl.org/id/ENST00000519643", "id": "ENST00000519643", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSP00000430890", "id": "ENSP00000430890", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "tr|G3V144-1|SPD2B_HUMAN Computationally mapped isoform of SH3 and PX domain-containing protein 2B OS=Homo sapiens OX=9606 GN=SH3PXD2B PE=1 SV=1 CANONICAL=A1X283-1", "length": 430, "sequence": "MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRPEDLNPPKEEHIGKKKSGGDQTSVDPMVLEQYVVVANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPPKPGPGSPSHPGALDLDGVSRQQNAVGREKELLSSQRDGRFEGRPVPDGDAKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEDHKNVHLESPVEVPLRRIKMRTALGKHVAASMEM" } }, { "url": "https://www.uniprot.org/uniprot/A1X283#H0YAU1-1", "isoform_ac": "H0YAU1-1", "locus": { "end_pos": 172333727, "strand": "+", "start_pos": 172350386, "chromosome": "5", "evidence": [ { "url": "https://www.ensembl.org/id/ENST00000518522", "id": "ENST00000518522", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSP00000428076", "id": "ENSP00000428076", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "tr|H0YAU1-1|SPD2B_HUMAN Computationally mapped isoform of SH3 and PX domain-containing protein 2B OS=Homo sapiens OX=9606 GN=SH3PXD2B PE=1 SV=1 CANONICAL=A1X283-1", "length": 81, "sequence": "XPDGDAKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEEQWALPTTSCLLIG" } } ], "pathway": [ { "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+hsa:285590", "resource": "KEGG Pathway", "id": "hsa:285590", "name": "" } ], "function": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "annotation": "Absence of the Tks4 Scaffold Protein Induces Epithelial-Mesenchymal Transition-Like Changes in Human Colon Cancer Cells. Publication Status: Online-Only", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ] }, { "url": "https://www.uniprot.org/uniprot/A1X283#function", "annotation": "Adapter protein involved in invadopodia and podosome formation and extracellular matrix degradation. Binds matrix metalloproteinases (ADAMs), NADPH oxidases (NOXs) and phosphoinositides. Acts as an organizer protein that allows NOX1- or NOX3-dependent reactive oxygen species (ROS) generation and ROS localization. Plays a role in mitotic clonal expansion during the immediate early stage of adipocyte differentiation (By similarity).", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283#function", "id": "A1X283", "database": "UniProtKB" } ] }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "annotation": "Enhanced endothelial motility and multicellular sprouting is mediated by the scaffold protein TKS4. Erratum:[Sci Rep. 2020 Jul 20;10(1):12293. PMID: 32686692] Publication Status: Online-Only", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ] }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "annotation": "Observational study of gene-disease association. (HuGE Navigator) Publication Status: Online-Only", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ] }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "annotation": "Significance of the Tks4 scaffold protein in bone tissue homeostasis. Publication Status: Online-Only", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ] }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "annotation": "The interaction of Tks4 with Src may result in the long term stabilization of the kinase in its active conformation, leading to prolonged Src activity following epidermal growth factor stimulation.", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ] }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "annotation": "These findings establish a role for TKS4 in Frank-Ter Haar syndrome and embryonic development.", "evidence": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" } ] } ], "orthologs": [ { "uniprot_canonical_ac": "A2AAY5-1", "protein_name": "SH3 and PX domain-containing protein 2B", "sequence": { "length": 908, "sequence": "MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGATEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRPEDLNPPKEEHIGKKKSGNDPTSVDPMVLEQYVVVADYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYLKKNSGEPLPPKLGPSSPAHSGALDLDGVSRHQNAMGREKELLNNQRDGRFEGRLVPDGDVKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKSLSGWWYIQMEDKEGWAPATFIDKYKKTSSASRPNFLAPLPHEMTQLRLGDAAATENNTGPEAVGPSRPLPEAPHGAVDSGMLWSKDWKGGKEAPRKASSDLSASTGYEEISDPTQEEKPSLPPRKESIIKSEEELLERERQKMEPLRGSSPKPPGMILPMIPAKHAPLARDSRKPEPKLDKSKFPLRNDMGLECGHKVLAKEVKKPNLRPISRSKAELSEEKVDPTSQNLFMKSRPQVRPKPTPSPKTEPAQSEDHVDIYNLRSKLRPAKSQEKALLDGESHHAAGSHDTALSRSFLPGEGPGHGQDRSGRQDGLSPKETPCRAPPRPAKTTDPGPKNVPVPVQEATLQQRPVVPPRRPPPPKKTSSSPLSCRPLPEVRGAQREESRVAPAAGRALLVPPKAKPFLSNSSVGQDDMRGKGGLGPRVTGKVGETREKAASFLNADGPKDSLYVAVANFEGDEDTSSFQEGTVFEVREKNSSGWWFCQVLSGAPSWEGWIPSNYLRKKP" }, "evidence": [ { "url": "https://omabrowser.org/oma/group/A1X283/", "id": "A1X283", "database": "OMA" }, { "url": "http://www.informatics.jax.org/homology/27952", "id": "27952", "database": "MGI" } ], "common_name": "Mouse", "organism": "Mus musculus", "gene_name": "Sh3pxd2b", "tax_id": 10090 }, { "uniprot_canonical_ac": "D3ZAF9-1", "protein_name": "SH3 and PX domains 2B", "sequence": { "length": 804, "sequence": "ALIQLPPYISQCDEVLQFFETRPEDLNPPKEEHIGKKKSGSDPTSVDPMVLEQYVVVANYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGVVVEVIQKNLEGWWKIRFQGKEGWAPASYLKKSSGEPLPPKLGPSSSAHSGALDLDGVSRQQNAVGREKELLNNQRDGRFEGRLAPDGDVKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKSLSGWWYIQMEDKEGWAPATFIDKYKKTSSASRPNFLAPLPHEMTQLRLGEAAATENNTGPEAVGPSRPLPEAPHGAVDSGMLWSKDWKGGKEAPRKASSDLSASTGYEEISDPTQEEKPSLPPRKESIIKSEEELLERERQKMEPHRGSSPKPPGVILPMIPAKHAPLARDSKKPEPKPDKSKFPLRNDMGLECGHKVLAKEVKKPNLRPISRSKAELPEEKVEPNPQNLFLKSRPQVRPKPTPSPKTEPAQGEDQVDIYNLRSKLRPAKSQEKALLDGESHHAAGGHDTALGRSFLPGEGPGRGQDRSGRQDGLSPKETPCRAPPRPAKTTDPGPKNVPVPVQEATQQRPVVPPRRPPPPKKTSSSPLSCRPLPEVRGSQREESRAIPASGRALLVPPKAKPFLSNSSVGQDDIRGKGGLGPRIAGKVGETREKAASFLNADGPKDSLYVAVANFEGDEDTSSFQEGTVFEVREKNSSGWWFCRVLSGAPSWEGWIPSNYLRKKP" }, "evidence": [ { "url": "https://omabrowser.org/oma/group/A1X283/", "id": "A1X283", "database": "OMA" } ], "common_name": "Rat", "organism": "Rattus norvegicus", "gene_name": "Sh3pxd2b", "tax_id": 10116 } ], "interactions": [], "synthesized_glycans": [], "snv": [ { "sequence_org": "S", "start_pos": 169, "alt_nt": "A", "chr_id": "5", "ref_nt": "G", "chr_pos": "171789795", "disease": [ { "synonyms": [], "recommended_name": { "id": "DOID:9256", "url": "http://disease-ontology.org/term/DOID:9256", "resource": "Disease Ontology", "name": "colorectal cancer", "description": "A large intestine cancer that is located_in the colon and/or located_in the rectum." } } ], "evidence": [ { "url": "https://hive.biochemistry.gwu.edu/biomuta/proteinview/A1X283", "id": "A1X283", "database": "BioMuta" } ], "glycoeffect": [ "o-glyco-site-loss" ], "frequency": "1.2", "sequence_mut": "L", "subjects_tested": "162", "keywords": [ "biomuta", "somatic", "cancer", "disease" ], "annotation": "Somatic mutation passed 1 out of 6 filters: patient freq. 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(2.0%).", "end_pos": 336, "minor_allelic_frequency": "", "subjects_positive": "1" }, { "sequence_org": "R", "start_pos": 698, "alt_nt": "T", "chr_id": "5", "ref_nt": "C", "chr_pos": "171766016", "disease": [ { "synonyms": [ { "id": "DOID:10534", "url": "http://disease-ontology.org/term/DOID:10534", "resource": "Disease Ontology", "name": "gastric cancer", "description": "" }, { "id": "DOID:10534", "url": "http://disease-ontology.org/term/DOID:10534", "resource": "Disease Ontology", "name": "gastric neoplasm", "description": "" } ], "recommended_name": { "id": "DOID:10534", "url": "http://disease-ontology.org/term/DOID:10534", "resource": "Disease Ontology", "name": "stomach cancer", "description": "A gastrointestinal system cancer that is located_in the stomach." } }, { "synonyms": [], "recommended_name": { "id": "DOID:1324", "url": "http://disease-ontology.org/term/DOID:1324", "resource": "Disease Ontology", "name": "lung cancer", "description": "A respiratory system cancer that is located_in the lung." } }, { "synonyms": [ { "id": "DOID:363", "url": "http://disease-ontology.org/term/DOID:363", "resource": "Disease Ontology", "name": "CA - cancer of uterus", "description": "" }, { "id": "DOID:363", "url": "http://disease-ontology.org/term/DOID:363", "resource": "Disease Ontology", "name": "Tumour of uterus", "description": "" }, { "id": "DOID:363", "url": "http://disease-ontology.org/term/DOID:363", "resource": "Disease Ontology", "name": "malignant neoplasm of uterus", "description": "" }, { "id": "DOID:363", "url": "http://disease-ontology.org/term/DOID:363", "resource": "Disease Ontology", "name": "malignant uterine tumor", "description": "" }, { "id": "DOID:363", "url": "http://disease-ontology.org/term/DOID:363", "resource": "Disease Ontology", "name": "neoplasm of uterus", "description": "" }, { "id": "DOID:363", "url": "http://disease-ontology.org/term/DOID:363", "resource": "Disease Ontology", "name": "uterine tumor", "description": "" }, { "id": "DOID:363", "url": "http://disease-ontology.org/term/DOID:363", "resource": "Disease Ontology", "name": "uterus neoplasm", "description": "" } ], "recommended_name": { "id": "DOID:363", "url": "http://disease-ontology.org/term/DOID:363", "resource": "Disease Ontology", "name": "uterine cancer", "description": "A female reproductive organ cancer that is located_in the uterus." } } ], "evidence": [ { "url": "https://hive.biochemistry.gwu.edu/biomuta/proteinview/A1X283", "id": "A1X283", "database": "BioMuta" } ], "glycoeffect": [], "frequency": "0.1", "sequence_mut": "Q", "subjects_tested": "1044", "keywords": [ "biomuta", "somatic", "cancer", "disease" ], "annotation": "Somatic mutation passed 1 out of 6 filters: num. of cancers (3).", "end_pos": 698, "minor_allelic_frequency": "", "subjects_positive": "1" } ], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" }, { "name": "homologset.mgi", "label": "MGI Homologs" } ], "refseq": { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "ac": "NP_001017995.1", "name": "SH3 and PX domain-containing protein 2B isoform a", "summary": "This gene encodes an adapter protein that is characterized by a PX domain and four Src homology 3 domains. The encoded protein is required for podosome formation and is involved in cell adhesion and migration of numerous cell types. Mutations in this gene are the cause of Frank-ter Haar syndrome (FTHS), and also Borrone Dermato-Cardio-Skeletal (BDCS) syndrome. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Apr 2015]." }, "go_annotation": { "categories": [ { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070273", "pmid": "21873635", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "phosphatidylinositol-4-phosphate binding", "id": "GO:0070273" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016176", "pmid": "21873635", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "superoxide-generating NADPH oxidase activator activity", "id": "GO:0016176" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010314", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "phosphatidylinositol-5-phosphate binding", "id": "GO:0010314" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042169", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "SH2 domain binding", "id": "GO:0042169" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080025", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "phosphatidylinositol-3,5-bisphosphate binding", "id": "GO:0080025" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032266", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "phosphatidylinositol-3-phosphate binding", "id": "GO:0032266" } ], "total": 6, "name": "Molecular Function" }, { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "cytoplasm", "id": "GO:0005737" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030054", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "cell junction", "id": "GO:0030054" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002102", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "podosome", "id": "GO:0002102" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042995", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "cell projection", "id": "GO:0042995" } ], "total": 4, "name": "Cellular Component" }, { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007507", "pmid": "20137777", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "heart development", "id": "GO:0007507" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022617", "pmid": "19755710", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "extracellular matrix disassembly", "id": "GO:0022617" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001501", "pmid": "20137777", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "skeletal system development", "id": "GO:0001501" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060348", "pmid": "20137777", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "bone development", "id": "GO:0060348" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072657", "pmid": "19755710", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "protein localization to membrane", "id": "GO:0072657" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001654", "pmid": "20137777", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "eye development", "id": "GO:0001654" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006801", "pmid": "19755710", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "superoxide metabolic process", "id": "GO:0006801" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904888", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "cranial skeletal system development", "id": "GO:1904888" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002051", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "osteoblast fate commitment", "id": "GO:0002051" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904179", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "positive regulation of adipose tissue development", "id": "GO:1904179" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060378", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "regulation of brood size", "id": "GO:0060378" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010628", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "positive regulation of gene expression", "id": "GO:0010628" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045600", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "positive regulation of fat cell differentiation", "id": "GO:0045600" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060612", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "adipose tissue development", "id": "GO:0060612" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051496", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "positive regulation of stress fiber assembly", "id": "GO:0051496" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048705", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "skeletal system morphogenesis", "id": "GO:0048705" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0040018", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "positive regulation of multicellular organism growth", "id": "GO:0040018" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071800", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "name": "podosome assembly", "id": "GO:0071800" } ], "total": 18, "name": "Biological Process" } ] }, "gene_names": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/A1X283", "type": "synonym", "resource": "RefSeq", "name": "FAD49; FTHS; HOFI; KIAA1295; TKS4; TSK4" }, { "url": "https://www.uniprot.org/uniprot/A1X283", "type": "synonym", "resource": "UniProtKB", "name": "FAD49" }, { "url": "https://www.uniprot.org/uniprot/A1X283", "type": "synonym", "resource": "UniProtKB", "name": "KIAA1295" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/A1X283", "type": "synonym", "resource": "RefSeq", "name": "SH3PXD2B" }, { "url": "https://www.uniprot.org/uniprot/A1X283", "type": "recommended", "resource": "UniProtKB", "name": "SH3PXD2B" }, { "url": "https://www.uniprot.org/uniprot/A1X283", "type": "synonym", "resource": "UniProtKB", "name": "TKS4" } ], "pro_annotation": [], "crossref": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" }, { "url": "https://hive.biochemistry.gwu.edu/biomuta/proteinview/A1X283", "id": "A1X283", "database": "BioMuta" }, { "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06888", "id": "cd06888", "database": "CDD" }, { "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12018", "id": "cd12018", "database": "CDD" }, { "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12075", "id": "cd12075", "database": "CDD" }, { "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12076", "id": "cd12076", "database": "CDD" }, { "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12078", "id": "cd12078", "database": "CDD" }, { "url": "http://www.genecards.org/cgi-bin/carddisp.pl?gene=SH3PXD2B", "id": "SH3PXD2B", "database": "GeneCards" }, { "url": "https://www.ncbi.nlm.nih.gov/gene/285590", "id": "285590", "database": "GeneID" }, { "url": "https://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=29242", "id": "29242", "database": "HGNC" }, { "url": "https://www.ebi.ac.uk/intact/interactors/id:A1X283*", "id": "A1X283", "database": "IntAct" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "id": "IPR001452", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR001683", "id": "IPR001683", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR030512", "id": "IPR030512", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR035477", "id": "IPR035477", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR035478", "id": "IPR035478", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR035479", "id": "IPR035479", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR035480", "id": "IPR035480", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "id": "IPR036028", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR036871", "id": "IPR036871", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR037961", "id": "IPR037961", "database": "InterPro" }, { "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+hsa:285590", "id": "hsa:285590", "database": "KEGG Pathway" }, { "url": "http://www.omim.org/entry/249420", "id": "249420", "database": "MIM" }, { "url": "http://www.omim.org/entry/613293", "id": "613293", "database": "MIM" }, { "url": "https://www.nextprot.org/entry/NX_A1X283", "id": "NX_A1X283", "database": "neXtProt" }, { "url": "https://omabrowser.org/oma/group/PMIPTKH/", "id": "PMIPTKH", "database": "OMA" }, { "url": "http://www.orthodb.org/?query=1183210at2759", "id": "1183210at2759", "database": "OrthoDB" }, { "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15706:SF19", "id": "PTHR15706:SF19", "database": "PANTHER" }, { "url": "http://pfam.xfam.org/family/PF00018", "id": "PF00018", "database": "Pfam" }, { "url": "http://pfam.xfam.org/family/PF00787", "id": "PF00787", "database": "Pfam" }, { "url": "http://pfam.xfam.org/family/PF07653", "id": "PF07653", "database": "Pfam" }, { "url": "https://pharos.nih.gov/targets/A1X283", "id": "A1X283", "database": "PHAROS" }, { "url": "http://purl.obolibrary.org/obo/PR_PR_A1X283", "id": "PR_A1X283", "database": "PRO" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017995.1", "id": "NP_001017995.1", "database": "RefSeq" }, { "url": "https://www.uniprot.org/uniprot/A1X283", "id": "A1X283", "database": "UniProtKB" } ], "expression_disease": [ { "name": "Prostate cancer [DO disease name]", "trend": "Down", "disease": [ { "synonyms": [ { "id": "DOID:10283", "url": "http://disease-ontology.org/term/DOID:10283", "resource": "Disease Ontology", "name": "NGP - new growth of prostate", "description": "" }, { "id": "DOID:10283", "url": 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"https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" } ] }, { "tissue": { "url": "http://purl.obolibrary.org/obo/UBERON_0001987", "uberon": "0001987", "name": "Placenta" }, "present": "yes", "evidence": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" } ] }, { "tissue": { "url": "http://purl.obolibrary.org/obo/UBERON_0002046", "uberon": "0002046", "name": "Thyroid gland" }, "present": "yes", "evidence": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" } ] }, { "tissue": { "url": "http://purl.obolibrary.org/obo/UBERON_0002048", "uberon": "0002048", "name": "Lung" }, "present": "yes", "evidence": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" } ] }, { "tissue": { "url": "http://purl.obolibrary.org/obo/UBERON_0002107", "uberon": "0002107", "name": "Liver" }, "present": "yes", "evidence": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" } ] }, { "tissue": { "url": "http://purl.obolibrary.org/obo/UBERON_0002367", "uberon": "0002367", "name": "Prostate gland" }, "present": "yes", "evidence": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" } ] }, { "tissue": { "url": "http://purl.obolibrary.org/obo/UBERON_0002369", "uberon": "0002369", "name": "Adrenal gland" }, "present": "yes", "evidence": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" } ] }, { "tissue": { "url": "http://purl.obolibrary.org/obo/UBERON_0009853", "uberon": "0009853", "name": "Body of uterus" }, "present": "yes", "evidence": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSG00000174705", "id": "ENSG00000174705", "database": "Bgee" } ] } ], "gene": [ { "url": "https://www.uniprot.org/uniprot/A1X283", "name": "SH3PXD2B", "locus": { "end_pos": 172325000, "strand": "-", "start_pos": 172454523, "chromosome": "5", "evidence": [ { "url": "https://www.ensembl.org/id/ENSG00000174705", "id": "ENSG00000174705", "database": "Ensembl Gene" } ] } } ], "protein_names": [ { "url": "https://www.uniprot.org/uniprot/A1X283#names_and_taxonomy", "type": "synonym", "resource": "UniProtKB", "name": "Adapter protein HOFI" }, { "url": "https://www.uniprot.org/uniprot/A1X283#names_and_taxonomy", "type": "synonym", "resource": "UniProtKB", "name": "Factor for adipocyte differentiation 49" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/A1X283", "type": "synonym", "resource": "RefSeq", "name": "SH3 and PX domain-containing protein 2B isoform a" }, { "url": "https://www.uniprot.org/uniprot/A1X283#names_and_taxonomy", "type": "recommended", "resource": "UniProtKB", "name": "SH3 and PX domain-containing protein 2B" }, { "url": "https://www.uniprot.org/uniprot/A1X283#names_and_taxonomy", "type": "synonym", "resource": "UniProtKB", "name": "Tyrosine kinase substrate with four SH3 domains" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/A1X283", "type": "synonym", "resource": "RefSeq", "name": "adaptor protein HOFI; adapter protein HOFI; factor for adipocyte differentiation 49; tyrosine kinase substrate with four SH3 domains" } ] }