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"evidence": [ { "url": "https://www.glygen.org/glycan/G02030ZB", "id": "G02030ZB", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G42295MA", "id": "G42295MA", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G58063ME", "id": "G58063ME", "database": "GNOme" } ], "taxid": 10090, "name": "Mus musculus" }, { "common_name": "Human", "annotation_category": "Subsumption", "evidence": [ { "url": "https://www.glygen.org/glycan/G02030ZB", "id": "G02030ZB", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G42295MA", "id": "G42295MA", "database": "GNOme" } ], "taxid": 9606, "name": "Homo sapiens" }, { "common_name": "SARS-CoV-2", "annotation_category": "Direct", "evidence": [ { "url": "https://data.glygen.org/GLY_000479", "id": "GLY_000479", "database": "GlyGen" }, { "url": "http://www.unicarbkb.org/structure/UniCarbKB", "id": "UniCarbKB", "database": "UniCarbKB" } ], "taxid": 2697049, "name": "Severe acute respiratory syndrome coronavirus 2" }, { "common_name": "Human", "annotation_category": "Direct", "evidence": [ { "url": "https://edwardslab.bmcb.georgetown.edu/gptwiki/PE001014", "id": "PE001014", "database": "GPTwiki" }, { "url": "https://edwardslab.bmcb.georgetown.edu/gptwiki/PE001018", "id": "PE001018", "database": "GPTwiki" }, { "url": "https://edwardslab.bmcb.georgetown.edu/gptwiki/PE001141", "id": "PE001141", "database": "GPTwiki" }, { "url": "https://edwardslab.bmcb.georgetown.edu/gptwiki/PE001152", "id": "PE001152", "database": "GPTwiki" }, { "url": "http://www.unicarbkb.org/structure/UniCarbKB", "id": "UniCarbKB", "database": "UniCarbKB" } ], "taxid": 9606, "name": "Homo sapiens" }, { "common_name": "Rat", "annotation_category": "Subsumption", "evidence": [ { "url": "https://www.glygen.org/glycan/G02030ZB", "id": "G02030ZB", "database": "GNOme" } ], "taxid": 10116, "name": "Rattus norvegicus" }, { "common_name": "SARS-CoV-2", "annotation_category": "Subsumption", "evidence": [ { "url": 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Miller FW, Tomer KB, Deterding LJ", "date": "2011" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/32366695", "type": [ "PubMed" ], "id": "32366695" } ], "title": "Site-specific glycan analysis of the SARS-CoV-2 spike.", "journal": "Science (New York, N.Y.)", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P0DTC2/annotated", "id": "P0DTC2", "database": "UniCarbKB" } ], "authors": "Watanabe Y, Allen JD, Wrapp D, McLellan JS, Crispin M", "date": "2020" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24766575", "type": [ "PubMed" ], "id": "24766575" } ], "title": "Efficient and accurate glycopeptide identification pipeline for high-throughput site-specific N-glycosylation analysis.", "journal": "Journal of proteome research", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01871/annotated", "id": "P01871", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01877/annotated", "id": "P01877", "database": "UniCarbKB" } ], "authors": "Liu M, Zhang Y, Chen Y, Yan G, Shen C, Cao J, Zhou X, Liu X, Zhang L, Shen H, Lu H, He F, Yang P", "date": "2014" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/29741879", "type": [ "PubMed" ], "id": "29741879" } ], "title": "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "journal": "Analytical chemistry", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01876/annotated", "id": "P01876", "database": "UniCarbKB" } ], "authors": "Hu Y, Shah P, Clark DJ, Ao M, Zhang H", "date": "2018" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/29671580", "type": [ "PubMed" ], "id": "29671580" } ], "title": "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "journal": "Analytical chemistry", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q8IVL1/annotated", "id": "Q8IVL1", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01031/annotated", "id": "P01031", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P05155/annotated", "id": "P05155", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q9Y2H9/annotated", "id": "Q9Y2H9", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01876/annotated", "id": "P01876", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q12866/annotated", "id": "Q12866", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01877/annotated", "id": "P01877", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q9HCE0/annotated", "id": "Q9HCE0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q5H9R7/annotated", "id": "Q5H9R7", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01871/annotated", "id": "P01871", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q9Y4K1/annotated", "id": "Q9Y4K1", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P06681/annotated", "id": "P06681", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q9Y210/annotated", "id": "Q9Y210", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q7Z7M0/annotated", "id": "Q7Z7M0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01859/annotated", "id": "P01859", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P08185/annotated", "id": "P08185", "database": "UniCarbKB" } ], "authors": "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H", "date": "2018" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24841998", "type": [ "PubMed" ], "id": "24841998" } ], "title": "Comparison of sialylated N-glycopeptide levels in serum of pancreatic cancer patients, acute pancreatitis patients, and healthy controls.", "journal": "Proteomics", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01871/annotated", "id": "P01871", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01877/annotated", "id": "P01877", "database": "UniCarbKB" } ], "authors": "Kontro H, Joenvaara S, Haglund C, Renkonen R", "date": "2014" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/30659065", "type": [ "PubMed" ], "id": "30659065" } ], "title": "Multi-isotype Glycoproteomic Characterization of Serum Antibody Heavy Chains Reveals Isotype- and Subclass-Specific N-Glycosylation Profiles.", "journal": "Molecular & cellular proteomics : MCP", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01871/annotated", "id": "P01871", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01877/annotated", "id": "P01877", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01857/annotated", "id": "P01857", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P01876/annotated", "id": "P01876", "database": "UniCarbKB" } ], "authors": "Chandler KB, Mehta N, Leon DR, Suscovich TJ, Alter G, Costello CE", "date": "2019" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/23345538", "type": [ "PubMed" ], "id": "23345538" } ], "title": "Glycoproteomic analysis of the secretome of human endothelial cells.", "journal": "Molecular & cellular proteomics : MCP", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q13201/annotated", "id": "Q13201", "database": "UniCarbKB" } ], "authors": "Yin X, Bern M, Xing Q, Ho J, Viner R, Mayr M", "date": "2013" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24393138", "type": [ "PubMed" ], "id": "24393138" } ], "title": "Glycan analysis of Prostate Specific Antigen (PSA) directly from the intact glycoprotein by HR-ESI/TOF-MS.", "journal": "Journal of proteome research", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P07288/annotated", "id": "P07288", "database": "UniCarbKB" } ], "authors": "Behnken HN, Ruthenbeck A, Schulz JM, Meyer B", "date": "2014" }, { "reference": [ { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24090084", "type": [ "PubMed" ], "id": "24090084" } ], "title": "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "journal": "Journal of proteome research", "evidence": [ { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc5Hex5dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/P07340/annotated", "id": "P07340", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/proteinsummary/Q63345/annotated", "id": "Q63345", "database": "UniCarbKB" } ], "authors": "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ", "date": "2013" } ], "subsumption": [ { "type": "basecomposition", "id": "G81088WT", "relationship": "basecomposition" }, { "type": "composition", "id": "G12580WI", "relationship": "composition" } ], "enzyme": [], "motifs": [], "glytoucan_ac": "G12580WI", "composition": [ { "residue": "p", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061", "name": "Phosphate", "cid": "1061" }, { "residue": "hexn", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739", "name": "2-Amino-2-Deoxy-Hexose", "cid": "739" }, { "residue": "neuac", "count": 1, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197", "name": "N-Acetyl-Neuraminic Acid", "cid": "439197" }, { "residue": "dhex", "count": 1, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840", "name": "6-Deoxy-Hexose", "cid": "840" }, { "residue": "neugc", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001", "name": "N-Glycolyl-Neuraminic Acid", "cid": "440001" }, { "residue": "hexa", "count": 0, 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