{ "glycoprotein": [], "number_monosaccharides": 17, "inchi_key": {}, "classification": [ { "subtype": { "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=complex_N-glycan&jump_to_nav=true", "name": "Complex" }, "type": { "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true", "name": "N-linked" } }, { "subtype": { "name": "Core-fucosylated" }, "type": { "url": "http://bioportal.bioontology.org/ontologies/GLYCO/?p=classes&conceptid=N-glycan&jump_to_nav=true", "name": "N-linked" } } ], "mass_pme": 4203.11, "names": [], "fully_determined": "", "keywords": [], "wurcs": "WURCS=2.0/8,17,16/[a2122h-1x_1-5_2*NCC/3=O][a1221m-1x_1-5][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][axxxxh-1x_1-?_2*NCC/3=O][axxxxh-1x_1-?][Aad21122h-2x_2-6_5*NCC/3=O]/1-2-3-4-5-6-7-8-6-7-8-5-6-7-8-6-7/a4-c1_c4-d1_a?-b1_d?-e1_d?-l1_e?-f1_e?-i1_f?-g1_g?-h2_i?-j1_j?-k2_l?-m1_l?-p1_m?-n1_n?-o2_p?-q1", "species": [ { "common_name": "Human", "annotation_category": "Subsumption", "evidence": [ { "url": "https://www.glygen.org/glycan/G10470SE", "id": "G10470SE", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G42824AQ", "id": "G42824AQ", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G50489VC", "id": "G50489VC", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G86696LV", "id": "G86696LV", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G86753CK", "id": "G86753CK", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G88734GE", "id": "G88734GE", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G92574YO", "id": "G92574YO", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G99568AR", "id": "G99568AR", "database": "GNOme" } ], "taxid": 9606, "name": "Homo sapiens" }, { "common_name": "Rat", "annotation_category": "Subsumption", "evidence": [ { "url": "https://www.glygen.org/glycan/G88376OI", "id": "G88376OI", "database": "GNOme" } ], "taxid": 10116, "name": "Rattus norvegicus" }, { "common_name": "Mouse", "annotation_category": "Subsumption", "evidence": [ { "url": "https://www.glygen.org/glycan/G50489VC", "id": "G50489VC", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G86696LV", "id": "G86696LV", "database": "GNOme" }, { "url": "https://www.glygen.org/glycan/G86753CK", "id": "G86753CK", "database": "GNOme" } ], "taxid": 10090, "name": "Mus musculus" } ], "publication": [], "subsumption": [ { "type": "composition", "id": "G02256NN", "relationship": "composition" }, { "type": "basecomposition", "id": "G35280FV", "relationship": "basecomposition" }, { "type": "topology", "id": "G01716TC", "relationship": "topology" } ], "enzyme": [], "motifs": [], "glytoucan_ac": "G08690HO", "composition": [ { "residue": "s", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117", "name": "Sulfate", "cid": "1117" }, { "residue": "other", "count": 0, "name": "Other" }, { "residue": "p", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061", "name": "Phosphate", "cid": "1061" }, { "residue": "hexa", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610", "name": "Hexuronic Acid", "cid": "610" }, { "residue": "dhex", "count": 1, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840", "name": "6-Deoxy-Hexose", "cid": "840" }, { "residue": "neugc", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001", "name": "N-Glycolyl-Neuraminic Acid", "cid": "440001" }, { "residue": "neuac", "count": 3, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197", "name": "N-Acetyl-Neuraminic Acid", "cid": "439197" }, { "residue": "hexnac", "count": 6, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899", "name": "N-Acetylhexosamine", "cid": "899" }, { "residue": "hex", "count": 7, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206", "name": "Hexose", "cid": "206" }, { "residue": "hexn", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739", "name": "2-Amino-2-Deoxy-Hexose", "cid": "739" } ], "interactions": [], "residues": [], "glycam": "", "inchi": "", "crossref": [ { "url": "https://www.glygen.org/glycan/G08690HO", "id": "G08690HO", "database": "GNOme" }, { "url": "https://glytoucan.org/Structures/Glycans/G08690HO", "id": "G08690HO", "database": "GlyTouCan" } ], "tool_support": { "sandbox": "no", "gnome": "yes" }, "glycoct": "RES 1b:x-dglc-HEX-1:5 2b:x-lgal-HEX-1:5|6:d 3s:n-acetyl 4b:b-dglc-HEX-1:5 5s:n-acetyl 6b:b-dman-HEX-1:5 7b:a-dman-HEX-1:5 8b:x-HEX-x:x 9b:x-HEX-x:x 10b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12s:n-acetyl 13b:x-HEX-x:x 14b:x-HEX-x:x 15b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 16s:n-acetyl 17s:n-acetyl 18b:a-dman-HEX-1:5 19b:x-HEX-x:x 20b:x-HEX-x:x 21b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 22s:n-acetyl 23s:n-acetyl 24b:x-HEX-x:x 25b:x-HEX-x:x 26s:n-acetyl LIN 1:1o(-1+1)2d 2:1d(2+1)3n 3:1o(4+1)4d 4:4d(2+1)5n 5:4o(4+1)6d 6:6o(-1+1)7d 7:7o(-1+1)8d 8:8o(-1+1)9d 9:9o(-1+2)10d 10:10d(5+1)11n 11:8d(2+1)12n 12:7o(-1+1)13d 13:13o(-1+1)14d 14:14o(-1+2)15d 15:15d(5+1)16n 16:13d(2+1)17n 17:6o(-1+1)18d 18:18o(-1+1)19d 19:19o(-1+1)20d 20:20o(-1+2)21d 21:21d(5+1)22n 22:19d(2+1)23n 23:18o(-1+1)24d 24:24o(-1+1)25d 25:24d(2+1)26n", "iupac": "?-D-NeupAc-(2->?)-?-?-Hex?-(1->?)-?-?-Hex?NAc-(1->?)[?-D-NeupAc-(2->?)-?-?-Hex?-(1->?)-?-?-Hex?NAc-(1->?)]-alpha-D-Manp-(1->?)[?-D-NeupAc-(2->?)-?-?-Hex?-(1->?)-?-?-Hex?NAc-(1->?)[?-?-Hex?-(1->?)-?-?-Hex?NAc-(1->?)]-alpha-D-Manp-(1->?)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[?-L-Fucp-(1->?)]-?-D-GlcpNAc-(1->", "smiles_isomeric": "", "mass": 3390.2, "expression": [] }