{ "uniprot_canonical_ac": "A0A0G2KB27-1", "ptm_annotation": [], "sequence": { "header": "tr|A0A0G2KB27-1|A0A0G2KB27_RAT Isoform 1 of Nucleoporin 62 C-terminal-like OS=Rattus norvegicus OX=10116 GN=Nup62cl PE=4 SV=1 CANONICAL=A0A0G2KB27-1", "length": 273, "sequence": "MFPSTPYVPACMASQELSSTTSTTTTTTVTTNTTTTITSGFNLYLTPPASSPWLNNTGLINMASLPSTMTVNSIVTPVMTYGPLDSMVNNWHYQLQEQEKHYFYQAHQFNVWNHALIETSNEIALLHNEVERVKRDQSRLEQELDLILLQQKELEHTLAPIEEFLKEQNGPLKLLYVNKEYEMIYRLAEVIDADLKRMSQDLKDIIIYLNSVIRPADASEPLEQICRILSAHLESLQWISHNSGIMHKKVEEVAKAFEEYRRKGQDAMNVAFE" }, "uniprot_id": "A0A0G2KB27_RAT", "enzyme_annotation": [], "glycation": [], "keywords": [], "species": [ { "common_name": "Rat", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "id": "A0A0G2KB27", "database": "UniProtKB" } ], "name": "Rattus norvegicus", "taxid": 10116 } ], "publication": [], "uniprot_ac": "A0A0G2KB27", "site_annotation": [ { "end_pos": 34, "annotation": "n_glycosylation_sequon", "start_pos": 32 }, { "end_pos": 57, "annotation": "n_glycosylation_sequon", "start_pos": 55 } ], "isoforms": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27#A0A0G2KB27-1", "isoform_ac": "A0A0G2KB27-1", "locus": { "end_pos": 111334252, "strand": "+", "start_pos": 111365849, "chromosome": "X", "evidence": [ { "url": "https://www.ensembl.org/id/ENSRNOT00000088979", "id": "ENSRNOT00000088979", "database": "Ensembl Transcript" }, { "url": "https://www.ensembl.org/id/ENSRNOP00000075626", "id": "ENSRNOP00000075626", "database": "Ensembl Peptide" } ] }, "sequence": { "header": "tr|A0A0G2KB27-1|A0A0G2KB27_RAT Isoform 1 of Nucleoporin 62 C-terminal-like OS=Rattus norvegicus OX=10116 GN=Nup62cl PE=4 SV=1 CANONICAL=A0A0G2KB27-1", "length": 273, "sequence": "MFPSTPYVPACMASQELSSTTSTTTTTTVTTNTTTTITSGFNLYLTPPASSPWLNNTGLINMASLPSTMTVNSIVTPVMTYGPLDSMVNNWHYQLQEQEKHYFYQAHQFNVWNHALIETSNEIALLHNEVERVKRDQSRLEQELDLILLQQKELEHTLAPIEEFLKEQNGPLKLLYVNKEYEMIYRLAEVIDADLKRMSQDLKDIIIYLNSVIRPADASEPLEQICRILSAHLESLQWISHNSGIMHKKVEEVAKAFEEYRRKGQDAMNVAFE" } } ], "pathway": [ { "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:300923", "resource": "KEGG Pathway", "id": "rno:300923", "name": "" } ], "function": [], "orthologs": [ { "uniprot_canonical_ac": "A2AG10-1", "protein_name": "Nucleoporin 62 C-terminal-like", "sequence": { "length": 272, "sequence": "MFPSMPYVPASMASQELSSTTSTTTTTTVTTNTTTTITSGFNLYVRPPASPWLNNTGLINVASMPSTMTVNSIVTPVMTYGPLESMANNWHYQLQEQEKHYFYQANQFNLWNQALIESGNEIALLYNEVERVKIDQSRLEQELDIILFQQKELEQMLTPIEELLKEQNGPLNMMYVNKEYEMIYRLAEIIDAELKRMSQDLKDIVVYLNSLAHPADATEQLEQICKILNAHMESLQWINLNSGVMQKKVEEVANAVEEYRRKEQEAMKAAFE" }, "evidence": [ { "url": "http://www.informatics.jax.org/homology/78160", "id": "78160", "database": "MGI" }, { "url": "https://omabrowser.org/oma/group/A0A0G2KB27/", "id": "A0A0G2KB27", "database": "OMA" } ], "common_name": "Mouse", "organism": "Mus musculus", "tax_id": 10090 } ], "interactions": [], "synthesized_glycans": [], "snv": [], "cluster_types": [ { "name": "homologset.mgi", "label": "MGI Homologs" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "refseq": { "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006224518.1", "ac": "XP_006224518.1", "name": "nucleoporin-62 C-terminal-like protein", "summary": "" }, "go_annotation": { "categories": [ { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005543", "pmid": "21873635", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "id": "A0A0G2KB27", "database": "UniProtKB" } ], "name": "phospholipid binding", "id": "GO:0005543" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017056", "pmid": "21873635", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "id": "A0A0G2KB27", "database": "UniProtKB" } ], "name": "structural constituent of nuclear pore", "id": "GO:0017056" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015288", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "id": "A0A0G2KB27", "database": "UniProtKB" } ], "name": "porin activity", "id": "GO:0015288" } ], "total": 3, "name": "Molecular Function" }, { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044613", "pmid": "21873635", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "id": "A0A0G2KB27", "database": "UniProtKB" } ], "name": "nuclear pore central transport channel", "id": "GO:0044613" }, { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046930", "pmid": "", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "id": "A0A0G2KB27", "database": "UniProtKB" } ], "name": "pore complex", "id": "GO:0046930" } ], "total": 2, "name": "Cellular Component" }, { "go_terms": [ { "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006606", "pmid": "21873635", "evidence": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "id": "A0A0G2KB27", "database": "UniProtKB" } ], "name": "protein import into nucleus", "id": "GO:0006606" } ], "total": 1, "name": "Biological Process" } ] }, "gene_names": [ { "url": "https://www.ncbi.nlm.nih.gov/protein/A0A0G2KB27", "type": "synonym", "resource": "RefSeq", "name": "Nup62cl" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "type": "recommended", "resource": "UniProtKB", "name": "Nup62cl" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "type": "synonym", "resource": "UniProtKB", "name": "RGD1564353_predicted" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "type": "synonym", "resource": "UniProtKB", "name": "rCG_26565" } ], "crossref": [ { "url": "https://bgee.org/?page=gene&gene_id=ENSRNOG00000057753", "id": "ENSRNOG00000057753", "database": "Bgee" }, { "url": "https://www.ncbi.nlm.nih.gov/gene/300923", "id": "300923", "database": "GeneID" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR007758", "id": "IPR007758", "database": "InterPro" }, { "url": "https://www.ebi.ac.uk/interpro/entry/IPR026010", "id": "IPR026010", "database": "InterPro" }, { "url": "https://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+rno:300923", "id": "rno:300923", "database": "KEGG Pathway" }, { "url": "https://omabrowser.org/oma/group/WISHNSG/", "id": "WISHNSG", "database": "OMA" }, { "url": "http://www.orthodb.org/?query=1420505at2759", "id": "1420505at2759", "database": "OrthoDB" }, { "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12084", "id": "PTHR12084", "database": "PANTHER" }, { "url": "http://pfam.xfam.org/family/PF05064", "id": "PF05064", "database": "Pfam" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/XP_006224518.1", "id": "XP_006224518.1", "database": "RefSeq" }, { "url": "http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=1564353", "id": "1564353", "database": "RGD" } ], "expression_disease": [], "glycosylation": [], "mutagenesis": [], "disease": [], "phosphorylation": [], "mass": { "monoisotopic_mass": 31284.0, "chemical_mass": 31284.0 }, "expression_tissue": [], "gene": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "name": "Nup62cl", "locus": { "end_pos": 111334252, "strand": "-", "start_pos": 111365849, "chromosome": "X", "evidence": [ { "url": "https://www.ensembl.org/id/ENSRNOG00000057753", "id": "ENSRNOG00000057753", "database": "Ensembl Gene" } ] } } ], "protein_names": [ { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "type": "synonym", "resource": "UniProtKB", "name": "Nucleoporin 62 C-terminal-like" }, { "url": "https://www.uniprot.org/uniprot/A0A0G2KB27", "type": "synonym", "resource": "UniProtKB", "name": "Similar to Nucleoporin 62 (Predicted)" }, { "url": "https://www.ncbi.nlm.nih.gov/protein/A0A0G2KB27", "type": "synonym", "resource": "RefSeq", "name": "nucleoporin-62 C-terminal-like protein" } ] }