{ "bcoid": "GLY_000506", "title": "SARS-CoV2 Glycosylation Unique to Data sources", "description": "", "filename": "sarscov2_proteoform_glycosylation_unique_sources.csv", "filetype": "csv", "categories": { "species": "SARS coronavirus (SARS-CoV-2 or 2019-nCoV)", "molecule": "Proteoform", "tags": "Unique Glycosylation Sites", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "P0DTC2-1...", "1074..." ], [ "P0DTC2-1...", "1074..." ] ], "headers": [ "uniprotkb_ca...", "glycosylatio..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "glycosylation_site_uniprotkb" }, { "type": "string", "label": "saccharide" }, { "type": "string", "label": "glycosylation_type" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "uniqueness_flag" } ], [ "P0DTC2-1", "1074", "G00194GV", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G00194GV", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G01650EU", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G01650EU", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G02815KT", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G02815KT", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G02815KT", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G03574QJ", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G03574QJ", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G05428EU", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G05428EU", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G05428EU", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G05460KC", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G05460KC", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G06042JP", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G06042JP", "n-linked", "protein_xref_pubmed", "32518941", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G06042JP", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G08293MJ", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G08293MJ", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G09528DL", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G09528DL", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G10339FR", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G10339FR", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G10339FR", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G10486CT", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G10486CT", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G15486FH", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G15486FH", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G15486FH", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G16407EV", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G16407EV", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G20956ZV", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G20956ZV", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G20956ZV", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G21726WW", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G21726WW", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G25987BV", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G25987BV", "n-linked", "protein_xref_pubmed", "32363391", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G25987BV", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G25987BV", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G27391WQ", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G27391WQ", "n-linked", "protein_xref_pubmed", "32518941", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G27391WQ", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G27622TD", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G27622TD", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G28541PG", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G28541PG", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G28681TP", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G28681TP", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G28681TP", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G28997IA", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G28997IA", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G29068FM", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G29068FM", "n-linked", "protein_xref_pubmed", "32518941", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G29068FM", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G31852PQ", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G31852PQ", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G31852PQ", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G35029YA", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G35029YA", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G35029YA", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G38769OU", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G38769OU", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G39446WN", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G39446WN", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G39446WN", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G41247ZX", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G41247ZX", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G41247ZX", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G43638QT", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G43638QT", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G44953PJ", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G44953PJ", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G45504EY", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G45504EY", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G49955PK", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G49955PK", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G50073PQ", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G50073PQ", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G51210WZ", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G51210WZ", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G53434XO", "n-linked", "protein_xref_doi", "10.1101/2020.03.28.013276v2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G53434XO", "n-linked", "protein_xref_unicarbkb", "P0DTC2", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ], [ "P0DTC2-1", "1074", "G54600FO", "n-linked", "protein_xref_pubmed", "32366695", "protein_xref_unicarbkb", "P0DTC2", "unique-site-with-glycan-to-unicarbkb" ] ] }, "readme": "Name\n - SARS-CoV2 Glycosylation Unique to Data sources\n\nVersion\n - 1.7.10\n\nCreated on\n - 2020-06-04T10:46:09.954822\n\nModified on\n - \n\nCreated by\n - [jeetvora@gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n\nI/O Domain\n Output Subdomain\n Name: sarscov2_proteoform_glycosylation_unique_sources.csv\n URI: http://data.glygen.org/datasets/reviewed/sarscov2_proteoform_glycosylation_unique_sources.csv\n Name: sarscov2_proteoform_glycosylation_unique_sources.stat.csv\n URI: http://data.glygen.org/datasets/reviewed/sarscov2_proteoform_glycosylation_unique_sources.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"2\"\n Name: \"glycosylation_site_uniprotkb\"\n Description: \"Site on the protein sequence of the UniProtKB entry where glycosylation is observed\"\n Unique Values: \"26\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"8\"\n Name: \"uniqueness_flag\"\n Description: \"\"\n Unique Values: \"5\"\n Name: \"glycosylation_type\"\n Description: \"Type of glycosylation (N/O/C/S linked glycosylation)\"\n Unique Values: \"2\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"2\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"2\"\n Name: \"saccharide\"\n Description: \"Sugar\"\n Unique Values: \"200\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"5\"", "downloadurl": "/ln2data/releases/data/v-1.7.10/reviewed/sarscov2_proteoform_glycosylation_unique_sources.csv" }