{
    "bcoid": "GLY_000478",
    "title": "Glycan Subsumption",
    "description": "The dataset provides relationship between the glycans (identified by the GlyTouCan accession). The relation ...",
    "filename": "glycan_subsumption.csv",
    "filetype": "csv",
    "categories": {
        "molecule": "Glycan",
        "tags": "subsumption",
        "status": "Reviewed",
        "file_type": "csv",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "G00002CF...",
                "Ancestor..."
            ],
            [
                "G00002CF...",
                "Ancestor..."
            ]
        ],
        "headers": [
            "glytoucan_ac...",
            "relationship..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "relationship"
                },
                {
                    "type": "string",
                    "label": "related_accession"
                }
            ],
            [
                "G00002CF",
                "Ancestor",
                "G14402CS"
            ],
            [
                "G00002CF",
                "Ancestor",
                "G28882EF"
            ],
            [
                "G00002CF",
                "Ancestor",
                "G35219UR"
            ],
            [
                "G00002CF",
                "Ancestor",
                "G48736CB"
            ],
            [
                "G00002CF",
                "Ancestor",
                "G83963YB"
            ],
            [
                "G00002CF",
                "Ancestor",
                "G93218EI"
            ],
            [
                "G00002CF",
                "Descendant",
                "G84891DZ"
            ],
            [
                "G00002CF",
                "Descendant",
                "G86094NY"
            ],
            [
                "G00002CF",
                "SubsumedBy",
                "G14402CS"
            ],
            [
                "G00002CF",
                "SubsumedBy",
                "G48736CB"
            ],
            [
                "G00002CF",
                "Subsumes",
                "G86094NY"
            ],
            [
                "G00009BX",
                "Ancestor",
                "G12332GO"
            ],
            [
                "G00009BX",
                "Ancestor",
                "G40076YB"
            ],
            [
                "G00009BX",
                "Ancestor",
                "G71784JC"
            ],
            [
                "G00009BX",
                "Ancestor",
                "G93579XB"
            ],
            [
                "G00009BX",
                "Ancestor",
                "G97996TJ"
            ],
            [
                "G00009BX",
                "Descendant",
                "G29703NT"
            ],
            [
                "G00009BX",
                "Descendant",
                "G81697WS"
            ],
            [
                "G00009BX",
                "SubsumedBy",
                "G97996TJ"
            ],
            [
                "G00009BX",
                "Subsumes",
                "G81697WS"
            ],
            [
                "G00012MO",
                "Ancestor",
                "G08590QR"
            ],
            [
                "G00012MO",
                "Ancestor",
                "G15216HY"
            ],
            [
                "G00012MO",
                "Ancestor",
                "G29964CE"
            ],
            [
                "G00012MO",
                "Ancestor",
                "G49958GL"
            ],
            [
                "G00012MO",
                "Ancestor",
                "G53509NM"
            ],
            [
                "G00012MO",
                "Ancestor",
                "G82558IX"
            ],
            [
                "G00012MO",
                "Descendant",
                "G19926LY"
            ],
            [
                "G00012MO",
                "Descendant",
                "G57710SU"
            ],
            [
                "G00012MO",
                "SubsumedBy",
                "G15216HY"
            ],
            [
                "G00012MO",
                "SubsumedBy",
                "G29964CE"
            ],
            [
                "G00012MO",
                "Subsumes",
                "G19926LY"
            ],
            [
                "G00012RZ",
                "Ancestor",
                "G01087FD"
            ],
            [
                "G00012RZ",
                "Ancestor",
                "G04784US"
            ],
            [
                "G00012RZ",
                "Ancestor",
                "G15037AY"
            ],
            [
                "G00012RZ",
                "Ancestor",
                "G20312EM"
            ],
            [
                "G00012RZ",
                "Ancestor",
                "G28989NC"
            ],
            [
                "G00012RZ",
                "Ancestor",
                "G74930DK"
            ],
            [
                "G00012RZ",
                "Ancestor",
                "G80075MS"
            ],
            [
                "G00012RZ",
                "SubsumedBy",
                "G15037AY"
            ],
            [
                "G00013MO",
                "Ancestor",
                "G17425SJ"
            ],
            [
                "G00013MO",
                "Ancestor",
                "G24521PI"
            ],
            [
                "G00013MO",
                "Ancestor",
                "G65968NT"
            ],
            [
                "G00013MO",
                "Ancestor",
                "G90306QO"
            ],
            [
                "G00013MO",
                "Descendant",
                "G99042JP"
            ],
            [
                "G00013MO",
                "SubsumedBy",
                "G24521PI"
            ],
            [
                "G00013MO",
                "Subsumes",
                "G99042JP"
            ],
            [
                "G00014MO",
                "Ancestor",
                "G12014ZL"
            ],
            [
                "G00014MO",
                "Ancestor",
                "G46396AV"
            ],
            [
                "G00014MO",
                "Ancestor",
                "G53434XO"
            ],
            [
                "G00014MO",
                "Ancestor",
                "G65171UV"
            ],
            [
                "G00014MO",
                "Descendant",
                "G40793GY"
            ],
            [
                "G00014MO",
                "SubsumedBy",
                "G12014ZL"
            ],
            [
                "G00014MO",
                "Subsumes",
                "G40793GY"
            ],
            [
                "G00015MO",
                "Ancestor",
                "G08590QR"
            ],
            [
                "G00015MO",
                "Ancestor",
                "G12630GO"
            ],
            [
                "G00015MO",
                "Ancestor",
                "G23069WI"
            ],
            [
                "G00015MO",
                "Descendant",
                "G32665EN"
            ],
            [
                "G00015MO",
                "Descendant",
                "G88435BP"
            ],
            [
                "G00015MO",
                "SubsumedBy",
                "G23069WI"
            ],
            [
                "G00015MO",
                "Subsumes",
                "G88435BP"
            ],
            [
                "G00016MO",
                "Ancestor",
                "G10694RB"
            ],
            [
                "G00016MO",
                "Ancestor",
                "G20773IW"
            ],
            [
                "G00016MO",
                "Ancestor",
                "G61666PA"
            ],
            [
                "G00016MO",
                "Ancestor",
                "G71858IU"
            ],
            [
                "G00016MO",
                "Ancestor",
                "G90627TW"
            ],
            [
                "G00016MO",
                "Ancestor",
                "G90960QG"
            ],
            [
                "G00016MO",
                "Descendant",
                "G54046EC"
            ],
            [
                "G00016MO",
                "Descendant",
                "G62763GO"
            ],
            [
                "G00016MO",
                "Descendant",
                "G67988RO"
            ],
            [
                "G00016MO",
                "SubsumedBy",
                "G61666PA"
            ],
            [
                "G00016MO",
                "Subsumes",
                "G62763GO"
            ],
            [
                "G00017MO",
                "Ancestor",
                "G08485QG"
            ],
            [
                "G00017MO",
                "Ancestor",
                "G33623LN"
            ],
            [
                "G00017MO",
                "Ancestor",
                "G54898GA"
            ],
            [
                "G00017MO",
                "Ancestor",
                "G67281OF"
            ],
            [
                "G00017MO",
                "Ancestor",
                "G81929CN"
            ],
            [
                "G00017MO",
                "Descendant",
                "G27725RJ"
            ],
            [
                "G00017MO",
                "Descendant",
                "G42003FG"
            ],
            [
                "G00017MO",
                "Descendant",
                "G48124SB"
            ],
            [
                "G00017MO",
                "Descendant",
                "G93263XO"
            ],
            [
                "G00017MO",
                "SubsumedBy",
                "G54898GA"
            ],
            [
                "G00017MO",
                "SubsumedBy",
                "G81929CN"
            ],
            [
                "G00017MO",
                "Subsumes",
                "G27725RJ"
            ],
            [
                "G00018MO",
                "Ancestor",
                "G27961HI"
            ]
        ]
    },
    "readme": "Name\n   - Glycan Subsumption\n\nVersion\n   - 1.7.10\n\nCreated on\n  - 2020-04-20T15:34:55.646138\n\nModified on\n   - 2020-05-01T15:28:21.873184\n\nCreated by\n   - Rahi Navelkar [rsn13@gwu.edu], Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu]\n\nAuthors\n   - Nathan Edwards [nje5@georgetown.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The dataset provides relationship between the glycans (identified by the GlyTouCan accession). The relation is categorized as either Ancestor, Descendant, SubsumedBy or Subsumes. The listed GlyTouCan Accessions are derived from the GlyTouCan accession master list (https://data.glygen.org/GLYDS000281).\n\nDescription Domain\n   Keywords\n   - Glycan\n   - GlyTouCan Accession\n   - Subsumption\n   - ID/Accession Mapping\n\n   Pipeline Steps\n   - Step-1: The input file was downloaded from the provider and a python script is used to extract the data for the GlyTouCan accessions based on the acession master list. Refer to the usability domain for more information on master list.\n\nExecution Domain\n   Scripts   - \n\n\n   Software Prerequisites\n      Name: \n      Version: \n      URI: \n\nI/O Domain\n   Input Subdomain\n      Name: subsumption.tsv\n      URI: https://data.glygen.org/ln2data/releases/data/v-1.7.10/source/subsumption.tsv\n   Output Subdomain\n      Name: glycan_subsumption.csv\n      URI: http://data.glygen.org/ln2data/releases/data/v-1.7.10/reviewed/glycan_subsumption.csv\n      Name: glycan_subsumption.stat.csv\n      URI: http://data.glygen.org/ln2data/releases/data/v-1.7.10/reviewed/glycan_subsumption.stat.csv\n\nFields\n      Name: \"related_accession\"\n     Description: \"\" GlyTouCan accession associated based on the \"\"relationship\"\" of th glycan\"\"\n      Unique Values: \"31786\"\n      Name: \"glytoucan_ac\"\n     Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n      Unique Values: \"31786\"\n      Name: \"relationship\"\n     Description: \" Relationship of the glycan\"\n      Unique Values: \"4\"",
    "downloadurl": "/ln2data/releases/data/v-1.7.10/reviewed/glycan_subsumption.csv"
}