{ "bcoid": "GLY_000500", "title": "Human Glycosylation Unique to Data sources", "description": "", "filename": "human_proteoform_glycosylation_unique_sources.csv", "filetype": "csv", "categories": { "species": "Homo sapiens", "molecule": "Proteoform", "tags": "Unique Glycosylation Sites", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "Q15417-1...", "240..." ], [ "Q8N695-1...", "498..." ] ], "headers": [ "uniprotkb_ca...", "glycosylatio..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "glycosylation_site_uniprotkb" }, { "type": "string", "label": "amino_acid" }, { "type": "string", "label": "saccharide" }, { "type": "string", "label": "glycosylation_type" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "uniqueness_flag" } ], [ "Q15417-1", "240", "Asn", "", "N-Linked", "protein_xref_glyconnect", "1059", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "Q8N695-1", "498", "Thr", "G57317CE", "o-linked", "protein_xref_unicarbkb", "Q8N695", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P02724-1", "31", "Thr", "G00031MO", "o-linked", "protein_xref_pubmed", "6190803", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P02724-1", "63", "Ser", "G01614ZM", "o-linked", "protein_xref_pubmed", "6619126", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P60568-1", "23", "Thr", "G65562ZE", "O-Linked", "protein_xref_pubmed", "3935432", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "P0DN86-1", "33", "Asn", "G69411IG", "n-linked", "protein_xref_pubmed", "468798", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P02724-1", "30", "Ser", "G47180UC", "o-linked", "protein_xref_unicarbkb", "P02724", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P16150-1", "47", "Thr", "G00031MO", "o-linked", "protein_xref_pubmed", "6725284", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q9NPA1-1", "131", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9NPA1", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q14767-1", "267", "Ser", "G43417UB", "o-linked", "protein_xref_pubmed", "30459171", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q92485-1", "164", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q92485", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P00738-1", "241", "Asn", "G07799LX", "N-linked", "protein_xref_gptwiki", "P00738", "unique site to gptwiki, unique glycoprotein to gptwiki" ], [ "O43657-1", "134", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O43657", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P01588-1", "51", "Asn", "G33284WZ", "n-linked", "protein_xref_pubmed", "8460945", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q99983-1", "242", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q99983", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P08603-1", "882", "Asn", "G27947YN", "N-linked", "protein_xref_gptwiki", "P08603", "unique site to gptwiki, unique glycoprotein to gptwiki" ], [ "Q9NZU0-1", "226", "Asn", "", "N-Linked", "protein_xref_glyconnect", "1454", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "P00750-1", "483", "Asn", "G09482NW", "n-linked", "protein_xref_pubmed", "8687384", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q02818-1", "51", "Tyr", "", "o-linked", "protein_xref_pubmed", "23584533", "unique site to tyr_o_linked, unique glycoprotein to tyr_o_linked" ], [ "Q9C0A0-1", "359", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9C0A0", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q01638-1", "232", "Asn", "", "n-linked", "protein_xref_glygen_ds", "GLYDS000143", "unique site to literature, unique glycoprotein to literature" ], [ "P02750-1", "186", "Asn", "", "n-linked", "protein_xref_pubmed", "24279413", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q8NHU0-1", "97", "Asn", "", "n-linked", "protein_xref_pubmed", "24190977", "unique site to literature, unique glycoprotein to literature" ], [ "P01730-1", "325", "Asn", "G53450AF", "n-linked", "protein_xref_unicarbkb", "P01730", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q96RN1-1", "192", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q96RN1", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P01877-1", "205", "Asn", "G12580WI", "n-linked", "protein_xref_unicarbkb", "P01877", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P14778-1", "193", "Asn", "", "n-linked", "protein_xref_pubmed", "23090970", "unique site to literature, unique glycoprotein to literature" ], [ "Q12913-1", "937", "Asn", "", "n-linked", "protein_xref_pubmed", "24190977", "unique site to literature, unique glycoprotein to literature" ], [ "P08603-1", "217", "Asn", "G47737VJ", "N-linked", "protein_xref_gptwiki", "P08603", "unique site to gptwiki, unique glycoprotein to gptwiki" ], [ "P11047-1", "1439", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P11047", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q13444-1", "237", "Asn", "", "N-Linked", "protein_xref_glyconnect", "1179", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "P15586-1", "405", "Asn", "", "n-linked", "protein_xref_pubmed", "23090970", "unique site to literature, unique glycoprotein to literature" ], [ "P02724-1", "23", "Thr", "G94435QH", "o-linked", "protein_xref_pubmed", "8384526", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q6UWV6-1", "267", "Asn", "", "N-linked", "protein_xref_pdb", "5TCD", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P10909-1", "374", "Asn", "G06247RL", "n-linked", "protein_xref_unicarbkb", "P10909", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P0C0L4-1", "226", "Asn", "G62765YT", "n-linked", "protein_xref_pubmed", "29671580", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P21815-1", "239", "Thr", "", "O-linked", "protein_xref_uniprotkb_gly", "P21815", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q14624-1", "722", "Thr", "G58001LT", "o-linked", "protein_xref_pubmed", "26598643", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P02786-1", "251", "Asn", "", "N-linked", "protein_xref_pubmed", "16335952", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q6UXB8-1", "114", "Asn", "", "n-linked", "protein_xref_pubmed", "23090970", "unique site to literature, unique glycoprotein to literature" ], [ "Q04900-1", "142", "Ser", "", "O-linked", "protein_xref_uniprotkb_gly", "Q04900", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P06276-1", "509", "Asn", "", "N-Linked", "protein_xref_pubmed", "29391424", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "O43280-1", "239", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O43280", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P01229-1", "50", "Asn", "G49743VF", "N-Linked", "protein_xref_glyconnect", "350", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "Q14112-1", "475", "Thr", "G43417UB", "o-linked", "protein_xref_pubmed", "30459171", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q9UN76-1", "202", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9UN76", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P01876-1", "340", "Asn", "G83646BJ", "n-linked", "protein_xref_pubmed", "29671580", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P02771-1", "251", "Asn", "G50353PP", "n-linked", "protein_xref_pubmed", "1694115", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P04275-1", "666", "Asn", "G22018FP", "n-linked", "protein_xref_pubmed", "23345538", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P07288-1", "69", "Asn", "G14176QY", "n-linked", "protein_xref_pubmed", "17956937", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q12794-1", "350", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q12794", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "O75019-1", "140", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O75019", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q9Y666-1", "312", "Asn", "", "N-Linked", "protein_xref_glyconnect", "1763", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "Q9NZ53-1", "144", "Ser", "G43417UB", "o-linked", "protein_xref_unicarbkb", "Q9NZ53", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q92854-1", "379", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q92854", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P31431-1", "63", "Ser", "", "O-linked", "protein_xref_uniprotkb_gly", "P31431", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P08236-1", "631", "Asn", "", "n-linked", "protein_xref_glygen_ds", "GLYDS000143", "unique site to literature, unique glycoprotein to literature" ], [ "P20774-1", "258", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P20774", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q14624-1", "81", "Asn", "", "n-linked", "protein_xref_pubmed", "23090970", "unique site to literature, unique glycoprotein to literature" ], [ "P06870-1", "165", "Asn", "G88461FF", "n-linked", "protein_xref_unicarbkb", "P06870", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P12259-1", "805", "Thr", "G29068FM", "o-linked", "protein_xref_pubmed", "30459171", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P00450-1", "138", "Asn", "G66665YI", "n-linked", "protein_xref_unicarbkb", "P00450", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q9H330-2", "551", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9H330", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q6P179-1", "219", "Asn", "", "N-linked", "protein_xref_pdb4glycosylation", "5K1V", "unique site to pdb, unique glycoprotein to pdb" ], [ "Q08380-1", "551", "Asn", "", "N-linked", "protein_xref_pubmed", "19139490", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q16610-1", "530", "Asn", "G77380JK", "n-linked", "protein_xref_pubmed", "26791533", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "Q08629-1", "286", "Asn", "", "n-linked", "protein_xref_glygen_ds", "GLYDS000143", "unique site to literature, unique glycoprotein to literature" ], [ "O75445-1", "2258", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O75445", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P00533-1", "444", "Asn", "", "N-linked", "protein_xref_pdb", "1IVO", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P02724-1", "44", "Thr", "G94217FB", "o-linked", "protein_xref_unicarbkb", "P02724", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P22304-1", "513", "Asn", "", "N-linked", "protein_xref_pdb", "5FQL", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "Q9P2N5-1", "546", "Ser", "G70994MS", "o-linked", "protein_xref_glygen_ds", "GLYDS000142", "unique site to harvard, unique glycoprotein to harvard" ], [ "Q92542-1", "187", "Asn", "", "N-linked", "protein_xref_pubmed", "26280335", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P02724-1", "31", "Thr", "G16370GQ", "o-linked", "protein_xref_pubmed", "3514617", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P02790-1", "24", "Thr", "", "O-linked", "protein_xref_pubmed", "19838169", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "O94955-1", "407", "Asn", "", "N-Linked", "protein_xref_glyconnect", "1717", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "Q7KZ85-1", "1526", "Ser", "G70994MS", "o-linked", "protein_xref_pubmed", "29351928", "unique site to harvard, unique glycoprotein to harvard" ], [ "Q9P2B2-1", "286", "Asn", "", "N-Linked", "protein_xref_pubmed", "29741879", "unique site to glyconnect, unique glycoprotein to glyconnect" ], [ "Q9NQ35-1", "72", "Asn", "G58001LT", "n-linked", "protein_xref_unicarbkb", "Q9NQ35", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P49848-1", "595", "Thr", "G70994MS", "o-linked", "protein_xref_pubmed", "29351928", "unique site to harvard, unique glycoprotein to harvard" ], [ "P27169-1", "253", "Asn", "G99679NM", "n-linked", "protein_xref_pubmed", "29671580", "unique site to unicarbkb, unique glycoprotein to unicarbkb" ], [ "P40199-1", "115", "Asn", "", "n-linked", "protein_xref_pubmed", "24190977", "unique site to literature, unique glycoprotein to literature" ], [ "P31997-1", "104", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P31997", "unique site to uniprotkb, unique glycoprotein to uniprotkb" ], [ "P32926-1", "545", "Asn", "", "n-linked", "protein_xref_pubmed", "24190977", "unique site to literature, unique glycoprotein to literature" ] ] }, "readme": "Name\n - Human Glycosylation Unique to Data sources\n\nVersion\n - 1.5.30\n\nCreated on\n - 2020-06-04T09:44:08.947606\n\nModified on\n - 2020-06-04T10:09:49.041370\n\nCreated by\n - [jeetvora@gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n\nI/O Domain\n Output Subdomain\n Name: human_proteoform_glycosylation_unique_sources.csv\n URI: http://data.glygen.org/datasets/reviewed/human_proteoform_glycosylation_unique_sources.csv\n Name: human_proteoform_glycosylation_unique_sources.stat.csv\n URI: http://data.glygen.org/datasets/reviewed/human_proteoform_glycosylation_unique_sources.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"Accession assigned to the protein isoform chosen to be the canonical sequence to which all positional annotation refers in UniProtKB database\"\n Unique Values: \"5248\"\n Name: \"glycosylation_site_uniprotkb\"\n Description: \"Site on the protein sequence of the UniProtKB entry where glycosylation is observed\"\n Unique Values: \"2709\"\n Name: \"xref_id\"\n Description: \"\"\n Unique Values: \"7921\"\n Name: \"glycosylation_type\"\n Description: \"Type of glycosylation (N/O/C/S linked glycosylation)\"\n Unique Values: \"8\"\n Name: \"amino_acid\"\n Description: \"Three letter abbreviation code of the amino acid\"\n Unique Values: \"9\"\n Name: \"uniqueness_flag\"\n Description: \"\"\n Unique Values: \"9\"\n Name: \"saccharide\"\n Description: \"Sugar\"\n Unique Values: \"922\"\n Name: \"xref_key\"\n Description: \"\"\n Unique Values: \"11\"", "downloadurl": "/ln2data/releases/data/v-1.5.30/reviewed/human_proteoform_glycosylation_unique_sources.csv" }