{ "bcoid": "GLY_000288", "title": "Glycan Sequences GlycoCT", "description": "The dataset provides the glycan sequences in GlycoCT format for the associated glycans (GlyTouCan Accession). ...", "filename": "glycan_sequences_glycoct.csv", "filetype": "csv", "categories": { "molecule": "Glycan", "tags": "GlycoCT sequence format", "status": "Reviewed", "file_type": "csv", "scope": "internal" }, "minitable": { "content": [ [ "G00002CF...", "RES\\n1b:x-dg..." ], [ "G00009BX...", "RES\\n1b:x-dg..." ] ], "headers": [ "glytoucan_ac...", "sequence_gly..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "glytoucan_ac" }, { "type": "string", "label": "sequence_glycoct" } ], [ "G00002CF", "RES\\n1b:x-dglc-HEX-1:5\\n2b:x-dgal-HEX-1:5\\n3b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n4s:n-glycolyl\\n5b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n6s:n-glycolyl\\nLIN\\n1:1o(-1+1)2d\\n2:2o(-1+2)3d\\n3:3d(5+1)4n\\n4:3o(-1+2)5d\\n5:5d(5+1)6n" ], [ "G00009BX", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:b-dglc-HEX-1:5\\n5s:n-acetyl\\n6b:b-dgal-HEX-1:5\\n7b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(3+1)4d\\n4:4d(2+1)5n\\n5:4o(4+1)6d\\n6:6o(2+1)7d" ], [ "G00012MO", "RES\\n1b:x-dglc-HEX-x:x\\n2b:b-dgal-HEX-1:5\\n3b:a-dgal-HEX-1:5\\n4b:b-dgal-HEX-1:5\\n5s:n-acetyl\\nLIN\\n1:1o(4+1)2d\\n2:2o(3+1)3d\\n3:3o(3+1)4d\\n4:4d(2+1)5n" ], [ "G00012RZ", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dman-HEX-1:5\\n6b:a-dman-HEX-1:5\\n7b:a-dman-HEX-1:5\\n8b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5o(3+1)6d\\n6:5o(6+1)7d\\n7:1o(6+1)8d\\nUND\\nUND1:100.0:100.0\\nParentIDs:1|3|5|6|7|8\\nSubtreeLinkageID1:x(-1+1)x\\nRES\\n9b:b-dglc-HEX-1:5\\n10s:n-acetyl\\n11b:a-lgal-HEX-1:5|6:d\\n12b:b-dgal-HEX-1:5\\n13b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n14s:n-acetyl\\nLIN\\n8:9d(2+1)10n\\n9:9o(3+1)11d\\n10:9o(4+1)12d\\n11:12o(-1+2)13d\\n12:13d(5+1)14n\\nUND2:100.0:100.0\\nParentIDs:1|3|5|6|7|8\\nSubtreeLinkageID1:x(-1+1)x\\nRES\\n15b:b-dglc-HEX-1:5\\n16s:n-acetyl\\n17b:a-lgal-HEX-1:5|6:d\\n18b:b-dgal-HEX-1:5\\nLIN\\n13:15d(2+1)16n\\n14:15o(3+1)17d\\n15:15o(4+1)18d\\nUND3:100.0:100.0\\nParentIDs:1|3|5|6|7|8\\nSubtreeLinkageID1:x(-1+1)x\\nRES\\n19b:b-dglc-HEX-1:5\\n20s:n-acetyl\\n21b:b-dgal-HEX-1:5\\nLIN\\n16:19d(2+1)20n\\n17:19o(4+1)21d" ], [ "G00013MO", "RES\\n1b:x-dglc-HEX-x:x\\n2b:b-dgal-HEX-1:5\\n3b:b-dgal-HEX-1:5\\n4b:b-dgal-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(4+1)3d\\n3:3o(3+1)4d" ], [ "G00014MO", "RES\\n1b:x-dglc-HEX-x:x\\n2b:b-dman-HEX-1:5\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\n6s:n-acetyl\\nLIN\\n1:1o(4+1)2d\\n2:2o(3+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5d(2+1)6n" ], [ "G00015MO", "RES\\n1b:x-dglc-HEX-x:x\\n2b:b-dman-HEX-1:5\\n3b:a-dman-HEX-1:5\\n4b:b-dglc-HEX-1:5\\n5s:n-acetyl\\nLIN\\n1:1o(4+1)2d\\n2:2o(3+1)3d\\n3:3o(2+1)4d\\n4:4d(2+1)5n" ], [ "G00016MO", "RES\\n1b:x-dgal-HEX-x:x\\n2b:a-dgal-HEX-1:5\\nLIN\\n1:1o(4+1)2d" ], [ "G00017MO", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5|6:a\\n4b:b-dglc-HEX-1:5\\n5s:n-acetyl\\n6b:b-dglc-HEX-1:5|6:a\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3o(4+1)4d\\n4:4d(2+1)5n\\n5:4o(3+1)6d" ], [ "G00018MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5|6:a\\n4b:b-dgal-HEX-1:5\\n5s:n-acetyl\\n6b:b-dglc-HEX-1:5|6:a\\n7s:sulfate\\n8s:sulfate\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3o(4+1)4d\\n4:4d(2+1)5n\\n5:4o(3+1)6d\\n6:4o(4+1)7n\\n7:1o(4+1)8n" ], [ "G00019MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:b-dido-HEX-1:5|6:a\\n4b:b-dgal-HEX-1:5\\n5s:n-acetyl\\n6b:b-dido-HEX-1:5|6:a\\n7s:sulfate\\n8s:sulfate\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3o(4+1)4d\\n4:4d(2+1)5n\\n5:4o(3+1)6d\\n6:4o(4+1)7n\\n7:1o(4+1)8n" ], [ "G00020MO", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:b-dglc-HEX-1:5\\n5s:n-acetyl\\n6b:b-dgal-HEX-1:5\\n7s:sulfate\\n8s:sulfate\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(3+1)4d\\n4:4d(2+1)5n\\n5:4o(4+1)6d\\n6:4o(6+1)7n\\n7:1o(6+1)8n" ], [ "G00021MO", "RES\\n1b:x-dglc-HEX-x:x\\n2s:sulfate\\n3s:n-acetyl\\n4b:a-dido-HEX-1:5|6:a\\n5s:sulfate\\n6b:b-dglc-HEX-1:5\\n7s:sulfate\\n8s:n-acetyl\\n9b:a-dido-HEX-1:5|6:a\\n10s:sulfate\\n11s:sulfate\\nLIN\\n1:1o(-1+1)2n\\n2:1d(2+1)3n\\n3:1o(4+1)4d\\n4:4o(2+1)5n\\n5:4o(4+1)6d\\n6:6o(-1+1)7n\\n7:6d(2+1)8n\\n8:6o(4+1)9d\\n9:6o(6+1)10n\\n10:1o(6+1)11n" ], [ "G00022MO", "RES\\n1b:x-dglc-HEX-1:5\\n2s:amino\\n3b:b-dglc-HEX-1:5\\n4s:amino\\n5b:b-dman-OCT-2:6|1:a|2:keto|3:d\\n6b:x-HEP-x:x\\n7b:x-HEP-x:x\\n8b:x-HEP-x:x\\n9b:x-HEP-x:x\\n10b:x-dman-OCT-2:6|1:a|2:keto|3:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(6+1)3d\\n3:3d(2+1)4n\\n4:3o(6+2)5d\\n5:5o(-1+-1)6d\\n6:6o(-1+-1)7d\\n7:7o(-1+-1)8d\\n8:7o(-1+-1)9d\\n9:5o(-1+2)10d" ], [ "G00023MO", "RES\\n1b:x-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5s:(r)-lactate\\n6b:b-dglc-HEX-1:5\\n7s:n-acetyl\\n8b:b-dglc-HEX-1:5\\n9s:n-acetyl\\n10s:(r)-lactate\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3d(2+1)4n\\n4:3o(3+1)5n\\n5:3o(4+1)6d\\n6:6d(2+1)7n\\n7:6o(4+1)8d\\n8:8d(2+1)9n\\n9:8o(3+1)10n" ], [ "G00024MO", "RES\\n1b:b-dglc-HEX-1:5\\n2b:b-dglc-HEX-1:5\\n3b:b-dglc-HEX-1:5\\nLIN\\n1:1o(3+1)2d\\n2:2o(3+1)3d" ], [ "G00025AJ", "RES\\n1b:o-dglc-HEX-0:0|1:aldi\\n2b:a-lgal-HEX-1:5|6:d\\n3b:b-dgal-HEX-1:5\\nLIN\\n1:1o(3+1)2d\\n2:1o(4+1)3d" ], [ "G00025MO", "RES\\n1b:b-dglc-HEX-1:5\\n2b:b-dglc-HEX-1:5\\n3b:b-dglc-HEX-1:5\\n4b:b-dglc-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(4+1)3d\\n3:3o(4+1)4d" ], [ "G00025YC", "RES\\n1b:x-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dman-HEX-1:5\\n6b:a-dman-HEX-1:5\\n7b:b-dglc-HEX-1:5\\n8s:n-acetyl\\n9b:b-dgal-HEX-1:5\\n10b:a-dman-HEX-1:5\\n11b:b-dglc-HEX-1:5\\n12s:n-acetyl\\n13b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5o(3+1)6d\\n6:6o(2+1)7d\\n7:7d(2+1)8n\\n8:7o(4+1)9d\\n9:5o(6+1)10d\\n10:10o(2+1)11d\\n11:11d(2+1)12n\\n12:1o(6+1)13d\\nUND\\nUND1:100.0:100.0\\nParentIDs:6|10\\nSubtreeLinkageID1:o(4|6+1)d\\nRES\\n14b:b-dglc-HEX-1:5\\n15s:n-acetyl\\n16b:b-dgal-HEX-1:5\\nLIN\\n13:14d(2+1)15n\\n14:14o(4+1)16d" ], [ "G00026MO", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dman-HEX-1:5\\n6b:a-dman-HEX-1:5\\n7b:a-dman-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5o(3+1)6d\\n6:5o(6+1)7d" ], [ "G00027JG", "RES\\n1b:b-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:a-lgal-HEX-1:5|6:d\\n5b:b-dglc-HEX-1:5\\n6s:n-acetyl\\n7b:b-dgal-HEX-1:5\\n8b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3o(2+1)4d\\n4:1o(6+1)5d\\n5:5d(2+1)6n\\n6:5o(4+1)7d\\n7:7o(2+1)8d" ], [ "G00027MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dman-HEX-1:5\\n4b:a-dman-HEX-1:5\\n5b:a-dman-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(3+1)4d\\n4:3o(6+1)5d" ], [ "G00028MO", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dman-HEX-1:5\\n6b:a-dman-HEX-1:5\\n7b:a-dman-HEX-1:5\\n8b:a-dman-HEX-1:5\\n9b:a-dman-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5o(3+1)6d\\n6:5o(6+1)7d\\n7:7o(3+1)8d\\n8:7o(6+1)9d" ], [ "G00029MO", "RES\\n1b:x-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dman-HEX-1:5\\n6b:a-dman-HEX-1:5\\n7b:b-dglc-HEX-1:5\\n8s:n-acetyl\\n9b:a-dman-HEX-1:5\\n10b:a-dman-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5o(3+1)6d\\n6:6o(2|4+1)7d\\n7:7d(2+1)8n\\n8:5o(6+1)9d\\n9:9o(3|6+1)10d" ], [ "G00030MO", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dman-HEX-1:5\\n6b:a-dman-HEX-1:5\\n7b:b-dglc-HEX-1:5\\n8s:n-acetyl\\n9b:a-dman-HEX-1:5\\n10b:b-dglc-HEX-1:5\\n11s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5o(3+1)6d\\n6:6o(2|4+1)7d\\n7:7d(2+1)8n\\n8:5o(6+1)9d\\n9:9o(2|4+1)10d\\n10:10d(2+1)11n" ], [ "G00031MO", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d" ], [ "G00032MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d" ], [ "G00033MO", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:b-dglc-HEX-1:5\\n5s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:1o(6+1)4d\\n4:4d(2+1)5n" ], [ "G00034MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:b-dglc-HEX-1:5\\n5s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:1o(6+1)4d\\n4:4d(2+1)5n" ], [ "G00034WH", "RES\\n1b:x-dglc-HEX-x:x\\n2b:a-dglc-HEX-1:5\\n3b:a-dglc-HEX-1:5\\n4b:a-dglc-HEX-1:5\\n5b:a-dglc-HEX-1:5\\n6b:a-dglc-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(4+1)3d\\n3:3o(6+1)4d\\n4:4o(6+1)5d\\n5:5o(6+1)6d" ], [ "G00035MO", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3d(2+1)4n" ], [ "G00036MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3d(2+1)4n" ], [ "G00037MO", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dglc-HEX-1:5\\n6s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3d(2+1)4n\\n4:1o(6+1)5d\\n5:5d(2+1)6n" ], [ "G00038MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dglc-HEX-1:5\\n6s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3d(2+1)4n\\n4:1o(6+1)5d\\n5:5d(2+1)6n" ], [ "G00039MO", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:a-dgal-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3d(2+1)4n" ], [ "G00040MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:a-dgal-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3d(2+1)4n" ], [ "G00041IL", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:x-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\n6b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n7s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3d(2+1)4n\\n4:3o(3+1)5d\\n5:1o(6+2)6d\\n6:6d(5+1)7n" ], [ "G00041MO", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(6+1)3d\\n3:3d(2+1)4n" ], [ "G00042MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(6+1)3d\\n3:3d(2+1)4n" ], [ "G00043MO", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:a-dgal-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(6+1)3d\\n3:3d(2+1)4n" ], [ "G00044MO", "RES\\n1b:x-dgal-HEX-x:x\\n2s:n-acetyl\\n3b:a-dgal-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(6+1)3d\\n3:3d(2+1)4n" ], [ "G00045MO", "RES\\n1b:x-dglc-HEX-x:x\\n2s:amino\\n3b:a-dman-HEX-1:5\\n4b:a-dman-HEX-1:5\\n5b:a-dman-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(6+1)4d\\n4:4o(2+1)5d" ], [ "G00046MO", "RES\\n1b:x-dgal-HEX-x:x\\n2b:a-dgal-HEX-1:5\\nLIN\\n1:1o(3+1)2d" ], [ "G00047MO", "RES\\n1b:x-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:1o(4+1)4d" ], [ "G00048MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:a-lgal-HEX-1:5|6:d\\n5b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3o(2+1)4d\\n4:1o(4+1)5d" ], [ "G00049MO", "RES\\n1b:b-dglc-HEX-1:5\\n2b:b-dgal-HEX-1:5\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(3+1)3d\\n3:3d(2+1)4n\\n4:3o(3+1)5d" ], [ "G00050MO", "RES\\n1b:b-dglc-HEX-1:5\\n2b:b-dgal-HEX-1:5\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\n6b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1o(4+1)2d\\n2:2o(3+1)3d\\n3:3d(2+1)4n\\n4:3o(3+1)5d\\n5:5o(2+1)6d" ], [ "G00051MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:a-lgal-HEX-1:5|6:d\\n4b:b-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:1o(4+1)4d" ], [ "G00052MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:a-lgal-HEX-1:5|6:d\\n4b:b-dgal-HEX-1:5\\n5b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:1o(4+1)4d\\n4:4o(2+1)5d" ], [ "G00053MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n5s:n-acetyl\\n6b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3o(3+2)4d\\n4:4d(5+1)5n\\n5:1o(4+1)6d" ], [ "G00054MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:a-lgal-HEX-1:5|6:d\\n4b:b-dgal-HEX-1:5\\n5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n6s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:1o(4+1)4d\\n4:4o(3+2)5d\\n5:5d(5+1)6n" ], [ "G00055MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d" ], [ "G00056HH", "RES\\n1b:x-dglc-HEX-1:5\\n2b:x-lgal-HEX-1:5|6:d\\n3s:n-acetyl\\n4b:b-dglc-HEX-1:5\\n5s:n-acetyl\\n6b:b-dman-HEX-1:5\\n7b:a-dman-HEX-1:5\\n8b:b-dglc-HEX-1:5\\n9s:n-acetyl\\n10b:b-dgal-HEX-1:5\\n11b:b-dglc-HEX-1:5\\n12s:n-acetyl\\n13b:b-dgal-HEX-1:5\\n14b:a-dman-HEX-1:5\\n15b:b-dglc-HEX-1:5\\n16s:n-acetyl\\n17b:b-dgal-HEX-1:5\\nLIN\\n1:1o(-1+1)2d\\n2:1d(2+1)3n\\n3:1o(4+1)4d\\n4:4d(2+1)5n\\n5:4o(4+1)6d\\n6:6o(-1+1)7d\\n7:7o(2+1)8d\\n8:8d(2+1)9n\\n9:8o(4+1)10d\\n10:7o(6+1)11d\\n11:11d(2+1)12n\\n12:11o(4+1)13d\\n13:6o(-1+1)14d\\n14:14o(2+1)15d\\n15:15d(2+1)16n\\n16:15o(4+1)17d" ], [ "G00056MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d" ], [ "G00057LF", "RES\\n1b:x-dgal-HEX-x:x\\n2b:x-dgal-HEX-x:x\\n3b:x-dman-HEX-x:x\\n4b:x-dman-HEX-x:x\\n5b:x-dman-HEX-x:x\\n6b:x-dglc-HEX-x:x\\n7s:n-acetyl\\n8b:x-dglc-HEX-x:x\\n9s:n-acetyl\\n10b:x-HEX-x:x\\n11s:n-acetyl\\n12b:x-HEX-x:x\\n13s:n-acetyl\\n14b:x-dgro-dgal-NON-x:x|1:a|2:keto|3:d\\n15s:n-acetyl\\nLIN\\n1:6d(2+1)7n\\n2:8d(2+1)9n\\n3:10d(2+1)11n\\n4:12d(2+1)13n\\n5:14d(5+1)15n" ], [ "G00057MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3d(2+1)4n" ], [ "G00058MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:b-dglc-HEX-1:5\\n5s:n-acetyl\\n6b:b-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(3+1)4d\\n4:4d(2+1)5n\\n5:4o(4+1)6d" ], [ "G00058XR", "RES\\n1b:x-HEX-x:x\\n2b:x-HEX-x:x\\n3b:x-HEX-x:x\\n4s:sulfate\\n5s:n-acetyl\\nLIN\\n1:3o(6+1)4n\\n2:3d(2+1)5n" ], [ "G00059MO", "RES\\n1b:b-dglc-HEX-1:5\\n2b:b-dgal-HEX-1:5\\n3b:a-dgal-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(4+1)3d" ], [ "G00060BT", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:b-dman-HEX-1:5\\n4b:a-dman-HEX-1:5\\n5b:b-dman-HEX-1:5\\n6b:a-dman-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(3+1)4d\\n4:3o(6+1)5d\\n5:5o(3+1)6d" ], [ "G00060MO", "RES\\n1b:b-dglc-HEX-1:5\\n2b:b-dgal-HEX-1:5\\n3b:b-dgal-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\n6b:a-dgal-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(3+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5o(4+1)6d" ], [ "G00061MO", "RES\\n1b:b-dglc-HEX-1:5\\n2b:b-dgal-HEX-1:5\\n3b:a-dgal-HEX-1:5\\n4b:b-dgal-HEX-1:5\\n5s:n-acetyl\\nLIN\\n1:1o(4+1)2d\\n2:2o(4+1)3d\\n3:3o(3+1)4d\\n4:4d(2+1)5n" ], [ "G00062MO", "RES\\n1b:b-dgal-HEX-1:5\\n2b:b-dglc-HEX-1:5\\n3s:n-acetyl\\n4b:b-dgal-HEX-1:5\\n5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n6s:n-acetyl\\n7b:b-dgal-HEX-1:5\\n8s:n-acetyl\\nLIN\\n1:1o(3+1)2d\\n2:2d(2+1)3n\\n3:2o(4+1)4d\\n4:4o(3+2)5d\\n5:5d(5+1)6n\\n6:4o(4+1)7d\\n7:7d(2+1)8n" ], [ "G00063MO", "RES\\n1b:b-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n5s:n-acetyl\\n6b:b-dgal-HEX-1:5\\n7s:n-acetyl\\n8b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n9s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3o(3+2)4d\\n4:4d(5+1)5n\\n5:3o(4+1)6d\\n6:6d(2+1)7n\\n7:1o(6+2)8d\\n8:8d(5+1)9n" ], [ "G00064MO", "RES\\n1b:b-dglc-HEX-1:5\\n2b:b-dgal-HEX-1:5\\n3b:a-dgal-HEX-1:5\\n4b:b-dgal-HEX-1:5\\n5s:n-acetyl\\n6b:a-dglc-HEX-1:5\\n7s:n-acetyl\\nLIN\\n1:1o(4+1)2d\\n2:2o(4+1)3d\\n3:3o(3+1)4d\\n4:4d(2+1)5n\\n5:4o(3+1)6d\\n6:6d(2+1)7n" ], [ "G00065MO", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n5s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(3+2)4d\\n4:4d(5+1)5n" ], [ "G00066MO", "RES\\n1b:b-dgal-HEX-1:5\\n2b:a-lgal-HEX-1:5|6:d\\n3b:a-dgal-HEX-1:5\\n4s:n-acetyl\\nLIN\\n1:1o(2+1)2d\\n2:1o(3+1)3d\\n3:3d(2+1)4n" ], [ "G00066WY", "RES\\n1b:x-dgal-HEX-x:x\\n2b:x-dgal-HEX-x:x\\n3b:x-dglc-HEX-x:x\\n4s:n-acetyl\\n5b:x-dglc-HEX-x:x\\n6s:n-acetyl\\n7b:x-dglc-HEX-x:x\\nLIN\\n1:3d(2+1)4n\\n2:5d(2+1)6n" ], [ "G00067MO", "RES\\n1b:b-dgal-HEX-1:5\\n2b:a-lgal-HEX-1:5|6:d\\n3b:b-dgal-HEX-1:5\\nLIN\\n1:1o(2+1)2d\\n2:1o(3+1)3d" ], [ "G00068MO", "RES\\n1b:b-dgal-HEX-1:5\\n2b:a-lgal-HEX-1:5|6:d\\nLIN\\n1:1o(2+1)2d" ], [ "G00069MO", "RES\\n1b:x-dglc-HEX-x:x\\n2b:b-dgal-HEX-1:5\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(3+1)3d\\n3:3d(2+1)4n\\n4:3o(3+1)5d" ], [ "G00070MO", "RES\\n1b:x-dglc-HEX-x:x\\n2b:b-dgal-HEX-1:5\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(3+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d" ], [ "G00071MO", "RES\\n1b:x-dglc-HEX-x:x\\n2b:b-dgal-HEX-1:5\\n3b:b-dgal-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\nLIN\\n1:1o(4+1)2d\\n2:2o(4+1)3d\\n3:3d(2+1)4n\\n4:3o(3+1)5d" ], [ "G00072MO", "RES\\n1b:x-dglc-HEX-x:x\\n2b:b-dgal-HEX-1:5\\n3b:b-dgal-HEX-1:5\\n4b:b-dgal-HEX-1:5\\n5s:n-acetyl\\nLIN\\n1:1o(4+1)2d\\n2:2o(4+1)3d\\n3:3o(3+1)4d\\n4:4d(2+1)5n" ], [ "G00076PK", "RES\\n1b:b-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:a-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(4+1)4d" ], [ "G00082CQ", "RES\\n1b:x-PEN-x:x\\n2b:x-HEX-x:x\\n3b:x-HEX-x:x\\n4b:x-HEX-x:x|4,5:enx|6:a" ], [ "G00087BY", "RES\\n1b:x-lgal-HEX-x:x|6:d\\n2b:x-dman-HEX-x:x\\n3b:x-dman-HEX-x:x\\n4b:x-dman-HEX-x:x\\n5b:x-dglc-HEX-x:x\\n6s:n-acetyl\\n7b:x-dglc-HEX-x:x\\n8s:n-acetyl\\n9b:x-dglc-HEX-x:x\\n10s:n-acetyl\\n11b:x-dglc-HEX-x:x\\n12s:n-acetyl\\n13b:x-dgal-HEX-x:x\\n14s:n-acetyl\\n15b:x-dgal-HEX-x:x\\n16b:x-dgro-dgal-NON-x:x|1:a|2:keto|3:d\\n17s:n-acetyl\\n18s:sulfate\\nLIN\\n1:5d(2+1)6n\\n2:7d(2+1)8n\\n3:9d(2+1)10n\\n4:11d(2+1)12n\\n5:13d(2+1)14n\\n6:16d(5+1)17n" ], [ "G00089VH", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:a-dman-HEX-1:5\\n4b:b-dman-HEX-1:5\\n5b:b-dglc-HEX-1:5\\n6s:n-acetyl\\n7b:b-dgal-HEX-1:5\\n8b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n9s:n-acetyl\\n10b:b-dman-HEX-1:5\\n11b:b-dglc-HEX-1:5\\n12s:n-acetyl\\n13b:b-dgal-HEX-1:5\\n14b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n15s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(4+1)3d\\n3:3o(3+1)4d\\n4:4o(2+1)5d\\n5:5d(2+1)6n\\n6:5o(4+1)7d\\n7:7o(6+2)8d\\n8:8d(5+1)9n\\n9:3o(6+1)10d\\n10:10o(2+1)11d\\n11:11d(2+1)12n\\n12:11o(4+1)13d\\n13:13o(6+2)14d\\n14:14d(5+1)15n" ], [ "G00090SL", "RES\\n1b:o-dman-HEX-0:0|1:aldi\\n2b:a-dman-HEX-1:5\\nLIN\\n1:1o(6+1)2d" ], [ "G00091RT", "RES\\n1b:a-dman-HEX-1:5\\n2b:a-dman-HEX-1:5\\n3b:a-dman-HEX-1:5\\n4b:a-dman-HEX-1:5\\n5b:a-dman-HEX-1:5\\nLIN\\n1:1o(3+1)2d\\n2:2o(2+1)3d\\n3:1o(6+1)4d\\n4:4o(2+1)5d" ], [ "G00094SE", "RES\\n1b:a-dgal-HEX-1:5\\n2s:n-acetyl\\n3b:b-dgal-HEX-1:5\\n4b:a-lgal-HEX-1:5|6:d\\n5b:a-dgal-HEX-1:5\\n6s:n-acetyl\\n7b:a-dgal-HEX-1:5\\n8b:b-dglc-HEX-1:5\\n9s:n-acetyl\\n10b:b-dglc-HEX-1:5\\n11s:n-acetyl\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3o(2+1)4d\\n4:3o(3+1)5d\\n5:5d(2+1)6n\\n6:5o(3+1)7d\\n7:1o(6+1)8d\\n8:8d(2+1)9n\\n9:8o(3+1)10d\\n10:10d(2+1)11n" ], [ "G00105XF", "RES\\n1b:x-dglc-HEX-1:5\\n2s:n-acetyl\\n3b:x-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:x-dgal-HEX-1:5\\n6b:x-dman-HEX-1:5\\n7b:x-dglc-HEX-1:5\\n8s:n-acetyl\\n9b:x-dgal-HEX-1:5\\n10b:x-dman-HEX-1:5\\n11b:x-dglc-HEX-1:5\\n12s:n-acetyl\\n13b:x-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(-1+1)3d\\n3:3d(2+1)4n\\n4:3o(-1+1)5d\\n5:5o(-1+1)6d\\n6:6o(-1+1)7d\\n7:7d(2+1)8n\\n8:7o(-1+1)9d\\n9:5o(-1+1)10d\\n10:10o(-1+1)11d\\n11:11d(2+1)12n\\n12:11o(-1+1)13d\\nUND\\nUND1:100.0:100.0\\nParentIDs:9|13\\nSubtreeLinkageID1:o(-1+-1)d\\nRES\\n14b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n15s:n-acetyl\\nLIN\\n13:14d(5+1)15n" ], [ "G00106LE", "RES\\n1b:x-dglc-HEX-x:x\\n2s:n-acetyl\\n3b:x-dgal-HEX-1:5\\n4s:sulfate\\n5b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d\\n6s:n-acetyl\\n7b:x-lgal-HEX-1:5|6:d\\nLIN\\n1:1d(2+1)2n\\n2:1o(-1+1)3d\\n3:3o(6+1)4n\\n4:3o(-1+2)5d\\n5:5d(5+1)6n\\n6:1o(-1+1)7d" ], [ "G00112IO", "RES\\n1b:o-dgal-HEX-0:0|1:aldi\\n2s:n-acetyl\\n3b:b-dglc-HEX-1:5\\n4s:n-acetyl\\n5b:b-dgal-HEX-1:5\\n6b:b-dglc-HEX-1:5\\n7s:n-acetyl\\n8b:b-dgal-HEX-1:5\\n9b:a-dgal-HEX-1:5\\n10s:n-acetyl\\n11b:b-dglc-HEX-1:5\\n12s:n-acetyl\\n13b:b-dgal-HEX-1:5\\nLIN\\n1:1d(2+1)2n\\n2:1o(3+1)3d\\n3:3d(2+1)4n\\n4:3o(4+1)5d\\n5:5o(3+1)6d\\n6:6d(2+1)7n\\n7:6o(3+1)8d\\n8:8o(3+1)9d\\n9:9d(2+1)10n\\n10:5o(6+1)11d\\n11:11d(2+1)12n\\n12:11o(4+1)13d" ] ] }, "readme": "Name\n - Glycan Sequences GlycoCT\n\nVersion\n - 1.5.23\n\nCreated on\n - 2019-11-13T16:21:17.865259\n\nModified on\n - 2019-11-14T16:30:45.401957\n\nCreated by\n - Rahi Navelkar [rsn13@gwu.edu], Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu]\n\nAuthors\n - Nathan Edwards [nje5@georgetown.edu]\n\nChecksum\n - \n\nUsability Domain\n - The dataset provides the glycan sequences in GlycoCT format for the associated glycans (GlyTouCan Accession). The listed GlyTouCan Accessions are derived from the GlyTouCan accession master list (https://data.glygen.org/GLYDS000281). Source database: https://glytoucan.org/\n\nDescription Domain\n Keywords\n - Glycan\n - GlyTouCan Accession\n - GlycoCT\n\n Pipeline Steps\n - Step-1: The input file was downloaded from the author and a python script is used to extract the data for the GlyTouCan accessions based on the acession master list. Refer to the usability domain for more information on master list.\n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-species-agnostic-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: glycoct.zip\n URI: https://data.glygen.org/ln2wwwdata/source/glycoct.zip\n Output Subdomain\n Name: glycan_sequences_glycoct.csv\n URI: http://data.glygen.org/ln2wwwdata/reviewed/glycan_sequences_glycoct.csv\n Name: glycan_sequences_glycoct.stat.csv\n URI: http://data.glygen.org/ln2wwwdata/reviewed/glycan_sequences_glycoct.stat.csv\n\nFields\n Name: \"glytoucan_ac\"\n Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n Unique Values: \"29547\"\n Name: \"sequence_glycoct\"\n Description: \"Glycan sequence in a GlycoCT format\"\n Unique Values: \"29537\"", "downloadurl": "/ln2data/releases/data/v-1.5.23/reviewed/glycan_sequences_glycoct.csv" }