{
    "bcoid": "GLY_000436",
    "title": "SARS-CoV2 EBI-UniProtKB NT file",
    "description": "The SARS coronavirus (SARS-CoV-2 or 2019-nCov) EBI-UniProtKB NT file contains proteome data for sarscov2 ...",
    "filename": "sarscov2_protein_ntdata.nt",
    "filetype": "nt",
    "categories": {
        "species": "SARS coronavirus (SARS-CoV-2 or 2019-nCoV)",
        "molecule": "Protein",
        "tags": "EMBL-EBI-GlyGen-NT File",
        "file_type": "nt",
        "status": "Reviewed",
        "scope": "internal"
    },
    "iconfilename": "nt_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre><http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.uniprot.org/core/Protein> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/version> \"1\"^^<http://www.w3.org/2001/XMLSchema#integer> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/created> \"2020-04-22\"^^<http://www.w3.org/2001/XMLSchema#date> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/modified> \"2020-04-22\"^^<http://www.w3.org/2001/XMLSchema#date> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/mnemonic> \"R1AB_WCPV\" .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/reviewed> \"true\"^^<http://www.w3.org/2001/XMLSchema#boolean> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/existence> <http://purl.uniprot.org/core/Evidence_at_Protein_Level_Existence> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/organism> <http://purl.uniprot.org/taxonomy/2697049> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/recommendedName> <http://purl.uniprot.org/uniprot/P0DTD1#SIP8C65ADC5B4362114> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/alternativeName> <http://purl.uniprot.org/uniprot/P0DTD1#SIP89F5D89D502F5897> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/encodedBy> <http://purl.uniprot.org/uniprot/P0DTD1#gene-MD5BF72E109CEC25BEB68530CC6176B33BD> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/sequence> <http://purl.uniprot.org/isoforms/P0DTD1-1> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/2> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1072> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1132> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/255> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1193> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/269> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/347> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1035> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1043> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1095> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1100> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/433> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/489> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1127> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/677> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/688> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/694> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/696> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/788> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/1133> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/833> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/693> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/keywords/863> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0005524> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0004197> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0008234> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0016896> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0008168> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0003676> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0008242> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0003723> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0003968> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0016740> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0008270> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0006508> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0006351> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0019079> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0019082> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://purl.uniprot.org/core/classifiedWith> <http://purl.uniprot.org/uniprot/#_kb.P0DTD1_up.classifiedWith_obo.GO_0039694> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://rdf.wwpdb.org/pdb/6LU7> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/embl-cds/QHD43415.1> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/cdd/cd15239> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/cdd/cd17934> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/cdd/cd18808> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/1.10.150.420> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/1.10.1840.10> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/1.10.8.1190> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/1.10.8.370> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/2.20.25.360> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/2.30.30.590> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/2.40.10.10> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/2.40.10.250> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/2.40.10.290> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.10.20.350> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.10.20.540> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.40.220.10> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.40.220.20> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.40.220.30> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.40.50.11020> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.40.50.11580> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.40.50.150> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.40.50.300> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/gene3d/3.90.70.90> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR027351> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR032505> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR009461> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR027352> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR037227> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR002589> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR032592> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR042570> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR021590> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR036333> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR009466> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR042515> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR038030> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR024375> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR038400> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR022733> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR038166> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR038123> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR014828> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR037204> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR014829> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR037230> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR014822> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR036499> .\n<http://purl.uniprot.org/uniprot/P0DTD1> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://purl.uniprot.org/interpro/IPR027417> .\n</pre>"
    },
    "readme": "Name\n   - SARS-CoV2 EBI-UniProtKB NT file\n\nVersion\n   - 1.5.23\n\nCreated on\n  - 2020-04-03T11:46:41.584409\n\nModified on\n   - 2020-04-10T12:27:51.924026\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The SARS coronavirus (SARS-CoV-2 or 2019-nCov) EBI-UniProtKB NT file contains proteome data for sarscov2 [taxid:2697049] from UniProtKB and other EMBL-EBI resources as per the GlyGen specifications in the NT format The dataset is derived from 2020-01 UniProt release. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - NT\n   - proteome\n   - EMBL-EBI\n\n   Pipeline Steps\n   - Step-0: The NT file requires no processing after it is recieved from EMBL-EBI-UniProtKB\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-sars-cov-2.nt\n      URI: https://data.glygen.org/ln2data/releases/data/v-1.5.23/source/uniprot-proteome-sars-cov-2.nt\n   Output Subdomain\n      Name: sarscov2_protein_ntdata.nt\n      URI: http://data.glygen.org/ln2data/releases/data/v-1.5.23/reviewed/sarscov2_protein_ntdata.nt\n      Name: sarscov2_protein_ntdata.stat.csv\n      URI: http://data.glygen.org/ln2data/releases/data/v-1.5.23/reviewed/sarscov2_protein_ntdata.stat.csv\n\nFields\n      Name: \"triple\"\n     Description: \"RDF triple\"\n      Unique Values: \"3338\"",
    "downloadurl": "/ln2data/releases/data/v-1.5.23/reviewed/sarscov2_protein_ntdata.nt"
}