{ "glytoucan_ac": "G09528DL", "mass": 2036.72, "iupac": "", "wurcs": "WURCS=2.0/4,11,10/[AUd21122h_5*NCC/3=O][uxxxxm][uxxxxh_2*NCC/3=O][uxxxxh]/1-2-3-3-3-4-4-4-4-4-4/a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?", "glycoct": "RES\\n1b:x-dgro-dgal-NON-x:x|1:a|2:keto|3:d\\n2s:n-acetyl\\n3b:x-HEX-x:x\\n4b:x-HEX-x:x\\n5b:x-HEX-x:x\\n6b:x-HEX-x:x\\n7b:x-HEX-x:x\\n8b:x-HEX-x:x\\n9b:x-HEX-x:x|6:d\\n10b:x-HEX-x:x\\n11s:n-acetyl\\n12b:x-HEX-x:x\\n13s:n-acetyl\\n14b:x-HEX-x:x\\n15s:n-acetyl\\nLIN\\n1:1d(5+1)2n\\n2:10d(2+1)11n\\n3:12d(2+1)13n\\n4:14d(2+1)15n", "species": [ { "evidence": [ { "url": "http://www.unicarbkb.org/structure/", "id": "", "database": "UniCarbKB" } ], "taxid": 9606, "name": "Homo sapiens" } ], "classification": [ { "subtype": { "url": "", "name": "Other" }, "type": { "url": "", "name": "Other" } } ], "enzyme": [], "crossref": [ { "url": "http://unicarbkb.org/query", "id": "HexNAc3Hex6dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" }, { "url": "http://unicarbkb.org/query", "id": "comp_HexNAc3Hex6dHex1NeuAc1NeuGc0Pent0S0P0KDN0HexA0", "database": "UniCarbKB" } ], "glycoprotein": [ { "residue": "Asn", "uniprot_canonical_ac": "A8MYU2-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/A8MYU2/annotated", "id": "A8MYU2", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/26791533", "id": "26791533", "database": "PubMed" } ], "protein_name": "Potassium channel subfamily U member 1; Calcium-activated potassium channel, subfamily M subunit alpha-3; Calcium-activated potassium channel subunit alpha-3; Slowpoke homolog 3; KCa5.", "position": 666, "tax_name": "Homo sapiens", "gene_name": "KCNU1; KCNMA3; KCNMC1; SLO3; KCa5; KCa5.1; Kcnma3; Slo3.", "tax_id": 9606 }, { "residue": "Asn", "uniprot_canonical_ac": "P01877-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/P01877/annotated", "id": "P01877", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24766575", "id": "24766575", "database": "PubMed" } ], "protein_name": "Immunoglobulin heavy constant alpha 2; Ig alpha-2 chain C region; Ig alpha-2 chain C region LAN; Ig alpha-2 chain C region BUT.", "position": 47, "tax_name": "Homo sapiens", "gene_name": "IGHA2.", "tax_id": 9606 }, { "residue": "Asn", "uniprot_canonical_ac": "P01871-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/P01871/annotated", "id": "P01871", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24766575", "id": "24766575", "database": "PubMed" } ], "protein_name": "Immunoglobulin heavy constant mu; Ig mu chain C region OU; Ig mu chain C region; Ig mu chain C region GAL; Ig mu chain C region BOT.", "position": 46, "tax_name": "Homo sapiens", "gene_name": "IGHM.", "tax_id": 9606 }, { "residue": "Asn", "uniprot_canonical_ac": "P11279-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/P11279/annotated", "id": "P11279", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/29741879", "id": "29741879", "database": "PubMed" } ], "protein_name": "Lysosome-associated membrane glycoprotein 1; LAMP-1; Lysosome-associated membrane protein 1; CD107 antigen-like family member A.", "position": 249, "tax_name": "Homo sapiens", "gene_name": "LAMP1; CD107a; LAMPA; LGP120.", "tax_id": 9606 }, { "residue": "Asn", "uniprot_canonical_ac": "P15586-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/P15586/annotated", "id": "P15586", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/23345538", "id": "23345538", "database": "PubMed" } ], "protein_name": "N-acetylglucosamine-6-sulfatase; 3.1.6.14; Glucosamine-6-sulfatase; G6S.", "position": 317, "tax_name": "Homo sapiens", "gene_name": "GNS; G6S.", "tax_id": 9606 }, { "residue": "Asn", "uniprot_canonical_ac": "P07288-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/P07288/annotated", "id": "P07288", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/24393138", "id": "24393138", "database": "PubMed" } ], "protein_name": "Prostate-specific antigen; PSA; 3.4.21.77; Gamma-seminoprotein; Seminin; Semenogelase; P-30 antigen; Kallikrein-3.", "position": 69, "tax_name": "Homo sapiens", "gene_name": "KLK3; APS; hK3; KLK2A1; PSA.", "tax_id": 9606 }, { "residue": "Asn", "uniprot_canonical_ac": "Q13087-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/Q13087/annotated", "id": "Q13087", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/29741879", "id": "29741879", "database": "PubMed" } ], "protein_name": "Protein disulfide-isomerase A2; 5.3.4.1; Pancreas-specific protein disulfide isomerase; PDIp.", "position": 516, "tax_name": "Homo sapiens", "gene_name": "PDIA2; PDIP; PDA2; PDI; PDIR.", "tax_id": 9606 }, { "residue": "Asn", "uniprot_canonical_ac": "O14513-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/O14513/annotated", "id": "O14513", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/23345538", "id": "23345538", "database": "PubMed" } ], "protein_name": "Nck-associated protein 5; NAP-5; Peripheral clock protein.", "position": 585, "tax_name": "Homo sapiens", "gene_name": "NCKAP5; ERIH; NAP5; ERIH1; ERIH2.", "tax_id": 9606 }, { "residue": "Asn", "uniprot_canonical_ac": "P11279-1", "evidence": [ { "url": "http://unicarbkb.org/proteinsummary/P11279/annotated", "id": "P11279", "database": "UniCarbKB" }, { "url": "https://www.ncbi.nlm.nih.gov/pubmed/29741879", "id": "29741879", "database": "PubMed" } ], "protein_name": "Lysosome-associated membrane glycoprotein 1; LAMP-1; Lysosome-associated membrane protein 1; CD107 antigen-like family member A.", "position": 261, "tax_name": "Homo sapiens", "gene_name": "LAMP1; CD107a; LAMPA; LGP120.", "tax_id": 9606 } ], "mass_pme": 2541.28, "inchi_key": {}, "publication": [ { "title": "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "url": "https://www.ncbi.nlm.nih.gov/pubmed/29741879", "journal": "Analytical chemistry", "evidence": [ { "url": "http://www.unicarbkb.org/structure/", "id": "", "database": "UniCarbKB" } ], "authors": "Hu Y, Shah P, Clark DJ, Ao M, Zhang H", "date": "2018", "pmid": "29741879" }, { "title": "N-Glycoproteomics of Human Seminal Plasma Glycoproteins.", "url": "https://www.ncbi.nlm.nih.gov/pubmed/26791533", "journal": "Journal of proteome research", "evidence": [ { "url": "http://www.unicarbkb.org/structure/", "id": "", "database": "UniCarbKB" } ], "authors": "Saraswat M, Joenvaara S, Tomar AK, Singh S, Yadav S, Renkonen R", "date": "2016", "pmid": "26791533" }, { "title": "Efficient and accurate glycopeptide identification pipeline for high-throughput site-specific N-glycosylation analysis.", "url": "https://www.ncbi.nlm.nih.gov/pubmed/24766575", "journal": "Journal of proteome research", "evidence": [ { "url": "http://www.unicarbkb.org/structure/", "id": "", "database": "UniCarbKB" } ], "authors": "Liu M, Zhang Y, Chen Y, Yan G, Shen C, Cao J, Zhou X, Liu X, Zhang L, Shen H, Lu H, He F, Yang P", "date": "2014", "pmid": "24766575" }, { "title": "Glycan analysis of Prostate Specific Antigen (PSA) directly from the intact glycoprotein by HR-ESI/TOF-MS.", "url": "https://www.ncbi.nlm.nih.gov/pubmed/24393138", "journal": "Journal of proteome research", "evidence": [ { "url": "http://www.unicarbkb.org/structure/", "id": "", "database": "UniCarbKB" } ], "authors": "Behnken HN, Ruthenbeck A, Schulz JM, Meyer B", "date": "2014", "pmid": "24393138" }, { "title": "Glycoproteomic analysis of the secretome of human endothelial cells.", "url": "https://www.ncbi.nlm.nih.gov/pubmed/23345538", "journal": "Molecular & cellular proteomics : MCP", "evidence": [ { "url": "http://www.unicarbkb.org/structure/", "id": "", "database": "UniCarbKB" } ], "authors": "Yin X, Bern M, Xing Q, Ho J, Viner R, Mayr M", "date": "2013", "pmid": "23345538" } ], "smiles_isomeric": "", "residues": [], "composition": [ { "residue": "other", "count": 0, "name": "Other" }, { "residue": "dhex", "count": 1, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840", "name": "6-Deoxy-Hexose", "cid": "840" }, { "residue": "hexa", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610", "name": "Hexuronic Acid", "cid": "610" }, { "residue": "neugc", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001", "name": "N-Glycolyl-Neuraminic Acid", "cid": "440001" }, { "residue": "hex", "count": 6, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206", "name": "Hexose", "cid": "206" }, { "residue": "hexnac", "count": 3, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899", "name": "N-Acetylhexosamine", "cid": "899" }, { "residue": "hexn", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739", "name": "2-Amino-2-Deoxy-Hexose", "cid": "739" }, { "residue": "p", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061", "name": "Phosphate", "cid": "1061" }, { "residue": "s", "count": 0, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117", "name": "Sulfate", "cid": "1117" }, { "residue": "neuac", "count": 1, "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197", "name": "N-Acetyl-Neuraminic Acid", "cid": "439197" } ], "glycam": "", "number_monosaccharides": 11, "motifs": [], "inchi": "" }