{ "bcoid": "GLY_000235", "title": "Mouse Protein Citations (RefSeq)", "description": "The Mouse Protein Citations (RefSeq) datasets contains mouse [taxid:10090] UniProtKB accessions mapped ...", "filename": "mouse_protein_citations_refseq.csv", "filetype": "csv", "categories": { "species": "Mus musculus", "molecule": "Protein", "tags": "Protein Citations", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "B2RRL2-1...", "17967808..." ], [ "Q9JIP4-1...", "30377218..." ] ], "headers": [ "uniprotkb_ca...", "pmid..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "pmid" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" } ], [ "B2RRL2-1", "17967808", "EUCOMM--the European conditional mouse mutagenesis program.", "Briefings in functional genomics & proteomics", "2007 Sep", "Friedel RH, Seisenberger C, Kaloff C, Wurst W" ], [ "Q9JIP4-1", "30377218", "The weak voltage dependence of pannexin 1 channels can be tuned by N-terminal modifications.", "The Journal of general physiology", "2018 Dec 3", "Michalski K, Henze E, Nguyen P, Lynch P, Kawate T" ], [ "P31266-1", "30958266", "Transitions in cell potency during early mouse development are driven by Notch.", "eLife", "2019 Apr 8", "Menchero S, Rollan I, Lopez-Izquierdo A, Andreu MJ, Sainz de Aja J, Kang M, Adan J, Benedito R, Rayon T, Hadjantonakis AK, Manzanares M" ], [ "Q9QZ11-1", "12629043", "Inactivation of Exonuclease 1 in mice results in DNA mismatch repair defects, increased cancer susceptibility, and male and female sterility.", "Genes & development", "2003 Mar 1", "Wei K, Clark AB, Wong E, Kane MF, Mazur DJ, Parris T, Kolas NK, Russell R, Hou H Jr, Kneitz B, Yang G, Kunkel TA, Kolodner RD, Cohen PE, Edelmann W" ], [ "P63242-1", "24165879", "Evaluation of TRAP-sequencing technology with a versatile conditional mouse model.", "Nucleic acids research", "2014 Jan", "Hupe M, Li MX, Gertow Gillner K, Adams RH, Stenman JM" ], [ "Q8VIG3-1", "18453535", "Meichroacidin containing the membrane occupation and recognition nexus motif is essential for spermatozoa morphogenesis.", "The Journal of biological chemistry", "2008 Jul 4", "Tokuhiro K, Hirose M, Miyagawa Y, Tsujimura A, Irie S, Isotani A, Okabe M, Toyama Y, Ito C, Toshimori K, Takeda K, Oshio S, Tainaka H, Tsuchida J, Okuyama A, Nishimune Y, Tanaka H" ], [ "Q8CEF1-1", "22297488", "Silencing of Fem1cR3 gene expression in the DBA/2J mouse precedes retinal ganglion cell death and is associated with histone deacetylase activity.", "Investigative ophthalmology & visual science", "2012 Mar", "Pelzel HR, Schlamp CL, Waclawski M, Shaw MK, Nickells RW" ], [ "B1AYL1-1", "23070814", "The selector gene Pax7 dictates alternate pituitary cell fates through its pioneer action on chromatin remodeling.", "Genes & development", "2012 Oct 15", "Budry L, Balsalobre A, Gauthier Y, Khetchoumian K, L'honore A, Vallette S, Brue T, Figarella-Branger D, Meij B, Drouin J" ], [ "Q62252-1", "17971504", "Tissue expression patterns identify mouse cilia genes.", "Physiological genomics", "2008 Jan 17", "McClintock TS, Glasser CE, Bose SC, Bergman DA" ], [ "Q6ZQJ5-1", "23604072", "Mammalian DNA2 helicase/nuclease cleaves G-quadruplex DNA and is required for telomere integrity.", "The EMBO journal", "2013 May 15", "Lin W, Sampathi S, Dai H, Liu C, Zhou M, Hu J, Huang Q, Campbell J, Shin-Ya K, Zheng L, Chai W, Shen B" ], [ "Q9CZX0-1", "19185337", "Elongator controls the migration and differentiation of cortical neurons through acetylation of alpha-tubulin.", "Cell", "2009 Feb 6", "Creppe C, Malinouskaya L, Volvert ML, Gillard M, Close P, Malaise O, Laguesse S, Cornez I, Rahmouni S, Ormenese S, Belachew S, Malgrange B, Chapelle JP, Siebenlist U, Moonen G, Chariot A, Nguyen L" ], [ "Q7TNL7-1", "15328023", "Global analysis of genes differentially expressed in branching and non-branching regions of the mouse embryonic lung.", "Developmental biology", "2004 Sep 15", "Lu J, Qian J, Izvolsky KI, Cardoso WV" ], [ "P26883-1", "7505249", "Structural organization of the genes encoding human and murine FK506-binding protein (FKBP) 13 and comparison to FKBP1.", "Gene", "1993 Dec 8", "Hendrickson BA, Zhang W, Craig RJ, Jin YJ, Bierer BE, Burakoff S, DiLella AG" ], [ "P42586-1", "30532139", "Spinocerebellar ataxia type 11-associated alleles of Ttbk2 dominantly interfere with ciliogenesis and cilium stability.", "PLoS genetics", "2018 Dec", "Bowie E, Norris R, Anderson KV, Goetz SC" ], [ "Q9R0Z9-1", "28193997", "Stepwise reprogramming of liver cells to a pancreas progenitor state by the transcriptional regulator Tgif2.", "Nature communications", "2017 Feb 13", "Cerda-Esteban N, Naumann H, Ruzittu S, Mah N, Pongrac IM, Cozzitorto C, Hommel A, Andrade-Navarro MA, Bonifacio E, Spagnoli FM" ], [ "P33174-1", "7929562", "A novel microtubule-based motor protein (KIF4) for organelle transports, whose expression is regulated developmentally.", "The Journal of cell biology", "1994 Oct", "Sekine Y, Okada Y, Noda Y, Kondo S, Aizawa H, Takemura R, Hirokawa N" ], [ "Q9Z0S9-1", "11535589", "Membrane topography and topogenesis of prenylated Rab acceptor (PRA1).", "The Journal of biological chemistry", "2001 Nov 9", "Lin J, Liang Z, Zhang Z, Li G" ], [ "Q60963-1", "26232205", "Lp-PLA2 Antagonizes Left Ventricular Healing After Myocardial Infarction by Impairing the Appearance of Reparative Macrophages.", "Circulation. Heart failure", "2015 Sep", "He S, Chousterman BG, Fenn A, Anzai A, Nairz M, Brandt M, Hilgendorf I, Sun Y, Ye YX, Iwamoto Y, Tricot B, Weissleder R, Macphee C, Libby P, Nahrendorf M, Swirski FK" ], [ "Q91V08-1", "12858173", "Genetically linked C-type lectin-related ligands for the NKRP1 family of natural killer cell receptors.", "Nature immunology", "2003 Aug", "Iizuka K, Naidenko OV, Plougastel BF, Fremont DH, Yokoyama WM" ], [ "P51576-1", "8834001", "Characterization and chromosomal localization of a human P2X receptor from the urinary bladder.", "Receptors & channels", "1995", "Valera S, Talabot F, Evans RJ, Gos A, Antonarakis SE, Morris MA, Buell GN" ], [ "Q64455-1", "29301754", "Maintenance of murine platelet homeostasis by the kinase Csk and phosphatase CD148.", "Blood", "2018 Mar 8", "Mori J, Nagy Z, Di Nunzio G, Smith CW, Geer MJ, Al Ghaithi R, van Geffen JP, Heising S, Boothman L, Tullemans BME, Correia JN, Tee L, Kuijpers MJE, Harrison P, Heemskerk JWM, Jarvis GE, Tarakhovsky A, Weiss A, Mazharian A, Senis YA" ], [ "Q8CFA1-1", "27626380", "High-throughput discovery of novel developmental phenotypes.", "Nature", "2016 Sep 22", "Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bucan M, Murray SA" ], [ "P18419-1", "2484712", "The androgen-dependent mouse seminal vesicle secretory protein IV: characterization and complementary deoxyribonucleic acid cloning.", "Molecular endocrinology (Baltimore, Md.)", "1987 Oct", "Chen YH, Pentecost BT, McLachlan JA, Teng CT" ], [ "Q7TS72-1", "17355905", "The absence of expression of the three isoenzymes of the inositol 1,4,5-trisphosphate 3-kinase does not prevent the formation of inositol pentakisphosphate and hexakisphosphate in mouse embryonic fibroblasts.", "Cellular signalling", "2007 Jul", "Leyman A, Pouillon V, Bostan A, Schurmans S, Erneux C, Pesesse X" ], [ "P55271-1", "28791750", "Histone deacetylase 1 and 2 are essential for murine neural crest proliferation, pharyngeal arch development, and craniofacial morphogenesis.", "Developmental dynamics : an official publication of the American Association of Anatomists", "2017 Dec", "Milstone ZJ, Lawson G, Trivedi CM" ], [ "P09174-1", "27268253", "Aryl Hydrocarbon Receptor-interacting Protein-like 1 Is an Obligate Chaperone of Phosphodiesterase 6 and Is Assisted by the gamma-Subunit of Its Client.", "The Journal of biological chemistry", "2016 Jul 29", "Gopalakrishna KN, Boyd K, Yadav RP, Artemyev NO" ], [ "P97766-1", "27606604", "Conditional Creation and Rescue of Nipbl-Deficiency in Mice Reveals Multiple Determinants of Risk for Congenital Heart Defects.", "PLoS biology", "2016 Sep", "Santos R, Kawauchi S, Jacobs RE, Lopez-Burks ME, Choi H, Wikenheiser J, Hallgrimsson B, Jamniczky HA, Fraser SE, Lander AD, Calof AL" ], [ "Q8VEJ9-1", "17015433", "Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo.", "Genes & development", "2006 Oct 1", "Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P, Eppig JJ, Solter D, Knowles BB" ], [ "O54785-1", "9560157", "Disruption and sequence identification of 2,000 genes in mouse embryonic stem cells.", "Nature", "1998 Apr 9", "Zambrowicz BP, Friedrich GA, Buxton EC, Lilleberg SL, Person C, Sands AT" ], [ "Q61411-1", "29615452", "Glutamate transporter Slc1a3 mediates inter-niche stem cell activation during skin growth.", "The EMBO journal", "2018 May 2", "Reichenbach B, Classon J, Aida T, Tanaka K, Genander M, Goritz C" ], [ "Q8CGV8-1", "11574168", "Promoter characterization of the human and mouse epilysin (MMP-28) genes.", "Gene", "2001 Sep 5", "Illman SA, Keski-Oja J, Lohi J" ], [ "Q62523-1", "12672821", "Abl interactor 1 promotes tyrosine 296 phosphorylation of mammalian enabled (Mena) by c-Abl kinase.", "The Journal of biological chemistry", "2003 Jun 13", "Tani K, Sato S, Sukezane T, Kojima H, Hirose H, Hanafusa H, Shishido T" ], [ "Q9D787-1", "22838834", "The Rift Valley Fever virus protein NSm and putative cellular protein interactions.", "Virology journal", "2012 Jul 28", "Engdahl C, Naslund J, Lindgren L, Ahlm C, Bucht G" ], [ "Q9Z1D9-1", "20412781", "Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.", "Developmental cell", "2010 Apr 20", "Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P" ], [ "Q9QYE0-1", "15606491", "Targeted disruption of the murine Plag1 proto-oncogene causes growth retardation and reduced fertility.", "Development, growth & differentiation", "2004 Oct", "Hensen K, Braem C, Declercq J, Van Dyck F, Dewerchin M, Fiette L, Denef C, Van de Ven WJ" ], [ "P56812-1", "27608954", "Knockout of programmed cell death 5 (PDCD5) gene attenuates neuron injury after middle cerebral artery occlusion in mice.", "Brain research", "2016 Nov 1", "Lu J, Jiang Z, Chen Y, Zhou C, Chen C" ], [ "Q0P5Y3-1", "18424439", "Foxo3 is essential for the regulation of ataxia telangiectasia mutated and oxidative stress-mediated homeostasis of hematopoietic stem cells.", "The Journal of biological chemistry", "2008 Sep 12", "Yalcin S, Zhang X, Luciano JP, Mungamuri SK, Marinkovic D, Vercherat C, Sarkar A, Grisotto M, Taneja R, Ghaffari S" ], [ "Q8C3L1-1", "27680507", "Mutation in SSUH2 Causes Autosomal-Dominant Dentin Dysplasia Type I.", "Human mutation", "2017 Jan", "Xiong F, Ji Z, Liu Y, Zhang Y, Hu L, Yang Q, Qiu Q, Zhao L, Chen D, Tian Z, Shang X, Zhang L, Wei X, Liu C, Yu Q, Zhang M, Cheng J, Xiong J, Li D, Wu X, Yuan H, Zhang W, Xu X" ], [ "Q61884-1", "8032679", "cDNA cloning and functional characterization of a meiosis-specific protein (MNS1) with apparent nuclear association.", "Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology", "1994 Mar", "Furukawa K, Inagaki H, Naruge T, Tabata S, Tomida T, Yamaguchi A, Yoshikuni M, Nagahama Y, Hotta Y" ], [ "Q8QZW2-1", "12546819", "Pet-1 ETS gene plays a critical role in 5-HT neuron development and is required for normal anxiety-like and aggressive behavior.", "Neuron", "2003 Jan 23", "Hendricks TJ, Fyodorov DV, Wegman LJ, Lelutiu NB, Pehek EA, Yamamoto B, Silver J, Weeber EJ, Sweatt JD, Deneris ES" ], [ "B1AQ85-1", "18721477", "Molecular evolution of the keratin associated protein gene family in mammals, role in the evolution of mammalian hair.", "BMC evolutionary biology", "2008 Aug 23", "Wu DD, Irwin DM, Zhang YP" ], [ "P97875-1", "28658621", "Nociceptors Boost the Resolution of Fungal Osteoinflammation via the TRP Channel-CGRP-Jdp2 Axis.", "Cell reports", "2017 Jun 27", "Maruyama K, Takayama Y, Kondo T, Ishibashi KI, Sahoo BR, Kanemaru H, Kumagai Y, Martino MM, Tanaka H, Ohno N, Iwakura Y, Takemura N, Tominaga M, Akira S" ], [ "Q9D304-1", "12705856", "GRAIL: an E3 ubiquitin ligase that inhibits cytokine gene transcription is expressed in anergic CD4+ T cells.", "Immunity", "2003 Apr", "Anandasabapathy N, Ford GS, Bloom D, Holness C, Paragas V, Seroogy C, Skrenta H, Hollenhorst M, Fathman CG, Soares L" ], [ "Q80Y84-1", "14516692", "Characterisation and developmental expression of mouse Plu-1, a homologue of a human nuclear protein (PLU-1) which is specifically up-regulated in breast cancer.", "Mechanisms of development", "2002 Dec", "Madsen B, Spencer-Dene B, Poulsom R, Hall D, Lu PJ, Scott K, Shaw AT, Burchell JM, Freemont P, Taylor-Papadimitriou J" ], [ "Q9Z1R9-1", "6589791", "Chromosomal assignments of genes for trypsin, chymotrypsin B, and elastase in mouse.", "Somatic cell and molecular genetics", "1984 Jul", "Honey NK, Sakaguchi AY, Lalley PA, Quinto C, MacDonald RJ, Craik C, Bell GI, Rutter WJ, Naylor SL" ], [ "O88909-1", "12011098", "Impaired organic anion transport in kidney and choroid plexus of organic anion transporter 3 (Oat3 (Slc22a8)) knockout mice.", "The Journal of biological chemistry", "2002 Jul 26", "Sweet DH, Miller DS, Pritchard JB, Fujiwara Y, Beier DR, Nigam SK" ], [ "Q8VHL0-1", "12133842", "Analysis of double knockout mice lacking aquaporin-1 and urea transporter UT-B. Evidence for UT-B-facilitated water transport in erythrocytes.", "The Journal of biological chemistry", "2002 Sep 27", "Yang B, Verkman AS" ], [ "Q8BJW6-1", "16705175", "Deletion of SERP1/RAMP4, a component of the endoplasmic reticulum (ER) translocation sites, leads to ER stress.", "Molecular and cellular biology", "2006 Jun", "Hori O, Miyazaki M, Tamatani T, Ozawa K, Takano K, Okabe M, Ikawa M, Hartmann E, Mai P, Stern DM, Kitao Y, Ogawa S" ], [ "Q91ZC0-1", "17618277", "Molecular genetic visualization of a rare subset of unmyelinated sensory neurons that may detect gentle touch.", "Nature neuroscience", "2007 Aug", "Liu Q, Vrontou S, Rice FL, Zylka MJ, Dong X, Anderson DJ" ], [ "Q9CPV0-1", "26518474", "TMEM107 Is a Critical Regulator of Ciliary Protein Composition and Is Mutated in Orofaciodigital Syndrome.", "Human mutation", "2016 Feb", "Shylo NA, Christopher KJ, Iglesias A, Daluiski A, Weatherbee SD" ], [ "Q3TYE7-1", "15226823", "Genomic analysis of mouse retinal development.", "PLoS biology", "2004 Sep", "Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL" ], [ "Q8CE23-1", "25677823", "QRFP-43 inhibits lipolysis by preventing ligand-induced complex formation between perilipin A, caveolin-1, the catalytic subunit of protein kinase and hormone-sensitive lipase in 3T3-L1 adipocytes.", "Biochimica et biophysica acta", "2015 May", "Mulumba M, Granata R, Marleau S, Ong H" ], [ "P70697-1", "11134514", "A mouse model of familial porphyria cutanea tarda.", "Proceedings of the National Academy of Sciences of the United States of America", "2001 Jan 2", "Phillips JD, Jackson LK, Bunting M, Franklin MR, Thomas KR, Levy JE, Andrews NC, Kushner JP" ], [ "Q8BLM0-1", "16615998", "Postnatal expression of KLF12 in the inner medullary collecting ducts of kidney and its trans-activation of UT-A1 urea transporter promoter.", "Biochemical and biophysical research communications", "2006 May 26", "Suda S, Rai T, Sohara E, Sasaki S, Uchida S" ], [ "Q2M4I6-1", "16033648", "A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.", "BMC developmental biology", "2005 Jul 20", "McKee AE, Minet E, Stern C, Riahi S, Stiles CD, Silver PA" ], [ "P97445-1", "31337678", "Methodology and theoretical basis of forward genetic screening for sleep/wakefulness in mice.", "Proceedings of the National Academy of Sciences of the United States of America", "2019 Aug 6", "Miyoshi C, Kim SJ, Ezaki T, Ikkyu A, Hotta-Hirashima N, Kanno S, Kakizaki M, Yamada M, Wakana S, Yanagisawa M, Funato H" ], [ "P70428-1", "27650265", "Polyamines release the let-7b-mediated suppression of initiation codon recognition during the protein synthesis of EXT2.", "Scientific reports", "2016 Sep 21", "Imamura M, Higashi K, Yamaguchi K, Asakura K, Furihata T, Terui Y, Satake T, Maegawa J, Yasumura K, Ibuki A, Akase T, Nishimura K, Kashiwagi K, Linhardt RJ, Igarashi K, Toida T" ], [ "P14097-1", "28096401", "Ornithine decarboxylase regulates M1 macrophage activation and mucosal inflammation via histone modifications.", "Proceedings of the National Academy of Sciences of the United States of America", "2017 Jan 31", "Hardbower DM, Asim M, Luis PB, Singh K, Barry DP, Yang C, Steeves MA, Cleveland JL, Schneider C, Piazuelo MB, Gobert AP, Wilson KT" ], [ "P61793-1", "29724718", "The Autotaxin-Lysophosphatidic Acid Axis Promotes Lung Carcinogenesis.", "Cancer research", "2018 Jul 1", "Magkrioti C, Oikonomou N, Kaffe E, Mouratis MA, Xylourgidis N, Barbayianni I, Megadoukas P, Harokopos V, Valavanis C, Chun J, Kosma A, Stathopoulos GT, Bouros E, Bouros D, Syrigos K, Aidinis V" ], [ "Q8VCZ7-1", "22253232", "KR-POK interacts with p53 and represses its ability to activate transcription of p21WAF1/CDKN1A.", "Cancer research", "2012 Mar 1", "Jeon BN, Kim MK, Choi WI, Koh DI, Hong SY, Kim KS, Kim M, Yun CO, Yoon J, Choi KY, Lee KR, Nephew KP, Hur MW" ], [ "Q3V209-1", "15226823", "Genomic analysis of mouse retinal development.", "PLoS biology", "2004 Sep", "Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL" ], [ "F8VQC1-1", "9857079", "The 72-kDa component of signal recognition particle is cleaved during apoptosis.", "The Journal of biological chemistry", "1998 Dec 25", "Utz PJ, Hottelet M, Le TM, Kim SJ, Geiger ME, van Venrooij WJ, Anderson P" ], [ "Q61086-1", "10395542", "Protein kinase C is differentially stimulated by Wnt and Frizzled homologs in a G-protein-dependent manner.", "Current biology : CB", "1999 Jul 1", "Sheldahl LC, Park M, Malbon CC, Moon RT" ], [ "P50153-1", "8094261", "Selectivity in signal transduction determined by gamma subunits of heterotrimeric G proteins.", "Science (New York, N.Y.)", "1993 Feb 5", "Kleuss C, Scherubl H, Hescheler J, Schultz G, Wittig B" ], [ "Q9CQS7-1", "23473982", "Interaction between DMRT1 function and genetic background modulates signaling and pluripotency to control tumor susceptibility in the fetal germ line.", "Developmental biology", "2013 May 1", "Krentz AD, Murphy MW, Zhang T, Sarver AL, Jain S, Griswold MD, Bardwell VJ, Zarkower D" ], [ "Q9D7I0-1", "17889823", "The calcium binding protein ALG-2 binds and stabilizes Scotin, a p53-inducible gene product localized at the endoplasmic reticulum membrane.", "Archives of biochemistry and biophysics", "2007 Nov 1", "Draeby I, Woods YL, la Cour JM, Mollerup J, Bourdon JC, Berchtold MW" ], [ "E9PYF4-1", "15556938", "Identification of FGF10 targets in the embryonic lung epithelium during bud morphogenesis.", "The Journal of biological chemistry", "2005 Feb 11", "Lu J, Izvolsky KI, Qian J, Cardoso WV" ], [ "F8VQM5-1", "8563027", "CCAAT/enhancer binding protein isoforms expression in the colon of neonatal mice.", "Developmental dynamics : an official publication of the American Association of Anatomists", "1995 Sep", "Blais S, Boudreau F, Beaulieu JF, Asselin C" ], [ "Q9WV68-1", "15760467", "Searching QTL by gene expression: analysis of diabesity.", "BMC genetics", "2005 Mar 10", "Brown AC, Olver WI, Donnelly CJ, May ME, Naggert JK, Shaffer DJ, Roopenian DC" ], [ "Q8BLG2-1", "26090649", "The lysophosphatidic acid receptor LPA4 regulates hematopoiesis-supporting activity of bone marrow stromal cells.", "Scientific reports", "2015 Jun 19", "Igarashi H, Akahoshi N, Ohto-Nakanishi T, Yasuda D, Ishii S" ], [ "Q9WV07-1", "17045234", "Human and mouse eLOX3 have distinct substrate specificities: implications for their linkage with lipoxygenases in skin.", "Archives of biochemistry and biophysics", "2006 Nov 15", "Yu Z, Schneider C, Boeglin WE, Brash AR" ], [ "Q9Z2J0-1", "21386911", "Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways.", "PloS one", "2011 Feb 28", "Thiagarajan RD, Georgas KM, Rumballe BA, Lesieur E, Chiu HS, Taylor D, Tang DT, Grimmond SM, Little MH" ], [ "Q924S7-1", "28705898", "Cellular heterogeneity in the ureteric progenitor niche and distinct profiles of branching morphogenesis in organ development.", "Development (Cambridge, England)", "2017 Sep 1", "Rutledge EA, Benazet JD, McMahon AP" ], [ "P57791-1", "12235369", "Zmpste24 deficiency in mice causes spontaneous bone fractures, muscle weakness, and a prelamin A processing defect.", "Proceedings of the National Academy of Sciences of the United States of America", "2002 Oct 1", "Bergo MO, Gavino B, Ross J, Schmidt WK, Hong C, Kendall LV, Mohr A, Meta M, Genant H, Jiang Y, Wisner ER, Van Bruggen N, Carano RA, Michaelis S, Griffey SM, Young SG" ], [ "Q8CGV4-1", "10753524", "Identification of endogenous retinoids, enzymes, binding proteins, and receptors during early postimplantation development in mouse: important role of retinal dehydrogenase type 2 in synthesis of all-trans-retinoic acid.", "Developmental biology", "2000 Apr 15", "Ulven SM, Gundersen TE, Weedon MS, Landaas VO, Sakhi AK, Fromm SH, Geronimo BA, Moskaug JO, Blomhoff R" ], [ "P97315-1", "25391964", "Radial glia require PDGFD-PDGFRbeta signalling in human but not mouse neocortex.", "Nature", "2014 Nov 13", "Lui JH, Nowakowski TJ, Pollen AA, Javaherian A, Kriegstein AR, Oldham MC" ], [ "Q8C6G0-1", "29730295", "Ifi27 is indispensable for mitochondrial function and browning in adipocytes.", "Biochemical and biophysical research communications", "2018 Jun 18", "Jin W, Jin W, Pan D" ], [ "Q80ZQ5-1", "26238476", "Spatiotemporal regulation of GLI target genes in the mammalian limb bud.", "Developmental biology", "2015 Oct 1", "Lewandowski JP, Du F, Zhang S, Powell MB, Falkenstein KN, Ji H, Vokes SA" ], [ "Q8BGQ7-1", "19690063", "Atf4 regulates obesity, glucose homeostasis, and energy expenditure.", "Diabetes", "2009 Nov", "Seo J, Fortuno ES 3rd, Suh JM, Stenesen D, Tang W, Parks EJ, Adams CM, Townes T, Graff JM" ], [ "Q9CYH6-1", "24029230", "Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7.", "Cancer cell", "2013 Sep 9", "Nagamachi A, Matsui H, Asou H, Ozaki Y, Aki D, Kanai A, Takubo K, Suda T, Nakamura T, Wolff L, Honda H, Inaba T" ], [ "Q8BGM5-1", "18385076", "Bestrophin-2 is involved in the generation of intraocular pressure.", "Investigative ophthalmology & visual science", "2008 Apr", "Bakall B, McLaughlin P, Stanton JB, Zhang Y, Hartzell HC, Marmorstein LY, Marmorstein AD" ], [ "P35347-1", "29844474", "NPTX2 is a key component in the regulation of anxiety.", "Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology", "2018 Aug", "Chang S, Bok P, Tsai CY, Sun CP, Liu H, Deussing JM, Huang GJ" ], [ "Q9JLC3-1", "20634897", "Diversity of protein and mRNA forms of mammalian methionine sulfoxide reductase B1 due to intronization and protein processing.", "PloS one", "2010 Jul 9", "Liang X, Fomenko DE, Hua D, Kaya A, Gladyshev VN" ], [ "O88746-1", "14563850", "Tom1, a VHS domain-containing protein, interacts with tollip, ubiquitin, and clathrin.", "The Journal of biological chemistry", "2003 Dec 26", "Yamakami M, Yoshimori T, Yokosawa H" ] ] }, "readme": "Name\n - Mouse Protein Citations (RefSeq)\n\nVersion\n - 1.5.18\n\nCreated on\n - 2019-09-06T14:06:38.962804\n\nModified on\n - 2020-04-10T12:45:40.582715\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nUsability Domain\n - The Mouse Protein Citations (RefSeq) datasets contains mouse [taxid:10090] UniProtKB accessions mapped to publication information (pmid, title, journal name, publication, date, authors of corresponding RefSeq accessions. The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen\n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - RefSeq\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the NCBI RefSeq gpff files to extract the publication information. The script also maps RefSeq accesion to the UniProtKB Canonical accessions\n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: refseq_protein_all_10090.gpff\n URI: https://data.glygen.org/ln2wwwdata/source/refseq_protein_all_10090.gpff\n Name: mouse_protein_xref_refseq.csv\n URI: https://data.glygen.org/ln2wwwdata/reviewed/mouse_protein_xref_refseq.csv\n Output Subdomain\n Name: mouse_protein_citations_refseq.csv\n URI: http://data.glygen.org/ln2wwwdata/reviewed/mouse_protein_citations_refseq.csv\n Name: mouse_protein_citations_refseq.stat.csv\n URI: http://data.glygen.org/ln2wwwdata/reviewed/mouse_protein_citations_refseq.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"Accession assigned to the protein isoform chosen to be the canonical sequence to which all positional annotation refers in UniProtKB database\"\n Unique Values: \"16248\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"45654\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"1528\"\n Name: \"authors\"\n Description: \"Authors of the associated publications\"\n Unique Values: \"45412\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"6800\"\n Name: \"pmid\"\n Description: \"NCBI PubMed database Identifier\"\n Unique Values: \"45656\"", "downloadurl": "/ln2data/releases/data/v-1.5.18/reviewed/mouse_protein_citations_refseq.csv" }