{ "bcoid": "GLY_000251", "title": "Rat Proteoform Citations (UniCarbKB)", "description": "The Rat Proteoform Citations (UniCarbKB) contains rat [taxid:10116] publication information of glycoproteins ...", "filename": "rat_proteoform_citations_unicarbkb.csv", "filetype": "csv", "categories": { "species": "Rattus norvegicus", "molecule": "Proteoform", "tags": "Protein Citations", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "B2GV54-1...", "24090084..." ], [ "Q9EQV6-1...", "24090084..." ] ], "headers": [ "uniprotkb_ca...", "pmid..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "pmid" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" } ], [ "B2GV54-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q9EQV6-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q63604-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q9JJW1-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P26453-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q99ML5-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "D3ZQP6-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q05695-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P13638-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P97829-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P31422-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P35439-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P97686-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "F1LNP8-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q794F9-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P19493-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P97710-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q8CGU6-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q9Z1Y3-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P97546-2", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q64663-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q62765-1", "14769026", "Structural characterization of recombinant soluble rat neuroligin 1: mapping of secondary structure and glycosylation by mass spectrometry.", "Biochemistry", "2004 Feb 17", "Hoffman RC, Jennings LL, Tsigelny I, Comoletti D, Flynn RE, Sudhof TC, Taylor P" ], [ "P20762-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q9EPB1-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q62718-1", "18729387", "Glycosylation analysis of IgLON family proteins in rat brain by liquid chromatography and multiple-stage mass spectrometry.", "Biochemistry", "2008 Sep 23", "Itoh S, Hachisuka A, Kawasaki N, Hashii N, Teshima R, Hayakawa T, Kawanishi T, Yamaguchi T" ], [ "Q5NDF0-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q66H06-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q63345-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q9JK00-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "A2VD12-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q6Q3F5-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "F1MAA7-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "O35764-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q32KJ5-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P46101-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q00960-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q8R4A1-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q99J86-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P15087-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P01830-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P15127-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P23576-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P47820-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "F1MAN8-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q80Z70-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "D3ZE55-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P70627-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q62867-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q63198-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q5EB76-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P15800-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q1WIM2-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q00959-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P19492-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "D4A435-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "D3ZES7-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "D4A416-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q62813-1", "18729387", "Glycosylation analysis of IgLON family proteins in rat brain by liquid chromatography and multiple-stage mass spectrometry.", "Biochemistry", "2008 Sep 23", "Itoh S, Hachisuka A, Kawasaki N, Hashii N, Teshima R, Hayakawa T, Kawanishi T, Yamaguchi T" ], [ "Q63617-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "G3V928-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P07340-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q68FQ2-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P31596-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q9Z0J8-1", "18729387", "Glycosylation analysis of IgLON family proteins in rat brain by liquid chromatography and multiple-stage mass spectrometry.", "Biochemistry", "2008 Sep 23", "Itoh S, Hachisuka A, Kawasaki N, Hashii N, Teshima R, Hayakawa T, Kawanishi T, Yamaguchi T" ], [ "D3ZUL3-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "B5DFC9-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q765A7-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q6AY20-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P28841-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q9QZA6-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "D4A7M0-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P27615-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "B4F795-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q66HD0-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q9QYP2-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "O70352-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P24268-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "D3ZQ57-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "B0BND0-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q64244-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q03626-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "O88871-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "Q99MZ4-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ], [ "P47971-1", "24090084", "Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity.", "Journal of proteome research", "2013 Dec 6", "Parker BL, Thaysen-Andersen M, Solis N, Scott NE, Larsen MR, Graham ME, Packer NH, Cordwell SJ" ] ] }, "readme": "Name\n - Rat Proteoform Citations (UniCarbKB)\n\nVersion\n - 1.5.18\n\nCreated on\n - 2019-09-06T14:06:38.978102\n\nModified on\n - 2020-04-10T12:00:35.900590\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nUsability Domain\n - The Rat Proteoform Citations (UniCarbKB) contains rat [taxid:10116] publication information of glycoproteins from UniCarbKB. The script accesses the NCBI ENTREZ infrastructure to retrieve the publication information of the given PMID from UniCarbKB. The dataset is contributed by UniCarbKB and processed by GlyGen. If you use this dataset please provide proper attribution to UniCarbKB and GlyGen [UniCarbKB - https://academic.oup.com/nar/article/42/D1/D215/1052197 ,https://doi.org/10.1093/nar/gkt1128]\n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - UniCarbKB\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the input file for PMIDs and accesses the NCBI Entrez infrastructure to download the publication information of the corresponding PMIDs\n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-proteoform-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: rat_proteoform_glycosylation_sites_unicarbkb.csv\n URI: https://data.glygen.org/ln2data/releases/data/v-1.5.18/reviewed/rat_proteoform_glycosylation_sites_unicarbkb.csv\n Output Subdomain\n Name: rat_proteoform_citations_unicarbkb.csv\n URI: http://data.glygen.org/ln2data/releases/data/v-1.5.18/reviewed/rat_proteoform_citations_unicarbkb.csv\n Name: rat_proteoform_citations_unicarbkb.stat.csv\n URI: http://data.glygen.org/ln2data/releases/data/v-1.5.18/reviewed/rat_proteoform_citations_unicarbkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"Accession assigned to the protein isoform chosen to be the canonical sequence to which all positional annotation refers in UniProtKB database\"\n Unique Values: \"142\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"6\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"4\"\n Name: \"authors\"\n Description: \"Authors of the associated publications\"\n Unique Values: \"6\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"6\"\n Name: \"pmid\"\n Description: \"NCBI PubMed database Identifier\"\n Unique Values: \"6\"", "downloadurl": "/ln2data/releases/data/v-1.5.18/reviewed/rat_proteoform_citations_unicarbkb.csv" }