{ "bcoid": "GLY_000264", "title": "Rat Protein Citations (RefSeq)", "description": "The Rat Protein Citations (RefSeq) datasets contains rat [taxid:10116] UniProtKB accessions mapped to ...", "filename": "rat_protein_citations_refseq.csv", "filetype": "csv", "categories": { "species": "Rattus Norvegicus", "molecule": "Protein", "tags": "Protein Citations", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "Q63366-1...", "12141453..." ], [ "Q62921-1...", "15833741..." ] ], "headers": [ "uniprotkb_ca...", "pmid..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "pmid" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" } ], [ "Q63366-1", "12141453", "Expression of neurexin ligands, the neuroligins and the neurexophilins, in the developing and adult rodent olfactory bulb.", "The International journal of developmental biology", "2002", "Clarris HJ, McKeown S, Key B" ], [ "Q62921-1", "15833741", "Nuclear-cytoplasmic shuttling of a RING-IBR protein RBCK1 and its functional interaction with nuclear body proteins.", "The Journal of biological chemistry", "2005 Jun 17", "Tatematsu K, Yoshimoto N, Koyanagi T, Tokunaga C, Tachibana T, Yoneda Y, Yoshida M, Okajima T, Tanizawa K, Kuroda S" ], [ "Q62868-1", "29791873", "RhoA/ROCK signaling regulates smooth muscle phenotypic modulation and vascular remodeling via the JNK pathway and vimentin cytoskeleton.", "Pharmacological research", "2018 Jul", "Tang L, Dai F, Liu Y, Yu X, Huang C, Wang Y, Yao W" ], [ "Q62868-1", "29219181", "Exercise increases Rho-kinase activity and insulin signaling in skeletal muscle.", "Journal of cellular physiology", "2018 Jun", "Munoz VR, Gaspar RC, Kuga GK, da Rocha AL, Crisol BM, Botezelli JD, Baptista IL, Mekary RA, da Silva ASR, Cintra DE, de Moura LP, Ropelle ER, Pauli JR" ], [ "P01257-1", "29846865", "CGRP gene-modified rBMSCs show better osteogenic differentiation capacity in vitro.", "Journal of molecular histology", "2018 Aug", "Yu X, Liu S, Chen H, Zhao X, Chen X, Du Y, Li S" ], [ "P01257-1", "29730242", "Potentiation of capsaicin-induced neurogenic inflammation by 5-HT7 receptors in the rat hind paw: Involvement of calcitonin gen-related peptide.", "Peptides", "2018 Jul", "Arreola-Peralta LD, Altamirano-Reyna F, Galindo-Gonzalez DM, Solis-Anguiano JG, Lacivita E, Leopoldo M, Terron JA" ], [ "P01257-1", "28599085", "Exploring the putative role of TRPV1 -dependent CGRP release in remote hind preconditioning-induced cardioprotection.", "Cardiovascular therapeutics", "2017 Oct", "Randhawa PK, Jaggi AS" ], [ "P01257-1", "28560441", "CGRP attenuates hyperoxia-induced oxidative stress-related injury to alveolar epithelial type II cells via the activation of the Sonic hedgehog pathway.", "International journal of molecular medicine", "2017 Jul", "Dang HX, Li J, Liu C, Fu Y, Zhou F, Tang L, Li L, Xu F" ], [ "Q91XV6-1", "17676640", "Dynamic expression of FXYD6 in the inner ear suggests a role of the protein in endolymph homeostasis and neuronal activity.", "Developmental dynamics : an official publication of the American Association of Anatomists", "2007 Sep", "Delprat B, Puel JL, Geering K" ], [ "Q91XV6-1", "15193427", "Phosphohippolin expression in the rat central nervous system.", "Brain research. Molecular brain research", "2004 Jun 18", "Kadowaki K, Sugimoto K, Yamaguchi F, Song T, Watanabe Y, Singh K, Tokuda M" ], [ "Q7TT49-1", "18854160", "A tripartite complex containing MRCK modulates lamellar actomyosin retrograde flow.", "Cell", "2008 Oct 3", "Tan I, Yong J, Dong JM, Lim L, Leung T" ], [ "D3ZCS4-1", "17244649", "IQGAP3, a novel effector of Rac1 and Cdc42, regulates neurite outgrowth.", "Journal of cell science", "2007 Feb 15", "Wang S, Watanabe T, Noritake J, Fukata M, Yoshimura T, Itoh N, Harada T, Nakagawa M, Matsuura Y, Arimura N, Kaibuchi K" ], [ "Q8R426-1", "25917026", "Neuroprotective or neurotoxic effects of 4-aminopyridine mediated by KChIP1 regulation through adjustment of Kv 4.3 potassium channels expression and GABA-mediated transmission in primary hippocampal cells.", "Toxicology", "2015 Jul 3", "Del Pino J, Frejo MT, Baselga MJ, Capo MA, Moyano P, Garcia JM, Diaz MJ" ], [ "Q8R426-1", "24037673", "Distribution and functional expression of Kv4 family alpha subunits and associated KChIP beta subunits in the bed nucleus of the stria terminalis.", "The Journal of comparative neurology", "2014 Feb 15", "Rainnie DG, Hazra R, Dabrowska J, Guo JD, Li CC, Dewitt S, Muly EC" ], [ "Q8R426-1", "20849929", "Expression and distribution of Kv4 potassium channel subunits and potassium channel interacting proteins in subpopulations of interneurons in the basolateral amygdala.", "Neuroscience", "2010 Dec 15", "Dabrowska J, Rainnie DG" ], [ "Q8R426-1", "19896980", "Gene expression profiling in brain regions of a rat model displaying schizophrenia-related features.", "Behavioural brain research", "2010 Mar 5", "Van Schijndel JE, Van Zweeden M, Van Loo KM, Martens GJ" ], [ "Q8R426-1", "12646414", "Functional properties of a brain-specific NH2-terminally spliced modulator of Kv4 channels.", "American journal of physiology. Cell physiology", "2003 Jul", "Boland LM, Jiang M, Lee SY, Fahrenkrug SC, Harnett MT, O'Grady SM" ], [ "Q8R426-1", "12138168", "Interaction between fast and ultra-slow inactivation in the voltage-gated sodium channel. Does the inactivation gate stabilize the channel structure?", "The Journal of biological chemistry", "2002 Oct 4", "Hilber K, Sandtner W, Kudlacek O, Schreiner B, Glaaser I, Schutz W, Fozzard HA, Dudley SC, Todt H" ], [ "Q62747-1", "28111077", "Synaptotagmin-1- and Synaptotagmin-7-Dependent Fusion Mechanisms Target Synaptic Vesicles to Kinetically Distinct Endocytic Pathways.", "Neuron", "2017 Feb 8", "Li YC, Chanaday NL, Xu W, Kavalali ET" ], [ "Q62747-1", "27771350", "Synaptotagmin 7 and SYNCRIP proteins are ubiquitously expressed in the rat brain and co-localize in Purkinje neurons.", "Journal of chemical neuroanatomy", "2017 Jan", "Tratnjek L, Zivin M, Glavan G" ], [ "Q5XIF5-1", "21914808", "Dihydroceramide-based response to hypoxia.", "The Journal of biological chemistry", "2011 Nov 4", "Devlin CM, Lahm T, Hubbard WC, Van Demark M, Wang KC, Wu X, Bielawska A, Obeid LM, Ivan M, Petrache I" ], [ "Q80ZD7-1", "22056818", "AMIGO is an auxiliary subunit of the Kv2.1 potassium channel.", "EMBO reports", "2011 Dec 1", "Peltola MA, Kuja-Panula J, Lauri SE, Taira T, Rauvala H" ], [ "Q63673-1", "28560441", "CGRP attenuates hyperoxia-induced oxidative stress-related injury to alveolar epithelial type II cells via the activation of the Sonic hedgehog pathway.", "International journal of molecular medicine", "2017 Jul", "Dang HX, Li J, Liu C, Fu Y, Zhou F, Tang L, Li L, Xu F" ], [ "G3V783-1", "26138652", "Nod2-Rip2 Signaling Contributes to Intestinal Injury Induced by Muramyl Dipeptide Via Oligopeptide Transporter in Rats.", "Digestive diseases and sciences", "2015 Nov", "Ma G, Shi B, Liu J, Zhang H, YinTao Z, Lou X, Liang D, Hou Y, Wan S, Yang W" ], [ "Q00969-1", "29921170", "ATF2, but not ATF3, participates in the maintenance of nerve injury-induced tactile allodynia and thermal hyperalgesia.", "Molecular pain", "2018 Jan-Dec", "Salinas-Abarca AB, Velazquez-Lagunas I, Franco-Enzastiga U, Torres-Lopez JE, Rocha-Gonzalez HI, Granados-Soto V" ], [ "Q00969-1", "26781764", "A Low-Protein, High-Carbohydrate Diet Stimulates Thermogenesis in the Brown Adipose Tissue of Rats via ATF-2.", "Lipids", "2016 Mar", "de Franca SA, dos Santos MP, Przygodda F, Garofalo MA, Kettelhut IC, Magalhaes DA, Bezerra KS, Colodel EM, Flouris AD, Andrade CM, Kawashita NH" ], [ "Q00969-1", "26601778", "Counter-regulation of the AP-1 monomers pATF2 and Fos: Molecular readjustment of brainstem neurons in hearing and deaf adult rats after electrical intracochlear stimulation.", "Neuroscience", "2016 Jan 28", "Rauch AK, Rosskothen-Kuhl N, Illing RB" ], [ "P14844-1", "29637744", "The group VIA calcium-independent phospholipase A2 and NFATc4 pathway mediates IL-1beta-induced expression of chemokines CCL2 and CXCL10 in rat fibroblasts.", "The FEBS journal", "2018 Jun", "Kuwata H, Yuzurihara C, Kinoshita N, Taki Y, Ikegami Y, Washio S, Hirakawa Y, Yoda E, Aiuchi T, Itabe H, Nakatani Y, Hara S" ], [ "O88751-1", "11865310", "Differential modulation of Ca(v)2.1 channels by calmodulin and Ca2+-binding protein 1.", "Nature neuroscience", "2002 Mar", "Lee A, Westenbroek RE, Haeseleer F, Palczewski K, Scheuer T, Catterall WA" ], [ "P26342-1", "30598510", "TGF-beta2 uses the concave surface of its extended finger region to bind betaglycan's ZP domain via three residues specific to TGF-beta and inhibin-alpha.", "The Journal of biological chemistry", "2019 Mar 1", "Henen MA, Mahlawat P, Zwieb C, Kodali RB, Hinck CS, Hanna RD, Krzysiak TC, Ilangovan U, Cano KE, Hinck G, Vonberg M, McCabe M, Hinck AP" ], [ "Q4KM34-1", "18508765", "Characterization of a novel cardiac isoform of the cell cycle-related kinase that is regulated during heart failure.", "The Journal of biological chemistry", "2008 Aug 8", "Qiu H, Dai H, Jain K, Shah R, Hong C, Pain J, Tian B, Vatner DE, Vatner SF, Depre C" ], [ "Q68FT9-1", "20164179", "Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.", "The Journal of biological chemistry", "2010 Apr 16", "Omi R, Kurokawa S, Mihara H, Hayashi H, Goto M, Miyahara I, Kurihara T, Hirotsu K, Esaki N" ], [ "Q8R5H8-1", "28383554", "SRT1720 promotes survival of aged human mesenchymal stem cells via FAIM: a pharmacological strategy to improve stem cell-based therapy for rat myocardial infarction.", "Cell death & disease", "2017 Apr 6", "Liu X, Hu D, Zeng Z, Zhu W, Zhang N, Yu H, Chen H, Wang K, Wang Y, Wang L, Zhao J, Zhang L, Wu R, Hu X, Wang J" ], [ "Q6RFY2-1", "21487013", "Scapinin-induced inhibition of axon elongation is attenuated by phosphorylation and translocation to the cytoplasm.", "The Journal of biological chemistry", "2011 Jun 3", "Farghaian H, Chen Y, Fu AW, Fu AK, Ip JP, Ip NY, Turnley AM, Cole AR" ], [ "Q673L6-1", "29436610", "Decreased expression of TERT correlated with postnatal cochlear development and proliferation reduction of cochlear progenitor cells.", "Molecular medicine reports", "2018 Apr", "Song YL, Tian KY, Mi WJ, Ding ZJ, Qiu Y, Chen FQ, Zha DJ, Qiu JH" ], [ "Q673L6-1", "29017189", "Curcumin Affects Adipose Tissue-Derived Mesenchymal Stem Cell Aging Through TERT Gene Expression.", "Drug research", "2018 Apr", "Pirmoradi S, Fathi E, Farahzadi R, Pilehvar-Soltanahmadi Y, Zarghami N" ], [ "O35820-1", "20962348", "Probing the active site of the deoxynucleotide N-hydrolase Rcl encoded by the rat gene c6orf108.", "The Journal of biological chemistry", "2010 Dec 31", "Dupouy C, Zhang C, Padilla A, Pochet S, Kaminski PA" ], [ "O35820-1", "17234634", "The c-Myc target gene Rcl (C6orf108) encodes a novel enzyme, deoxynucleoside 5'-monophosphate N-glycosidase.", "The Journal of biological chemistry", "2007 Mar 16", "Ghiorghi YK, Zeller KI, Dang CV, Kaminski PA" ], [ "Q9QXY2-1", "30315850", "MiR-150 promotes angiogensis and proliferation of endothelial progenitor cells in deep venous thrombosis by targeting SRCIN1.", "Microvascular research", "2019 May", "Wang W, Zhu X, Du X, Xu A, Yuan X, Zhan Y, Liu M, Wang S" ], [ "Q9QXY2-1", "28641114", "A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and Functional Synapses in the Neocortex.", "Neuron", "2017 Jun 21", "Li MY, Miao WY, Wu QZ, He SJ, Yan G, Yang Y, Liu JJ, Taketo MM, Yu X" ], [ "Q9QXY2-1", "24453341", "p140Cap regulates memory and synaptic plasticity through Src-mediated and citron-N-mediated actin reorganization.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2014 Jan 22", "Repetto D, Camera P, Melani R, Morello N, Russo I, Calcagno E, Tomasoni R, Bianchi F, Berto G, Giustetto M, Berardi N, Pizzorusso T, Matteoli M, Di Stefano P, Missler M, Turco E, Di Cunto F, Defilippi P" ], [ "Q9QXY2-1", "23325552", "Localization of multidomain adaptor proteins, p140Cap and vinexin, in the pancreatic islet of a spontaneous diabetes mellitus model, Otsuka Long-Evans Tokushima Fatty rats.", "Medical molecular morphology", "2013 Mar", "Yamauchi M, Sudo K, Ito H, Iwamoto I, Morishita R, Murai T, Kajita K, Ishizuka T, Nagata K" ], [ "Q9QXY2-1", "21725361", "p140Cap suppresses the invasive properties of highly metastatic MTLn3-EGFR cells via impaired cortactin phosphorylation.", "Oncogene", "2012 Feb 2", "Damiano L, Le Devedec SE, Di Stefano P, Repetto D, Lalai R, Truong H, Xiong JL, Danen EH, Yan K, Verbeek FJ, De Luca E, Attanasio F, Buccione R, Turco E, van de Water B, Defilippi P" ], [ "Q63767-1", "20623582", "p130Cas, Crk-associated substrate plays essential roles in liver development by regulating sinusoidal endothelial cell fenestration.", "Hepatology (Baltimore, Md.)", "2010 Sep", "Tazaki T, Sasaki T, Uto K, Yamasaki N, Tashiro S, Sakai R, Tanaka M, Oda H, Honda Z, Honda H" ], [ "Q63767-1", "17617061", "Basic helix-loop-helix protein E47-mediated p21Waf1/Cip1 gene expression regulates apoptosis of intestinal epithelial cells.", "The Biochemical journal", "2007 Oct 15", "Bhattacharya S, Guo H, Ray RM, Johnson LR" ], [ "Q63767-1", "17615370", "Abl silencing inhibits CAS-mediated process and constriction in resistance arteries.", "Circulation research", "2007 Aug 17", "Anfinogenova Y, Wang R, Li QF, Spinelli AM, Tang DD" ], [ "B5DEZ6-1", "21779089", "Expression of new loci associated with obesity in diet-induced obese rats: from genetics to physiology.", "Obesity (Silver Spring, Md.)", "2012 Feb", "Gutierrez-Aguilar R, Kim DH, Woods SC, Seeley RJ" ], [ "Q6X936-1", "12865409", "Neph1 and nephrin interaction in the slit diaphragm is an important determinant of glomerular permeability.", "The Journal of clinical investigation", "2003 Jul", "Liu G, Kaw B, Kurfis J, Rahmanuddin S, Kanwar YS, Chugh SS" ], [ "Q3SWS9-1", "14718537", "Marlin-1, a novel RNA-binding protein associates with GABA receptors.", "The Journal of biological chemistry", "2004 Apr 2", "Couve A, Restituito S, Brandon JM, Charles KJ, Bawagan H, Freeman KB, Pangalos MN, Calver AR, Moss SJ" ], [ "P63057-1", "16115881", "The Optimedin gene is a downstream target of Pax6.", "The Journal of biological chemistry", "2005 Oct 21", "Grinchuk O, Kozmik Z, Wu X, Tomarev S" ], [ "P30937-1", "25926390", "Somatostatin receptor 1-5; expression profiles during rat development.", "Upsala journal of medical sciences", "2015", "Ludvigsen E, Carlsson C, Tiensuu Janson E, Sandler S, Stridsberg M" ], [ "P68101-1", "29289717", "Exploring the Interaction Between eIF2alpha Dysregulation, Acute Endoplasmic Reticulum Stress and DYT1 Dystonia in the Mammalian Brain.", "Neuroscience", "2018 Feb 10", "Beauvais G, Rodriguez-Losada N, Ying L, Zakirova Z, Watson JL, Readhead B, Gadue P, French DL, Ehrlich ME, Gonzalez-Alegre P" ], [ "P12371-1", "29029788", "Differential Ca(2+) mobilization and mast cell degranulation by FcepsilonRI- and GPCR-mediated signaling.", "Cell calcium", "2017 Nov", "Chen YC, Chang YC, Chang HA, Lin YS, Tsao CW, Shen MR, Chiu WT" ], [ "P12371-1", "25289695", "Regulation of the tyrosine phosphorylation of Phospholipid Scramblase 1 in mast cells that are stimulated through the high-affinity IgE receptor.", "PloS one", "2014", "Kassas A, Moura IC, Yamashita Y, Scheffel J, Guerin-Marchand C, Blank U, Sims PJ, Wiedmer T, Monteiro RC, Rivera J, Charles N, Benhamou M" ], [ "P12371-1", "24791697", "Protein tyrosine phosphatase-PEST (PTP-PEST) regulates mast cell-activating signals in PTP activity-dependent and -independent manners.", "Cellular immunology", "2014 May-Jun", "Motohashi S, Koizumi K, Honda R, Maruyama A, Palmer HE, Mashima K" ], [ "P12371-1", "24497038", "Dual regulation of mast cell degranulation through IgE receptor-mediated modulation of M(2)-type pyruvate kinase.", "Archives of pharmacal research", "2014", "Zheng M, Cho DI, Le HT, Cheon SH, Kim KM" ], [ "P12371-1", "22820943", "An involvement of neurokinin-1 receptor in FcepsilonRIota-mediated RBL-2H3 mast cell activation.", "Inflammation research : official journal of the European Histamine Research Society ... [et al.]", "2012 Nov", "Fang X, Hu H, Xie J, Zhu H, Zhang D, Mo W, Zhang R, Yu M" ], [ "P62501-1", "21791611", "TSC-22 promotes transforming growth factor beta-mediated cardiac myofibroblast differentiation by antagonizing Smad7 activity.", "Molecular and cellular biology", "2011 Sep", "Yan X, Zhang J, Pan L, Wang P, Xue H, Zhang L, Gao X, Zhao X, Ning Y, Chen YG" ], [ "Q78EH2-1", "21080038", "The precursor to the germ cell-specific PCSK4 proteinase is inefficiently activated in transfected somatic cells: evidence of interaction with the BiP chaperone.", "Molecular and cellular biochemistry", "2011 Feb", "Gyamera-Acheampong C, Sirois F, Denis NJ, Mishra P, Figeys D, Basak A, Mbikay M" ], [ "Q5XII0-1", "16954209", "Demonstration of lysosomal localization for the mammalian ependymin-related protein using classical approaches combined with a novel density shift method.", "The Journal of biological chemistry", "2006 Nov 17", "Della Valle MC, Sleat DE, Sohar I, Wen T, Pintar JE, Jadot M, Lobel P" ], [ "D4A6X3-1", "25961457", "KANK deficiency leads to podocyte dysfunction and nephrotic syndrome.", "The Journal of clinical investigation", "2015 Jun", "Gee HY, Zhang F, Ashraf S, Kohl S, Sadowski CE, Vega-Warner V, Zhou W, Lovric S, Fang H, Nettleton M, Zhu JY, Hoefele J, Weber LT, Podracka L, Boor A, Fehrenbach H, Innis JW, Washburn J, Levy S, Lifton RP, Otto EA, Han Z, Hildebrandt F" ], [ "Q6J1Y9-1", "25568336", "USP19 deubiquitinating enzyme inhibits muscle cell differentiation by suppressing unfolded-protein response signaling.", "Molecular biology of the cell", "2015 Mar 1", "Wiles B, Miao M, Coyne E, Larose L, Cybulsky AV, Wing SS" ], [ "Q6J1Y9-1", "19015242", "USP19 deubiquitinating enzyme supports cell proliferation by stabilizing KPC1, a ubiquitin ligase for p27Kip1.", "Molecular and cellular biology", "2009 Jan", "Lu Y, Adegoke OA, Nepveu A, Nakayama KI, Bedard N, Cheng D, Peng J, Wing SS" ], [ "Q812E9-1", "27793698", "Evidence for a role of glycoprotein M6a in dendritic spine formation and synaptogenesis.", "Molecular and cellular neurosciences", "2016 Dec", "Formoso K, Garcia MD, Frasch AC, Scorticati C" ], [ "Q812E9-1", "26809475", "Neuronal filopodium formation induced by the membrane glycoprotein M6a (Gpm6a) is facilitated by coronin-1a, Rac1, and p21-activated kinase 1 (Pak1).", "Journal of neurochemistry", "2016 Apr", "Alvarez Julia A, Frasch AC, Fuchsova B" ], [ "Q812E9-1", "25940868", "Filopodia formation driven by membrane glycoprotein M6a depends on the interaction of its transmembrane domains.", "Journal of neurochemistry", "2015 Aug", "Formoso K, Garcia MD, Frasch AC, Scorticati C" ], [ "Q812E9-1", "23959066", "Prenatal stress changes the glycoprotein GPM6A gene expression and induces epigenetic changes in rat offspring brain.", "Epigenetics", "2014 Jan", "Monteleone MC, Adrover E, Pallares ME, Antonelli MC, Frasch AC, Brocco MA" ], [ "Q812E9-1", "18241840", "Glycoprotein M6a is present in glutamatergic axons in adult rat forebrain and cerebellum.", "Brain research", "2008 Mar 4", "Cooper B, Werner HB, Flugge G" ], [ "Q812E9-1", "16286650", "The stress-regulated protein M6a is a key modulator for neurite outgrowth and filopodium/spine formation.", "Proceedings of the National Academy of Sciences of the United States of America", "2005 Nov 22", "Alfonso J, Fernandez ME, Cooper B, Flugge G, Frasch AC" ], [ "Q812E9-1", "12359212", "M6a acts as a nerve growth factor-gated Ca(2+) channel in neuronal differentiation.", "Biochemical and biophysical research communications", "2002 Oct 4", "Mukobata S, Hibino T, Sugiyama A, Urano Y, Inatomi A, Kanai Y, Endo H, Tashiro F" ], [ "P09739-1", "21490260", "Body weight-dependent troponin T alternative splicing is evolutionarily conserved from insects to mammals and is partially impaired in skeletal muscle of obese rats.", "The Journal of experimental biology", "2011 May 1", "Schilder RJ, Kimball SR, Marden JH, Jefferson LS" ], [ "Q9P290-1", "30404645", "Tonicity inversely modulates lipocalin-2 (Lcn2/24p3/NGAL) receptor (SLC22A17) and Lcn2 expression via Wnt/beta-catenin signaling in renal inner medullary collecting duct cells: implications for cell fate and bacterial infection.", "Cell communication and signaling : CCS", "2018 Nov 7", "Betten R, Scharner B, Probst S, Edemir B, Wolff NA, Langelueddecke C, Lee WK, Thevenod F" ], [ "Q9P290-1", "22084236", "Lipocalin-2 (24p3/neutrophil gelatinase-associated lipocalin (NGAL)) receptor is expressed in distal nephron and mediates protein endocytosis.", "The Journal of biological chemistry", "2012 Jan 2", "Langelueddecke C, Roussa E, Fenton RA, Wolff NA, Lee WK, Thevenod F" ], [ "B5MEV3-1", "18632736", "Identification and functional characterization of a novel human and rat riboflavin transporter, RFT1.", "American journal of physiology. Cell physiology", "2008 Sep", "Yonezawa A, Masuda S, Katsura T, Inui K" ], [ "P32198-1", "28993954", "Obesity-alleviating potential of asiatic acid and its effects on ACC1, UCP2, and CPT1 mRNA expression in high fat diet-induced obese Sprague-Dawley rats.", "Molecular and cellular biochemistry", "2018 May", "Rameshreddy P, Uddandrao VVS, Brahmanaidu P, Vadivukkarasi S, Ravindarnaik R, Suresh P, Swapna K, Kalaivani A, Parvathi P, Tamilmani P, Saravanan G" ], [ "Q80ZC8-1", "18713988", "KLRE/I1 and KLRE/I2: a novel pair of heterodimeric receptors that inversely regulate NK cell cytotoxicity.", "Journal of immunology (Baltimore, Md. : 1950)", "2008 Sep 1", "Saether PC, Westgaard IH, Hoelsbrekken SE, Benjamin J, Lanier LL, Fossum S, Dissen E" ], [ "Q80ZC8-1", "12782717", "The lectin-like receptor KLRE1 inhibits natural killer cell cytotoxicity.", "The Journal of experimental medicine", "2003 Jun 2", "Westgaard IH, Dissen E, Torgersen KM, Lazetic S, Lanier LL, Phillips JH, Fossum S" ], [ "P84060-1", "20530487", "The interaction with HMG20a/b proteins suggests a potential role for beta-dystrobrevin in neuronal differentiation.", "The Journal of biological chemistry", "2010 Aug 6", "Artegiani B, Labbaye C, Sferra A, Quaranta MT, Torreri P, Macchia G, Ceccarini M, Petrucci TC, Macioce P" ], [ "P11980-1", "26774701", "Inhibition of pyruvate kinase M2 by reactive oxygen species contributes to the development of pulmonary arterial hypertension.", "Journal of molecular and cellular cardiology", "2016 Feb", "Guo D, Gu J, Jiang H, Ahmed A, Zhang Z, Gu Y" ], [ "Q5U2W9-1", "17565281", "Renalase, a new renal hormone: its role in health and disease.", "Current opinion in nephrology and hypertension", "2007 Jul", "Xu J, Desir GV" ], [ "Q5ECL0-1", "29029788", "Differential Ca(2+) mobilization and mast cell degranulation by FcepsilonRI- and GPCR-mediated signaling.", "Cell calcium", "2017 Nov", "Chen YC, Chang YC, Chang HA, Lin YS, Tsao CW, Shen MR, Chiu WT" ], [ "Q80WF4-1", "12514190", "Cloning and characterization of a novel GRP78-binding protein in the rat brain.", "The Journal of biological chemistry", "2003 Mar 21", "Oh-hashi K, Naruse Y, Amaya F, Shimosato G, Tanaka M" ], [ "P97829-1", "27960187", "RNAi-Mediated Down-Regulation of CD47 Protects against Ischemia/Reperfusion-Induced Myocardial Damage via Activation of eNOS in a Rat Model.", "Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology", "2016", "Wang HB, Yang J, Ding JW, Chen LH, Li S, Liu XW, Yang CJ, Fan ZX, Yang J" ], [ "P97829-1", "26617765", "Bone marrow mesenchymal stromal cells with CD47 high expression via the signal transducer and activators of transcription signaling pathway preventing myocardial fibrosis.", "International journal of clinical and experimental pathology", "2015", "Deng W, Chen QW, Li XS, Yuan ZM, Li GQ, Ke DZ, Wang L, Wu ZQ, Luo SL" ] ] }, "readme": "Name\n - Rat Protein Citations (RefSeq)\n\nVersion\n - 1.5.13\n\nCreated on\n - 2019-09-06T14:06:38.990766\n\nModified on\n - 2019-12-01T15:07:50.725476\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n - \n\nUsability Domain\n - The Rat Protein Citations (RefSeq) datasets contains rat [taxid:10116] UniProtKB accessions mapped to publication information (pmid, title, journal name, publication, date, authors of corresponding RefSeq accessions. The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen\n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - RefSeq\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the NCBI RefSeq gpff files to extract the publication information. The script also maps RefSeq accesion to the UniProtKB Canonical accessions\n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: refseq_protein_all_10116.gpff\n URI: https://data.glygen.org/ln2data/releases/data/v-1.5.13/source/refseq_protein_all_10116.gpff\n Name: rat_protein_xref_refseq.csv\n URI: https://data.glygen.org/ln2data/releases/data/v-1.5.13/reviewed/rat_protein_xref_refseq.csv\n Output Subdomain\n Name: rat_protein_citations_refseq.csv\n URI: http://data.glygen.org/ln2data/releases/data/v-1.5.13/reviewed/rat_protein_citations_refseq.csv\n Name: rat_protein_citations_refseq.stat.csv\n URI: http://data.glygen.org/ln2data/releases/data/v-1.5.13/reviewed/rat_protein_citations_refseq.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"Accession assigned to the protein isoform chosen to be the canonical sequence to which all positional annotation refers in UniProtKB database\"\n Unique Values: \"1080\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"1626\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"420\"\n Name: \"authors\"\n Description: \"\"\n Unique Values: \"1622\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"945\"\n Name: \"pmid\"\n Description: \"NCBI PubMed database Identifier\"\n Unique Values: \"1626\"", "downloadurl": "/ln2data/releases/data/v-1.5.13/reviewed/rat_protein_citations_refseq.csv" }