{ "bcoid": "GLY_000138", "title": "Human Proteoform Citations (UniCarbKB)", "description": "The Human Proteoform Citations (UniCarbKB) contains human [taxid:9606] publication information of glycoproteins ...", "filename": "human_proteoform_citations_unicarbkb.csv", "filetype": "csv", "categories": { "species": "Homo Sapiens", "molecule": "Proteoform", "tags": "Protein Citations", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "P02790-1...", "24841998..." ], [ "Q9Y4L1-1...", "29741879..." ] ], "headers": [ "uniprotkb_ca...", "pmid..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "pmid" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" } ], [ "P02790-1", "24841998", "Comparison of sialylated N-glycopeptide levels in serum of pancreatic cancer patients, acute pancreatitis patients, and healthy controls.", "Proteomics", "2014 Aug", "Kontro H, Joenvaara S, Haglund C, Renkonen R" ], [ "Q9Y4L1-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P01009-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P27169-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P19652-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P01019-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P01009-1", "6966283", "Studies on the oligosaccharide chains of human alpha 1-protease inhibitor. II. Structure of oligosaccharides.", "The Journal of biological chemistry", "1980 May 10", "Mega T, Lujan E, Yoshida A" ], [ "P19827-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "Q99715-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P19823-1", "22171320", "Human urinary glycoproteomics; attachment site specific analysis of N- and O-linked glycosylations by CID and ECD.", "Molecular & cellular proteomics : MCP", "2012 Apr", "Halim A, Nilsson J, Ruetschi U, Hesse C, Larson G" ], [ "P01588-1", "3179269", "Comparative structural study of N-linked oligosaccharides of urinary and recombinant erythropoietins.", "Biochemistry", "1988 Jul 26", "Tsuda E, Goto M, Murakami A, Akai K, Ueda M, Kawanishi G, Takahashi N, Sasaki R, Chiba H, Ishihara H, et al." ], [ "P05154-1", "26791533", "N-Glycoproteomics of Human Seminal Plasma Glycoproteins.", "Journal of proteome research", "2016 Mar 4", "Saraswat M, Joenvaara S, Tomar AK, Singh S, Yadav S, Renkonen R" ], [ "P25311-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P10909-1", "26791533", "N-Glycoproteomics of Human Seminal Plasma Glycoproteins.", "Journal of proteome research", "2016 Mar 4", "Saraswat M, Joenvaara S, Tomar AK, Singh S, Yadav S, Renkonen R" ], [ "P08603-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P06756-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P01588-1", "8460945", "Structures of mucin-type sugar chains on human erythropoietins purified from urine and the culture medium of recombinant Chinese hamster ovary cells.", "Archives of biochemistry and biophysics", "1993 Mar", "Inoue N, Takeuchi M, Asano K, Shimizu R, Takasaki S, Kobata A" ], [ "P02763-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "O43166-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P01876-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P00738-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P02787-1", "10929010", "N-glycan patterns of human transferrin produced in Trichoplusia ni insect cells: effects of mammalian galactosyltransferase.", "Glycobiology", "2000 Aug", "Ailor E, Takahashi N, Tsukamoto Y, Masuda K, Rahman BA, Jarvis DL, Lee YC, Betenbaugh MJ" ], [ "P16150-1", "2943741", "Structural variations of O-linked oligosaccharides present in leukosialin isolated from erythroid, myeloid, and T-lymphoid cell lines.", "The Journal of biological chemistry", "1986 Sep 25", "Carlsson SR, Sasaki H, Fukuda M" ], [ "P05155-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P51884-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P05090-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P01008-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P00734-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P01042-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P04003-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "O00468-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P02787-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P11717-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P01011-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "Q9Y5L3-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P01215-1", "9449027", "Carbohydrate and peptide structure of the alpha- and beta-subunits of human chorionic gonadotropin from normal and aberrant pregnancy and choriocarcinoma.", "Endocrine", "1997 Aug", "Elliott MM, Kardana A, Lustbader JW, Cole LA" ], [ "P12110-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P0C0L4-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "Q5H9R7-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "O75718-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P02790-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "Q9UBP4-1", "23234360", "LC-MS/MS characterization of O-glycosylation sites and glycan structures of human cerebrospinal fluid glycoproteins.", "Journal of proteome research", "2013 Feb 1", "Halim A, Ruetschi U, Larson G, Nilsson J" ], [ "Q5VXJ0-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P02788-1", "7774715", "Structural determination of two N-linked glycans isolated from recombinant human lactoferrin expressed in BHK cells.", "FEBS letters", "1995 May 22", "Legrand D, Salmon V, Coddeville B, Benaissa M, Plancke Y, Spik G" ], [ "O14657-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P05546-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P00450-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P01871-1", "24766575", "Efficient and accurate glycopeptide identification pipeline for high-throughput site-specific N-glycosylation analysis.", "Journal of proteome research", "2014 Jun 6", "Liu M, Zhang Y, Chen Y, Yan G, Shen C, Cao J, Zhou X, Liu X, Zhang L, Shen H, Lu H, He F, Yang P" ], [ "P07911-1", "9884403", "Glycosylation sites and site-specific glycosylation in human Tamm-Horsfall glycoprotein.", "Glycobiology", "1999 Jan", "van Rooijen JJ, Voskamp AF, Kamerling JP, Vliegenthart JF" ], [ "P05556-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P21810-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "Q14624-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P03956-1", "10092871", "N-glycan structures of matrix metalloproteinase-1 derived from human fibroblasts and from HT-1080 fibrosarcoma cells.", "European journal of biochemistry", "1999 Feb", "Saarinen J, Welgus HG, Flizar CA, Kalkkinen N, Helin J" ], [ "Q08380-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P11117-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P10909-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P35354-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P01215-1", "1991473", "NMR investigations of the N-linked oligosaccharides at individual glycosylation sites of human lutropin.", "European journal of biochemistry", "1991 Jan 1", "Weisshaar G, Hiyama J, Renwick AG, Nimtz M" ], [ "P59541-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P01871-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P02749-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "Q96HE7-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P01860-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P24821-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P17050-1", "10704524", "Human alpha-N-acetylgalactosaminidase: site occupancy and structure of N-linked oligosaccharides.", "Glycobiology", "2000 Mar", "Ohta M, Ohnishi T, Ioannou YA, Hodgson ME, Matsuura F, Desnick RJ" ], [ "Q13740-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P00750-1", "2513186", "Carbohydrate structure of recombinant human uterine tissue plasminogen activator expressed in mouse epithelial cells.", "European journal of biochemistry", "1989 Dec 8", "Pfeiffer G, Schmidt M, Strube KH, Geyer R" ], [ "O94925-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "Q96AY3-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P43307-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P25311-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "Q9NYQ6-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P19835-1", "10024660", "Structural characterization of the N-linked oligosaccharides in bile salt-stimulated lipase originated from human breast milk.", "Glycobiology", "1999 Mar", "Mechref Y, Chen P, Novotny MV" ], [ "P13473-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P03956-1", "23345538", "Glycoproteomic analysis of the secretome of human endothelial cells.", "Molecular & cellular proteomics : MCP", "2013 Apr", "Yin X, Bern M, Xing Q, Ho J, Viner R, Mayr M" ], [ "Q92896-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P07911-1", "22171320", "Human urinary glycoproteomics; attachment site specific analysis of N- and O-linked glycosylations by CID and ECD.", "Molecular & cellular proteomics : MCP", "2012 Apr", "Halim A, Nilsson J, Ruetschi U, Hesse C, Larson G" ], [ "P59542-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P04114-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "P02763-1", "19838169", "Enrichment of glycopeptides for glycan structure and attachment site identification.", "Nature methods", "2009 Nov", "Nilsson J, Ruetschi U, Halim A, Hesse C, Carlsohn E, Brinkmalm G, Larson G" ], [ "Q8NBJ5-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ], [ "P07225-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "Q02985-1", "29671580", "Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and alpha-1B-Glycoprotein.", "Analytical chemistry", "2018 May 15", "Sun S, Hu Y, Jia L, Eshghi ST, Liu Y, Shah P, Zhang H" ], [ "Q96D15-1", "29741879", "Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides.", "Analytical chemistry", "2018 Jul 3", "Hu Y, Shah P, Clark DJ, Ao M, Zhang H" ] ] }, "readme": "Name\n - Human Proteoform Citations (UniCarbKB)\n\nVersion\n - 1.5.12\n\nCreated on\n - 2019-04-16T16:31:37.511217\n\nModified on\n - 2019-11-27T15:46:19.767029\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n - \n\nUsability Domain\n - The Human Proteoform Citations (UniCarbKB) contains human [taxid:9606] publication information of glycoproteins from UniCarbKB. The script accesses the NCBI ENTREZ infrastructure to retrieve the publication information of the given PMID from UniCarbKB. The dataset is contributed by UniCarbKB and processed by GlyGen. If you use this dataset please provide proper attribution to UniCarbKB and GlyGen [UniCarbKB - https://academic.oup.com/nar/article/42/D1/D215/1052197 ,https://doi.org/10.1093/nar/gkt1128]\n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - UniCarbKB\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the input file for PMIDs and accesses the NCBI Entrez infrastructure to download the publication information of the corresponding PMIDs\n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-proteoform-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: human_proteoform_glycosylation_sites_unicarbkb.csv\n URI: https://data.glygen.org/ln2wwwdata/reviewed/human_proteoform_glycosylation_sites_unicarbkb.csv\n Output Subdomain\n Name: human_proteoform_citations_unicarbkb.csv\n URI: http://data.glygen.org/ln2wwwdata/reviewed/human_proteoform_citations_unicarbkb.csv\n Name: human_proteoform_citations_unicarbkb.stat.csv\n URI: http://data.glygen.org/ln2wwwdata/reviewed/human_proteoform_citations_unicarbkb.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"Accession assigned to the protein isoform chosen to be the canonical sequence to which all positional annotation refers in UniProtKB database\"\n Unique Values: \"621\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"118\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"32\"\n Name: \"authors\"\n Description: \"\"\n Unique Values: \"116\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"112\"\n Name: \"pmid\"\n Description: \"NCBI PubMed database Identifier\"\n Unique Values: \"118\"", "downloadurl": "/ln2data/releases/data/v-1.5.12/reviewed/human_proteoform_citations_unicarbkb.csv" }